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From km <srikrishnamo...@gmail.com>
Subject Re: couchdb for genome data
Date Thu, 04 Mar 2010 15:59:03 GMT
BTW, what is the datasize ?

Krishna
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
On Thu, Mar 4, 2010 at 11:59 PM, Tom Sante <tom.sante@gmail.com> wrote:

> On 4/03/10 15:52, Simon Metson wrote:
>
>> Hi,
>>
>>  I will probably use that strategy to partition my data per experiment.
>>>
>>
>> If you have a logical division (say season or month the data was taken
>> in) I'd use that - it'll be easier to work out what your databases hold.
>>
>>  For now I will probably divide per year and per experiment.
>
>
>  And use an external watcher script like in couchdb-lounge to replicate
>>> my common design documents in all databases.
>>>
>>
>> I think I'd use CouchApp for that - means you can easily version your
>> views, too.
>>
>
> I'll take look at both approaches.
> The data gets imported per experiment so I could probably integrate the
> replication of design docs into the import script too.
>
>
>  And store summary data and meta data in a separate database so I can
>>> do easily queries spanning different dbs.
>>>
>>
>> Sounds good. Pulling a view out of all the DB's and into the summary
>> database is pretty simple to do.
>> Cheers
>> Simon
>>
>
>

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