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From tm...@apache.org
Subject svn commit: r1477355 - in /ctakes/trunk/ctakes-assertion-res/src/main/resources/org/apache/ctakes/assertion/cue_words: ./ conditional.psv hypothetical.psv negation_cue_class.psv not_patient_cue_list.psv speculation.psv
Date Mon, 29 Apr 2013 21:29:48 GMT
Author: tmill
Date: Mon Apr 29 21:29:47 2013
New Revision: 1477355

URL: http://svn.apache.org/r1477355
Log:
Cue word files for generating lucene index of cue words.

Added:
    ctakes/trunk/ctakes-assertion-res/src/main/resources/org/apache/ctakes/assertion/cue_words/
    ctakes/trunk/ctakes-assertion-res/src/main/resources/org/apache/ctakes/assertion/cue_words/conditional.psv
    ctakes/trunk/ctakes-assertion-res/src/main/resources/org/apache/ctakes/assertion/cue_words/hypothetical.psv
    ctakes/trunk/ctakes-assertion-res/src/main/resources/org/apache/ctakes/assertion/cue_words/negation_cue_class.psv
    ctakes/trunk/ctakes-assertion-res/src/main/resources/org/apache/ctakes/assertion/cue_words/not_patient_cue_list.psv
    ctakes/trunk/ctakes-assertion-res/src/main/resources/org/apache/ctakes/assertion/cue_words/speculation.psv

Added: ctakes/trunk/ctakes-assertion-res/src/main/resources/org/apache/ctakes/assertion/cue_words/conditional.psv
URL: http://svn.apache.org/viewvc/ctakes/trunk/ctakes-assertion-res/src/main/resources/org/apache/ctakes/assertion/cue_words/conditional.psv?rev=1477355&view=auto
==============================================================================
--- ctakes/trunk/ctakes-assertion-res/src/main/resources/org/apache/ctakes/assertion/cue_words/conditional.psv
(added)
+++ ctakes/trunk/ctakes-assertion-res/src/main/resources/org/apache/ctakes/assertion/cue_words/conditional.psv
Mon Apr 29 21:29:47 2013
@@ -0,0 +1,13 @@
+on exertion|conditional|conditional
+on exercise|conditional|conditional
+with exertion|conditional|conditional
+with exercise|conditional|conditional
+exertional|conditional|conditional
+allergy|conditional|conditional
+allergies|conditional|conditional
+allergic to|conditional|conditional
+intolerance|conditional|conditional
+after|conditional|conditional
+post|conditional|conditional
+while|conditional|conditional
+when|conditional|conditional

Added: ctakes/trunk/ctakes-assertion-res/src/main/resources/org/apache/ctakes/assertion/cue_words/hypothetical.psv
URL: http://svn.apache.org/viewvc/ctakes/trunk/ctakes-assertion-res/src/main/resources/org/apache/ctakes/assertion/cue_words/hypothetical.psv?rev=1477355&view=auto
==============================================================================
--- ctakes/trunk/ctakes-assertion-res/src/main/resources/org/apache/ctakes/assertion/cue_words/hypothetical.psv
(added)
+++ ctakes/trunk/ctakes-assertion-res/src/main/resources/org/apache/ctakes/assertion/cue_words/hypothetical.psv
Mon Apr 29 21:29:47 2013
@@ -0,0 +1,38 @@
+avoid|hypothetical|hypothetical
+avoiding|hypothetical|hypothetical
+avoidance|hypothetical|hypothetical
+if|hypothetical|hypothetical
+unless|hypothetical|hypothetical
+monitor for|hypothetical|hypothetical
+monitors for|hypothetical|hypothetical
+monitored for|hypothetical|hypothetical
+monitoring for|hypothetical|hypothetical
+prn|hypothetical|hypothetical
+PRN|hypothetical|hypothetical
+p.r.n.|hypothetical|hypothetical
+P.R.N.|hypothetical|hypothetical
+as needed for|hypothetical|hypothetical
+as necessary for |hypothetical|hypothetical
+call for|hypothetical|hypothetical
+call with|hypothetical|hypothetical
+return for|hypothetical|hypothetical
+return with|hypothetical|hypothetical
+return|hypothetical|hypothetical
+watch for|hypothetical|hypothetical
+report new|hypothetical|hypothetical
+potential|hypothetical|hypothetical
+potentially|hypothetical|hypothetical
+instructions for|hypothetical|hypothetical
+prevent|hypothetical|hypothetical
+preventing|hypothetical|hypothetical
+prevention|hypothetical|hypothetical
