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From l..@apache.org
Subject svn commit: r926176 [29/31] - in /websites/production/commons/content/proper/commons-math: apidocs/org/apache/commons/math3/analysis/interpolation/ apidocs/org/apache/commons/math3/analysis/interpolation/class-use/ apidocs/org/apache/commons/math3/dist...
Date Sat, 18 Oct 2014 20:10:40 GMT
Added: websites/production/commons/content/proper/commons-math/xref/org/apache/commons/math3/distribution/LaplaceDistribution.html
==============================================================================
--- websites/production/commons/content/proper/commons-math/xref/org/apache/commons/math3/distribution/LaplaceDistribution.html (added)
+++ websites/production/commons/content/proper/commons-math/xref/org/apache/commons/math3/distribution/LaplaceDistribution.html Sat Oct 18 20:10:38 2014
@@ -0,0 +1,166 @@
+<!DOCTYPE html PUBLIC "-//W3C//DTD XHTML 1.0 Transitional//EN" "http://www.w3.org/TR/xhtml1/DTD/xhtml1-transitional.dtd">
+<html xmlns="http://www.w3.org/1999/xhtml" xml:lang="en" lang="en">
+<head><meta http-equiv="content-type" content="text/html; charset=UTF-8" />
+<title>LaplaceDistribution xref</title>
+<link type="text/css" rel="stylesheet" href="../../../../../stylesheet.css" />
+</head>
+<body>
+<div id="overview"><a href="../../../../../../apidocs/org/apache/commons/math3/distribution/LaplaceDistribution.html">View Javadoc</a></div><pre>
+<a class="jxr_linenumber" name="L1" href="#L1">1</a>   <em class="jxr_comment">/*</em>
+<a class="jxr_linenumber" name="L2" href="#L2">2</a>   <em class="jxr_comment"> * Licensed to the Apache Software Foundation (ASF) under one or more</em>
+<a class="jxr_linenumber" name="L3" href="#L3">3</a>   <em class="jxr_comment"> * contributor license agreements.  See the NOTICE file distributed with</em>
+<a class="jxr_linenumber" name="L4" href="#L4">4</a>   <em class="jxr_comment"> * this work for additional information regarding copyright ownership.</em>
+<a class="jxr_linenumber" name="L5" href="#L5">5</a>   <em class="jxr_comment"> * The ASF licenses this file to You under the Apache License, Version 2.0</em>
+<a class="jxr_linenumber" name="L6" href="#L6">6</a>   <em class="jxr_comment"> * (the "License"); you may not use this file except in compliance with</em>
+<a class="jxr_linenumber" name="L7" href="#L7">7</a>   <em class="jxr_comment"> * the License.  You may obtain a copy of the License at</em>
+<a class="jxr_linenumber" name="L8" href="#L8">8</a>   <em class="jxr_comment"> *</em>
+<a class="jxr_linenumber" name="L9" href="#L9">9</a>   <em class="jxr_comment"> *      <a href="http://www.apache.org/licenses/LICENSE-2." target="alexandria_uri">http://www.apache.org/licenses/LICENSE-2.</a>0</em>
+<a class="jxr_linenumber" name="L10" href="#L10">10</a>  <em class="jxr_comment"> *</em>
+<a class="jxr_linenumber" name="L11" href="#L11">11</a>  <em class="jxr_comment"> * Unless required by applicable law or agreed to in writing, software</em>
+<a class="jxr_linenumber" name="L12" href="#L12">12</a>  <em class="jxr_comment"> * distributed under the License is distributed on an "AS IS" BASIS,</em>
+<a class="jxr_linenumber" name="L13" href="#L13">13</a>  <em class="jxr_comment"> * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.</em>
+<a class="jxr_linenumber" name="L14" href="#L14">14</a>  <em class="jxr_comment"> * See the License for the specific language governing permissions and</em>
+<a class="jxr_linenumber" name="L15" href="#L15">15</a>  <em class="jxr_comment"> * limitations under the License.</em>
+<a class="jxr_linenumber" name="L16" href="#L16">16</a>  <em class="jxr_comment"> */</em>
+<a class="jxr_linenumber" name="L17" href="#L17">17</a>  <strong class="jxr_keyword">package</strong> org.apache.commons.math3.distribution;
+<a class="jxr_linenumber" name="L18" href="#L18">18</a>  
+<a class="jxr_linenumber" name="L19" href="#L19">19</a>  <strong class="jxr_keyword">import</strong> org.apache.commons.math3.exception.NotStrictlyPositiveException;
+<a class="jxr_linenumber" name="L20" href="#L20">20</a>  <strong class="jxr_keyword">import</strong> org.apache.commons.math3.exception.OutOfRangeException;
+<a class="jxr_linenumber" name="L21" href="#L21">21</a>  <strong class="jxr_keyword">import</strong> org.apache.commons.math3.exception.util.LocalizedFormats;
+<a class="jxr_linenumber" name="L22" href="#L22">22</a>  <strong class="jxr_keyword">import</strong> org.apache.commons.math3.random.RandomGenerator;
+<a class="jxr_linenumber" name="L23" href="#L23">23</a>  <strong class="jxr_keyword">import</strong> org.apache.commons.math3.random.Well19937c;
+<a class="jxr_linenumber" name="L24" href="#L24">24</a>  <strong class="jxr_keyword">import</strong> org.apache.commons.math3.util.FastMath;
+<a class="jxr_linenumber" name="L25" href="#L25">25</a>  
+<a class="jxr_linenumber" name="L26" href="#L26">26</a>  <em class="jxr_javadoccomment">/**</em>
+<a class="jxr_linenumber" name="L27" href="#L27">27</a>  <em class="jxr_javadoccomment"> * This class implements the Laplace distribution.</em>
+<a class="jxr_linenumber" name="L28" href="#L28">28</a>  <em class="jxr_javadoccomment"> *</em>
+<a class="jxr_linenumber" name="L29" href="#L29">29</a>  <em class="jxr_javadoccomment"> * @see &lt;a href="<a href="http://en.wikipedia.org/wiki/Laplace_distribution" target="alexandria_uri">http://en.wikipedia.org/wiki/Laplace_distribution</a>"&gt;Laplace distribution (Wikipedia)&lt;/a&gt;</em>
+<a class="jxr_linenumber" name="L30" href="#L30">30</a>  <em class="jxr_javadoccomment"> *</em>
+<a class="jxr_linenumber" name="L31" href="#L31">31</a>  <em class="jxr_javadoccomment"> * @since 3.4</em>
+<a class="jxr_linenumber" name="L32" href="#L32">32</a>  <em class="jxr_javadoccomment"> */</em>
+<a class="jxr_linenumber" name="L33" href="#L33">33</a>  <strong class="jxr_keyword">public</strong> <strong class="jxr_keyword">class</strong> <a href="../../../../../org/apache/commons/math3/distribution/LaplaceDistribution.html">LaplaceDistribution</a> <strong class="jxr_keyword">extends</strong> <a href="../../../../../org/apache/commons/math3/distribution/AbstractRealDistribution.html">AbstractRealDistribution</a> {
+<a class="jxr_linenumber" name="L34" href="#L34">34</a>  
+<a class="jxr_linenumber" name="L35" href="#L35">35</a>      <em class="jxr_javadoccomment">/** Serializable version identifier. */</em>
+<a class="jxr_linenumber" name="L36" href="#L36">36</a>      <strong class="jxr_keyword">private</strong> <strong class="jxr_keyword">static</strong> <strong class="jxr_keyword">final</strong> <strong class="jxr_keyword">long</strong> serialVersionUID = 20141003;
+<a class="jxr_linenumber" name="L37" href="#L37">37</a>  
+<a class="jxr_linenumber" name="L38" href="#L38">38</a>      <em class="jxr_javadoccomment">/** The location parameter. */</em>
+<a class="jxr_linenumber" name="L39" href="#L39">39</a>      <strong class="jxr_keyword">private</strong> <strong class="jxr_keyword">final</strong> <strong class="jxr_keyword">double</strong> mu;
+<a class="jxr_linenumber" name="L40" href="#L40">40</a>      <em class="jxr_javadoccomment">/** The scale parameter. */</em>
+<a class="jxr_linenumber" name="L41" href="#L41">41</a>      <strong class="jxr_keyword">private</strong> <strong class="jxr_keyword">final</strong> <strong class="jxr_keyword">double</strong> beta;
+<a class="jxr_linenumber" name="L42" href="#L42">42</a>  
+<a class="jxr_linenumber" name="L43" href="#L43">43</a>      <em class="jxr_javadoccomment">/**</em>
+<a class="jxr_linenumber" name="L44" href="#L44">44</a>  <em class="jxr_javadoccomment">     * Build a new instance.</em>
+<a class="jxr_linenumber" name="L45" href="#L45">45</a>  <em class="jxr_javadoccomment">     *</em>
+<a class="jxr_linenumber" name="L46" href="#L46">46</a>  <em class="jxr_javadoccomment">     * @param mu location parameter</em>
+<a class="jxr_linenumber" name="L47" href="#L47">47</a>  <em class="jxr_javadoccomment">     * @param beta scale parameter (must be positive)</em>
+<a class="jxr_linenumber" name="L48" href="#L48">48</a>  <em class="jxr_javadoccomment">     * @throws NotStrictlyPositiveException if {@code beta &lt;= 0}</em>
+<a class="jxr_linenumber" name="L49" href="#L49">49</a>  <em class="jxr_javadoccomment">     */</em>
+<a class="jxr_linenumber" name="L50" href="#L50">50</a>      <strong class="jxr_keyword">public</strong> <a href="../../../../../org/apache/commons/math3/distribution/LaplaceDistribution.html">LaplaceDistribution</a>(<strong class="jxr_keyword">double</strong> mu, <strong class="jxr_keyword">double</strong> beta) {
+<a class="jxr_linenumber" name="L51" href="#L51">51</a>          <strong class="jxr_keyword">this</strong>(<strong class="jxr_keyword">new</strong> <a href="../../../../../org/apache/commons/math3/random/Well19937c.html">Well19937c</a>(), mu, beta);
+<a class="jxr_linenumber" name="L52" href="#L52">52</a>      }
+<a class="jxr_linenumber" name="L53" href="#L53">53</a>  
+<a class="jxr_linenumber" name="L54" href="#L54">54</a>      <em class="jxr_javadoccomment">/**</em>
+<a class="jxr_linenumber" name="L55" href="#L55">55</a>  <em class="jxr_javadoccomment">     * Build a new instance.</em>
+<a class="jxr_linenumber" name="L56" href="#L56">56</a>  <em class="jxr_javadoccomment">     *</em>
+<a class="jxr_linenumber" name="L57" href="#L57">57</a>  <em class="jxr_javadoccomment">     * @param rng Random number generator</em>
+<a class="jxr_linenumber" name="L58" href="#L58">58</a>  <em class="jxr_javadoccomment">     * @param mu location parameter</em>
+<a class="jxr_linenumber" name="L59" href="#L59">59</a>  <em class="jxr_javadoccomment">     * @param beta scale parameter (must be positive)</em>
+<a class="jxr_linenumber" name="L60" href="#L60">60</a>  <em class="jxr_javadoccomment">     * @throws NotStrictlyPositiveException if {@code beta &lt;= 0}</em>
+<a class="jxr_linenumber" name="L61" href="#L61">61</a>  <em class="jxr_javadoccomment">     */</em>
+<a class="jxr_linenumber" name="L62" href="#L62">62</a>      <strong class="jxr_keyword">public</strong> <a href="../../../../../org/apache/commons/math3/distribution/LaplaceDistribution.html">LaplaceDistribution</a>(<a href="../../../../../org/apache/commons/math3/random/RandomGenerator.html">RandomGenerator</a> rng, <strong class="jxr_keyword">double</strong> mu, <strong class="jxr_keyword">double</strong> beta) {
+<a class="jxr_linenumber" name="L63" href="#L63">63</a>          <strong class="jxr_keyword">super</strong>(rng);
+<a class="jxr_linenumber" name="L64" href="#L64">64</a>  
