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From st...@apache.org
Subject [08/18] incubator-commonsrdf git commit: COMMONSRDF-39 RDF4JParser in experimental package
Date Wed, 28 Sep 2016 13:50:20 GMT
COMMONSRDF-39 RDF4JParser in experimental package


Project: http://git-wip-us.apache.org/repos/asf/incubator-commonsrdf/repo
Commit: http://git-wip-us.apache.org/repos/asf/incubator-commonsrdf/commit/d9051898
Tree: http://git-wip-us.apache.org/repos/asf/incubator-commonsrdf/tree/d9051898
Diff: http://git-wip-us.apache.org/repos/asf/incubator-commonsrdf/diff/d9051898

Branch: refs/heads/jena-jsonld-rdf4j-integration
Commit: d90518985a6bc886dec31b9b2854367f1fe9ea3c
Parents: cb2a81f
Author: Stian Soiland-Reyes <stain@apache.org>
Authored: Wed Sep 28 14:30:13 2016 +0100
Committer: Stian Soiland-Reyes <stain@apache.org>
Committed: Wed Sep 28 14:30:13 2016 +0100

----------------------------------------------------------------------
 .../commons/rdf/rdf4j/RDF4JParserBuilder.java   | 194 ------------------
 .../rdf/rdf4j/experimental/RDF4JParser.java     | 197 +++++++++++++++++++
 .../rdf/rdf4j/experimental/package-info.java    |  34 ++++
 .../apache/commons/rdf/rdf4j/package-info.java  |   6 +-
 4 files changed, 234 insertions(+), 197 deletions(-)
----------------------------------------------------------------------


http://git-wip-us.apache.org/repos/asf/incubator-commonsrdf/blob/d9051898/rdf4j/src/main/java/org/apache/commons/rdf/rdf4j/RDF4JParserBuilder.java
----------------------------------------------------------------------
diff --git a/rdf4j/src/main/java/org/apache/commons/rdf/rdf4j/RDF4JParserBuilder.java b/rdf4j/src/main/java/org/apache/commons/rdf/rdf4j/RDF4JParserBuilder.java
deleted file mode 100644
index 732112b..0000000
--- a/rdf4j/src/main/java/org/apache/commons/rdf/rdf4j/RDF4JParserBuilder.java
+++ /dev/null
@@ -1,194 +0,0 @@
-/**
- * Licensed to the Apache Software Foundation (ASF) under one
- * or more contributor license agreements. See the NOTICE file
- * distributed with this work for additional information
- * regarding copyright ownership. The ASF licenses this file
- * to you under the Apache License, Version 2.0 (the
- * "License"); you may not use this file except in compliance
- * with the License.  You may obtain a copy of the License at
- *
- *     http://www.apache.org/licenses/LICENSE-2.0
- *
- * Unless required by applicable law or agreed to in writing, software
- * distributed under the License is distributed on an "AS IS" BASIS,
- * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
- * See the License for the specific language governing permissions and
- * limitations under the License.
- */
-package org.apache.commons.rdf.rdf4j;
-
-import java.io.IOException;
-import java.io.InputStream;
-import java.net.MalformedURLException;
-import java.net.URL;
-import java.nio.file.Files;
-import java.nio.file.Path;
-import java.util.Optional;
-import java.util.function.Consumer;
-
-import org.apache.commons.rdf.api.IRI;
-import org.apache.commons.rdf.api.Quad;
-import org.apache.commons.rdf.api.RDFParserBuilder;
-import org.apache.commons.rdf.api.RDFSyntax;
-import org.apache.commons.rdf.simple.AbstractRDFParserBuilder;
-import org.eclipse.rdf4j.model.Model;
-import org.eclipse.rdf4j.repository.util.RDFInserter;
-import org.eclipse.rdf4j.repository.util.RDFLoader;
-import org.eclipse.rdf4j.rio.ParserConfig;
-import org.eclipse.rdf4j.rio.RDFFormat;
-import org.eclipse.rdf4j.rio.RDFHandler;
-import org.eclipse.rdf4j.rio.RDFHandlerException;
-import org.eclipse.rdf4j.rio.Rio;
-import org.eclipse.rdf4j.rio.helpers.AbstractRDFHandler;
-
-/**
- * RDF4J-based parser.
