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From lewi...@apache.org
Subject svn commit: r1705743 [6/7] - in /climate/site/trunk: content/api/ content/api/_sources/ content/api/_sources/config/ content/api/_sources/data_source/ content/api/_sources/ocw/ content/api/_sources/ui-backend/ content/api/_static/ content/api/config/ c...
Date Mon, 28 Sep 2015 18:53:10 GMT
Added: climate/site/trunk/content/api/ocw/plotter.html
URL: http://svn.apache.org/viewvc/climate/site/trunk/content/api/ocw/plotter.html?rev=1705743&view=auto
==============================================================================
--- climate/site/trunk/content/api/ocw/plotter.html (added)
+++ climate/site/trunk/content/api/ocw/plotter.html Mon Sep 28 18:53:09 2015
@@ -0,0 +1,416 @@
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+  <div class="section" id="module-plotter">
+<span id="plotter-module"></span><h1>Plotter Module<a class="headerlink" href="#module-plotter" title="Permalink to this headline">¶</a></h1>
+<dl class="class">
+<dt id="plotter.TaylorDiagram">
+<em class="property">class </em><tt class="descclassname">plotter.</tt><tt class="descname">TaylorDiagram</tt><big>(</big><em>refstd</em>, <em>radmax=1.5</em>, <em>fig=None</em>, <em>rect=111</em>, <em>label='_'</em><big>)</big><a class="headerlink" href="#plotter.TaylorDiagram" title="Permalink to this definition">¶</a></dt>
+<dd><p>Taylor diagram helper class</p>
+<p>Plot model standard deviation and correlation to reference (data)
+sample in a single-quadrant polar plot, with r=stddev and
+theta=arccos(correlation).</p>
+<p>This class was released as public domain by the original author
+Yannick Copin. You can find the original Gist where it was
+released at: <a class="reference external" href="https://gist.github.com/ycopin/3342888">https://gist.github.com/ycopin/3342888</a></p>
+<p>Set up Taylor diagram axes, i.e. single quadrant polar
+plot, using mpl_toolkits.axisartist.floating_axes. refstd is
+the reference standard deviation to be compared to.</p>
+<dl class="method">
+<dt id="plotter.TaylorDiagram.add_contours">
+<tt class="descname">add_contours</tt><big>(</big><em>std1</em>, <em>corr1</em>, <em>std2</em>, <em>corr2</em>, <em>**kwargs</em><big>)</big><a class="headerlink" href="#plotter.TaylorDiagram.add_contours" title="Permalink to this definition">¶</a></dt>
+<dd><p>Add a line between two points
+[std1, corr1] and [std2, corr2]</p>
+</dd></dl>
+
+<dl class="method">
+<dt id="plotter.TaylorDiagram.add_rms_contours">
+<tt class="descname">add_rms_contours</tt><big>(</big><em>levels=5</em>, <em>**kwargs</em><big>)</big><a class="headerlink" href="#plotter.TaylorDiagram.add_rms_contours" title="Permalink to this definition">¶</a></dt>
+<dd><p>Add constant centered RMS difference contours.</p>
+</dd></dl>
+
+<dl class="method">
+<dt id="plotter.TaylorDiagram.add_sample">
+<tt class="descname">add_sample</tt><big>(</big><em>stddev</em>, <em>corrcoef</em>, <em>*args</em>, <em>**kwargs</em><big>)</big><a class="headerlink" href="#plotter.TaylorDiagram.add_sample" title="Permalink to this definition">¶</a></dt>
+<dd><p>Add sample (stddev,corrcoeff) to the Taylor diagram. args
+and kwargs are directly propagated to the Figure.plot
+command.</p>
+</dd></dl>
+
+<dl class="method">
+<dt id="plotter.TaylorDiagram.add_stddev_contours">
+<tt class="descname">add_stddev_contours</tt><big>(</big><em>std</em>, <em>corr1</em>, <em>corr2</em>, <em>**kwargs</em><big>)</big><a class="headerlink" href="#plotter.TaylorDiagram.add_stddev_contours" title="Permalink to this definition">¶</a></dt>
+<dd><p>Add a curved line with a radius of std between two points
+[std, corr1] and [std, corr2]</p>
+</dd></dl>
+
+</dd></dl>
+
+<dl class="function">
+<dt id="plotter.draw_barchart">
+<tt class="descclassname">plotter.</tt><tt class="descname">draw_barchart</tt><big>(</big><em>results</em>, <em>yvalues</em>, <em>fname</em>, <em>ptitle=''</em>, <em>fmt='png'</em>, <em>xlabel=''</em>, <em>ylabel=''</em><big>)</big><a class="headerlink" href="#plotter.draw_barchart" title="Permalink to this definition">¶</a></dt>
+<dd><p>Draw a barchart.</p>
+<table class="docutils field-list" frame="void" rules="none">
+<col class="field-name" />
+<col class="field-body" />
+<tbody valign="top">
+<tr class="field-odd field"><th class="field-name">Parameters:</th><td class="field-body"><ul class="first last simple">
+<li><strong>results</strong> (<a class="reference external" href="http://docs.scipy.org/doc/numpy/reference/generated/numpy.ndarray.html#numpy.ndarray" title="(in NumPy v1.9)"><tt class="xref py py-class docutils literal"><span class="pre">numpy.ndarray</span></tt></a>) &#8211; 1D array of  data.</li>
+<li><strong>yvalues</strong> &#8211; List of y-axis labels</li>
+<li><strong>fname</strong> (<a class="reference external" href="http://docs.python.org/2/library/string.html#module-string" title="(in Python v2.7)"><tt class="xref py py-mod docutils literal"><span class="pre">string</span></tt></a>) &#8211; Filename of the plot.</li>
+<li><strong>ptitle</strong> (<a class="reference external" href="http://docs.python.org/2/library/string.html#module-string" title="(in Python v2.7)"><tt class="xref py py-mod docutils literal"><span class="pre">string</span></tt></a>) &#8211; (Optional) plot title.</li>
+<li><strong>fmt</strong> (<a class="reference external" href="http://docs.python.org/2/library/string.html#module-string" title="(in Python v2.7)"><tt class="xref py py-mod docutils literal"><span class="pre">string</span></tt></a>) &#8211; (Optional) filetype for the output.</li>
+<li><strong>xlabel</strong> (<a class="reference external" href="http://docs.python.org/2/library/string.html#module-string" title="(in Python v2.7)"><tt class="xref py py-mod docutils literal"><span class="pre">string</span></tt></a>) &#8211; (Optional) x-axis title.</li>
+<li><strong>ylabel</strong> (<a class="reference external" href="http://docs.python.org/2/library/string.html#module-string" title="(in Python v2.7)"><tt class="xref py py-mod docutils literal"><span class="pre">string</span></tt></a>) &#8211; (Optional) y-axis title.</li>
+</ul>
+</td>
+</tr>
+</tbody>
+</table>
+</dd></dl>
+
+<dl class="function">
+<dt id="plotter.draw_contour_map">
+<tt class="descclassname">plotter.</tt><tt class="descname">draw_contour_map</tt><big>(</big><em>dataset</em>, <em>lats</em>, <em>lons</em>, <em>fname</em>, <em>fmt='png'</em>, <em>gridshape=(1</em>, <em>1)</em>, <em>clabel=''</em>, <em>ptitle=''</em>, <em>subtitles=None</em>, <em>cmap=None</em>, <em>clevs=None</em>, <em>nlevs=10</em>, <em>parallels=None</em>, <em>meridians=None</em>, <em>extend='neither'</em>, <em>aspect=3.4</em><big>)</big><a class="headerlink" href="#plotter.draw_contour_map" title="Permalink to this definition">¶</a></dt>
+<dd><p>Draw a multiple panel contour map plot.</p>
+<table class="docutils field-list" frame="void" rules="none">
+<col class="field-name" />
+<col class="field-body" />
+<tbody valign="top">
+<tr class="field-odd field"><th class="field-name">Parameters:</th><td class="field-body"><ul class="first last simple">
+<li><strong>dataset</strong> (<a class="reference external" href="http://docs.scipy.org/doc/numpy/reference/generated/numpy.ndarray.html#numpy.ndarray" title="(in NumPy v1.9)"><tt class="xref py py-class docutils literal"><span class="pre">numpy.ndarray</span></tt></a>) &#8211; 3D array of data to be plotted with shape (nT, nLat, nLon).</li>