+risk|hypothetical|hypothetical
+risk stratification for|hypothetical|hypothetical
+future|hypothetical|hypothetical
+immunization against|hypothetical|hypothetical
+should|hypothetical|hypothetical
+should he experience|hypothetical|hypothetical
+should she experience|hypothetical|hypothetical
+should the patient experience|hypothetical|hypothetical
+prophylaxis|hypothetical|hypothetical
+prophylactic|hypothetical|hypothetical

Added: ctakes/trunk/ctakes-assertion-res/src/main/resources/org/apache/ctakes/assertion/cue_words/negation_cue_class.psv
URL: http://svn.apache.org/viewvc/ctakes/trunk/ctakes-assertion-res/src/main/resources/org/apache/ctakes/assertion/cue_words/negation_cue_class.psv?rev=1477355&view=auto
==============================================================================
--- ctakes/trunk/ctakes-assertion-res/src/main/resources/org/apache/ctakes/assertion/cue_words/negation_cue_class.psv
(added)
+++ ctakes/trunk/ctakes-assertion-res/src/main/resources/org/apache/ctakes/assertion/cue_words/negation_cue_class.psv
Mon Apr 29 21:29:47 2013
@@ -0,0 +1,149 @@
+not|not|negation
+n't|not|negation
+'t|not|negation
+didn't|not|negation
+doesn't|not|negation
+don't|not|negation
+isn't|not|negation
+aren't|not|negation
+wasn't|not|negation
+weren't|not|negation
+hadn't|not|negation
+hasn't|not|negation
+haven't|not|negation
+won't|not|negation
+wouldn't|not|negation
+never|not|negation
+no longer|not|negation
+in no way|not|negation
+neither|neither|negation
+nor|neither|negation
+none|none|negation
+nobody|none|negation
+no one|none|negation
+nowhere|none|negation
+no place|none|negation
+no|no|negation
+without|no|negation
+absence of|no|negation
+free of|no|negation
+clear of|no|negation
+clear to|no|negation
+negative for|no|negation
+neg for|no|negation
+negative for|no|negation
+unremarkable for|no|negation
+unassociated with|no|negation
+( - )|no|negation
+non|no|negation
+lack of|no|negation
+lack|no|negation
+lacked|no|negation
+lacks|no|negation
+lacking|no|negation
+impossible|fail|negation
+cannot|fail|negation
+can't|fail|negation
+couldn't|fail|negation
+inability|fail|negation
+unable|fail|negation
+forget|fail|negation
+forgets|fail|negation
+forgetting|fail|negation
+forgot|fail|negation
+forgotten|fail|negation
+fail|fail|negation
+failed|fail|negation
+failing|fail|negation
+fails|fail|negation
+failure|fail|negation
+free of|absent|negation
+free|absent|negation
+absent|absent|negation
+immune to|absent|negation
+denied|deny|negation
+denies|deny|negation
+deny|deny|negation
+denying|deny|negation
+avoided|avoid|negation
+avoids|avoid|negation
+prevented|avoid|negation
+prevents|avoid|negation
+prophylaxis against|avoid|negation
+shouldn't|avoid|negation
+mustn't|avoid|negation
+unwilling|decline|negation
+unwillingness|decline|negation
+reluctance|decline|negation
+reluctant|decline|negation
+decline|decline|negation
+declined|decline|negation
+declines|decline|negation
+declining|decline|negation
+refusal|decline|negation
+refuse|decline|negation
+refused|decline|negation
+refuses|decline|negation
+refusing|decline|negation
+excluded|ruleout|negation
+excludes|ruleout|negation
+ruled out|ruleout|negation
+rules out|ruleout|negation
+discontinuance|stop|negation
+discontinuation|stop|negation
+discontinue|stop|negation
+discontinued|stop|negation
+discontinues|stop|negation
+discontinuing|stop|negation
+quit|stop|negation
+quits|stop|negation
+quitting|stop|negation
+stop|stop|negation
+stopped|stop|negation
+stopping|stop|negation
+stops|stop|negation
+used to|stop|negation
+held|stop|negation
+hold|stop|negation
+holding|stop|negation
+holds|stop|negation
+on hold|stop|negation
+off|stop|negation
+elimination|stop|negation
+eliminate|stop|negation
+eliminated|stop|negation
+eliminates|stop|negation
+eliminating|stop|negation
+eradication|stop|negation
+eradicate|stop|negation
+eradicated|stop|negation