- * <p>
- * This can handle the RDF syntaxes {@link RDFSyntax#JSONLD},
- * {@link RDFSyntax#NQUADS}, {@link RDFSyntax#NTRIPLES},
- * {@link RDFSyntax#RDFXML}, {@link RDFSyntax#TRIG} and {@link RDFSyntax#TURTLE}
- * - additional syntaxes can be supported by including the corresponding
- * <em>rdf4j-rio-*</em> module on the classpath.
- *
- */
-public class RDF4JParserBuilder extends AbstractRDFParserBuilder<RDF4JParserBuilder>
implements RDFParserBuilder {
-
-	private final class AddToQuadConsumer extends AbstractRDFHandler {
-		private final Consumer<Quad> quadTarget;
-
-		private AddToQuadConsumer(Consumer<Quad> quadTarget) {
-			this.quadTarget = quadTarget;
-		}
-
-		public void handleStatement(org.eclipse.rdf4j.model.Statement st)
-				throws org.eclipse.rdf4j.rio.RDFHandlerException {
-			// TODO: if getRdfTermFactory() is a non-rdf4j factory, should
-			// we use factory.createQuad() instead?
-			// Unsure what is the promise of setting getRdfTermFactory() --
-			// does it go all the way down to creating BlankNode, IRI and
-			// Literal?
-			quadTarget.accept(rdf4jTermFactory.asQuad(st));
-			// Performance note:
-			// Graph/Quad.add should pick up again our
-			// RDF4JGraphLike.asStatement()
-			// and avoid double conversion.
-			// Additionally the RDF4JQuad and RDF4JTriple implementations
-			// are lazily converting subj/obj/pred/graph.s
-		}
-	}
-
-	private final static class AddToModel extends AbstractRDFHandler {
-		private final Model model;
-
-		public AddToModel(Model model) {
-			this.model = model;
-		}
-
-		public void handleStatement(org.eclipse.rdf4j.model.Statement st)
-				throws org.eclipse.rdf4j.rio.RDFHandlerException {
-			model.add(st);
-		}
-
-		@Override
-		public void handleNamespace(String prefix, String uri) throws RDFHandlerException {
-			model.setNamespace(prefix, uri);
-		}
-	}
-
-	private RDF4JTermFactory rdf4jTermFactory;
-
-	@Override
-	protected RDF4JTermFactory createRDFTermFactory() {
-		return new RDF4JTermFactory();
-	}
-
-	@Override
-	protected RDF4JParserBuilder prepareForParsing() throws IOException, IllegalStateException
{
-		RDF4JParserBuilder c = prepareForParsing();
-		// Ensure we have an RDF4JTermFactory for conversion.
-		// We'll make a new one if user has provided a non-RDF4J factory
-		c.rdf4jTermFactory = (RDF4JTermFactory) getRdfTermFactory().filter(RDF4JTermFactory.class::isInstance)
-				.orElseGet(c::createRDFTermFactory);
-		return c;
-	}
-
-	@Override
-	protected void parseSynchronusly() throws IOException {		
-		Optional<RDFFormat> formatByMimeType = getContentType().flatMap(Rio::getParserFormatForMIMEType);
-		String base = getBase().map(IRI::getIRIString).orElse(null);
-				
-		ParserConfig parserConfig = new ParserConfig();
-		// TODO: Should we need to set anything?
-		RDFLoader loader = new RDFLoader(parserConfig, rdf4jTermFactory.getValueFactory());
-		RDFHandler rdfHandler = makeRDFHandler();		
-		if (getSourceFile().isPresent()) {			
-			// NOTE: While we could have used  
-			// loader.load(sourcePath.toFile()
-			// if the path fs provider == FileSystems.getDefault(), 			
-			// that RDFLoader method does not use absolute path
-			// as the base URI, so to be consistent 
-			// we'll always do it with our own input stream
-			//
-			// That means we may have to guess format by extensions:			
-			Optional<RDFFormat> formatByFilename = getSourceFile().map(Path::getFileName).map(Path::toString)
-					.flatMap(Rio::getParserFormatForFileName);
-			// TODO: for the excited.. what about the extension after following symlinks? 