+<li><strong>lats</strong> (<a class="reference external" href="http://docs.scipy.org/doc/numpy/reference/generated/numpy.ndarray.html#numpy.ndarray" title="(in NumPy v1.9)"><tt class="xref py py-class docutils literal"><span class="pre">numpy.ndarray</span></tt></a>) &#8211; Array of latitudes values.</li>
+<li><strong>lons</strong> (<a class="reference external" href="http://docs.scipy.org/doc/numpy/reference/generated/numpy.ndarray.html#numpy.ndarray" title="(in NumPy v1.9)"><tt class="xref py py-class docutils literal"><span class="pre">numpy.ndarray</span></tt></a>) &#8211; Array of longitudes</li>
+<li><strong>fname</strong> (<a class="reference external" href="http://docs.python.org/2/library/string.html#module-string" title="(in Python v2.7)"><tt class="xref py py-mod docutils literal"><span class="pre">string</span></tt></a>) &#8211; The filename of the plot.</li>
+<li><strong>fmt</strong> (<a class="reference external" href="http://docs.python.org/2/library/string.html#module-string" title="(in Python v2.7)"><tt class="xref py py-mod docutils literal"><span class="pre">string</span></tt></a>) &#8211; (Optional) filetype for the output.</li>
+<li><strong>gridshape</strong> (<a class="reference external" href="http://docs.python.org/2/library/functions.html#tuple" title="(in Python v2.7)"><tt class="xref py py-func docutils literal"><span class="pre">tuple()</span></tt></a> of the form (num_rows, num_cols)) &#8211; (Optional) tuple denoting the desired grid shape
+(num_rows, num_cols) for arranging the subplots.</li>
+<li><strong>clabel</strong> (<a class="reference external" href="http://docs.python.org/2/library/string.html#module-string" title="(in Python v2.7)"><tt class="xref py py-mod docutils literal"><span class="pre">string</span></tt></a>) &#8211; (Optional) colorbar title.</li>
+<li><strong>ptitle</strong> (<a class="reference external" href="http://docs.python.org/2/library/string.html#module-string" title="(in Python v2.7)"><tt class="xref py py-mod docutils literal"><span class="pre">string</span></tt></a>) &#8211; (Optional) plot title.</li>
+<li><strong>subtitles</strong> (<a class="reference external" href="http://docs.python.org/2/library/functions.html#list" title="(in Python v2.7)"><tt class="xref py py-class docutils literal"><span class="pre">list</span></tt></a> of <a class="reference external" href="http://docs.python.org/2/library/string.html#module-string" title="(in Python v2.7)"><tt class="xref py py-mod docutils literal"><span class="pre">string</span></tt></a>) &#8211; (Optional) list of titles for each subplot.</li>
+<li><strong>cmap</strong> (<a class="reference external" href="http://docs.python.org/2/library/string.html#module-string" title="(in Python v2.7)"><tt class="xref py py-mod docutils literal"><span class="pre">string</span></tt></a> or <a class="reference external" href="http://matplotlib.sourceforge.net/api/colors_api.html#matplotlib.colors.LinearSegmentedColormap" title="(in Matplotlib v1.4.3)"><tt class="xref py py-class docutils literal"><span class="pre">matplotlib.colors.LinearSegmentedColormap</span></tt></a>) &#8211; (Optional) string or <a class="reference external" href="http://matplotlib.sourceforge.net/api/colors_api.html#matplotlib.colors.LinearSegmentedColormap" title="(in Matplotlib v1.4.3)"><tt class="xref py py-class docutils literal"><span class="pre">matplotlib.colors.LinearSegmentedColormap</span></tt></a>
+instance denoting the colormap. This must be able to be recognized by
+<a class="reference external" href="http://matplotlib.org/api/cm_api.html#matplotlib.cm.get_cmap">Matplotlib&#8217;s get_cmap function</a>.</li>
+<li><strong>clevs</strong> (<a class="reference external" href="http://docs.python.org/2/library/functions.html#list" title="(in Python v2.7)"><tt class="xref py py-class docutils literal"><span class="pre">list</span></tt></a> of <a class="reference external" href="http://docs.python.org/2/library/functions.html#int" title="(in Python v2.7)"><tt class="xref py py-class docutils literal"><span class="pre">int</span></tt></a> or <a class="reference external" href="http://docs.python.org/2/library/functions.html#float" title="(in Python v2.7)"><tt class="xref py py-class docutils literal"><span class="pre">float</span></tt></a>) &#8211; (Optional) contour levels values.</li>
+<li><strong>nlevs</strong> (<a class="reference external" href="http://docs.python.org/2/library/functions.html#int" title="(in Python v2.7)"><tt class="xref py py-class docutils literal"><span class="pre">int</span></tt></a>) &#8211; (Optional) target number of contour levels if clevs is None.</li>
+<li><strong>parallels</strong> (<a class="reference external" href="http://docs.python.org/2/library/functions.html#list" title="(in Python v2.7)"><tt class="xref py py-class docutils literal"><span class="pre">list</span></tt></a> of <a class="reference external" href="http://docs.python.org/2/library/functions.html#int" title="(in Python v2.7)"><tt class="xref py py-class docutils literal"><span class="pre">int</span></tt></a> or <a class="reference external" href="http://docs.python.org/2/library/functions.html#float" title="(in Python v2.7)"><tt class="xref py py-class docutils literal"><span class="pre">float</span></tt></a>) &#8211; (Optional) list of ints or floats for the parallels to
+be drawn. See the <a class="reference external" href="http://matplotlib.org/basemap/users/graticule.html">Basemap documentation</a>
+for additional information.</li>
+<li><strong>meridians</strong> (<a class="reference external" href="http://docs.python.org/2/library/functions.html#list" title="(in Python v2.7)"><tt class="xref py py-class docutils literal"><span class="pre">list</span></tt></a> of <a class="reference external" href="http://docs.python.org/2/library/functions.html#int" title="(in Python v2.7)"><tt class="xref py py-class docutils literal"><span class="pre">int</span></tt></a> or <a class="reference external" href="http://docs.python.org/2/library/functions.html#float" title="(in Python v2.7)"><tt class="xref py py-class docutils literal"><span class="pre">float</span></tt></a>) &#8211; <p>(Optional) list of ints or floats for the meridians to
+be drawn. See the <a class="reference external" href="http://matplotlib.org/basemap/users/graticule.html">Basemap documentation</a>
+for additional information.</p>
+</li>
+<li><strong>extend</strong> (<a class="reference external" href="http://docs.python.org/2/library/string.html#module-string" title="(in Python v2.7)"><tt class="xref py py-mod docutils literal"><span class="pre">string</span></tt></a>) &#8211; (Optional) flag to toggle whether to place arrows at the colorbar
+boundaries. Default is &#8216;neither&#8217;, but can also be &#8216;min&#8217;, &#8216;max&#8217;, or
+&#8216;both&#8217;. Will be automatically set to &#8216;both&#8217; if clevs is None.</li>
+</ul>
+</td>
+</tr>
+</tbody>
+</table>
+</dd></dl>
+
+<dl class="function">
+<dt id="plotter.draw_histogram">
+<tt class="descclassname">plotter.</tt><tt class="descname">draw_histogram</tt><big>(</big><em>dataset_array</em>, <em>data_names</em>, <em>fname</em>, <em>fmt='png'</em>, <em>nbins=10</em><big>)</big><a class="headerlink" href="#plotter.draw_histogram" title="Permalink to this definition">¶</a></dt>
+<dd><dl class="docutils">
+<dt>Purpose::</dt>
+<dd>Draw histograms</dd>
+<dt>Input::</dt>
+<dd>dataset_array - a list of data values [data1, data2, ....]