+eradicates|stop|negation
+eradicating|stop|negation
+removal|stop|negation
+remove|stop|negation
+removed|stop|negation
+removes|stop|negation
+removing|stop|negation
+purge|stop|negation
+purged|stop|negation
+purges|stop|negation
+purging|stop|negation
+wipe out|stop|negation
+wiped out|stop|negation
+wipes out|stop|negation
+wiping out|stop|negation
+rid|stop|negation
+interrupt|stop|negation
+interruption|stop|negation
+interruptions|stop|negation
+resolved|disappear|negation
+resolution|disappear|negation
+disappeared|disappear|negation
+disappearance|disappear|negation
+rather than|exception|negation
+instead of|exception|negation
+except|exception|negation
+exception|exception|negation
+besides|exception|negation
+aside from|exception|negation
+other than|exception|negation

Added: ctakes/trunk/ctakes-assertion-res/src/main/resources/org/apache/ctakes/assertion/cue_words/not_patient_cue_list.psv
URL: http://svn.apache.org/viewvc/ctakes/trunk/ctakes-assertion-res/src/main/resources/org/apache/ctakes/assertion/cue_words/not_patient_cue_list.psv?rev=1477355&view=auto
==============================================================================
--- ctakes/trunk/ctakes-assertion-res/src/main/resources/org/apache/ctakes/assertion/cue_words/not_patient_cue_list.psv
(added)
+++ ctakes/trunk/ctakes-assertion-res/src/main/resources/org/apache/ctakes/assertion/cue_words/not_patient_cue_list.psv
Mon Apr 29 21:29:47 2013
@@ -0,0 +1,56 @@
+mother|not_patient|not_patient
+father|not_patient|not_patient
+parent|not_patient|not_patient
+parents|not_patient|not_patient
+sister|not_patient|not_patient
+sisters|not_patient|not_patient
+brother|not_patient|not_patient
+brothers|not_patient|not_patient
+sibling|not_patient|not_patient
+siblings|not_patient|not_patient
+grandfather|not_patient|not_patient
+grandfathers|not_patient|not_patient
+grandmother|not_patient|not_patient
+grandmothers|not_patient|not_patient
+cousin|not_patient|not_patient
+cousins|not_patient|not_patient
+aunt|not_patient|not_patient
+aunts|not_patient|not_patient
+uncle|not_patient|not_patient
+uncles|not_patient|not_patient
+stepfather|not_patient|not_patient
+stepmother|not_patient|not_patient
+cousin|not_patient|not_patient
+cousins|not_patient|not_patient
+niece|not_patient|not_patient
+nieces|not_patient|not_patient
+nephew|not_patient|not_patient
+nephews|not_patient|not_patient
+wife|not_patient|not_patient
+husband|not_patient|not_patient
+spouse|not_patient|not_patient
+partner|not_patient|not_patient
+partners|not_patient|not_patient
+roommate|not_patient|not_patient
+roommates|not_patient|not_patient
+classmate|not_patient|not_patient
+classmates|not_patient|not_patient
+friend|not_patient|not_patient
+friends|not_patient|not_patient
+acquaintance|not_patient|not_patient
+acquaintances|not_patient|not_patient
+individual|not_patient|not_patient
+individuals|not_patient|not_patient
+person|not_patient|not_patient
+persons|not_patient|not_patient
+relative|not_patient|not_patient
+relatives|not_patient|not_patient
+family|not_patient|not_patient
+family member|not_patient|not_patient
+family members|not_patient|not_patient
+familiy history of |not_patient|not_patient
+fhx of|not_patient|not_patient
+fam hx of|not_patient|not_patient
+family hx|not_patient|not_patient
+twin|not_patient|not_patient
+familial|not_patient|not_patient

Added: ctakes/trunk/ctakes-assertion-res/src/main/resources/org/apache/ctakes/assertion/cue_words/speculation.psv
URL: http://svn.apache.org/viewvc/ctakes/trunk/ctakes-assertion-res/src/main/resources/org/apache/ctakes/assertion/cue_words/speculation.psv?rev=1477355&view=auto
==============================================================================
--- ctakes/trunk/ctakes-assertion-res/src/main/resources/org/apache/ctakes/assertion/cue_words/speculation.psv
(added)
+++ ctakes/trunk/ctakes-assertion-res/src/main/resources/org/apache/ctakes/assertion/cue_words/speculation.psv