-			
-			RDFFormat format = formatByMimeType.orElse(formatByFilename.orElse(null));
-			try (InputStream in = Files.newInputStream(getSourceFile().get())) {
-				loader.load(in, base, format, rdfHandler);
-			}
-		} else if (getSourceIri().isPresent()) {
-			try {
-				// TODO: Handle international IRIs properly
-				// (Unicode support for for hostname, path and query)
-				URL url = new URL(getSourceIri().get().getIRIString());
-				// TODO: This probably does not support https:// -> http:// redirections
-				loader.load(url, base, formatByMimeType.orElse(null), makeRDFHandler());
-			} catch (MalformedURLException ex) {
-				throw new IOException("Can't handle source URL: " + getSourceIri().get(), ex);
-			}			
-		}
-		// must be getSourceInputStream then, this is guaranteed by super.checkSource(); 		
-		loader.load(getSourceInputStream().get(), base, formatByMimeType.orElse(null), rdfHandler);
-	}
-
-	protected RDFHandler makeRDFHandler() {
-
-		// TODO: Can we join the below DF4JDataset and RDF4JGraph cases
-		// using RDF4JGraphLike<TripleLike<BlankNodeOrIRI,IRI,RDFTerm>>
-		// or will that need tricky generics types?
-
-		if (getTargetDataset().filter(RDF4JDataset.class::isInstance).isPresent()) {
-			// One of us, we can add them as Statements directly
-			RDF4JDataset dataset = (RDF4JDataset) getTargetDataset().get();
-			if (dataset.asRepository().isPresent()) {
-				return new RDFInserter(dataset.asRepository().get().getConnection());
-			}
-			if (dataset.asModel().isPresent()) {
-				Model model = dataset.asModel().get();
-				return new AddToModel(model);
-			}
-			// Not backed by Repository or Model?
-			// Third-party RDF4JDataset subclass, so we'll fall through to the
-			// getTarget() handling further down
-		} else if (getTargetGraph().filter(RDF4JGraph.class::isInstance).isPresent()) {
-			RDF4JGraph graph = (RDF4JGraph) getTargetGraph().get();
-
-			if (graph.asRepository().isPresent()) {
-				RDFInserter inserter = new RDFInserter(graph.asRepository().get().getConnection());
-				graph.getContextFilter().ifPresent(inserter::enforceContext);
-				return inserter;
-			}
-			if (graph.asModel().isPresent() && graph.getContextFilter().isPresent()) {
-				Model model = graph.asModel().get();
-				return new AddToModel(model);
-			}
-			// else - fall through
-		}
-
-		// Fall thorough: let target() consume our converted quads.
-		return new AddToQuadConsumer(getTarget());
-	}
-
-}

http://git-wip-us.apache.org/repos/asf/incubator-commonsrdf/blob/d9051898/rdf4j/src/main/java/org/apache/commons/rdf/rdf4j/experimental/RDF4JParser.java
----------------------------------------------------------------------
diff --git a/rdf4j/src/main/java/org/apache/commons/rdf/rdf4j/experimental/RDF4JParser.java
b/rdf4j/src/main/java/org/apache/commons/rdf/rdf4j/experimental/RDF4JParser.java
new file mode 100644
index 0000000..c185419
--- /dev/null
+++ b/rdf4j/src/main/java/org/apache/commons/rdf/rdf4j/experimental/RDF4JParser.java
@@ -0,0 +1,197 @@
+/**
+ * Licensed to the Apache Software Foundation (ASF) under one
+ * or more contributor license agreements. See the NOTICE file
+ * distributed with this work for additional information
+ * regarding copyright ownership. The ASF licenses this file
+ * to you under the Apache License, Version 2.0 (the
+ * "License"); you may not use this file except in compliance
+ * with the License.  You may obtain a copy of the License at
+ *
+ *     http://www.apache.org/licenses/LICENSE-2.0
+ *
+ * Unless required by applicable law or agreed to in writing, software
+ * distributed under the License is distributed on an "AS IS" BASIS,
+ * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
+ * See the License for the specific language governing permissions and
+ * limitations under the License.