+data_names    - a list of data names  [&#8216;name1&#8217;,&#8217;name2&#8217;,....]
+fname  - a string specifying the filename of the plot
+bins - number of bins</dd>
+</dl>
+</dd></dl>
+
+<dl class="function">
+<dt id="plotter.draw_marker_on_map">
+<tt class="descclassname">plotter.</tt><tt class="descname">draw_marker_on_map</tt><big>(</big><em>lat</em>, <em>lon</em>, <em>fname</em>, <em>fmt='png'</em>, <em>location_name=' '</em>, <em>gridshape=(1</em>, <em>1)</em><big>)</big><a class="headerlink" href="#plotter.draw_marker_on_map" title="Permalink to this definition">¶</a></dt>
+<dd><dl class="docutils">
+<dt>Purpose::</dt>
+<dd>Draw a marker on a map</dd>
+<dt>Input::</dt>
+<dd>lat - latitude for plotting a marker
+lon - longitude for plotting a marker
+fname  - a string specifying the filename of the plot</dd>
+</dl>
+</dd></dl>
+
+<dl class="function">
+<dt id="plotter.draw_portrait_diagram">
+<tt class="descclassname">plotter.</tt><tt class="descname">draw_portrait_diagram</tt><big>(</big><em>results</em>, <em>rowlabels</em>, <em>collabels</em>, <em>fname</em>, <em>fmt='png'</em>, <em>gridshape=(1</em>, <em>1)</em>, <em>xlabel=''</em>, <em>ylabel=''</em>, <em>clabel=''</em>, <em>ptitle=''</em>, <em>subtitles=None</em>, <em>cmap=None</em>, <em>clevs=None</em>, <em>nlevs=10</em>, <em>extend='neither'</em>, <em>aspect=None</em><big>)</big><a class="headerlink" href="#plotter.draw_portrait_diagram" title="Permalink to this definition">¶</a></dt>
+<dd><p>Draw a portrait diagram plot.</p>
+<table class="docutils field-list" frame="void" rules="none">
+<col class="field-name" />
+<col class="field-body" />
+<tbody valign="top">
+<tr class="field-odd field"><th class="field-name">Parameters:</th><td class="field-body"><ul class="first last simple">
+<li><strong>results</strong> (<a class="reference external" href="http://docs.scipy.org/doc/numpy/reference/generated/numpy.ndarray.html#numpy.ndarray" title="(in NumPy v1.9)"><tt class="xref py py-class docutils literal"><span class="pre">numpy.ndarray</span></tt></a>) &#8211; 3D array of the fields to be plotted. The second dimension
+should correspond to the number of rows in the diagram and the
+third should correspond to the number of columns.</li>
+<li><strong>rowlabels</strong> (<a class="reference external" href="http://docs.python.org/2/library/functions.html#list" title="(in Python v2.7)"><tt class="xref py py-class docutils literal"><span class="pre">list</span></tt></a> of <a class="reference external" href="http://docs.python.org/2/library/string.html#module-string" title="(in Python v2.7)"><tt class="xref py py-mod docutils literal"><span class="pre">string</span></tt></a>) &#8211; Labels for each row.</li>
+<li><strong>collabels</strong> (<a class="reference external" href="http://docs.python.org/2/library/functions.html#list" title="(in Python v2.7)"><tt class="xref py py-class docutils literal"><span class="pre">list</span></tt></a> of <a class="reference external" href="http://docs.python.org/2/library/string.html#module-string" title="(in Python v2.7)"><tt class="xref py py-mod docutils literal"><span class="pre">string</span></tt></a>) &#8211; Labels for each row.</li>
+<li><strong>fname</strong> (<a class="reference external" href="http://docs.python.org/2/library/string.html#module-string" title="(in Python v2.7)"><tt class="xref py py-mod docutils literal"><span class="pre">string</span></tt></a>) &#8211; Filename of the plot.</li>
+<li><strong>fmt</strong> (<a class="reference external" href="http://docs.python.org/2/library/string.html#module-string" title="(in Python v2.7)"><tt class="xref py py-mod docutils literal"><span class="pre">string</span></tt></a>) &#8211; (Optional) filetype for the output.</li>
+<li><strong>gridshape</strong> (<a class="reference external" href="http://docs.python.org/2/library/functions.html#tuple" title="(in Python v2.7)"><tt class="xref py py-func docutils literal"><span class="pre">tuple()</span></tt></a> of the form (num_rows, num_cols)) &#8211; (Optional) tuple denoting the desired grid shape
+(num_rows, num_cols) for arranging the subplots.</li>
+<li><strong>xlabel</strong> (<a class="reference external" href="http://docs.python.org/2/library/string.html#module-string" title="(in Python v2.7)"><tt class="xref py py-mod docutils literal"><span class="pre">string</span></tt></a>) &#8211; (Optional) x-axis title.</li>
+<li><strong>ylabel</strong> (<a class="reference external" href="http://docs.python.org/2/library/string.html#module-string" title="(in Python v2.7)"><tt class="xref py py-mod docutils literal"><span class="pre">string</span></tt></a>) &#8211; (Optional) y-ayis title.</li>
+<li><strong>clabel</strong> (<a class="reference external" href="http://docs.python.org/2/library/string.html#module-string" title="(in Python v2.7)"><tt class="xref py py-mod docutils literal"><span class="pre">string</span></tt></a>) &#8211; (Optional) colorbar title.</li>
+<li><strong>ptitle</strong> (<a class="reference external" href="http://docs.python.org/2/library/string.html#module-string" title="(in Python v2.7)"><tt class="xref py py-mod docutils literal"><span class="pre">string</span></tt></a>) &#8211; (Optional) plot title.</li>
+<li><strong>subtitles</strong> (<a class="reference external" href="http://docs.python.org/2/library/functions.html#list" title="(in Python v2.7)"><tt class="xref py py-class docutils literal"><span class="pre">list</span></tt></a> of <a class="reference external" href="http://docs.python.org/2/library/string.html#module-string" title="(in Python v2.7)"><tt class="xref py py-mod docutils literal"><span class="pre">string</span></tt></a>) &#8211; (Optional) list of titles for each subplot.</li>
+<li><strong>cmap</strong> (<a class="reference external" href="http://docs.python.org/2/library/string.html#module-string" title="(in Python v2.7)"><tt class="xref py py-mod docutils literal"><span class="pre">string</span></tt></a> or <a class="reference external" href="http://matplotlib.sourceforge.net/api/colors_api.html#matplotlib.colors.LinearSegmentedColormap" title="(in Matplotlib v1.4.3)"><tt class="xref py py-class docutils literal"><span class="pre">matplotlib.colors.LinearSegmentedColormap</span></tt></a>) &#8211; <p>(Optional) string or <a class="reference external" href="http://matplotlib.sourceforge.net/api/colors_api.html#matplotlib.colors.LinearSegmentedColormap" title="(in Matplotlib v1.4.3)"><tt class="xref py py-class docutils literal"><span class="pre">matplotlib.colors.LinearSegmentedColormap</span></tt></a>
+instance denoting the colormap. This must be able to be recognized by
+<a class="reference external" href="http://matplotlib.org/api/cm_api.html#matplotlib.cm.get_cmap">Matplotlib&#8217;s get_cmap function</a>.</p>
+</li>
+<li><strong>clevs</strong> (<a class="reference external" href="http://docs.python.org/2/library/functions.html#list" title="(in Python v2.7)"><tt class="xref py py-class docutils literal"><span class="pre">list</span></tt></a> of <a class="reference external" href="http://docs.python.org/2/library/functions.html#int" title="(in Python v2.7)"><tt class="xref py py-class docutils literal"><span class="pre">int</span></tt></a> or <a class="reference external" href="http://docs.python.org/2/library/functions.html#float" title="(in Python v2.7)"><tt class="xref py py-class docutils literal"><span class="pre">float</span></tt></a>) &#8211; (Optional) contour levels values.</li>