+<a class="jxr_linenumber" name="L65" href="#L65">65</a>          <strong class="jxr_keyword">if</strong> (beta &lt;= 0.0) {
+<a class="jxr_linenumber" name="L66" href="#L66">66</a>              <strong class="jxr_keyword">throw</strong> <strong class="jxr_keyword">new</strong> <a href="../../../../../org/apache/commons/math3/exception/NotStrictlyPositiveException.html">NotStrictlyPositiveException</a>(LocalizedFormats.NOT_POSITIVE_SCALE, beta);
+<a class="jxr_linenumber" name="L67" href="#L67">67</a>          }
+<a class="jxr_linenumber" name="L68" href="#L68">68</a>  
+<a class="jxr_linenumber" name="L69" href="#L69">69</a>          <strong class="jxr_keyword">this</strong>.mu = mu;
+<a class="jxr_linenumber" name="L70" href="#L70">70</a>          <strong class="jxr_keyword">this</strong>.beta = beta;
+<a class="jxr_linenumber" name="L71" href="#L71">71</a>      }
+<a class="jxr_linenumber" name="L72" href="#L72">72</a>  
+<a class="jxr_linenumber" name="L73" href="#L73">73</a>      <em class="jxr_javadoccomment">/**</em>
+<a class="jxr_linenumber" name="L74" href="#L74">74</a>  <em class="jxr_javadoccomment">     * Access the location parameter, {@code mu}.</em>
+<a class="jxr_linenumber" name="L75" href="#L75">75</a>  <em class="jxr_javadoccomment">     *</em>
+<a class="jxr_linenumber" name="L76" href="#L76">76</a>  <em class="jxr_javadoccomment">     * @return the location parameter.</em>
+<a class="jxr_linenumber" name="L77" href="#L77">77</a>  <em class="jxr_javadoccomment">     */</em>
+<a class="jxr_linenumber" name="L78" href="#L78">78</a>      <strong class="jxr_keyword">public</strong> <strong class="jxr_keyword">double</strong> getLocation() {
+<a class="jxr_linenumber" name="L79" href="#L79">79</a>          <strong class="jxr_keyword">return</strong> mu;
+<a class="jxr_linenumber" name="L80" href="#L80">80</a>      }
+<a class="jxr_linenumber" name="L81" href="#L81">81</a>  
+<a class="jxr_linenumber" name="L82" href="#L82">82</a>      <em class="jxr_javadoccomment">/**</em>
+<a class="jxr_linenumber" name="L83" href="#L83">83</a>  <em class="jxr_javadoccomment">     * Access the scale parameter, {@code beta}.</em>
+<a class="jxr_linenumber" name="L84" href="#L84">84</a>  <em class="jxr_javadoccomment">     *</em>
+<a class="jxr_linenumber" name="L85" href="#L85">85</a>  <em class="jxr_javadoccomment">     * @return the scale parameter.</em>
+<a class="jxr_linenumber" name="L86" href="#L86">86</a>  <em class="jxr_javadoccomment">     */</em>
+<a class="jxr_linenumber" name="L87" href="#L87">87</a>      <strong class="jxr_keyword">public</strong> <strong class="jxr_keyword">double</strong> getScale() {
+<a class="jxr_linenumber" name="L88" href="#L88">88</a>          <strong class="jxr_keyword">return</strong> beta;
+<a class="jxr_linenumber" name="L89" href="#L89">89</a>      }
+<a class="jxr_linenumber" name="L90" href="#L90">90</a>  
+<a class="jxr_linenumber" name="L91" href="#L91">91</a>      <em class="jxr_javadoccomment">/** {@inheritDoc} */</em>
+<a class="jxr_linenumber" name="L92" href="#L92">92</a>      <strong class="jxr_keyword">public</strong> <strong class="jxr_keyword">double</strong> density(<strong class="jxr_keyword">double</strong> x) {
+<a class="jxr_linenumber" name="L93" href="#L93">93</a>          <strong class="jxr_keyword">return</strong> FastMath.exp(-FastMath.abs(x - mu) / beta) / (2.0 * beta);
+<a class="jxr_linenumber" name="L94" href="#L94">94</a>      }
+<a class="jxr_linenumber" name="L95" href="#L95">95</a>  
+<a class="jxr_linenumber" name="L96" href="#L96">96</a>      <em class="jxr_javadoccomment">/** {@inheritDoc} */</em>
+<a class="jxr_linenumber" name="L97" href="#L97">97</a>      <strong class="jxr_keyword">public</strong> <strong class="jxr_keyword">double</strong> cumulativeProbability(<strong class="jxr_keyword">double</strong> x) {
+<a class="jxr_linenumber" name="L98" href="#L98">98</a>          <strong class="jxr_keyword">if</strong> (x &lt;= mu) {
+<a class="jxr_linenumber" name="L99" href="#L99">99</a>              <strong class="jxr_keyword">return</strong> FastMath.exp((x - mu) / beta) / 2.0;
+<a class="jxr_linenumber" name="L100" href="#L100">100</a>         } <strong class="jxr_keyword">else</strong> {
+<a class="jxr_linenumber" name="L101" href="#L101">101</a>             <strong class="jxr_keyword">return</strong> 1.0 - FastMath.exp((mu - x) / beta) / 2.0;
+<a class="jxr_linenumber" name="L102" href="#L102">102</a>         }
+<a class="jxr_linenumber" name="L103" href="#L103">103</a>     }
+<a class="jxr_linenumber" name="L104" href="#L104">104</a> 
+<a class="jxr_linenumber" name="L105" href="#L105">105</a>     @Override
+<a class="jxr_linenumber" name="L106" href="#L106">106</a>     <strong class="jxr_keyword">public</strong> <strong class="jxr_keyword">double</strong> inverseCumulativeProbability(<strong class="jxr_keyword">double</strong> p) <strong class="jxr_keyword">throws</strong> OutOfRangeException {
+<a class="jxr_linenumber" name="L107" href="#L107">107</a>         <strong class="jxr_keyword">if</strong> (p &lt; 0.0 || p &gt; 1.0) {
+<a class="jxr_linenumber" name="L108" href="#L108">108</a>             <strong class="jxr_keyword">throw</strong> <strong class="jxr_keyword">new</strong> <a href="../../../../../org/apache/commons/math3/exception/OutOfRangeException.html">OutOfRangeException</a>(p, 0.0, 1.0);
+<a class="jxr_linenumber" name="L109" href="#L109">109</a>         } <strong class="jxr_keyword">else</strong> <strong class="jxr_keyword">if</strong> (p == 0) {
+<a class="jxr_linenumber" name="L110" href="#L110">110</a>             <strong class="jxr_keyword">return</strong> 0.0;
+<a class="jxr_linenumber" name="L111" href="#L111">111</a>         } <strong class="jxr_keyword">else</strong> <strong class="jxr_keyword">if</strong> (p == 1) {
+<a class="jxr_linenumber" name="L112" href="#L112">112</a>             <strong class="jxr_keyword">return</strong> Double.POSITIVE_INFINITY;
+<a class="jxr_linenumber" name="L113" href="#L113">113</a>         }
+<a class="jxr_linenumber" name="L114" href="#L114">114</a>         <strong class="jxr_keyword">double</strong> x = (p &gt; 0.5) ? -Math.log(2.0 - 2.0 * p) : Math.log(2.0 * p);
+<a class="jxr_linenumber" name="L115" href="#L115">115</a>         <strong class="jxr_keyword">return</strong> mu + beta * x;
+<a class="jxr_linenumber" name="L116" href="#L116">116</a>     }
+<a class="jxr_linenumber" name="L117" href="#L117">117</a> 
+<a class="jxr_linenumber" name="L118" href="#L118">118</a>     <em class="jxr_javadoccomment">/** {@inheritDoc} */</em>
+<a class="jxr_linenumber" name="L119" href="#L119">119</a>     <strong class="jxr_keyword">public</strong> <strong class="jxr_keyword">double</strong> getNumericalMean() {
+<a class="jxr_linenumber" name="L120" href="#L120">120</a>         <strong class="jxr_keyword">return</strong> mu;
+<a class="jxr_linenumber" name="L121" href="#L121">121</a>     }
+<a class="jxr_linenumber" name="L122" href="#L122">122</a> 
+<a class="jxr_linenumber" name="L123" href="#L123">123</a>     <em class="jxr_javadoccomment">/** {@inheritDoc} */</em>
+<a class="jxr_linenumber" name="L124" href="#L124">124</a>     <strong class="jxr_keyword">public</strong> <strong class="jxr_keyword">double</strong> getNumericalVariance() {
+<a class="jxr_linenumber" name="L125" href="#L125">125</a>         <strong class="jxr_keyword">return</strong> 2.0 * beta * beta;
+<a class="jxr_linenumber" name="L126" href="#L126">126</a>     }
+<a class="jxr_linenumber" name="L127" href="#L127">127</a> 
+<a class="jxr_linenumber" name="L128" href="#L128">128</a>     <em class="jxr_javadoccomment">/** {@inheritDoc} */</em>
+<a class="jxr_linenumber" name="L129" href="#L129">129</a>     <strong class="jxr_keyword">public</strong> <strong class="jxr_keyword">double</strong> getSupportLowerBound() {
+<a class="jxr_linenumber" name="L130" href="#L130">130</a>         <strong class="jxr_keyword">return</strong> Double.NEGATIVE_INFINITY;
+<a class="jxr_linenumber" name="L131" href="#L131">131</a>     }
+<a class="jxr_linenumber" name="L132" href="#L132">132</a> 
+<a class="jxr_linenumber" name="L133" href="#L133">133</a>     <em class="jxr_javadoccomment">/** {@inheritDoc} */</em>
+<a class="jxr_linenumber" name="L134" href="#L134">134</a>     <strong class="jxr_keyword">public</strong> <strong class="jxr_keyword">double</strong> getSupportUpperBound() {
+<a class="jxr_linenumber" name="L135" href="#L135">135</a>         <strong class="jxr_keyword">return</strong> Double.POSITIVE_INFINITY;
+<a class="jxr_linenumber" name="L136" href="#L136">136</a>     }
+<a class="jxr_linenumber" name="L137" href="#L137">137</a> 
+<a class="jxr_linenumber" name="L138" href="#L138">138</a>     <em class="jxr_javadoccomment">/** {@inheritDoc} */</em>
+<a class="jxr_linenumber" name="L139" href="#L139">139</a>     <strong class="jxr_keyword">public</strong> <strong class="jxr_keyword">boolean</strong> isSupportLowerBoundInclusive() {
+<a class="jxr_linenumber" name="L140" href="#L140">140</a>         <strong class="jxr_keyword">return</strong> false;
+<a class="jxr_linenumber" name="L141" href="#L141">141</a>     }
+<a class="jxr_linenumber" name="L142" href="#L142">142</a> 
+<a class="jxr_linenumber" name="L143" href="#L143">143</a>     <em class="jxr_javadoccomment">/** {@inheritDoc} */</em>
+<a class="jxr_linenumber" name="L144" href="#L144">144</a>     <strong class="jxr_keyword">public</strong> <strong class="jxr_keyword">boolean</strong> isSupportUpperBoundInclusive() {
+<a class="jxr_linenumber" name="L145" href="#L145">145</a>         <strong class="jxr_keyword">return</strong> false;
+<a class="jxr_linenumber" name="L146" href="#L146">146</a>     }
+<a class="jxr_linenumber" name="L147" href="#L147">147</a> 
+<a class="jxr_linenumber" name="L148" href="#L148">148</a>     <em class="jxr_javadoccomment">/** {@inheritDoc} */</em>
+<a class="jxr_linenumber" name="L149" href="#L149">149</a>     <strong class="jxr_keyword">public</strong> <strong class="jxr_keyword">boolean</strong> isSupportConnected() {
+<a class="jxr_linenumber" name="L150" href="#L150">150</a>         <strong class="jxr_keyword">return</strong> <strong class="jxr_keyword">true</strong>;
+<a class="jxr_linenumber" name="L151" href="#L151">151</a>     }
+<a class="jxr_linenumber" name="L152" href="#L152">152</a> 
+<a class="jxr_linenumber" name="L153" href="#L153">153</a> }
+</pre>
+<hr/>
+<div id="footer">Copyright &#169; 2003&#x2013;2014 <a href="http://www.apache.org/">The Apache Software Foundation</a>. All rights reserved.</div>
+</body>
+</html>

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+<!DOCTYPE html PUBLIC "-//W3C//DTD XHTML 1.0 Transitional//EN" "http://www.w3.org/TR/xhtml1/DTD/xhtml1-transitional.dtd">