+ */
+package org.apache.commons.rdf.rdf4j.experimental;
+
+import java.io.IOException;
+import java.io.InputStream;
+import java.net.MalformedURLException;
+import java.net.URL;
+import java.nio.file.Files;
+import java.nio.file.Path;
+import java.util.Optional;
+import java.util.function.Consumer;
+
+import org.apache.commons.rdf.api.IRI;
+import org.apache.commons.rdf.api.Quad;
+import org.apache.commons.rdf.api.RDFSyntax;
+import org.apache.commons.rdf.experimental.RDFParser;
+import org.apache.commons.rdf.rdf4j.RDF4JDataset;
+import org.apache.commons.rdf.rdf4j.RDF4JGraph;
+import org.apache.commons.rdf.rdf4j.RDF4JTermFactory;
+import org.apache.commons.rdf.simple.experimental.AbstractRDFParser;
+import org.eclipse.rdf4j.model.Model;
+import org.eclipse.rdf4j.repository.util.RDFInserter;
+import org.eclipse.rdf4j.repository.util.RDFLoader;
+import org.eclipse.rdf4j.rio.ParserConfig;
+import org.eclipse.rdf4j.rio.RDFFormat;
+import org.eclipse.rdf4j.rio.RDFHandler;
+import org.eclipse.rdf4j.rio.RDFHandlerException;
+import org.eclipse.rdf4j.rio.Rio;
+import org.eclipse.rdf4j.rio.helpers.AbstractRDFHandler;
+
+/**
+ * RDF4J-based parser.
+ * <p>
+ * This can handle the RDF syntaxes {@link RDFSyntax#JSONLD},
+ * {@link RDFSyntax#NQUADS}, {@link RDFSyntax#NTRIPLES},
+ * {@link RDFSyntax#RDFXML}, {@link RDFSyntax#TRIG} and {@link RDFSyntax#TURTLE}
+ * - additional syntaxes can be supported by including the corresponding
+ * <em>rdf4j-rio-*</em> module on the classpath.
+ *
+ */
+public class RDF4JParser extends AbstractRDFParser<RDF4JParser> implements RDFParser
{
+
+	private final class AddToQuadConsumer extends AbstractRDFHandler {
+		private final Consumer<Quad> quadTarget;
+
+		private AddToQuadConsumer(Consumer<Quad> quadTarget) {
+			this.quadTarget = quadTarget;
+		}
+
+		public void handleStatement(org.eclipse.rdf4j.model.Statement st)
+				throws org.eclipse.rdf4j.rio.RDFHandlerException {
+			// TODO: if getRdfTermFactory() is a non-rdf4j factory, should
+			// we use factory.createQuad() instead?
+			// Unsure what is the promise of setting getRdfTermFactory() --
+			// does it go all the way down to creating BlankNode, IRI and
+			// Literal?
+			quadTarget.accept(rdf4jTermFactory.asQuad(st));
+			// Performance note:
+			// Graph/Quad.add should pick up again our
+			// RDF4JGraphLike.asStatement()
+			// and avoid double conversion.
+			// Additionally the RDF4JQuad and RDF4JTriple implementations
+			// are lazily converting subj/obj/pred/graph.s
+		}
+	}
+
+	private final static class AddToModel extends AbstractRDFHandler {
+		private final Model model;
+
+		public AddToModel(Model model) {
+			this.model = model;
+		}
+
+		public void handleStatement(org.eclipse.rdf4j.model.Statement st)
+				throws org.eclipse.rdf4j.rio.RDFHandlerException {
+			model.add(st);
+		}
+
+		@Override
+		public void handleNamespace(String prefix, String uri) throws RDFHandlerException {
+			model.setNamespace(prefix, uri);
+		}
+	}
+
+	private RDF4JTermFactory rdf4jTermFactory;
+
+	@Override
+	protected RDF4JTermFactory createRDFTermFactory() {
+		return new RDF4JTermFactory();
+	}
+
+	@Override
+	protected RDF4JParser prepareForParsing() throws IOException, IllegalStateException {
+		RDF4JParser c = prepareForParsing();
+		// Ensure we have an RDF4JTermFactory for conversion.