+<li><strong>nlevs</strong> (<a class="reference external" href="http://docs.python.org/2/library/functions.html#int" title="(in Python v2.7)"><tt class="xref py py-class docutils literal"><span class="pre">int</span></tt></a>) &#8211; Optional target number of contour levels if clevs is None.</li>
+<li><strong>extend</strong> (<a class="reference external" href="http://docs.python.org/2/library/string.html#module-string" title="(in Python v2.7)"><tt class="xref py py-mod docutils literal"><span class="pre">string</span></tt></a>) &#8211; (Optional) flag to toggle whether to place arrows at the colorbar
+boundaries. Default is &#8216;neither&#8217;, but can also be &#8216;min&#8217;, &#8216;max&#8217;, or
+&#8216;both&#8217;. Will be automatically set to &#8216;both&#8217; if clevs is None.</li>
+<li><strong>aspect</strong> (<a class="reference external" href="http://docs.python.org/2/library/functions.html#float" title="(in Python v2.7)"><tt class="xref py py-class docutils literal"><span class="pre">float</span></tt></a>) &#8211; (Optional) approximate aspect ratio of each subplot
+(width / height). Default is 8.5 / 5.5</li>
+</ul>
+</td>
+</tr>
+</tbody>
+</table>
+</dd></dl>
+
+<dl class="function">
+<dt id="plotter.draw_subregions">
+<tt class="descclassname">plotter.</tt><tt class="descname">draw_subregions</tt><big>(</big><em>subregions</em>, <em>lats</em>, <em>lons</em>, <em>fname</em>, <em>fmt='png'</em>, <em>ptitle=''</em>, <em>parallels=None</em>, <em>meridians=None</em>, <em>subregion_masks=None</em><big>)</big><a class="headerlink" href="#plotter.draw_subregions" title="Permalink to this definition">¶</a></dt>
+<dd><p>Draw subregion domain(s) on a map.</p>
+<table class="docutils field-list" frame="void" rules="none">
+<col class="field-name" />
+<col class="field-body" />
+<tbody valign="top">
+<tr class="field-odd field"><th class="field-name">Parameters:</th><td class="field-body"><ul class="first last simple">
+<li><strong>subregions</strong> (<a class="reference external" href="http://docs.python.org/2/library/functions.html#list" title="(in Python v2.7)"><tt class="xref py py-class docutils literal"><span class="pre">list</span></tt></a> of subregion objects (Bounds objects)) &#8211; The subregion objects to plot on the map.</li>
+<li><strong>lats</strong> (<a class="reference external" href="http://docs.scipy.org/doc/numpy/reference/generated/numpy.ndarray.html#numpy.ndarray" title="(in NumPy v1.9)"><tt class="xref py py-class docutils literal"><span class="pre">numpy.ndarray</span></tt></a>) &#8211; Array of latitudes values.</li>
+<li><strong>lons</strong> (<a class="reference external" href="http://docs.scipy.org/doc/numpy/reference/generated/numpy.ndarray.html#numpy.ndarray" title="(in NumPy v1.9)"><tt class="xref py py-class docutils literal"><span class="pre">numpy.ndarray</span></tt></a>) &#8211; Array of longitudes values.</li>
+<li><strong>fname</strong> (<a class="reference external" href="http://docs.python.org/2/library/string.html#module-string" title="(in Python v2.7)"><tt class="xref py py-mod docutils literal"><span class="pre">string</span></tt></a>) &#8211; The filename of the plot.</li>
+<li><strong>fmt</strong> (<a class="reference external" href="http://docs.python.org/2/library/string.html#module-string" title="(in Python v2.7)"><tt class="xref py py-mod docutils literal"><span class="pre">string</span></tt></a>) &#8211; (Optional) filetype for the output.</li>
+<li><strong>ptitle</strong> (<a class="reference external" href="http://docs.python.org/2/library/string.html#module-string" title="(in Python v2.7)"><tt class="xref py py-mod docutils literal"><span class="pre">string</span></tt></a>) &#8211; (Optional) plot title.</li>
+<li><strong>parallels</strong> (<a class="reference external" href="http://docs.python.org/2/library/functions.html#list" title="(in Python v2.7)"><tt class="xref py py-class docutils literal"><span class="pre">list</span></tt></a> of <a class="reference external" href="http://docs.python.org/2/library/functions.html#int" title="(in Python v2.7)"><tt class="xref py py-class docutils literal"><span class="pre">int</span></tt></a> or <a class="reference external" href="http://docs.python.org/2/library/functions.html#float" title="(in Python v2.7)"><tt class="xref py py-class docutils literal"><span class="pre">float</span></tt></a>) &#8211; <p>(Optional) <a class="reference external" href="http://docs.python.org/2/library/functions.html#list" title="(in Python v2.7)"><tt class="xref py py-class docutils literal"><span class="pre">list</span></tt></a> of <a class="reference external" href="http://docs.python.org/2/library/functions.html#int" title="(in Python v2.7)"><tt class="xref py 
 py-class docutils literal"><span class="pre">int</span></tt></a> or <a class="reference external" href="http://docs.python.org/2/library/functions.html#float" title="(in Python v2.7)"><tt class="xref py py-class docutils literal"><span class="pre">float</span></tt></a> for the parallels to
+be drawn. See the <a class="reference external" href="http://matplotlib.org/basemap/users/graticule.html">Basemap documentation</a>
+for additional information.</p>
+</li>
+<li><strong>meridians</strong> (<a class="reference external" href="http://docs.python.org/2/library/functions.html#list" title="(in Python v2.7)"><tt class="xref py py-class docutils literal"><span class="pre">list</span></tt></a> of <a class="reference external" href="http://docs.python.org/2/library/functions.html#int" title="(in Python v2.7)"><tt class="xref py py-class docutils literal"><span class="pre">int</span></tt></a> or <a class="reference external" href="http://docs.python.org/2/library/functions.html#float" title="(in Python v2.7)"><tt class="xref py py-class docutils literal"><span class="pre">float</span></tt></a>) &#8211; <p>(Optional) <a class="reference external" href="http://docs.python.org/2/library/functions.html#list" title="(in Python v2.7)"><tt class="xref py py-class docutils literal"><span class="pre">list</span></tt></a> of <a class="reference external" href="http://docs.python.org/2/library/functions.html#int" title="(in Python v2.7)"><tt class="xref py 
 py-class docutils literal"><span class="pre">int</span></tt></a> or <a class="reference external" href="http://docs.python.org/2/library/functions.html#float" title="(in Python v2.7)"><tt class="xref py py-class docutils literal"><span class="pre">float</span></tt></a> for the meridians to
+be drawn. See the <a class="reference external" href="http://matplotlib.org/basemap/users/graticule.html">Basemap documentation</a>
+for additional information.</p>
+</li>
+<li><strong>subregion_masks</strong> (<a class="reference external" href="http://docs.python.org/2/library/stdtypes.html#dict" title="(in Python v2.7)"><tt class="xref py py-class docutils literal"><span class="pre">dict</span></tt></a> of <a class="reference external" href="http://docs.python.org/2/library/functions.html#bool" title="(in Python v2.7)"><tt class="xref py py-class docutils literal"><span class="pre">bool</span></tt></a> arrays) &#8211; (Optional) <a class="reference external" href="http://docs.python.org/2/library/stdtypes.html#dict" title="(in Python v2.7)"><tt class="xref py py-class docutils literal"><span class="pre">dict</span></tt></a> of <a class="reference external" href="http://docs.python.org/2/library/functions.html#bool" title="(in Python v2.7)"><tt class="xref py py-class docutils literal"><span class="pre">bool</span></tt></a> arrays for each