+<html xmlns="http://www.w3.org/1999/xhtml" xml:lang="en" lang="en">
+<head><meta http-equiv="content-type" content="text/html; charset=UTF-8" />
+<title>LogisticDistribution xref</title>
+<link type="text/css" rel="stylesheet" href="../../../../../stylesheet.css" />
+</head>
+<body>
+<div id="overview"><a href="../../../../../../apidocs/org/apache/commons/math3/distribution/LogisticDistribution.html">View Javadoc</a></div><pre>
+<a class="jxr_linenumber" name="L1" href="#L1">1</a>   <em class="jxr_comment">/*</em>
+<a class="jxr_linenumber" name="L2" href="#L2">2</a>   <em class="jxr_comment"> * Licensed to the Apache Software Foundation (ASF) under one or more</em>
+<a class="jxr_linenumber" name="L3" href="#L3">3</a>   <em class="jxr_comment"> * contributor license agreements.  See the NOTICE file distributed with</em>
+<a class="jxr_linenumber" name="L4" href="#L4">4</a>   <em class="jxr_comment"> * this work for additional information regarding copyright ownership.</em>
+<a class="jxr_linenumber" name="L5" href="#L5">5</a>   <em class="jxr_comment"> * The ASF licenses this file to You under the Apache License, Version 2.0</em>
+<a class="jxr_linenumber" name="L6" href="#L6">6</a>   <em class="jxr_comment"> * (the "License"); you may not use this file except in compliance with</em>
+<a class="jxr_linenumber" name="L7" href="#L7">7</a>   <em class="jxr_comment"> * the License.  You may obtain a copy of the License at</em>
+<a class="jxr_linenumber" name="L8" href="#L8">8</a>   <em class="jxr_comment"> *</em>
+<a class="jxr_linenumber" name="L9" href="#L9">9</a>   <em class="jxr_comment"> *      <a href="http://www.apache.org/licenses/LICENSE-2." target="alexandria_uri">http://www.apache.org/licenses/LICENSE-2.</a>0</em>
+<a class="jxr_linenumber" name="L10" href="#L10">10</a>  <em class="jxr_comment"> *</em>
+<a class="jxr_linenumber" name="L11" href="#L11">11</a>  <em class="jxr_comment"> * Unless required by applicable law or agreed to in writing, software</em>
+<a class="jxr_linenumber" name="L12" href="#L12">12</a>  <em class="jxr_comment"> * distributed under the License is distributed on an "AS IS" BASIS,</em>
+<a class="jxr_linenumber" name="L13" href="#L13">13</a>  <em class="jxr_comment"> * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.</em>
+<a class="jxr_linenumber" name="L14" href="#L14">14</a>  <em class="jxr_comment"> * See the License for the specific language governing permissions and</em>
+<a class="jxr_linenumber" name="L15" href="#L15">15</a>  <em class="jxr_comment"> * limitations under the License.</em>
+<a class="jxr_linenumber" name="L16" href="#L16">16</a>  <em class="jxr_comment"> */</em>
+<a class="jxr_linenumber" name="L17" href="#L17">17</a>  <strong class="jxr_keyword">package</strong> org.apache.commons.math3.distribution;
+<a class="jxr_linenumber" name="L18" href="#L18">18</a>  
+<a class="jxr_linenumber" name="L19" href="#L19">19</a>  <strong class="jxr_keyword">import</strong> org.apache.commons.math3.exception.NotStrictlyPositiveException;
+<a class="jxr_linenumber" name="L20" href="#L20">20</a>  <strong class="jxr_keyword">import</strong> org.apache.commons.math3.exception.OutOfRangeException;
+<a class="jxr_linenumber" name="L21" href="#L21">21</a>  <strong class="jxr_keyword">import</strong> org.apache.commons.math3.exception.util.LocalizedFormats;
+<a class="jxr_linenumber" name="L22" href="#L22">22</a>  <strong class="jxr_keyword">import</strong> org.apache.commons.math3.random.RandomGenerator;
+<a class="jxr_linenumber" name="L23" href="#L23">23</a>  <strong class="jxr_keyword">import</strong> org.apache.commons.math3.random.Well19937c;
+<a class="jxr_linenumber" name="L24" href="#L24">24</a>  <strong class="jxr_keyword">import</strong> org.apache.commons.math3.util.FastMath;
+<a class="jxr_linenumber" name="L25" href="#L25">25</a>  <strong class="jxr_keyword">import</strong> org.apache.commons.math3.util.MathUtils;
+<a class="jxr_linenumber" name="L26" href="#L26">26</a>  
+<a class="jxr_linenumber" name="L27" href="#L27">27</a>  <em class="jxr_javadoccomment">/**</em>
+<a class="jxr_linenumber" name="L28" href="#L28">28</a>  <em class="jxr_javadoccomment"> * This class implements the Logistic distribution.</em>
+<a class="jxr_linenumber" name="L29" href="#L29">29</a>  <em class="jxr_javadoccomment"> *</em>
+<a class="jxr_linenumber" name="L30" href="#L30">30</a>  <em class="jxr_javadoccomment"> * @see &lt;a href="<a href="http://en.wikipedia.org/wiki/Logistic_distribution" target="alexandria_uri">http://en.wikipedia.org/wiki/Logistic_distribution</a>"&gt;Logistic Distribution (Wikipedia)&lt;/a&gt;</em>
+<a class="jxr_linenumber" name="L31" href="#L31">31</a>  <em class="jxr_javadoccomment"> * @see &lt;a href="<a href="http://mathworld.wolfram.com/LogisticDistribution.html" target="alexandria_uri">http://mathworld.wolfram.com/LogisticDistribution.html</a>"&gt;Logistic Distribution (Mathworld)&lt;/a&gt;</em>
+<a class="jxr_linenumber" name="L32" href="#L32">32</a>  <em class="jxr_javadoccomment"> *</em>
+<a class="jxr_linenumber" name="L33" href="#L33">33</a>  <em class="jxr_javadoccomment"> * @since 3.4</em>
+<a class="jxr_linenumber" name="L34" href="#L34">34</a>  <em class="jxr_javadoccomment"> */</em>
+<a class="jxr_linenumber" name="L35" href="#L35">35</a>  <strong class="jxr_keyword">public</strong> <strong class="jxr_keyword">class</strong> <a href="../../../../../org/apache/commons/math3/distribution/LogisticDistribution.html">LogisticDistribution</a> <strong class="jxr_keyword">extends</strong> <a href="../../../../../org/apache/commons/math3/distribution/AbstractRealDistribution.html">AbstractRealDistribution</a> {
+<a class="jxr_linenumber" name="L36" href="#L36">36</a>  
+<a class="jxr_linenumber" name="L37" href="#L37">37</a>      <em class="jxr_javadoccomment">/** Serializable version identifier. */</em>
+<a class="jxr_linenumber" name="L38" href="#L38">38</a>      <strong class="jxr_keyword">private</strong> <strong class="jxr_keyword">static</strong> <strong class="jxr_keyword">final</strong> <strong class="jxr_keyword">long</strong> serialVersionUID = 20141003;
+<a class="jxr_linenumber" name="L39" href="#L39">39</a>  
+<a class="jxr_linenumber" name="L40" href="#L40">40</a>      <em class="jxr_javadoccomment">/** The location parameter. */</em>
+<a class="jxr_linenumber" name="L41" href="#L41">41</a>      <strong class="jxr_keyword">private</strong> <strong class="jxr_keyword">final</strong> <strong class="jxr_keyword">double</strong> mu;
+<a class="jxr_linenumber" name="L42" href="#L42">42</a>      <em class="jxr_javadoccomment">/** The scale parameter. */</em>
+<a class="jxr_linenumber" name="L43" href="#L43">43</a>      <strong class="jxr_keyword">private</strong> <strong class="jxr_keyword">final</strong> <strong class="jxr_keyword">double</strong> s;
+<a class="jxr_linenumber" name="L44" href="#L44">44</a>  
+<a class="jxr_linenumber" name="L45" href="#L45">45</a>      <em class="jxr_javadoccomment">/**</em>
+<a class="jxr_linenumber" name="L46" href="#L46">46</a>  <em class="jxr_javadoccomment">     * Build a new instance.</em>
+<a class="jxr_linenumber" name="L47" href="#L47">47</a>  <em class="jxr_javadoccomment">     *</em>
+<a class="jxr_linenumber" name="L48" href="#L48">48</a>  <em class="jxr_javadoccomment">     * @param mu location parameter</em>
+<a class="jxr_linenumber" name="L49" href="#L49">49</a>  <em class="jxr_javadoccomment">     * @param s scale parameter (must be positive)</em>
+<a class="jxr_linenumber" name="L50" href="#L50">50</a>  <em class="jxr_javadoccomment">     * @throws NotStrictlyPositiveException if {@code beta &lt;= 0}</em>
+<a class="jxr_linenumber" name="L51" href="#L51">51</a>  <em class="jxr_javadoccomment">     */</em>
+<a class="jxr_linenumber" name="L52" href="#L52">52</a>      <strong class="jxr_keyword">public</strong> <a href="../../../../../org/apache/commons/math3/distribution/LogisticDistribution.html">LogisticDistribution</a>(<strong class="jxr_keyword">double</strong> mu, <strong class="jxr_keyword">double</strong> s) {
+<a class="jxr_linenumber" name="L53" href="#L53">53</a>          <strong class="jxr_keyword">this</strong>(<strong class="jxr_keyword">new</strong> <a href="../../../../../org/apache/commons/math3/random/Well19937c.html">Well19937c</a>(), mu, s);
+<a class="jxr_linenumber" name="L54" href="#L54">54</a>      }
+<a class="jxr_linenumber" name="L55" href="#L55">55</a>  
+<a class="jxr_linenumber" name="L56" href="#L56">56</a>      <em class="jxr_javadoccomment">/**</em>
+<a class="jxr_linenumber" name="L57" href="#L57">57</a>  <em class="jxr_javadoccomment">     * Build a new instance.</em>
+<a class="jxr_linenumber" name="L58" href="#L58">58</a>  <em class="jxr_javadoccomment">     *</em>
+<a class="jxr_linenumber" name="L59" href="#L59">59</a>  <em class="jxr_javadoccomment">     * @param rng Random number generator</em>
+<a class="jxr_linenumber" name="L60" href="#L60">60</a>  <em class="jxr_javadoccomment">     * @param mu location parameter</em>
+<a class="jxr_linenumber" name="L61" href="#L61">61</a>  <em class="jxr_javadoccomment">     * @param s scale parameter (must be positive)</em>
+<a class="jxr_linenumber" name="L62" href="#L62">62</a>  <em class="jxr_javadoccomment">     * @throws NotStrictlyPositiveException if {@code beta &lt;= 0}</em>
+<a class="jxr_linenumber" name="L63" href="#L63">63</a>  <em class="jxr_javadoccomment">     */</em>
+<a class="jxr_linenumber" name="L64" href="#L64">64</a>      <strong class="jxr_keyword">public</strong> <a href="../../../../../org/apache/commons/math3/distribution/LogisticDistribution.html">LogisticDistribution</a>(<a href="../../../../../org/apache/commons/math3/random/RandomGenerator.html">RandomGenerator</a> rng, <strong class="jxr_keyword">double</strong> mu, <strong class="jxr_keyword">double</strong> s) {
+<a class="jxr_linenumber" name="L65" href="#L65">65</a>          <strong class="jxr_keyword">super</strong>(rng);
+<a class="jxr_linenumber" name="L66" href="#L66">66</a>  
+<a class="jxr_linenumber" name="L67" href="#L67">67</a>          <strong class="jxr_keyword">if</strong> (s &lt;= 0.0) {
+<a class="jxr_linenumber" name="L68" href="#L68">68</a>              <strong class="jxr_keyword">throw</strong> <strong class="jxr_keyword">new</strong> <a href="../../../../../org/apache/commons/math3/exception/NotStrictlyPositiveException.html">NotStrictlyPositiveException</a>(LocalizedFormats.NOT_POSITIVE_SCALE, s);
+<a class="jxr_linenumber" name="L69" href="#L69">69</a>          }
+<a class="jxr_linenumber" name="L70" href="#L70">70</a>  