Mon Apr 29 21:29:47 2013
@@ -0,0 +1,194 @@
+uncertain|speculation_mid|speculation
+unsure|speculation_mid|speculation
+improbable|speculation_low|speculation
+unlikely|speculation_low|speculation
+doubtful|speculation_low|speculation
+doubt|speculation_low|speculation
+doubted|speculation_low|speculation
+doubting|speculation_low|speculation
+doubts|speculation_low|speculation
+possible|speculation_mid|speculation
+poss|speculation_mid|speculation
+hypothetical|speculation_mid|speculation
+questionable|speculation_mid|speculation
+consistent with|speculation_mid|speculation
+compatible with|speculation_mid|speculation
+equivocal for|speculation_mid|speculation
+suspicious for|speculation_mid|speculation
+potential|speculation_mid|speculation
+concerned for|speculation_mid|speculation
+concerning for|speculation_mid|speculation
+worrisome for|speculation_mid|speculation
+unclear|speculation_mid|speculation
+unknown|speculation_mid|speculation
+possibly|speculation_mid|speculation
+potentially|speculation_mid|speculation
+maybe|speculation_mid|speculation
+perhaps|speculation_mid|speculation
+possibilities|speculation_mid|speculation
+possibility|speculation_mid|speculation
+evidence for|speculation_mid|speculation
+evidence of|speculation_mid|speculation
+speculation|speculation_mid|speculation
+consideration|speculation_mid|speculation
+?|speculation_mid|speculation
+ddx|speculation_mid|speculation
+differential diagnosis|speculation_mid|speculation
+differential diagnoses|speculation_mid|speculation
+believe|speculation_high|speculation
+believed|speculation_high|speculation
+believes|speculation_high|speculation
+believing|speculation_high|speculation
+consider|speculation_mid|speculation
+considered|speculation_mid|speculation
+considering|speculation_mid|speculation
+considers|speculation_mid|speculation
+t/c|speculation_mid|speculation
+entertain|speculation_mid|speculation
+entertained|speculation_mid|speculation
+entertaining|speculation_mid|speculation
+entertains|speculation_mid|speculation
+question|speculation_mid|speculation
+questioned|speculation_mid|speculation
+questioning|speculation_mid|speculation
+questions|speculation_mid|speculation
+speculate|speculation_high|speculation
+speculated|speculation_high|speculation
+speculates|speculation_high|speculation
+speculating|speculation_high|speculation
+can|speculation_mid|speculation
+could|speculation_mid|speculation
+may|speculation_mid|speculation
+might|speculation_mid|speculation
+whether or not|speculation_mid|speculation
+whether|speculation_mid|speculation
+either|speculation_mid|speculation
+or|speculation_mid|speculation
+if|speculation_mid|speculation
+unless|speculation_low|speculation
+probable	prob_adj
+likely|speculation_high|speculation
+presumed|speculation_high|speculation
+presumptive|speculation_high|speculation
+apparent|speculation_high|speculation
+preliminary|speculation_high|speculation
+putative|speculation_high|speculation
+indicative of|speculation_high|speculation
+suggestive of|speculation_high|speculation
+typical of|speculation_high|speculation
+probably|speculation_high|speculation
+likely|speculation_high|speculation
+presumably|speculation_high|speculation
+apparently|speculation_high|speculation
+reportedly|speculation_high|speculation
+seemingly|speculation_high|speculation
+supposedly|speculation_high|speculation
+must|speculation_high|speculation
+appear|speculation_high|speculation
+appeared|speculation_high|speculation
+appearing|speculation_high|speculation
+appears|speculation_high|speculation
+seem|speculation_high|speculation
+seemed|speculation_high|speculation
+seems|speculation_high|speculation
+seeming|speculation_high|speculation
+estimate|speculation_high|speculation
+estimated|speculation_high|speculation
+estimates|speculation_high|speculation
+estimating|speculation_high|speculation