+subregion for giving finer control of the domain to be drawn, by default
+the entire domain is drawn.</li>
+</ul>
+</td>
+</tr>
+</tbody>
+</table>
+</dd></dl>
+
+<dl class="function">
+<dt id="plotter.draw_taylor_diagram">
+<tt class="descclassname">plotter.</tt><tt class="descname">draw_taylor_diagram</tt><big>(</big><em>results</em>, <em>names</em>, <em>refname</em>, <em>fname</em>, <em>fmt='png'</em>, <em>gridshape=(1</em>, <em>1)</em>, <em>ptitle=''</em>, <em>subtitles=None</em>, <em>pos='upper right'</em>, <em>frameon=True</em>, <em>radmax=1.5</em><big>)</big><a class="headerlink" href="#plotter.draw_taylor_diagram" title="Permalink to this definition">¶</a></dt>
+<dd><p>Draw a Taylor diagram.</p>
+<table class="docutils field-list" frame="void" rules="none">
+<col class="field-name" />
+<col class="field-body" />
+<tbody valign="top">
+<tr class="field-odd field"><th class="field-name">Parameters:</th><td class="field-body"><ul class="first last simple">
+<li><strong>results</strong> (<a class="reference external" href="http://docs.scipy.org/doc/numpy/reference/generated/numpy.ndarray.html#numpy.ndarray" title="(in NumPy v1.9)"><tt class="xref py py-class docutils literal"><span class="pre">numpy.ndarray</span></tt></a>) &#8211; An Nx2 array containing normalized standard deviations,
+correlation coefficients, and names of evaluation results.</li>
+<li><strong>names</strong> (<a class="reference external" href="http://docs.python.org/2/library/functions.html#list" title="(in Python v2.7)"><tt class="xref py py-class docutils literal"><span class="pre">list</span></tt></a> of <a class="reference external" href="http://docs.python.org/2/library/string.html#module-string" title="(in Python v2.7)"><tt class="xref py py-mod docutils literal"><span class="pre">string</span></tt></a>) &#8211; A list of names for each evaluated dataset</li>
+<li><strong>refname</strong> (<a class="reference external" href="http://docs.python.org/2/library/string.html#module-string" title="(in Python v2.7)"><tt class="xref py py-mod docutils literal"><span class="pre">string</span></tt></a>) &#8211; The name of the reference dataset.</li>
+<li><strong>fname</strong> (<a class="reference external" href="http://docs.python.org/2/library/string.html#module-string" title="(in Python v2.7)"><tt class="xref py py-mod docutils literal"><span class="pre">string</span></tt></a>) &#8211; The filename of the plot.</li>
+<li><strong>fmt</strong> (<a class="reference external" href="http://docs.python.org/2/library/string.html#module-string" title="(in Python v2.7)"><tt class="xref py py-mod docutils literal"><span class="pre">string</span></tt></a>) &#8211; (Optional) filetype for the output plot.</li>
+<li><strong>gridshape</strong> (A <tt class="xref py py-class docutils literal"><span class="pre">tuple</span></tt> of the form (num_rows, num_cols)) &#8211; (Optional) Tuple denoting the desired grid shape
+(num_rows, num_cols) for arranging the subplots.</li>
+<li><strong>ptitle</strong> (<a class="reference external" href="http://docs.python.org/2/library/string.html#module-string" title="(in Python v2.7)"><tt class="xref py py-mod docutils literal"><span class="pre">string</span></tt></a>) &#8211; (Optional) plot title.</li>
+<li><strong>subtitles</strong> (<a class="reference external" href="http://docs.python.org/2/library/functions.html#list" title="(in Python v2.7)"><tt class="xref py py-class docutils literal"><span class="pre">list</span></tt></a> of <a class="reference external" href="http://docs.python.org/2/library/string.html#module-string" title="(in Python v2.7)"><tt class="xref py py-mod docutils literal"><span class="pre">string</span></tt></a>) &#8211; (Optional) list of strings specifying the title for each
+subplot.</li>
+<li><strong>pos</strong> (<a class="reference external" href="http://docs.python.org/2/library/string.html#module-string" title="(in Python v2.7)"><tt class="xref py py-mod docutils literal"><span class="pre">string</span></tt></a> or <a class="reference external" href="http://docs.python.org/2/library/functions.html#tuple" title="(in Python v2.7)"><tt class="xref py py-func docutils literal"><span class="pre">tuple()</span></tt></a> of <a class="reference external" href="http://docs.python.org/2/library/functions.html#float" title="(in Python v2.7)"><tt class="xref py py-class docutils literal"><span class="pre">float</span></tt></a>) &#8211; (Optional) string or tuple of floats used to set the position
+of the legend. Check the <a class="reference external" href="http://matplotlib.org/api/legend_api.html#matplotlib.legend.Legend">Matplotlib docs</a>
+for additional information.</li>
+<li><strong>frameon</strong> (<a class="reference external" href="http://docs.python.org/2/library/functions.html#bool" title="(in Python v2.7)"><tt class="xref py py-class docutils literal"><span class="pre">bool</span></tt></a>) &#8211; (Optional) boolean specifying whether to draw a frame
+around the legend box.</li>
+<li><strong>radmax</strong> (<a class="reference external" href="http://docs.python.org/2/library/functions.html#float" title="(in Python v2.7)"><tt class="xref py py-class docutils literal"><span class="pre">float</span></tt></a>) &#8211; (Optional) float to adjust the extent of the axes in terms of
+standard deviation.</li>
+</ul>
+</td>
+</tr>
+</tbody>
+</table>
+</dd></dl>
+
+<dl class="function">
+<dt id="plotter.draw_time_series">
+<tt class="descclassname">plotter.</tt><tt class="descname">draw_time_series</tt><big>(</big><em>results</em>, <em>times</em>, <em>labels</em>, <em>fname</em>, <em>fmt='png'</em>, <em>gridshape=(1</em>, <em>1)</em>, <em>xlabel=''</em>, <em>ylabel=''</em>, <em>ptitle=''</em>, <em>subtitles=None</em>, <em>label_month=False</em>, <em>yscale='linear'</em>, <em>aspect=None</em><big>)</big><a class="headerlink" href="#plotter.draw_time_series" title="Permalink to this definition">¶</a></dt>
+<dd><p>Draw a time series plot.</p>
+<table class="docutils field-list" frame="void" rules="none">
+<col class="field-name" />
+<col class="field-body" />
+<tbody valign="top">
+<tr class="field-odd field"><th class="field-name">Parameters:</th><td class="field-body"><ul class="first last simple">
+<li><strong>results</strong> (<a class="reference external" href="http://docs.scipy.org/doc/numpy/reference/generated/numpy.ndarray.html#numpy.ndarray" title="(in NumPy v1.9)"><tt class="xref py py-class docutils literal"><span class="pre">numpy.ndarray</span></tt></a>) &#8211; 3D array of time series data.</li>
+<li><strong>times</strong> (<a class="reference external" href="http://docs.python.org/2/library/functions.html#list" title="(in Python v2.7)"><tt class="xref py py-class docutils literal"><span class="pre">list</span></tt></a> of <a class="reference external" href="http://docs.python.org/2/library/datetime.html#datetime.datetime" title="(in Python v2.7)"><tt class="xref py py-class docutils literal"><span class="pre">datetime.datetime</span></tt></a>) &#8211; List of Python datetime objects used by Matplotlib to handle
+axis formatting.</li>