+<a class="jxr_linenumber" name="L71" href="#L71">71</a>          <strong class="jxr_keyword">this</strong>.mu = mu;
+<a class="jxr_linenumber" name="L72" href="#L72">72</a>          <strong class="jxr_keyword">this</strong>.s = s;
+<a class="jxr_linenumber" name="L73" href="#L73">73</a>      }
+<a class="jxr_linenumber" name="L74" href="#L74">74</a>  
+<a class="jxr_linenumber" name="L75" href="#L75">75</a>      <em class="jxr_javadoccomment">/**</em>
+<a class="jxr_linenumber" name="L76" href="#L76">76</a>  <em class="jxr_javadoccomment">     * Access the location parameter, {@code mu}.</em>
+<a class="jxr_linenumber" name="L77" href="#L77">77</a>  <em class="jxr_javadoccomment">     *</em>
+<a class="jxr_linenumber" name="L78" href="#L78">78</a>  <em class="jxr_javadoccomment">     * @return the location parameter.</em>
+<a class="jxr_linenumber" name="L79" href="#L79">79</a>  <em class="jxr_javadoccomment">     */</em>
+<a class="jxr_linenumber" name="L80" href="#L80">80</a>      <strong class="jxr_keyword">public</strong> <strong class="jxr_keyword">double</strong> getLocation() {
+<a class="jxr_linenumber" name="L81" href="#L81">81</a>          <strong class="jxr_keyword">return</strong> mu;
+<a class="jxr_linenumber" name="L82" href="#L82">82</a>      }
+<a class="jxr_linenumber" name="L83" href="#L83">83</a>  
+<a class="jxr_linenumber" name="L84" href="#L84">84</a>      <em class="jxr_javadoccomment">/**</em>
+<a class="jxr_linenumber" name="L85" href="#L85">85</a>  <em class="jxr_javadoccomment">     * Access the scale parameter, {@code s}.</em>
+<a class="jxr_linenumber" name="L86" href="#L86">86</a>  <em class="jxr_javadoccomment">     *</em>
+<a class="jxr_linenumber" name="L87" href="#L87">87</a>  <em class="jxr_javadoccomment">     * @return the scale parameter.</em>
+<a class="jxr_linenumber" name="L88" href="#L88">88</a>  <em class="jxr_javadoccomment">     */</em>
+<a class="jxr_linenumber" name="L89" href="#L89">89</a>      <strong class="jxr_keyword">public</strong> <strong class="jxr_keyword">double</strong> getScale() {
+<a class="jxr_linenumber" name="L90" href="#L90">90</a>          <strong class="jxr_keyword">return</strong> s;
+<a class="jxr_linenumber" name="L91" href="#L91">91</a>      }
+<a class="jxr_linenumber" name="L92" href="#L92">92</a>  
+<a class="jxr_linenumber" name="L93" href="#L93">93</a>      <em class="jxr_javadoccomment">/** {@inheritDoc} */</em>
+<a class="jxr_linenumber" name="L94" href="#L94">94</a>      <strong class="jxr_keyword">public</strong> <strong class="jxr_keyword">double</strong> density(<strong class="jxr_keyword">double</strong> x) {
+<a class="jxr_linenumber" name="L95" href="#L95">95</a>          <strong class="jxr_keyword">double</strong> z = (x - mu) / s;
+<a class="jxr_linenumber" name="L96" href="#L96">96</a>          <strong class="jxr_keyword">double</strong> v = FastMath.exp(-z);
+<a class="jxr_linenumber" name="L97" href="#L97">97</a>          <strong class="jxr_keyword">return</strong> 1 / s * v / ((1.0 + v) * (1.0 + v));
+<a class="jxr_linenumber" name="L98" href="#L98">98</a>      }
+<a class="jxr_linenumber" name="L99" href="#L99">99</a>  
+<a class="jxr_linenumber" name="L100" href="#L100">100</a>     <em class="jxr_javadoccomment">/** {@inheritDoc} */</em>
+<a class="jxr_linenumber" name="L101" href="#L101">101</a>     <strong class="jxr_keyword">public</strong> <strong class="jxr_keyword">double</strong> cumulativeProbability(<strong class="jxr_keyword">double</strong> x) {
+<a class="jxr_linenumber" name="L102" href="#L102">102</a>         <strong class="jxr_keyword">double</strong> z = 1 / s * (x - mu);
+<a class="jxr_linenumber" name="L103" href="#L103">103</a>         <strong class="jxr_keyword">return</strong> 1.0 / (1.0 + FastMath.exp(-z));
+<a class="jxr_linenumber" name="L104" href="#L104">104</a>     }
+<a class="jxr_linenumber" name="L105" href="#L105">105</a> 
+<a class="jxr_linenumber" name="L106" href="#L106">106</a>     @Override
+<a class="jxr_linenumber" name="L107" href="#L107">107</a>     <strong class="jxr_keyword">public</strong> <strong class="jxr_keyword">double</strong> inverseCumulativeProbability(<strong class="jxr_keyword">double</strong> p) <strong class="jxr_keyword">throws</strong> OutOfRangeException {
+<a class="jxr_linenumber" name="L108" href="#L108">108</a>         <strong class="jxr_keyword">if</strong> (p &lt; 0.0 || p &gt; 1.0) {
+<a class="jxr_linenumber" name="L109" href="#L109">109</a>             <strong class="jxr_keyword">throw</strong> <strong class="jxr_keyword">new</strong> <a href="../../../../../org/apache/commons/math3/exception/OutOfRangeException.html">OutOfRangeException</a>(p, 0.0, 1.0);
+<a class="jxr_linenumber" name="L110" href="#L110">110</a>         } <strong class="jxr_keyword">else</strong> <strong class="jxr_keyword">if</strong> (p == 0) {
+<a class="jxr_linenumber" name="L111" href="#L111">111</a>             <strong class="jxr_keyword">return</strong> 0.0;
+<a class="jxr_linenumber" name="L112" href="#L112">112</a>         } <strong class="jxr_keyword">else</strong> <strong class="jxr_keyword">if</strong> (p == 1) {
+<a class="jxr_linenumber" name="L113" href="#L113">113</a>             <strong class="jxr_keyword">return</strong> Double.POSITIVE_INFINITY;
+<a class="jxr_linenumber" name="L114" href="#L114">114</a>         }
+<a class="jxr_linenumber" name="L115" href="#L115">115</a>         <strong class="jxr_keyword">return</strong> s * Math.log(p / (1.0 - p)) + mu;
+<a class="jxr_linenumber" name="L116" href="#L116">116</a>     }
+<a class="jxr_linenumber" name="L117" href="#L117">117</a> 
+<a class="jxr_linenumber" name="L118" href="#L118">118</a>     <em class="jxr_javadoccomment">/** {@inheritDoc} */</em>
+<a class="jxr_linenumber" name="L119" href="#L119">119</a>     <strong class="jxr_keyword">public</strong> <strong class="jxr_keyword">double</strong> getNumericalMean() {
+<a class="jxr_linenumber" name="L120" href="#L120">120</a>         <strong class="jxr_keyword">return</strong> mu;
+<a class="jxr_linenumber" name="L121" href="#L121">121</a>     }
+<a class="jxr_linenumber" name="L122" href="#L122">122</a> 
+<a class="jxr_linenumber" name="L123" href="#L123">123</a>     <em class="jxr_javadoccomment">/** {@inheritDoc} */</em>
+<a class="jxr_linenumber" name="L124" href="#L124">124</a>     <strong class="jxr_keyword">public</strong> <strong class="jxr_keyword">double</strong> getNumericalVariance() {
+<a class="jxr_linenumber" name="L125" href="#L125">125</a>         <strong class="jxr_keyword">return</strong> (MathUtils.PI_SQUARED / 3.0) * (1.0 / (s * s));
+<a class="jxr_linenumber" name="L126" href="#L126">126</a>     }
+<a class="jxr_linenumber" name="L127" href="#L127">127</a> 
+<a class="jxr_linenumber" name="L128" href="#L128">128</a>     <em class="jxr_javadoccomment">/** {@inheritDoc} */</em>
+<a class="jxr_linenumber" name="L129" href="#L129">129</a>     <strong class="jxr_keyword">public</strong> <strong class="jxr_keyword">double</strong> getSupportLowerBound() {
+<a class="jxr_linenumber" name="L130" href="#L130">130</a>         <strong class="jxr_keyword">return</strong> Double.NEGATIVE_INFINITY;
+<a class="jxr_linenumber" name="L131" href="#L131">131</a>     }
+<a class="jxr_linenumber" name="L132" href="#L132">132</a> 
+<a class="jxr_linenumber" name="L133" href="#L133">133</a>     <em class="jxr_javadoccomment">/** {@inheritDoc} */</em>
+<a class="jxr_linenumber" name="L134" href="#L134">134</a>     <strong class="jxr_keyword">public</strong> <strong class="jxr_keyword">double</strong> getSupportUpperBound() {
+<a class="jxr_linenumber" name="L135" href="#L135">135</a>         <strong class="jxr_keyword">return</strong> Double.POSITIVE_INFINITY;
+<a class="jxr_linenumber" name="L136" href="#L136">136</a>     }
+<a class="jxr_linenumber" name="L137" href="#L137">137</a> 
+<a class="jxr_linenumber" name="L138" href="#L138">138</a>     <em class="jxr_javadoccomment">/** {@inheritDoc} */</em>
+<a class="jxr_linenumber" name="L139" href="#L139">139</a>     <strong class="jxr_keyword">public</strong> <strong class="jxr_keyword">boolean</strong> isSupportLowerBoundInclusive() {
+<a class="jxr_linenumber" name="L140" href="#L140">140</a>         <strong class="jxr_keyword">return</strong> false;
+<a class="jxr_linenumber" name="L141" href="#L141">141</a>     }
+<a class="jxr_linenumber" name="L142" href="#L142">142</a> 
+<a class="jxr_linenumber" name="L143" href="#L143">143</a>     <em class="jxr_javadoccomment">/** {@inheritDoc} */</em>
+<a class="jxr_linenumber" name="L144" href="#L144">144</a>     <strong class="jxr_keyword">public</strong> <strong class="jxr_keyword">boolean</strong> isSupportUpperBoundInclusive() {
+<a class="jxr_linenumber" name="L145" href="#L145">145</a>         <strong class="jxr_keyword">return</strong> false;
+<a class="jxr_linenumber" name="L146" href="#L146">146</a>     }
+<a class="jxr_linenumber" name="L147" href="#L147">147</a> 
+<a class="jxr_linenumber" name="L148" href="#L148">148</a>     <em class="jxr_javadoccomment">/** {@inheritDoc} */</em>
+<a class="jxr_linenumber" name="L149" href="#L149">149</a>     <strong class="jxr_keyword">public</strong> <strong class="jxr_keyword">boolean</strong> isSupportConnected() {
+<a class="jxr_linenumber" name="L150" href="#L150">150</a>         <strong class="jxr_keyword">return</strong> <strong class="jxr_keyword">true</strong>;
+<a class="jxr_linenumber" name="L151" href="#L151">151</a>     }
+<a class="jxr_linenumber" name="L152" href="#L152">152</a> 
+<a class="jxr_linenumber" name="L153" href="#L153">153</a> }
+</pre>
+<hr/>
+<div id="footer">Copyright &#169; 2003&#x2013;2014 <a href="http://www.apache.org/">The Apache Software Foundation</a>. All rights reserved.</div>
+</body>
+</html>

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--- websites/production/commons/content/proper/commons-math/xref/org/apache/commons/math3/distribution/NakagamiDistribution.html (added)
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@@ -0,0 +1,187 @@
+<!DOCTYPE html PUBLIC "-//W3C//DTD XHTML 1.0 Transitional//EN" "http://www.w3.org/TR/xhtml1/DTD/xhtml1-transitional.dtd">
+<html xmlns="http://www.w3.org/1999/xhtml" xml:lang="en" lang="en">
+<head><meta http-equiv="content-type" content="text/html; charset=UTF-8" />
+<title>NakagamiDistribution xref</title>
+<link type="text/css" rel="stylesheet" href="../../../../../stylesheet.css" />
+</head>
+<body>
+<div id="overview"><a href="../../../../../../apidocs/org/apache/commons/math3/distribution/NakagamiDistribution.html">View Javadoc</a></div><pre>
+<a class="jxr_linenumber" name="L1" href="#L1">1</a>   <em class="jxr_comment">/*</em>