+feel that|speculation_high|speculation
+feeling that|speculation_high|speculation
+feels that|speculation_high|speculation
+felt that|speculation_high|speculation
+hypothesize|speculation_high|speculation
+hypothesized|speculation_high|speculation
+hypothesizes|speculation_high|speculation
+hypothesizing|speculation_high|speculation
+implied|speculation_high|speculation
+implies|speculation_high|speculation
+imply|speculation_high|speculation
+implying|speculation_high|speculation
+indicate|speculation_high|speculation
+indicated|speculation_high|speculation
+indicates|speculation_high|speculation
+indicating|speculation_high|speculation
+postulate|speculation_high|speculation
+postulated|speculation_high|speculation
+postulating|speculation_high|speculation
+postulates|speculation_high|speculation
+propose|speculation_high|speculation
+proposed|speculation_high|speculation
+proposes|speculation_high|speculation
+proposing|speculation_high|speculation
+suggest|speculation_high|speculation
+suggested|speculation_high|speculation
+suggesting|speculation_high|speculation
+suggests|speculation_high|speculation
+support|speculation_high|speculation
+supported|speculation_high|speculation
+supporting|speculation_high|speculation
+supports|speculation_high|speculation
+suppose|speculation_high|speculation
+supposed|speculation_high|speculation
+supposes|speculation_high|speculation
+supposing|speculation_high|speculation
+suspect|speculation_high|speculation
+suspected|speculation_high|speculation
+suspecting|speculation_high|speculation
+suspects|speculation_high|speculation
+think|speculation_high|speculation
+thinks|speculation_high|speculation
+thinking|speculation_high|speculation
+thought|speculation_high|speculation
+concern for|speculation_high|speculation
+concerns for|speculation_high|speculation
+implication|speculation_high|speculation
+implications|speculation_high|speculation
+impression of|speculation_high|speculation
+indication of|speculation_high|speculation
+indications of|speculation_high|speculation
+suspicion|speculation_high|speculation
+suspicions|speculation_high|speculation
+suggestion|speculation_high|speculation
+suggestions|speculation_high|speculation
+hypothesis|speculation_high|speculation
+hypotheses|speculation_high|speculation
+probability|speculation_high|speculation
+probabilities|speculation_high|speculation
+sign of|speculation_high|speculation
+signs of|speculation_high|speculation
+v.s.|speculation_high|speculation
+versus|speculation_high|speculation
+vs.|speculation_high|speculation
+vs|speculation_high|speculation
+r / o|speculation_mid|speculation
+ro|speculation_mid|speculation
+r/o|speculation_mid|speculation
+rule out|speculation_mid|speculation
+ruling out|speculation_mid|speculation
+rule - out|speculation_mid|speculation
+ruling - out|speculation_mid|speculation
+test for|speculation_mid|speculation
+tested for|speculation_mid|speculation
+testing for|speculation_mid|speculation
+tests for|speculation_mid|speculation
+check for|speculation_mid|speculation
+checked for|speculation_mid|speculation
+checking for|speculation_mid|speculation
+checks for|speculation_mid|speculation
+evaluate for|speculation_mid|speculation
+eval for|speculation_mid|speculation
+evaluated for|speculation_mid|speculation
+evaluates for|speculation_mid|speculation
+evaluating for|speculation_mid|speculation
+evaluation for|speculation_mid|speculation
+assess for|speculation_mid|speculation
+assessment for|speculation_mid|speculation
+monitor for|speculation_mid|speculation
+monitored for|speculation_mid|speculation
+monitoring for|speculation_mid|speculation
+monitors for|speculation_mid|speculation
+seriologies for|speculation_mid|speculation
+seriology for|speculation_mid|speculation
+work up for|speculation_mid|speculation
+workup for|speculation_mid|speculation



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