+<li><strong>labels</strong> (<a class="reference external" href="http://docs.python.org/2/library/functions.html#list" title="(in Python v2.7)"><tt class="xref py py-class docutils literal"><span class="pre">list</span></tt></a> of <a class="reference external" href="http://docs.python.org/2/library/string.html#module-string" title="(in Python v2.7)"><tt class="xref py py-mod docutils literal"><span class="pre">string</span></tt></a>) &#8211; List of names for each data being plotted.</li>
+<li><strong>fname</strong> (<a class="reference external" href="http://docs.python.org/2/library/string.html#module-string" title="(in Python v2.7)"><tt class="xref py py-mod docutils literal"><span class="pre">string</span></tt></a>) &#8211; Filename of the plot.</li>
+<li><strong>fmt</strong> (<a class="reference external" href="http://docs.python.org/2/library/string.html#module-string" title="(in Python v2.7)"><tt class="xref py py-mod docutils literal"><span class="pre">string</span></tt></a>) &#8211; (Optional) filetype for the output.</li>
+<li><strong>gridshape</strong> (<a class="reference external" href="http://docs.python.org/2/library/functions.html#tuple" title="(in Python v2.7)"><tt class="xref py py-func docutils literal"><span class="pre">tuple()</span></tt></a> of the form (num_rows, num_cols)) &#8211; (Optional) tuple denoting the desired grid shape
+(num_rows, num_cols) for arranging the subplots.</li>
+<li><strong>xlabel</strong> (<a class="reference external" href="http://docs.python.org/2/library/string.html#module-string" title="(in Python v2.7)"><tt class="xref py py-mod docutils literal"><span class="pre">string</span></tt></a>) &#8211; (Optional) x-axis title.</li>
+<li><strong>ylabel</strong> (<a class="reference external" href="http://docs.python.org/2/library/string.html#module-string" title="(in Python v2.7)"><tt class="xref py py-mod docutils literal"><span class="pre">string</span></tt></a>) &#8211; (Optional) y-axis title.</li>
+<li><strong>ptitle</strong> (<a class="reference external" href="http://docs.python.org/2/library/string.html#module-string" title="(in Python v2.7)"><tt class="xref py py-mod docutils literal"><span class="pre">string</span></tt></a>) &#8211; (Optional) plot title.</li>
+<li><strong>subtitles</strong> (<a class="reference external" href="http://docs.python.org/2/library/functions.html#list" title="(in Python v2.7)"><tt class="xref py py-class docutils literal"><span class="pre">list</span></tt></a> of <a class="reference external" href="http://docs.python.org/2/library/string.html#module-string" title="(in Python v2.7)"><tt class="xref py py-mod docutils literal"><span class="pre">string</span></tt></a>) &#8211; (Optional) list of titles for each subplot.</li>
+<li><strong>label_month</strong> (<a class="reference external" href="http://docs.python.org/2/library/functions.html#bool" title="(in Python v2.7)"><tt class="xref py py-class docutils literal"><span class="pre">bool</span></tt></a>) &#8211; (Optional) flag to toggle drawing month labels on the
+x-axis.</li>
+<li><strong>yscale</strong> (<a class="reference external" href="http://docs.python.org/2/library/string.html#module-string" title="(in Python v2.7)"><tt class="xref py py-mod docutils literal"><span class="pre">string</span></tt></a>) &#8211; (Optional) y-axis scale value, &#8216;linear&#8217; for linear and &#8216;log&#8217;
+for log base 10.</li>
+<li><strong>aspect</strong> (<a class="reference external" href="http://docs.python.org/2/library/functions.html#float" title="(in Python v2.7)"><tt class="xref py py-class docutils literal"><span class="pre">float</span></tt></a>) &#8211; (Optional) approximate aspect ratio of each subplot
+(width / height). Default is 8.5 / 5.5</li>
+</ul>
+</td>
+</tr>
+</tbody>
+</table>
+</dd></dl>
+
+<dl class="function">
+<dt id="plotter.set_cmap">
+<tt class="descclassname">plotter.</tt><tt class="descname">set_cmap</tt><big>(</big><em>name</em><big>)</big><a class="headerlink" href="#plotter.set_cmap" title="Permalink to this definition">¶</a></dt>
+<dd><p>Sets the default colormap (eg when setting cmap=None in a function)
+See: <a class="reference external" href="http://matplotlib.org/examples/pylab_examples/show_colormaps.html">http://matplotlib.org/examples/pylab_examples/show_colormaps.html</a>
+for a list of possible colormaps.
+Appending &#8216;_r&#8217; to a matplotlib colormap name will give you a reversed
+version of it.</p>
+<table class="docutils field-list" frame="void" rules="none">
+<col class="field-name" />
+<col class="field-body" />
+<tbody valign="top">
+<tr class="field-odd field"><th class="field-name">Parameters:</th><td class="field-body"><strong>name</strong> (<a class="reference external" href="http://docs.python.org/2/library/string.html#module-string" title="(in Python v2.7)"><tt class="xref py py-mod docutils literal"><span class="pre">string</span></tt></a>) &#8211; The name of the colormap.</td>
+</tr>
+</tbody>
+</table>
+</dd></dl>
+
+</div>
+
+
+          </div>
+        </div>
+      </div>
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+        <div class="sphinxsidebarwrapper">
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+                        title="previous chapter">Metrics Module</a></p>
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+                        title="next chapter">Utils Module</a></p>
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Added: climate/site/trunk/content/api/ocw/utils.html
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==============================================================================
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@@ -0,0 +1,392 @@
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+            
+  <div class="section" id="module-utils">
+<span id="utils-module"></span><h1>Utils Module<a class="headerlink" href="#module-utils" title="Permalink to this headline">¶</a></h1>
+<dl class="function">
+<dt id="utils.calc_area_weighted_spatial_average">
+<tt class="descclassname">utils.</tt><tt class="descname">calc_area_weighted_spatial_average</tt><big>(</big><em>dataset</em>, <em>area_weight=False</em><big>)</big><a class="headerlink" href="#utils.calc_area_weighted_spatial_average" title="Permalink to this definition">¶</a></dt>
+<dd><p>Calculate area weighted average of the values in OCW dataset</p>
+<table class="docutils field-list" frame="void" rules="none">
+<col class="field-name" />
+<col class="field-body" />
+<tbody valign="top">
+<tr class="field-odd field"><th class="field-name">Parameters:</th><td class="field-body"><strong>dataset</strong> (<a class="reference internal" href="dataset.html#dataset.Dataset" title="dataset.Dataset"><tt class="xref py py-class docutils literal"><span class="pre">dataset.Dataset</span></tt></a>) &#8211; Dataset object</td>
+</tr>
+<tr class="field-even field"><th class="field-name">Returns:</th><td class="field-body">time series for the dataset of shape (nT)</td>
+</tr>
+</tbody>
+</table>
+</dd></dl>
+
+<dl class="function">
+<dt id="utils.calc_climatology_monthly">
+<tt class="descclassname">utils.</tt><tt class="descname">calc_climatology_monthly</tt><big>(</big><em>dataset</em><big>)</big><a class="headerlink" href="#utils.calc_climatology_monthly" title="Permalink to this definition">¶</a></dt>
+<dd><p>Calculate monthly mean values for a dataset.