+<a class="jxr_linenumber" name="L2" href="#L2">2</a>   <em class="jxr_comment"> * Licensed to the Apache Software Foundation (ASF) under one or more</em>
+<a class="jxr_linenumber" name="L3" href="#L3">3</a>   <em class="jxr_comment"> * contributor license agreements.  See the NOTICE file distributed with</em>
+<a class="jxr_linenumber" name="L4" href="#L4">4</a>   <em class="jxr_comment"> * this work for additional information regarding copyright ownership.</em>
+<a class="jxr_linenumber" name="L5" href="#L5">5</a>   <em class="jxr_comment"> * The ASF licenses this file to You under the Apache License, Version 2.0</em>
+<a class="jxr_linenumber" name="L6" href="#L6">6</a>   <em class="jxr_comment"> * (the "License"); you may not use this file except in compliance with</em>
+<a class="jxr_linenumber" name="L7" href="#L7">7</a>   <em class="jxr_comment"> * the License.  You may obtain a copy of the License at</em>
+<a class="jxr_linenumber" name="L8" href="#L8">8</a>   <em class="jxr_comment"> *</em>
+<a class="jxr_linenumber" name="L9" href="#L9">9</a>   <em class="jxr_comment"> *      <a href="http://www.apache.org/licenses/LICENSE-2." target="alexandria_uri">http://www.apache.org/licenses/LICENSE-2.</a>0</em>
+<a class="jxr_linenumber" name="L10" href="#L10">10</a>  <em class="jxr_comment"> *</em>
+<a class="jxr_linenumber" name="L11" href="#L11">11</a>  <em class="jxr_comment"> * Unless required by applicable law or agreed to in writing, software</em>
+<a class="jxr_linenumber" name="L12" href="#L12">12</a>  <em class="jxr_comment"> * distributed under the License is distributed on an "AS IS" BASIS,</em>
+<a class="jxr_linenumber" name="L13" href="#L13">13</a>  <em class="jxr_comment"> * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.</em>
+<a class="jxr_linenumber" name="L14" href="#L14">14</a>  <em class="jxr_comment"> * See the License for the specific language governing permissions and</em>
+<a class="jxr_linenumber" name="L15" href="#L15">15</a>  <em class="jxr_comment"> * limitations under the License.</em>
+<a class="jxr_linenumber" name="L16" href="#L16">16</a>  <em class="jxr_comment"> */</em>
+<a class="jxr_linenumber" name="L17" href="#L17">17</a>  <strong class="jxr_keyword">package</strong> org.apache.commons.math3.distribution;
+<a class="jxr_linenumber" name="L18" href="#L18">18</a>  
+<a class="jxr_linenumber" name="L19" href="#L19">19</a>  <strong class="jxr_keyword">import</strong> org.apache.commons.math3.exception.NotStrictlyPositiveException;
+<a class="jxr_linenumber" name="L20" href="#L20">20</a>  <strong class="jxr_keyword">import</strong> org.apache.commons.math3.exception.NumberIsTooSmallException;
+<a class="jxr_linenumber" name="L21" href="#L21">21</a>  <strong class="jxr_keyword">import</strong> org.apache.commons.math3.exception.util.LocalizedFormats;
+<a class="jxr_linenumber" name="L22" href="#L22">22</a>  <strong class="jxr_keyword">import</strong> org.apache.commons.math3.random.RandomGenerator;
+<a class="jxr_linenumber" name="L23" href="#L23">23</a>  <strong class="jxr_keyword">import</strong> org.apache.commons.math3.random.Well19937c;
+<a class="jxr_linenumber" name="L24" href="#L24">24</a>  <strong class="jxr_keyword">import</strong> org.apache.commons.math3.special.Gamma;
+<a class="jxr_linenumber" name="L25" href="#L25">25</a>  <strong class="jxr_keyword">import</strong> org.apache.commons.math3.util.FastMath;
+<a class="jxr_linenumber" name="L26" href="#L26">26</a>  
+<a class="jxr_linenumber" name="L27" href="#L27">27</a>  <em class="jxr_javadoccomment">/**</em>
+<a class="jxr_linenumber" name="L28" href="#L28">28</a>  <em class="jxr_javadoccomment"> * This class implements the Nakagami distribution.</em>
+<a class="jxr_linenumber" name="L29" href="#L29">29</a>  <em class="jxr_javadoccomment"> *</em>
+<a class="jxr_linenumber" name="L30" href="#L30">30</a>  <em class="jxr_javadoccomment"> * @see &lt;a href="<a href="http://en.wikipedia.org/wiki/Nakagami_distribution" target="alexandria_uri">http://en.wikipedia.org/wiki/Nakagami_distribution</a>"&gt;Nakagami Distribution (Wikipedia)&lt;/a&gt;</em>
+<a class="jxr_linenumber" name="L31" href="#L31">31</a>  <em class="jxr_javadoccomment"> *</em>
+<a class="jxr_linenumber" name="L32" href="#L32">32</a>  <em class="jxr_javadoccomment"> * @since 3.4</em>
+<a class="jxr_linenumber" name="L33" href="#L33">33</a>  <em class="jxr_javadoccomment"> */</em>
+<a class="jxr_linenumber" name="L34" href="#L34">34</a>  <strong class="jxr_keyword">public</strong> <strong class="jxr_keyword">class</strong> <a href="../../../../../org/apache/commons/math3/distribution/NakagamiDistribution.html">NakagamiDistribution</a> <strong class="jxr_keyword">extends</strong> <a href="../../../../../org/apache/commons/math3/distribution/AbstractRealDistribution.html">AbstractRealDistribution</a> {
+<a class="jxr_linenumber" name="L35" href="#L35">35</a>  
+<a class="jxr_linenumber" name="L36" href="#L36">36</a>      <em class="jxr_javadoccomment">/** Default inverse cumulative probability accuracy. */</em>
+<a class="jxr_linenumber" name="L37" href="#L37">37</a>      <strong class="jxr_keyword">public</strong> <strong class="jxr_keyword">static</strong> <strong class="jxr_keyword">final</strong> <strong class="jxr_keyword">double</strong> DEFAULT_INVERSE_ABSOLUTE_ACCURACY = 1e-9;
+<a class="jxr_linenumber" name="L38" href="#L38">38</a>  
+<a class="jxr_linenumber" name="L39" href="#L39">39</a>      <em class="jxr_javadoccomment">/** Serializable version identifier. */</em>
+<a class="jxr_linenumber" name="L40" href="#L40">40</a>      <strong class="jxr_keyword">private</strong> <strong class="jxr_keyword">static</strong> <strong class="jxr_keyword">final</strong> <strong class="jxr_keyword">long</strong> serialVersionUID = 20141003;
+<a class="jxr_linenumber" name="L41" href="#L41">41</a>  
+<a class="jxr_linenumber" name="L42" href="#L42">42</a>      <em class="jxr_javadoccomment">/** The shape parameter. */</em>
+<a class="jxr_linenumber" name="L43" href="#L43">43</a>      <strong class="jxr_keyword">private</strong> <strong class="jxr_keyword">final</strong> <strong class="jxr_keyword">double</strong> mu;
+<a class="jxr_linenumber" name="L44" href="#L44">44</a>      <em class="jxr_javadoccomment">/** The scale parameter. */</em>
+<a class="jxr_linenumber" name="L45" href="#L45">45</a>      <strong class="jxr_keyword">private</strong> <strong class="jxr_keyword">final</strong> <strong class="jxr_keyword">double</strong> omega;
+<a class="jxr_linenumber" name="L46" href="#L46">46</a>      <em class="jxr_javadoccomment">/** Inverse cumulative probability accuracy. */</em>
+<a class="jxr_linenumber" name="L47" href="#L47">47</a>      <strong class="jxr_keyword">private</strong> <strong class="jxr_keyword">final</strong> <strong class="jxr_keyword">double</strong> inverseAbsoluteAccuracy;
+<a class="jxr_linenumber" name="L48" href="#L48">48</a>  
+<a class="jxr_linenumber" name="L49" href="#L49">49</a>      <em class="jxr_javadoccomment">/**</em>
+<a class="jxr_linenumber" name="L50" href="#L50">50</a>  <em class="jxr_javadoccomment">     * Build a new instance.</em>
+<a class="jxr_linenumber" name="L51" href="#L51">51</a>  <em class="jxr_javadoccomment">     *</em>
+<a class="jxr_linenumber" name="L52" href="#L52">52</a>  <em class="jxr_javadoccomment">     * @param mu shape parameter</em>
+<a class="jxr_linenumber" name="L53" href="#L53">53</a>  <em class="jxr_javadoccomment">     * @param omega scale parameter (must be positive)</em>
+<a class="jxr_linenumber" name="L54" href="#L54">54</a>  <em class="jxr_javadoccomment">     * @throws NumberIsTooSmallException if {@code mu &lt; 0.5}</em>
+<a class="jxr_linenumber" name="L55" href="#L55">55</a>  <em class="jxr_javadoccomment">     * @throws NotStrictlyPositiveException if {@code omega &lt;= 0}</em>
+<a class="jxr_linenumber" name="L56" href="#L56">56</a>  <em class="jxr_javadoccomment">     */</em>
+<a class="jxr_linenumber" name="L57" href="#L57">57</a>      <strong class="jxr_keyword">public</strong> <a href="../../../../../org/apache/commons/math3/distribution/NakagamiDistribution.html">NakagamiDistribution</a>(<strong class="jxr_keyword">double</strong> mu, <strong class="jxr_keyword">double</strong> omega) {
+<a class="jxr_linenumber" name="L58" href="#L58">58</a>          <strong class="jxr_keyword">this</strong>(mu, omega, DEFAULT_INVERSE_ABSOLUTE_ACCURACY);
+<a class="jxr_linenumber" name="L59" href="#L59">59</a>      }
+<a class="jxr_linenumber" name="L60" href="#L60">60</a>  
+<a class="jxr_linenumber" name="L61" href="#L61">61</a>      <em class="jxr_javadoccomment">/**</em>
+<a class="jxr_linenumber" name="L62" href="#L62">62</a>  <em class="jxr_javadoccomment">     * Build a new instance.</em>
+<a class="jxr_linenumber" name="L63" href="#L63">63</a>  <em class="jxr_javadoccomment">     *</em>
+<a class="jxr_linenumber" name="L64" href="#L64">64</a>  <em class="jxr_javadoccomment">     * @param mu shape parameter</em>
+<a class="jxr_linenumber" name="L65" href="#L65">65</a>  <em class="jxr_javadoccomment">     * @param omega scale parameter (must be positive)</em>
+<a class="jxr_linenumber" name="L66" href="#L66">66</a>  <em class="jxr_javadoccomment">     * @param inverseAbsoluteAccuracy the maximum absolute error in inverse</em>
+<a class="jxr_linenumber" name="L67" href="#L67">67</a>  <em class="jxr_javadoccomment">     * cumulative probability estimates (defaults to {@link #DEFAULT_INVERSE_ABSOLUTE_ACCURACY}).</em>
+<a class="jxr_linenumber" name="L68" href="#L68">68</a>  <em class="jxr_javadoccomment">     * @throws NumberIsTooSmallException if {@code mu &lt; 0.5}</em>
+<a class="jxr_linenumber" name="L69" href="#L69">69</a>  <em class="jxr_javadoccomment">     * @throws NotStrictlyPositiveException if {@code omega &lt;= 0}</em>
+<a class="jxr_linenumber" name="L70" href="#L70">70</a>  <em class="jxr_javadoccomment">     */</em>
+<a class="jxr_linenumber" name="L71" href="#L71">71</a>      <strong class="jxr_keyword">public</strong> <a href="../../../../../org/apache/commons/math3/distribution/NakagamiDistribution.html">NakagamiDistribution</a>(<strong class="jxr_keyword">double</strong> mu, <strong class="jxr_keyword">double</strong> omega, <strong class="jxr_keyword">double</strong> inverseAbsoluteAccuracy) {
+<a class="jxr_linenumber" name="L72" href="#L72">72</a>          <strong class="jxr_keyword">this</strong>(<strong class="jxr_keyword">new</strong> <a href="../../../../../org/apache/commons/math3/random/Well19937c.html">Well19937c</a>(), mu, omega, inverseAbsoluteAccuracy);
+<a class="jxr_linenumber" name="L73" href="#L73">73</a>      }