+		// We'll make a new one if user has provided a non-RDF4J factory
+		c.rdf4jTermFactory = (RDF4JTermFactory) getRdfTermFactory().filter(RDF4JTermFactory.class::isInstance)
+				.orElseGet(c::createRDFTermFactory);
+		return c;
+	}
+
+	@Override
+	protected void parseSynchronusly() throws IOException {		
+		Optional<RDFFormat> formatByMimeType = getContentType().flatMap(Rio::getParserFormatForMIMEType);
+		String base = getBase().map(IRI::getIRIString).orElse(null);
+				
+		ParserConfig parserConfig = new ParserConfig();
+		// TODO: Should we need to set anything?
+		RDFLoader loader = new RDFLoader(parserConfig, rdf4jTermFactory.getValueFactory());
+		RDFHandler rdfHandler = makeRDFHandler();		
+		if (getSourceFile().isPresent()) {			
+			// NOTE: While we could have used  
+			// loader.load(sourcePath.toFile()
+			// if the path fs provider == FileSystems.getDefault(), 			
+			// that RDFLoader method does not use absolute path
+			// as the base URI, so to be consistent 
+			// we'll always do it with our own input stream
+			//
+			// That means we may have to guess format by extensions:			
+			Optional<RDFFormat> formatByFilename = getSourceFile().map(Path::getFileName).map(Path::toString)
+					.flatMap(Rio::getParserFormatForFileName);
+			// TODO: for the excited.. what about the extension after following symlinks? 
+			
+			RDFFormat format = formatByMimeType.orElse(formatByFilename.orElse(null));
+			try (InputStream in = Files.newInputStream(getSourceFile().get())) {
+				loader.load(in, base, format, rdfHandler);
+			}
+		} else if (getSourceIri().isPresent()) {
+			try {
+				// TODO: Handle international IRIs properly
+				// (Unicode support for for hostname, path and query)
+				URL url = new URL(getSourceIri().get().getIRIString());
+				// TODO: This probably does not support https:// -> http:// redirections
+				loader.load(url, base, formatByMimeType.orElse(null), makeRDFHandler());
+			} catch (MalformedURLException ex) {
+				throw new IOException("Can't handle source URL: " + getSourceIri().get(), ex);
+			}			
+		}
+		// must be getSourceInputStream then, this is guaranteed by super.checkSource(); 		
+		loader.load(getSourceInputStream().get(), base, formatByMimeType.orElse(null), rdfHandler);
+	}
+
+	protected RDFHandler makeRDFHandler() {
+
+		// TODO: Can we join the below DF4JDataset and RDF4JGraph cases
+		// using RDF4JGraphLike<TripleLike<BlankNodeOrIRI,IRI,RDFTerm>>
+		// or will that need tricky generics types?
+
+		if (getTargetDataset().filter(RDF4JDataset.class::isInstance).isPresent()) {
+			// One of us, we can add them as Statements directly
+			RDF4JDataset dataset = (RDF4JDataset) getTargetDataset().get();
+			if (dataset.asRepository().isPresent()) {
+				return new RDFInserter(dataset.asRepository().get().getConnection());
+			}
+			if (dataset.asModel().isPresent()) {
+				Model model = dataset.asModel().get();
+				return new AddToModel(model);
+			}
+			// Not backed by Repository or Model?
+			// Third-party RDF4JDataset subclass, so we'll fall through to the
+			// getTarget() handling further down
+		} else if (getTargetGraph().filter(RDF4JGraph.class::isInstance).isPresent()) {
+			RDF4JGraph graph = (RDF4JGraph) getTargetGraph().get();
+
+			if (graph.asRepository().isPresent()) {
+				RDFInserter inserter = new RDFInserter(graph.asRepository().get().getConnection());
+				graph.getContextFilter().ifPresent(inserter::enforceContext);
+				return inserter;
+			}
+			if (graph.asModel().isPresent() && graph.getContextFilter().isPresent()) {
+				Model model = graph.asModel().get();
+				return new AddToModel(model);
+			}
+			// else - fall through
+		}
+
+		// Fall thorough: let target() consume our converted quads.