+Follow COARDS climo stats calculation, the year can be given as 0 
+but the min year allowed in Python is 1
+<a class="reference external" href="http://www.cgd.ucar.edu/cms/eaton/netcdf/CF-20010629.htm#climatology">http://www.cgd.ucar.edu/cms/eaton/netcdf/CF-20010629.htm#climatology</a></p>
+<table class="docutils field-list" frame="void" rules="none">
+<col class="field-name" />
+<col class="field-body" />
+<tbody valign="top">
+<tr class="field-odd field"><th class="field-name">Parameters:</th><td class="field-body"><strong>dataset</strong> (<a class="reference internal" href="dataset.html#dataset.Dataset" title="dataset.Dataset"><tt class="xref py py-class docutils literal"><span class="pre">dataset.Dataset</span></tt></a>) &#8211; Monthly binned Dataset object with the number of months
+divisible by 12</td>
+</tr>
+<tr class="field-even field"><th class="field-name">Returns:</th><td class="field-body">Mean values for each month of the year of shape (12, num_lats, num_lons)
+and times array of datetime objects of length 12</td>
+</tr>
+<tr class="field-odd field"><th class="field-name" colspan="2">Raises ValueError:</th></tr>
+<tr class="field-odd field"><td>&nbsp;</td><td class="field-body">If the number of monthly bins is not divisible by 12</td>
+</tr>
+</tbody>
+</table>
+</dd></dl>
+
+<dl class="function">
+<dt id="utils.calc_climatology_year">
+<tt class="descclassname">utils.</tt><tt class="descname">calc_climatology_year</tt><big>(</big><em>dataset</em><big>)</big><a class="headerlink" href="#utils.calc_climatology_year" title="Permalink to this definition">¶</a></dt>
+<dd><p>Calculate climatology of dataset&#8217;s values for each year</p>
+<table class="docutils field-list" frame="void" rules="none">
+<col class="field-name" />
+<col class="field-body" />
+<tbody valign="top">
+<tr class="field-odd field"><th class="field-name">Parameters:</th><td class="field-body"><strong>dataset</strong> (<a class="reference internal" href="dataset.html#dataset.Dataset" title="dataset.Dataset"><tt class="xref py py-class docutils literal"><span class="pre">dataset.Dataset</span></tt></a>) &#8211; Monthly binned Dataset object with an evenly divisible
+number of months.</td>
+</tr>
+<tr class="field-even field"><th class="field-name">Returns:</th><td class="field-body">Mean values for each year (annual_mean) and mean values for all
+years (total_mean)</td>
+</tr>
+<tr class="field-odd field"><th class="field-name" colspan="2">Raises ValueError:</th></tr>
+<tr class="field-odd field"><td>&nbsp;</td><td class="field-body">If the number of monthly bins is not evenly divisible
+by 12.</td>
+</tr>
+</tbody>
+</table>
+</dd></dl>
+
+<dl class="function">
+<dt id="utils.calc_subregion_area_mean_and_std">
+<tt class="descclassname">utils.</tt><tt class="descname">calc_subregion_area_mean_and_std</tt><big>(</big><em>dataset_array</em>, <em>subregions</em><big>)</big><a class="headerlink" href="#utils.calc_subregion_area_mean_and_std" title="Permalink to this definition">¶</a></dt>
+<dd><p>Calculate area mean and standard deviation values for a given subregions using datasets on common grid points
+:param dataset_array: An array of OCW Dataset Objects
+:type list:  
+:param subregions: list of subregions
+:type subregions: <tt class="xref py py-class docutils literal"><span class="pre">numpy.ma.array</span></tt>
+:returns: area averaged time series for the dataset of shape (ntime, nsubregion)</p>
+</dd></dl>
+
+<dl class="function">
+<dt id="utils.calc_temporal_mean">
+<tt class="descclassname">utils.</tt><tt class="descname">calc_temporal_mean</tt><big>(</big><em>dataset</em><big>)</big><a class="headerlink" href="#utils.calc_temporal_mean" title="Permalink to this definition">¶</a></dt>
+<dd><p>Calculate temporal mean of dataset&#8217;s values</p>
+<table class="docutils field-list" frame="void" rules="none">
+<col class="field-name" />
+<col class="field-body" />
+<tbody valign="top">
+<tr class="field-odd field"><th class="field-name">Parameters:</th><td class="field-body"><strong>dataset</strong> (<a class="reference internal" href="dataset.html#dataset.Dataset" title="dataset.Dataset"><tt class="xref py py-class docutils literal"><span class="pre">dataset.Dataset</span></tt></a>) &#8211; OCW Dataset whose first dimension is time</td>
+</tr>
+<tr class="field-even field"><th class="field-name">Returns:</th><td class="field-body">Mean values averaged for the first dimension (time)</td>
+</tr>
+</tbody>
+</table>
+</dd></dl>
+
+<dl class="function">
+<dt id="utils.calc_time_series">
+<tt class="descclassname">utils.</tt><tt class="descname">calc_time_series</tt><big>(</big><em>dataset</em><big>)</big><a class="headerlink" href="#utils.calc_time_series" title="Permalink to this definition">¶</a></dt>
+<dd><p>Calculate time series mean values for a dataset</p>
+<table class="docutils field-list" frame="void" rules="none">
+<col class="field-name" />
+<col class="field-body" />
+<tbody valign="top">
+<tr class="field-odd field"><th class="field-name">Parameters:</th><td class="field-body"><strong>dataset</strong> (<a class="reference internal" href="dataset.html#dataset.Dataset" title="dataset.Dataset"><tt class="xref py py-class docutils literal"><span class="pre">dataset.Dataset</span></tt></a>) &#8211; Dataset object</td>
+</tr>
+<tr class="field-even field"><th class="field-name">Returns:</th><td class="field-body">time series for the dataset of shape (nT)</td>
+</tr>
+</tbody>
+</table>
+</dd></dl>
+
+<dl class="function">
+<dt id="utils.decode_time_values">
+<tt class="descclassname">utils.</tt><tt class="descname">decode_time_values</tt><big>(</big><em>dataset</em>, <em>time_var_name</em><big>)</big><a class="headerlink" href="#utils.decode_time_values" title="Permalink to this definition">¶</a></dt>
+<dd><p>Decode NetCDF time values into Python datetime objects.</p>
+<table class="docutils field-list" frame="void" rules="none">
+<col class="field-name" />
+<col class="field-body" />
+<tbody valign="top">
+<tr class="field-odd field"><th class="field-name">Parameters:</th><td class="field-body"><ul class="first simple">
+<li><strong>dataset</strong> (<em>netCDF4.Dataset</em>) &#8211; The dataset from which time values should be extracted.</li>
+<li><strong>time_var_name</strong> (<a class="reference external" href="http://docs.python.org/2/library/string.html#module-string" title="(in Python v2.7)"><tt class="xref py py-mod docutils literal"><span class="pre">string</span></tt></a>) &#8211; The name of the time variable in dataset.</li>
+</ul>
+</td>
+</tr>
+<tr class="field-even field"><th class="field-name">Returns:</th><td class="field-body"><p class="first">The list of converted datetime values.</p>
+</td>
+</tr>
+<tr class="field-odd field"><th class="field-name" colspan="2">Raises ValueError:</th></tr>
+<tr class="field-odd field"><td>&nbsp;</td><td class="field-body"><p class="first last">If the time units value couldn&#8217;t be parsed, if the
+base time value couldn&#8217;t be parsed, or if the time_var_name could not
+be found in the dataset.</p>
+</td>
+</tr>
+</tbody>
+</table>
+</dd></dl>
+
+<dl class="function">
+<dt id="utils.get_temporal_overlap">
+<tt class="descclassname">utils.</tt><tt class="descname">get_temporal_overlap</tt><big>(</big><em>dataset_array</em><big>)</big><a class="headerlink" href="#utils.get_temporal_overlap" title="Permalink to this definition">¶</a></dt>
+<dd><p>Find the maximum temporal overlap across the observation and model datasets</p>
+<table class="docutils field-list" frame="void" rules="none">
+<col class="field-name" />
+<col class="field-body" />
+<tbody valign="top">
+<tr class="field-odd field"><th class="field-name">Parameters:</th><td class="field-body"><strong>dataset_array</strong> &#8211; an array of OCW datasets</td>
+</tr>
+</tbody>
+</table>
+</dd></dl>
+
+<dl class="function">
+<dt id="utils.normalize_lat_lon_values">
+<tt class="descclassname">utils.</tt><tt class="descname">normalize_lat_lon_values</tt><big>(</big><em>lats</em>, <em>lons</em>, <em>values</em><big>)</big><a class="headerlink" href="#utils.normalize_lat_lon_values" title="Permalink to this definition">¶</a></dt>
+<dd><p>Normalize lat/lon values</p>
+<p>Ensure that lat/lon values are within [-180, 180)/[-90, 90) as well