+<a class="jxr_linenumber" name="L74" href="#L74">74</a>  
+<a class="jxr_linenumber" name="L75" href="#L75">75</a>      <em class="jxr_javadoccomment">/**</em>
+<a class="jxr_linenumber" name="L76" href="#L76">76</a>  <em class="jxr_javadoccomment">     * Build a new instance.</em>
+<a class="jxr_linenumber" name="L77" href="#L77">77</a>  <em class="jxr_javadoccomment">     *</em>
+<a class="jxr_linenumber" name="L78" href="#L78">78</a>  <em class="jxr_javadoccomment">     * @param rng Random number generator</em>
+<a class="jxr_linenumber" name="L79" href="#L79">79</a>  <em class="jxr_javadoccomment">     * @param mu shape parameter</em>
+<a class="jxr_linenumber" name="L80" href="#L80">80</a>  <em class="jxr_javadoccomment">     * @param omega scale parameter (must be positive)</em>
+<a class="jxr_linenumber" name="L81" href="#L81">81</a>  <em class="jxr_javadoccomment">     * @param inverseAbsoluteAccuracy the maximum absolute error in inverse</em>
+<a class="jxr_linenumber" name="L82" href="#L82">82</a>  <em class="jxr_javadoccomment">     * cumulative probability estimates (defaults to {@link #DEFAULT_INVERSE_ABSOLUTE_ACCURACY}).</em>
+<a class="jxr_linenumber" name="L83" href="#L83">83</a>  <em class="jxr_javadoccomment">     * @throws NumberIsTooSmallException if {@code mu &lt; 0.5}</em>
+<a class="jxr_linenumber" name="L84" href="#L84">84</a>  <em class="jxr_javadoccomment">     * @throws NotStrictlyPositiveException if {@code omega &lt;= 0}</em>
+<a class="jxr_linenumber" name="L85" href="#L85">85</a>  <em class="jxr_javadoccomment">     */</em>
+<a class="jxr_linenumber" name="L86" href="#L86">86</a>      <strong class="jxr_keyword">public</strong> <a href="../../../../../org/apache/commons/math3/distribution/NakagamiDistribution.html">NakagamiDistribution</a>(<a href="../../../../../org/apache/commons/math3/random/RandomGenerator.html">RandomGenerator</a> rng, <strong class="jxr_keyword">double</strong> mu, <strong class="jxr_keyword">double</strong> omega, <strong class="jxr_keyword">double</strong> inverseAbsoluteAccuracy) {
+<a class="jxr_linenumber" name="L87" href="#L87">87</a>          <strong class="jxr_keyword">super</strong>(rng);
+<a class="jxr_linenumber" name="L88" href="#L88">88</a>  
+<a class="jxr_linenumber" name="L89" href="#L89">89</a>          <strong class="jxr_keyword">if</strong> (mu &lt; 0.5) {
+<a class="jxr_linenumber" name="L90" href="#L90">90</a>              <strong class="jxr_keyword">throw</strong> <strong class="jxr_keyword">new</strong> <a href="../../../../../org/apache/commons/math3/exception/NumberIsTooSmallException.html">NumberIsTooSmallException</a>(mu, 0.5, <strong class="jxr_keyword">true</strong>);
+<a class="jxr_linenumber" name="L91" href="#L91">91</a>          }
+<a class="jxr_linenumber" name="L92" href="#L92">92</a>          <strong class="jxr_keyword">if</strong> (omega &lt;= 0) {
+<a class="jxr_linenumber" name="L93" href="#L93">93</a>              <strong class="jxr_keyword">throw</strong> <strong class="jxr_keyword">new</strong> <a href="../../../../../org/apache/commons/math3/exception/NotStrictlyPositiveException.html">NotStrictlyPositiveException</a>(LocalizedFormats.NOT_POSITIVE_SCALE, omega);
+<a class="jxr_linenumber" name="L94" href="#L94">94</a>          }
+<a class="jxr_linenumber" name="L95" href="#L95">95</a>  
+<a class="jxr_linenumber" name="L96" href="#L96">96</a>          <strong class="jxr_keyword">this</strong>.mu = mu;
+<a class="jxr_linenumber" name="L97" href="#L97">97</a>          <strong class="jxr_keyword">this</strong>.omega = omega;
+<a class="jxr_linenumber" name="L98" href="#L98">98</a>          <strong class="jxr_keyword">this</strong>.inverseAbsoluteAccuracy = inverseAbsoluteAccuracy;
+<a class="jxr_linenumber" name="L99" href="#L99">99</a>      }
+<a class="jxr_linenumber" name="L100" href="#L100">100</a> 
+<a class="jxr_linenumber" name="L101" href="#L101">101</a>     <em class="jxr_javadoccomment">/**</em>
+<a class="jxr_linenumber" name="L102" href="#L102">102</a> <em class="jxr_javadoccomment">     * Access the shape parameter, {@code mu}.</em>
+<a class="jxr_linenumber" name="L103" href="#L103">103</a> <em class="jxr_javadoccomment">     *</em>
+<a class="jxr_linenumber" name="L104" href="#L104">104</a> <em class="jxr_javadoccomment">     * @return the shape parameter.</em>
+<a class="jxr_linenumber" name="L105" href="#L105">105</a> <em class="jxr_javadoccomment">     */</em>
+<a class="jxr_linenumber" name="L106" href="#L106">106</a>     <strong class="jxr_keyword">public</strong> <strong class="jxr_keyword">double</strong> getShape() {
+<a class="jxr_linenumber" name="L107" href="#L107">107</a>         <strong class="jxr_keyword">return</strong> mu;
+<a class="jxr_linenumber" name="L108" href="#L108">108</a>     }
+<a class="jxr_linenumber" name="L109" href="#L109">109</a> 
+<a class="jxr_linenumber" name="L110" href="#L110">110</a>     <em class="jxr_javadoccomment">/**</em>
+<a class="jxr_linenumber" name="L111" href="#L111">111</a> <em class="jxr_javadoccomment">     * Access the scale parameter, {@code omega}.</em>
+<a class="jxr_linenumber" name="L112" href="#L112">112</a> <em class="jxr_javadoccomment">     *</em>
+<a class="jxr_linenumber" name="L113" href="#L113">113</a> <em class="jxr_javadoccomment">     * @return the scale parameter.</em>
+<a class="jxr_linenumber" name="L114" href="#L114">114</a> <em class="jxr_javadoccomment">     */</em>
+<a class="jxr_linenumber" name="L115" href="#L115">115</a>     <strong class="jxr_keyword">public</strong> <strong class="jxr_keyword">double</strong> getScale() {
+<a class="jxr_linenumber" name="L116" href="#L116">116</a>         <strong class="jxr_keyword">return</strong> omega;
+<a class="jxr_linenumber" name="L117" href="#L117">117</a>     }
+<a class="jxr_linenumber" name="L118" href="#L118">118</a> 
+<a class="jxr_linenumber" name="L119" href="#L119">119</a>     @Override
+<a class="jxr_linenumber" name="L120" href="#L120">120</a>     <strong class="jxr_keyword">protected</strong> <strong class="jxr_keyword">double</strong> getSolverAbsoluteAccuracy() {
+<a class="jxr_linenumber" name="L121" href="#L121">121</a>         <strong class="jxr_keyword">return</strong> inverseAbsoluteAccuracy;
+<a class="jxr_linenumber" name="L122" href="#L122">122</a>     }
+<a class="jxr_linenumber" name="L123" href="#L123">123</a> 
+<a class="jxr_linenumber" name="L124" href="#L124">124</a>     <em class="jxr_javadoccomment">/** {@inheritDoc} */</em>
+<a class="jxr_linenumber" name="L125" href="#L125">125</a>     <strong class="jxr_keyword">public</strong> <strong class="jxr_keyword">double</strong> density(<strong class="jxr_keyword">double</strong> x) {
+<a class="jxr_linenumber" name="L126" href="#L126">126</a>         <strong class="jxr_keyword">if</strong> (x &lt;= 0) {
+<a class="jxr_linenumber" name="L127" href="#L127">127</a>             <strong class="jxr_keyword">return</strong> 0.0;
+<a class="jxr_linenumber" name="L128" href="#L128">128</a>         }
+<a class="jxr_linenumber" name="L129" href="#L129">129</a>         <strong class="jxr_keyword">return</strong> 2.0 * FastMath.pow(mu, mu) / (Gamma.gamma(mu) * FastMath.pow(omega, mu)) *
+<a class="jxr_linenumber" name="L130" href="#L130">130</a>                      FastMath.pow(x, 2 * mu - 1) * FastMath.exp(-mu * x * x / omega);
+<a class="jxr_linenumber" name="L131" href="#L131">131</a>     }
+<a class="jxr_linenumber" name="L132" href="#L132">132</a> 
+<a class="jxr_linenumber" name="L133" href="#L133">133</a>     <em class="jxr_javadoccomment">/** {@inheritDoc} */</em>
+<a class="jxr_linenumber" name="L134" href="#L134">134</a>     <strong class="jxr_keyword">public</strong> <strong class="jxr_keyword">double</strong> cumulativeProbability(<strong class="jxr_keyword">double</strong> x) {
+<a class="jxr_linenumber" name="L135" href="#L135">135</a>         <strong class="jxr_keyword">return</strong> Gamma.regularizedGammaP(mu, mu * x * x / omega);
+<a class="jxr_linenumber" name="L136" href="#L136">136</a>     }
+<a class="jxr_linenumber" name="L137" href="#L137">137</a> 
+<a class="jxr_linenumber" name="L138" href="#L138">138</a>     <em class="jxr_javadoccomment">/** {@inheritDoc} */</em>
+<a class="jxr_linenumber" name="L139" href="#L139">139</a>     <strong class="jxr_keyword">public</strong> <strong class="jxr_keyword">double</strong> getNumericalMean() {
+<a class="jxr_linenumber" name="L140" href="#L140">140</a>         <strong class="jxr_keyword">return</strong> Gamma.gamma(mu + 0.5) / Gamma.gamma(mu) * FastMath.sqrt(omega / mu);
+<a class="jxr_linenumber" name="L141" href="#L141">141</a>     }
+<a class="jxr_linenumber" name="L142" href="#L142">142</a> 
+<a class="jxr_linenumber" name="L143" href="#L143">143</a>     <em class="jxr_javadoccomment">/** {@inheritDoc} */</em>
+<a class="jxr_linenumber" name="L144" href="#L144">144</a>     <strong class="jxr_keyword">public</strong> <strong class="jxr_keyword">double</strong> getNumericalVariance() {
+<a class="jxr_linenumber" name="L145" href="#L145">145</a>         <strong class="jxr_keyword">double</strong> v = Gamma.gamma(mu + 0.5) / Gamma.gamma(mu);
+<a class="jxr_linenumber" name="L146" href="#L146">146</a>         <strong class="jxr_keyword">return</strong> omega * (1 - 1 / mu * v * v);
+<a class="jxr_linenumber" name="L147" href="#L147">147</a>     }
+<a class="jxr_linenumber" name="L148" href="#L148">148</a> 
+<a class="jxr_linenumber" name="L149" href="#L149">149</a>     <em class="jxr_javadoccomment">/** {@inheritDoc} */</em>
+<a class="jxr_linenumber" name="L150" href="#L150">150</a>     <strong class="jxr_keyword">public</strong> <strong class="jxr_keyword">double</strong> getSupportLowerBound() {
+<a class="jxr_linenumber" name="L151" href="#L151">151</a>         <strong class="jxr_keyword">return</strong> 0;
+<a class="jxr_linenumber" name="L152" href="#L152">152</a>     }
+<a class="jxr_linenumber" name="L153" href="#L153">153</a> 
+<a class="jxr_linenumber" name="L154" href="#L154">154</a>     <em class="jxr_javadoccomment">/** {@inheritDoc} */</em>
+<a class="jxr_linenumber" name="L155" href="#L155">155</a>     <strong class="jxr_keyword">public</strong> <strong class="jxr_keyword">double</strong> getSupportUpperBound() {
+<a class="jxr_linenumber" name="L156" href="#L156">156</a>         <strong class="jxr_keyword">return</strong> Double.POSITIVE_INFINITY;
+<a class="jxr_linenumber" name="L157" href="#L157">157</a>     }
+<a class="jxr_linenumber" name="L158" href="#L158">158</a> 
+<a class="jxr_linenumber" name="L159" href="#L159">159</a>     <em class="jxr_javadoccomment">/** {@inheritDoc} */</em>
