Return-Path: X-Original-To: apmail-commons-issues-archive@minotaur.apache.org Delivered-To: apmail-commons-issues-archive@minotaur.apache.org Received: from mail.apache.org (hermes.apache.org [140.211.11.3]) by minotaur.apache.org (Postfix) with SMTP id CE1FCB560 for ; Thu, 12 Jan 2012 18:18:02 +0000 (UTC) Received: (qmail 93580 invoked by uid 500); 12 Jan 2012 18:18:02 -0000 Delivered-To: apmail-commons-issues-archive@commons.apache.org Received: (qmail 93278 invoked by uid 500); 12 Jan 2012 18:18:01 -0000 Mailing-List: contact issues-help@commons.apache.org; run by ezmlm Precedence: bulk List-Help: List-Unsubscribe: List-Post: List-Id: Reply-To: issues@commons.apache.org Delivered-To: mailing list issues@commons.apache.org Received: (qmail 93261 invoked by uid 99); 12 Jan 2012 18:18:01 -0000 Received: from athena.apache.org (HELO athena.apache.org) (140.211.11.136) by apache.org (qpsmtpd/0.29) with ESMTP; Thu, 12 Jan 2012 18:18:01 +0000 X-ASF-Spam-Status: No, hits=-2000.0 required=5.0 tests=ALL_TRUSTED,T_RP_MATCHES_RCVD X-Spam-Check-By: apache.org Received: from [140.211.11.116] (HELO hel.zones.apache.org) (140.211.11.116) by apache.org (qpsmtpd/0.29) with ESMTP; Thu, 12 Jan 2012 18:17:59 +0000 Received: from hel.zones.apache.org (hel.zones.apache.org [140.211.11.116]) by hel.zones.apache.org (Postfix) with ESMTP id AC045148F13 for ; Thu, 12 Jan 2012 18:17:39 +0000 (UTC) Date: Thu, 12 Jan 2012 18:17:39 +0000 (UTC) From: "Kurt Ostfeld (Updated) (JIRA)" To: issues@commons.apache.org Message-ID: <958974030.35266.1326392259706.JavaMail.tomcat@hel.zones.apache.org> In-Reply-To: <785426659.35234.1326391659832.JavaMail.tomcat@hel.zones.apache.org> Subject: [jira] [Updated] (MATH-732) Major Speed Improvement to 1D Discrete Fourier Transform (approximately 5x-9x improvement). Preserved public API 100%. Removed unnecessary use of instance variables and instance state. MIME-Version: 1.0 Content-Type: text/plain; charset=utf-8 Content-Transfer-Encoding: 7bit X-JIRA-FingerPrint: 30527f35849b9dde25b450d4833f0394 [ https://issues.apache.org/jira/browse/MATH-732?page=com.atlassian.jira.plugin.system.issuetabpanels:all-tabpanel ] Kurt Ostfeld updated MATH-732: ------------------------------ Attachment: DFTPerformanceWithPatch.png DFTPerformanceWithoutPatch.png These benchmarks were run on my laptop and averaged over ten trials. The benchmark code used the current and unchanged public API to the 3.0 FastFourierTransformer class. > Major Speed Improvement to 1D Discrete Fourier Transform (approximately 5x-9x improvement). Preserved public API 100%. Removed unnecessary use of instance variables and instance state. > ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- > > Key: MATH-732 > URL: https://issues.apache.org/jira/browse/MATH-732 > Project: Commons Math > Issue Type: Improvement > Affects Versions: 3.0 > Reporter: Kurt Ostfeld > Labels: api, perfomance > Fix For: 3.0 > > Attachments: DFTPerformanceWithPatch.png, DFTPerformanceWithoutPatch.png, FastFourierTransformer.java.diff, FastFourierTransformerTest.java.diff > > > I wrote my own Discrete Fourier Transform function in Java and ran some benchmarks and found that it ran dramatically faster than the Apache library implementation. This is a pretty straight forward implementation of the standard Cooley Tukey algorithm that I read out of a textbook. This passes all the Apache library test cases plus several I had written on my own. I created a source code library patch that preserves the public API completely while changing the internal implementation to achieve the performance improvement. > In addition to the performance issue, I suggest that Discrete Fourier Transform functionality be provided as stateless pure functions (in Java this would be implemented with static methods) just like most other math functions. As-is, the library requires the user to instantiate a Transformer instance which maintains instance state, which is an unecessary complexity for a pure math function. I held off on this change since it would change the public API and affect existing code. However, I see similar backward compatability breaking API changes are already in the FastFourierTransformer class in the 3.0 code base. -- This message is automatically generated by JIRA. If you think it was sent incorrectly, please contact your JIRA administrators: https://issues.apache.org/jira/secure/ContactAdministrators!default.jspa For more information on JIRA, see: http://www.atlassian.com/software/jira