+		return new AddToQuadConsumer(getTarget());
+	}
+
+}

http://git-wip-us.apache.org/repos/asf/incubator-commonsrdf/blob/d9051898/rdf4j/src/main/java/org/apache/commons/rdf/rdf4j/experimental/package-info.java
----------------------------------------------------------------------
diff --git a/rdf4j/src/main/java/org/apache/commons/rdf/rdf4j/experimental/package-info.java
b/rdf4j/src/main/java/org/apache/commons/rdf/rdf4j/experimental/package-info.java
new file mode 100644
index 0000000..192a148
--- /dev/null
+++ b/rdf4j/src/main/java/org/apache/commons/rdf/rdf4j/experimental/package-info.java
@@ -0,0 +1,34 @@
+/*
+ * Licensed to the Apache Software Foundation (ASF) under one
+ * or more contributor license agreements. See the NOTICE file
+ * distributed with this work for additional information
+ * regarding copyright ownership. The ASF licenses this file
+ * to you under the Apache License, Version 2.0 (the
+ * "License"); you may not use this file except in compliance
+ * with the License.  You may obtain a copy of the License at
+ *
+ *     http://www.apache.org/licenses/LICENSE-2.0
+ *
+ * Unless required by applicable law or agreed to in writing, software
+ * distributed under the License is distributed on an "AS IS" BASIS,
+ * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
+ * See the License for the specific language governing permissions and
+ * limitations under the License.
+ */
+/**
+ * Experimental Commons RDF RDF4J implementations.
+ * <p>
+ * Classes in this package should be considered <strong>at
+ * risk</strong>; they might change or be removed in the next minor update of
+ * Commons RDF.
+ * <p>
+ * When a class has stabilized, it will move to the
+ * {@link org.apache.commons.rdf.rdf4j} package.
+ * <p>
+ * <ul>
+ * <li>{@link RDF4JParser} - an RDF4J-backed
+ * implementations of 
+ * {@link org.apache.commons.rdf.api.experimental.RDFParser}.</li>
+ * </ul>
+ */
+package org.apache.commons.rdf.rdf4j.experimental;
\ No newline at end of file

http://git-wip-us.apache.org/repos/asf/incubator-commonsrdf/blob/d9051898/rdf4j/src/main/java/org/apache/commons/rdf/rdf4j/package-info.java
----------------------------------------------------------------------
diff --git a/rdf4j/src/main/java/org/apache/commons/rdf/rdf4j/package-info.java b/rdf4j/src/main/java/org/apache/commons/rdf/rdf4j/package-info.java
index 844da5a..e384f3d 100644
--- a/rdf4j/src/main/java/org/apache/commons/rdf/rdf4j/package-info.java
+++ b/rdf4j/src/main/java/org/apache/commons/rdf/rdf4j/package-info.java
@@ -41,11 +41,11 @@
  * {@link org.apache.commons.rdf.rdf4j.RDF4JDataset} provide access to the
  * underlying RDF4J implementations.
  * <p>
- * The {@link org.apache.commons.rdf.rdf4j.RDF4JParserBuilder} can be used to
+ * The {@link org.apache.commons.rdf.rdf4j.experimental.RDF4JParser} can be used to
  * parse RDF files using RDF4j. It should be most efficient if used with
- * {@link org.apache.commons.rdf.rdf4j.RDF4JParserBuilder#target(org.apache.commons.rdf.api.Dataset)}
+ * {@link org.apache.commons.rdf.rdf4j.experimental.RDF4JParser#target(org.apache.commons.rdf.api.Dataset)}
  * and an adapted {@link org.apache.commons.rdf.rdf4j.RDF4JDataset}, or
- * {@link org.apache.commons.rdf.rdf4j.RDF4JParserBuilder#target(org.apache.commons.rdf.api.Graph)}
+ * {@link org.apache.commons.rdf.rdf4j.experimental.RDF4JParser#target(org.apache.commons.rdf.api.Graph)}
  * and a an adapted {@link org.apache.commons.rdf.rdf4j.RDF4JGraph}
  * 
  *


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