+<a class="jxr_linenumber" name="L160" href="#L160">160</a>     <strong class="jxr_keyword">public</strong> <strong class="jxr_keyword">boolean</strong> isSupportLowerBoundInclusive() {
+<a class="jxr_linenumber" name="L161" href="#L161">161</a>         <strong class="jxr_keyword">return</strong> <strong class="jxr_keyword">true</strong>;
+<a class="jxr_linenumber" name="L162" href="#L162">162</a>     }
+<a class="jxr_linenumber" name="L163" href="#L163">163</a> 
+<a class="jxr_linenumber" name="L164" href="#L164">164</a>     <em class="jxr_javadoccomment">/** {@inheritDoc} */</em>
+<a class="jxr_linenumber" name="L165" href="#L165">165</a>     <strong class="jxr_keyword">public</strong> <strong class="jxr_keyword">boolean</strong> isSupportUpperBoundInclusive() {
+<a class="jxr_linenumber" name="L166" href="#L166">166</a>         <strong class="jxr_keyword">return</strong> false;
+<a class="jxr_linenumber" name="L167" href="#L167">167</a>     }
+<a class="jxr_linenumber" name="L168" href="#L168">168</a> 
+<a class="jxr_linenumber" name="L169" href="#L169">169</a>     <em class="jxr_javadoccomment">/** {@inheritDoc} */</em>
+<a class="jxr_linenumber" name="L170" href="#L170">170</a>     <strong class="jxr_keyword">public</strong> <strong class="jxr_keyword">boolean</strong> isSupportConnected() {
+<a class="jxr_linenumber" name="L171" href="#L171">171</a>         <strong class="jxr_keyword">return</strong> <strong class="jxr_keyword">true</strong>;
+<a class="jxr_linenumber" name="L172" href="#L172">172</a>     }
+<a class="jxr_linenumber" name="L173" href="#L173">173</a> 
+<a class="jxr_linenumber" name="L174" href="#L174">174</a> }
+</pre>
+<hr/>
+<div id="footer">Copyright &#169; 2003&#x2013;2014 <a href="http://www.apache.org/">The Apache Software Foundation</a>. All rights reserved.</div>
+</body>
+</html>

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Added: websites/production/commons/content/proper/commons-math/xref/org/apache/commons/math3/fitting/leastsquares/EvaluationRmsChecker.html
==============================================================================
--- websites/production/commons/content/proper/commons-math/xref/org/apache/commons/math3/fitting/leastsquares/EvaluationRmsChecker.html (added)
+++ websites/production/commons/content/proper/commons-math/xref/org/apache/commons/math3/fitting/leastsquares/EvaluationRmsChecker.html Sat Oct 18 20:10:38 2014
@@ -0,0 +1,88 @@
+<!DOCTYPE html PUBLIC "-//W3C//DTD XHTML 1.0 Transitional//EN" "http://www.w3.org/TR/xhtml1/DTD/xhtml1-transitional.dtd">
+<html xmlns="http://www.w3.org/1999/xhtml" xml:lang="en" lang="en">
+<head><meta http-equiv="content-type" content="text/html; charset=UTF-8" />
+<title>EvaluationRmsChecker xref</title>
+<link type="text/css" rel="stylesheet" href="../../../../../../stylesheet.css" />
+</head>
+<body>
+<div id="overview"><a href="../../../../../../../apidocs/org/apache/commons/math3/fitting/leastsquares/EvaluationRmsChecker.html">View Javadoc</a></div><pre>
+<a class="jxr_linenumber" name="L1" href="#L1">1</a>   <em class="jxr_comment">/*</em>
+<a class="jxr_linenumber" name="L2" href="#L2">2</a>   <em class="jxr_comment"> * Licensed to the Apache Software Foundation (ASF) under one or more</em>
+<a class="jxr_linenumber" name="L3" href="#L3">3</a>   <em class="jxr_comment"> * contributor license agreements.  See the NOTICE file distributed with</em>
+<a class="jxr_linenumber" name="L4" href="#L4">4</a>   <em class="jxr_comment"> * this work for additional information regarding copyright ownership.</em>
+<a class="jxr_linenumber" name="L5" href="#L5">5</a>   <em class="jxr_comment"> * The ASF licenses this file to You under the Apache License, Version 2.0</em>
+<a class="jxr_linenumber" name="L6" href="#L6">6</a>   <em class="jxr_comment"> * (the "License"); you may not use this file except in compliance with</em>
+<a class="jxr_linenumber" name="L7" href="#L7">7</a>   <em class="jxr_comment"> * the License.  You may obtain a copy of the License at</em>
+<a class="jxr_linenumber" name="L8" href="#L8">8</a>   <em class="jxr_comment"> *</em>
+<a class="jxr_linenumber" name="L9" href="#L9">9</a>   <em class="jxr_comment"> *      <a href="http://www.apache.org/licenses/LICENSE-2." target="alexandria_uri">http://www.apache.org/licenses/LICENSE-2.</a>0</em>
+<a class="jxr_linenumber" name="L10" href="#L10">10</a>  <em class="jxr_comment"> *</em>
+<a class="jxr_linenumber" name="L11" href="#L11">11</a>  <em class="jxr_comment"> * Unless required by applicable law or agreed to in writing, software</em>
+<a class="jxr_linenumber" name="L12" href="#L12">12</a>  <em class="jxr_comment"> * distributed under the License is distributed on an "AS IS" BASIS,</em>
+<a class="jxr_linenumber" name="L13" href="#L13">13</a>  <em class="jxr_comment"> * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.</em>
+<a class="jxr_linenumber" name="L14" href="#L14">14</a>  <em class="jxr_comment"> * See the License for the specific language governing permissions and</em>
+<a class="jxr_linenumber" name="L15" href="#L15">15</a>  <em class="jxr_comment"> * limitations under the License.</em>
+<a class="jxr_linenumber" name="L16" href="#L16">16</a>  <em class="jxr_comment"> */</em>
+<a class="jxr_linenumber" name="L17" href="#L17">17</a>  <strong class="jxr_keyword">package</strong> org.apache.commons.math3.fitting.leastsquares;
+<a class="jxr_linenumber" name="L18" href="#L18">18</a>  
+<a class="jxr_linenumber" name="L19" href="#L19">19</a>  <strong class="jxr_keyword">import</strong> org.apache.commons.math3.fitting.leastsquares.LeastSquaresProblem.Evaluation;
+<a class="jxr_linenumber" name="L20" href="#L20">20</a>  <strong class="jxr_keyword">import</strong> org.apache.commons.math3.optim.ConvergenceChecker;
+<a class="jxr_linenumber" name="L21" href="#L21">21</a>  <strong class="jxr_keyword">import</strong> org.apache.commons.math3.util.Precision;
+<a class="jxr_linenumber" name="L22" href="#L22">22</a>  
+<a class="jxr_linenumber" name="L23" href="#L23">23</a>  <em class="jxr_javadoccomment">/**</em>
+<a class="jxr_linenumber" name="L24" href="#L24">24</a>  <em class="jxr_javadoccomment"> * Check if an optimization has converged based on the change in computed RMS.</em>
+<a class="jxr_linenumber" name="L25" href="#L25">25</a>  <em class="jxr_javadoccomment"> *</em>
+<a class="jxr_linenumber" name="L26" href="#L26">26</a>  <em class="jxr_javadoccomment"> * @since 3.4</em>
+<a class="jxr_linenumber" name="L27" href="#L27">27</a>  <em class="jxr_javadoccomment"> */</em>
+<a class="jxr_linenumber" name="L28" href="#L28">28</a>  <strong class="jxr_keyword">public</strong> <strong class="jxr_keyword">class</strong> <a href="../../../../../../org/apache/commons/math3/fitting/leastsquares/EvaluationRmsChecker.html">EvaluationRmsChecker</a> <strong class="jxr_keyword">implements</strong> ConvergenceChecker&lt;Evaluation&gt; {
+<a class="jxr_linenumber" name="L29" href="#L29">29</a>  
+<a class="jxr_linenumber" name="L30" href="#L30">30</a>      <em class="jxr_javadoccomment">/** relative tolerance for comparisons. */</em>
+<a class="jxr_linenumber" name="L31" href="#L31">31</a>      <strong class="jxr_keyword">private</strong> <strong class="jxr_keyword">final</strong> <strong class="jxr_keyword">double</strong> relTol;
+<a class="jxr_linenumber" name="L32" href="#L32">32</a>      <em class="jxr_javadoccomment">/** absolute tolerance for comparisons. */</em>
+<a class="jxr_linenumber" name="L33" href="#L33">33</a>      <strong class="jxr_keyword">private</strong> <strong class="jxr_keyword">final</strong> <strong class="jxr_keyword">double</strong> absTol;
+<a class="jxr_linenumber" name="L34" href="#L34">34</a>  
+<a class="jxr_linenumber" name="L35" href="#L35">35</a>      <em class="jxr_javadoccomment">/**</em>
+<a class="jxr_linenumber" name="L36" href="#L36">36</a>  <em class="jxr_javadoccomment">     * Create a convergence checker for the RMS with the same relative and absolute</em>
+<a class="jxr_linenumber" name="L37" href="#L37">37</a>  <em class="jxr_javadoccomment">     * tolerance.</em>
+<a class="jxr_linenumber" name="L38" href="#L38">38</a>  <em class="jxr_javadoccomment">     *</em>
+<a class="jxr_linenumber" name="L39" href="#L39">39</a>  <em class="jxr_javadoccomment">     * &lt;p&gt;Convenience constructor for when the relative and absolute tolerances are the</em>
+<a class="jxr_linenumber" name="L40" href="#L40">40</a>  <em class="jxr_javadoccomment">     * same. Same as {@code new EvaluationRmsChecker(tol, tol)}.</em>
+<a class="jxr_linenumber" name="L41" href="#L41">41</a>  <em class="jxr_javadoccomment">     *</em>
+<a class="jxr_linenumber" name="L42" href="#L42">42</a>  <em class="jxr_javadoccomment">     * @param tol the relative and absolute tolerance.</em>
+<a class="jxr_linenumber" name="L43" href="#L43">43</a>  <em class="jxr_javadoccomment">     * @see #EvaluationRmsChecker(double, double)</em>
+<a class="jxr_linenumber" name="L44" href="#L44">44</a>  <em class="jxr_javadoccomment">     */</em>
+<a class="jxr_linenumber" name="L45" href="#L45">45</a>      <strong class="jxr_keyword">public</strong> <a href="../../../../../../org/apache/commons/math3/fitting/leastsquares/EvaluationRmsChecker.html">EvaluationRmsChecker</a>(<strong class="jxr_keyword">final</strong> <strong class="jxr_keyword">double</strong> tol) {
+<a class="jxr_linenumber" name="L46" href="#L46">46</a>          <strong class="jxr_keyword">this</strong>(tol, tol);
+<a class="jxr_linenumber" name="L47" href="#L47">47</a>      }
+<a class="jxr_linenumber" name="L48" href="#L48">48</a>  
+<a class="jxr_linenumber" name="L49" href="#L49">49</a>      <em class="jxr_javadoccomment">/**</em>
+<a class="jxr_linenumber" name="L50" href="#L50">50</a>  <em class="jxr_javadoccomment">     * Create a convergence checker for the RMS with a relative and absolute tolerance.</em>
+<a class="jxr_linenumber" name="L51" href="#L51">51</a>  <em class="jxr_javadoccomment">     *</em>
+<a class="jxr_linenumber" name="L52" href="#L52">52</a>  <em class="jxr_javadoccomment">     * &lt;p&gt;The optimization has converged when the RMS of consecutive evaluations are equal</em>
+<a class="jxr_linenumber" name="L53" href="#L53">53</a>  <em class="jxr_javadoccomment">     * to within the given relative tolerance or absolute tolerance.</em>
+<a class="jxr_linenumber" name="L54" href="#L54">54</a>  <em class="jxr_javadoccomment">     *</em>
+<a class="jxr_linenumber" name="L55" href="#L55">55</a>  <em class="jxr_javadoccomment">     * @param relTol the relative tolerance.</em>
+<a class="jxr_linenumber" name="L56" href="#L56">56</a>  <em class="jxr_javadoccomment">     * @param absTol the absolute tolerance.</em>
+<a class="jxr_linenumber" name="L57" href="#L57">57</a>  <em class="jxr_javadoccomment">     * @see Precision#equals(double, double, double)</em>
+<a class="jxr_linenumber" name="L58" href="#L58">58</a>  <em class="jxr_javadoccomment">     * @see Precision#equalsWithRelativeTolerance(double, double, double)</em>
+<a class="jxr_linenumber" name="L59" href="#L59">59</a>  <em class="jxr_javadoccomment">     */</em>
+<a class="jxr_linenumber" name="L60" href="#L60">60</a>      <strong class="jxr_keyword">public</strong> <a href="../../../../../../org/apache/commons/math3/fitting/leastsquares/EvaluationRmsChecker.html">EvaluationRmsChecker</a>(<strong class="jxr_keyword">final</strong> <strong class="jxr_keyword">double</strong> relTol, <strong class="jxr_keyword">final</strong> <strong class="jxr_keyword">double</strong> absTol) {
+<a class="jxr_linenumber" name="L61" href="#L61">61</a>          <strong class="jxr_keyword">this</strong>.relTol = relTol;
+<a class="jxr_linenumber" name="L62" href="#L62">62</a>          <strong class="jxr_keyword">this</strong>.absTol = absTol;
+<a class="jxr_linenumber" name="L63" href="#L63">63</a>      }
+<a class="jxr_linenumber" name="L64" href="#L64">64</a>  
+<a class="jxr_linenumber" name="L65" href="#L65">65</a>      <em class="jxr_javadoccomment">/** {@inheritDoc} */</em>
+<a class="jxr_linenumber" name="L66" href="#L66">66</a>      <strong class="jxr_keyword">public</strong> <strong class="jxr_keyword">boolean</strong> converged(<strong class="jxr_keyword">final</strong> <strong class="jxr_keyword">int</strong> iteration,
+<a class="jxr_linenumber" name="L67" href="#L67">67</a>                               <strong class="jxr_keyword">final</strong> <a href="../../../../../../org/apache/commons/math3/fitting/leastsquares/LeastSquaresProblem.html">Evaluation</a> previous,
+<a class="jxr_linenumber" name="L68" href="#L68">68</a>                               <strong class="jxr_keyword">final</strong> <a href="../../../../../../org/apache/commons/math3/fitting/leastsquares/LeastSquaresProblem.html">Evaluation</a> current) {
+<a class="jxr_linenumber" name="L69" href="#L69">69</a>          <strong class="jxr_keyword">final</strong> <strong class="jxr_keyword">double</strong> prevRms = previous.getRMS();
+<a class="jxr_linenumber" name="L70" href="#L70">70</a>          <strong class="jxr_keyword">final</strong> <strong class="jxr_keyword">double</strong> currRms = current.getRMS();
+<a class="jxr_linenumber" name="L71" href="#L71">71</a>          <strong class="jxr_keyword">return</strong> Precision.equals(prevRms, currRms, <strong class="jxr_keyword">this</strong>.absTol) ||
+<a class="jxr_linenumber" name="L72" href="#L72">72</a>                  Precision.equalsWithRelativeTolerance(prevRms, currRms, <strong class="jxr_keyword">this</strong>.relTol);
+<a class="jxr_linenumber" name="L73" href="#L73">73</a>      }
+<a class="jxr_linenumber" name="L74" href="#L74">74</a>  
+<a class="jxr_linenumber" name="L75" href="#L75">75</a>  }
+</pre>
+<hr/>
+<div id="footer">Copyright &#169; 2003&#x2013;2014 <a href="http://www.apache.org/">The Apache Software Foundation</a>. All rights reserved.</div>
+</body>
+</html>

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Added: websites/production/commons/content/proper/commons-math/xref/org/apache/commons/math3/fitting/leastsquares/ValueAndJacobianFunction.html
==============================================================================
--- websites/production/commons/content/proper/commons-math/xref/org/apache/commons/math3/fitting/leastsquares/ValueAndJacobianFunction.html (added)
+++ websites/production/commons/content/proper/commons-math/xref/org/apache/commons/math3/fitting/leastsquares/ValueAndJacobianFunction.html Sat Oct 18 20:10:38 2014
@@ -0,0 +1,57 @@
+<!DOCTYPE html PUBLIC "-//W3C//DTD XHTML 1.0 Transitional//EN" "http://www.w3.org/TR/xhtml1/DTD/xhtml1-transitional.dtd">
+<html xmlns="http://www.w3.org/1999/xhtml" xml:lang="en" lang="en">
+<head><meta http-equiv="content-type" content="text/html; charset=UTF-8" />
+<title>ValueAndJacobianFunction xref</title>
+<link type="text/css" rel="stylesheet" href="../../../../../../stylesheet.css" />
+</head>
+<body>
+<div id="overview"><a href="../../../../../../../apidocs/org/apache/commons/math3/fitting/leastsquares/ValueAndJacobianFunction.html">View Javadoc</a></div><pre>
+<a class="jxr_linenumber" name="L1" href="#L1">1</a>   <em class="jxr_comment">/*</em>
+<a class="jxr_linenumber" name="L2" href="#L2">2</a>   <em class="jxr_comment"> * Licensed to the Apache Software Foundation (ASF) under one or more</em>
+<a class="jxr_linenumber" name="L3" href="#L3">3</a>   <em class="jxr_comment"> * contributor license agreements.  See the NOTICE file distributed with</em>
+<a class="jxr_linenumber" name="L4" href="#L4">4</a>   <em class="jxr_comment"> * this work for additional information regarding copyright ownership.</em>
+<a class="jxr_linenumber" name="L5" href="#L5">5</a>   <em class="jxr_comment"> * The ASF licenses this file to You under the Apache License, Version 2.0</em>
+<a class="jxr_linenumber" name="L6" href="#L6">6</a>   <em class="jxr_comment"> * (the "License"); you may not use this file except in compliance with</em>
+<a class="jxr_linenumber" name="L7" href="#L7">7</a>   <em class="jxr_comment"> * the License.  You may obtain a copy of the License at</em>
+<a class="jxr_linenumber" name="L8" href="#L8">8</a>   <em class="jxr_comment"> *</em>
+<a class="jxr_linenumber" name="L9" href="#L9">9</a>   <em class="jxr_comment"> *      <a href="http://www.apache.org/licenses/LICENSE-2." target="alexandria_uri">http://www.apache.org/licenses/LICENSE-2.</a>0</em>
+<a class="jxr_linenumber" name="L10" href="#L10">10</a>  <em class="jxr_comment"> *</em>
+<a class="jxr_linenumber" name="L11" href="#L11">11</a>  <em class="jxr_comment"> * Unless required by applicable law or agreed to in writing, software</em>
+<a class="jxr_linenumber" name="L12" href="#L12">12</a>  <em class="jxr_comment"> * distributed under the License is distributed on an "AS IS" BASIS,</em>
+<a class="jxr_linenumber" name="L13" href="#L13">13</a>  <em class="jxr_comment"> * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.</em>
+<a class="jxr_linenumber" name="L14" href="#L14">14</a>  <em class="jxr_comment"> * See the License for the specific language governing permissions and</em>
+<a class="jxr_linenumber" name="L15" href="#L15">15</a>  <em class="jxr_comment"> * limitations under the License.</em>
+<a class="jxr_linenumber" name="L16" href="#L16">16</a>  <em class="jxr_comment"> */</em>
+<a class="jxr_linenumber" name="L17" href="#L17">17</a>  <strong class="jxr_keyword">package</strong> org.apache.commons.math3.fitting.leastsquares;
+<a class="jxr_linenumber" name="L18" href="#L18">18</a>  
+<a class="jxr_linenumber" name="L19" href="#L19">19</a>  <strong class="jxr_keyword">import</strong> org.apache.commons.math3.linear.RealMatrix;
+<a class="jxr_linenumber" name="L20" href="#L20">20</a>  <strong class="jxr_keyword">import</strong> org.apache.commons.math3.linear.RealVector;
+<a class="jxr_linenumber" name="L21" href="#L21">21</a>  
+<a class="jxr_linenumber" name="L22" href="#L22">22</a>  <em class="jxr_javadoccomment">/**</em>
+<a class="jxr_linenumber" name="L23" href="#L23">23</a>  <em class="jxr_javadoccomment"> * A interface for functions that compute a vector of values and can compute their</em>
+<a class="jxr_linenumber" name="L24" href="#L24">24</a>  <em class="jxr_javadoccomment"> * derivatives (Jacobian).</em>
+<a class="jxr_linenumber" name="L25" href="#L25">25</a>  <em class="jxr_javadoccomment"> *</em>
+<a class="jxr_linenumber" name="L26" href="#L26">26</a>  <em class="jxr_javadoccomment"> * @since 3.3</em>
+<a class="jxr_linenumber" name="L27" href="#L27">27</a>  <em class="jxr_javadoccomment"> */</em>
+<a class="jxr_linenumber" name="L28" href="#L28">28</a>  <strong class="jxr_keyword">public</strong> <strong class="jxr_keyword">interface</strong> <a href="../../../../../../org/apache/commons/math3/fitting/leastsquares/ValueAndJacobianFunction.html">ValueAndJacobianFunction</a> <strong class="jxr_keyword">extends</strong> <a href="../../../../../../org/apache/commons/math3/fitting/leastsquares/MultivariateJacobianFunction.html">MultivariateJacobianFunction</a> {
+<a class="jxr_linenumber" name="L29" href="#L29">29</a>      <em class="jxr_javadoccomment">/**</em>
+<a class="jxr_linenumber" name="L30" href="#L30">30</a>  <em class="jxr_javadoccomment">     * Compute the value.</em>
+<a class="jxr_linenumber" name="L31" href="#L31">31</a>  <em class="jxr_javadoccomment">     *</em>
+<a class="jxr_linenumber" name="L32" href="#L32">32</a>  <em class="jxr_javadoccomment">     * @param params Point.</em>
+<a class="jxr_linenumber" name="L33" href="#L33">33</a>  <em class="jxr_javadoccomment">     * @return the value at the given point.</em>
+<a class="jxr_linenumber" name="L34" href="#L34">34</a>  <em class="jxr_javadoccomment">     */</em>
+<a class="jxr_linenumber" name="L35" href="#L35">35</a>      <a href="../../../../../../org/apache/commons/math3/linear/RealVector.html">RealVector</a> computeValue(<strong class="jxr_keyword">final</strong> <strong class="jxr_keyword">double</strong>[] params);
+<a class="jxr_linenumber" name="L36" href="#L36">36</a>  
+<a class="jxr_linenumber" name="L37" href="#L37">37</a>      <em class="jxr_javadoccomment">/**</em>
+<a class="jxr_linenumber" name="L38" href="#L38">38</a>  <em class="jxr_javadoccomment">     * Compute the Jacobian.</em>
+<a class="jxr_linenumber" name="L39" href="#L39">39</a>  <em class="jxr_javadoccomment">     *</em>
+<a class="jxr_linenumber" name="L40" href="#L40">40</a>  <em class="jxr_javadoccomment">     * @param params Point.</em>
+<a class="jxr_linenumber" name="L41" href="#L41">41</a>  <em class="jxr_javadoccomment">     * @return the Jacobian at the given point.</em>
+<a class="jxr_linenumber" name="L42" href="#L42">42</a>  <em class="jxr_javadoccomment">     */</em>
+<a class="jxr_linenumber" name="L43" href="#L43">43</a>      <a href="../../../../../../org/apache/commons/math3/linear/RealMatrix.html">RealMatrix</a> computeJacobian(<strong class="jxr_keyword">final</strong> <strong class="jxr_keyword">double</strong>[] params);
+<a class="jxr_linenumber" name="L44" href="#L44">44</a>  }
+</pre>
+<hr/>
+<div id="footer">Copyright &#169; 2003&#x2013;2014 <a href="http://www.apache.org/">The Apache Software Foundation</a>. All rights reserved.</div>
+</body>
+</html>

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