+as sorted. If the values are off the grid they are shifted into the
+expected range.</p>
+<table class="docutils field-list" frame="void" rules="none">
+<col class="field-name" />
+<col class="field-body" />
+<tbody valign="top">
+<tr class="field-odd field"><th class="field-name">Parameters:</th><td class="field-body"><ul class="first simple">
+<li><strong>lats</strong> (<a class="reference external" href="http://docs.scipy.org/doc/numpy/reference/generated/numpy.ndarray.html#numpy.ndarray" title="(in NumPy v1.9)"><tt class="xref py py-class docutils literal"><span class="pre">numpy.ndarray</span></tt></a>) &#8211; A 1D numpy array of sorted lat values.</li>
+<li><strong>lons</strong> (<a class="reference external" href="http://docs.scipy.org/doc/numpy/reference/generated/numpy.ndarray.html#numpy.ndarray" title="(in NumPy v1.9)"><tt class="xref py py-class docutils literal"><span class="pre">numpy.ndarray</span></tt></a>) &#8211; A 1D numpy array of sorted lon values.</li>
+<li><strong>values</strong> &#8211; A 3D array of data values.</li>
+</ul>
+</td>
+</tr>
+<tr class="field-even field"><th class="field-name">Returns:</th><td class="field-body"><p class="first">A <a class="reference external" href="http://docs.python.org/2/library/functions.html#tuple" title="(in Python v2.7)"><tt class="xref py py-func docutils literal"><span class="pre">tuple()</span></tt></a> of the form (adjust_lats, adjusted_lons, adjusted_values)</p>
+</td>
+</tr>
+<tr class="field-odd field"><th class="field-name" colspan="2">Raises ValueError:</th></tr>
+<tr class="field-odd field"><td>&nbsp;</td><td class="field-body"><p class="first last">If the lat/lon values are not sorted.</p>
+</td>
+</tr>
+</tbody>
+</table>
+</dd></dl>
+
+<dl class="function">
+<dt id="utils.parse_base_time_string">
+<tt class="descclassname">utils.</tt><tt class="descname">parse_base_time_string</tt><big>(</big><em>time_format</em><big>)</big><a class="headerlink" href="#utils.parse_base_time_string" title="Permalink to this definition">¶</a></dt>
+<dd><p>Retrieve base time string from time data units information.</p>
+<table class="docutils field-list" frame="void" rules="none">
+<col class="field-name" />
+<col class="field-body" />
+<tbody valign="top">
+<tr class="field-odd field"><th class="field-name">Parameters:</th><td class="field-body"><strong>time_format</strong> (<a class="reference external" href="http://docs.python.org/2/library/string.html#module-string" title="(in Python v2.7)"><tt class="xref py py-mod docutils literal"><span class="pre">string</span></tt></a>) &#8211; The time data units string from the dataset
+being processed. The string should be of the format
+&#8216;&lt;units&gt; since &lt;base time date&gt;&#8217;</td>
+</tr>
+<tr class="field-even field"><th class="field-name">Returns:</th><td class="field-body">The base time string split out of the time units information.</td>
+</tr>
+<tr class="field-odd field"><th class="field-name" colspan="2">Raises ValueError:</th></tr>
+<tr class="field-odd field"><td>&nbsp;</td><td class="field-body">When the time_format parameter is malformed.</td>
+</tr>
+</tbody>
+</table>
+</dd></dl>
+
+<dl class="function">
+<dt id="utils.parse_time_base">
+<tt class="descclassname">utils.</tt><tt class="descname">parse_time_base</tt><big>(</big><em>time_format</em><big>)</big><a class="headerlink" href="#utils.parse_time_base" title="Permalink to this definition">¶</a></dt>
+<dd><p>Parse time base object from the time units string.</p>
+<table class="docutils field-list" frame="void" rules="none">
+<col class="field-name" />
+<col class="field-body" />
+<tbody valign="top">
+<tr class="field-odd field"><th class="field-name">Parameters:</th><td class="field-body"><strong>time_format</strong> (<a class="reference external" href="http://docs.python.org/2/library/string.html#module-string" title="(in Python v2.7)"><tt class="xref py py-mod docutils literal"><span class="pre">string</span></tt></a>) &#8211; The time data units string from the dataset
+being processed. The string should be of the format
+&#8216;&lt;units&gt; since &lt;base time date&gt;&#8217;</td>
+</tr>
+<tr class="field-even field"><th class="field-name">Returns:</th><td class="field-body">The base time as a datetime object.</td>
+</tr>
+<tr class="field-odd field"><th class="field-name" colspan="2">Raises ValueError:</th></tr>
+<tr class="field-odd field"><td>&nbsp;</td><td class="field-body">When the base time string couldn&#8217;t be parsed from the
+units time_format string or if the date string didn&#8217;t match any of the
+expected formats.</td>
+</tr>
+</tbody>
+</table>
+</dd></dl>
+
+<dl class="function">
+<dt id="utils.parse_time_units">
+<tt class="descclassname">utils.</tt><tt class="descname">parse_time_units</tt><big>(</big><em>time_format</em><big>)</big><a class="headerlink" href="#utils.parse_time_units" title="Permalink to this definition">¶</a></dt>
+<dd><p>Parse units value from time units string.</p>
+<dl class="docutils">
+<dt>The only units that are supported are: seconds, minutes, hours, days,</dt>
+<dd>months, or years.</dd>
+</dl>
+<table class="docutils field-list" frame="void" rules="none">
+<col class="field-name" />
+<col class="field-body" />
+<tbody valign="top">
+<tr class="field-odd field"><th class="field-name">Parameters:</th><td class="field-body"><strong>time_format</strong> (<a class="reference external" href="http://docs.python.org/2/library/string.html#module-string" title="(in Python v2.7)"><tt class="xref py py-mod docutils literal"><span class="pre">string</span></tt></a>) &#8211; The time data units string from the dataset
+being processed. The string should be of the format
+&#8216;&lt;units&gt; since &lt;base time date&gt;&#8217;</td>
+</tr>
+<tr class="field-even field"><th class="field-name">Returns:</th><td class="field-body">The unit substring from the time units string</td>
+</tr>
+<tr class="field-odd field"><th class="field-name" colspan="2">Raises ValueError:</th></tr>
+<tr class="field-odd field"><td>&nbsp;</td><td class="field-body">If the units present in the time units string doesn&#8217;t
+match one of the supported unit value.</td>
+</tr>
+</tbody>
+</table>
+</dd></dl>
+
+<dl class="function">
+<dt id="utils.reshape_monthly_to_annually">
+<tt class="descclassname">utils.</tt><tt class="descname">reshape_monthly_to_annually</tt><big>(</big><em>dataset</em><big>)</big><a class="headerlink" href="#utils.reshape_monthly_to_annually" title="Permalink to this definition">¶</a></dt>
+<dd><p>Reshape monthly binned dataset to annual bins.</p>
+<p>Reshape a monthly binned dataset&#8217;s 3D value array with shape
+(num_months, num_lats, num_lons) to a 4D array with shape
+(num_years, 12, num_lats, num_lons). This causes the data to be binned
+annually while retaining its original shape.</p>
+<p>It is assumed that the number of months in the dataset is evenly
+divisible by 12. If it is not you will receive error due to
+an invalid shape.</p>
+<p>Example change of a dataset&#8217;s shape:
+(24, 90, 180) -&gt; (2, 12, 90, 180)</p>
+<table class="docutils field-list" frame="void" rules="none">
+<col class="field-name" />
+<col class="field-body" />
+<tbody valign="top">
+<tr class="field-odd field"><th class="field-name">Parameters:</th><td class="field-body"><strong>dataset</strong> (<a class="reference internal" href="dataset.html#dataset.Dataset" title="dataset.Dataset"><tt class="xref py py-class docutils literal"><span class="pre">dataset.Dataset</span></tt></a>) &#8211; Dataset object with full-year format</td>
+</tr>
+<tr class="field-even field"><th class="field-name">Returns:</th><td class="field-body">Dataset values array with shape (num_year, 12, num_lat, num_lon)</td>
+</tr>
+</tbody>
+</table>
+</dd></dl>
+
+</div>
+
+
+          </div>
+        </div>
+      </div>
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+        <div class="sphinxsidebarwrapper">
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+        <li class="right" >
+          <a href="plotter.html" title="Plotter Module"
+             >previous</a> |</li>
+        <li><a href="../index.html">Apache Open Climate Workbench 1.0.0 documentation</a> &raquo;</li> 
+      </ul>
+    </div>
+    <div class="footer">
+        &copy; Copyright 2013, Apache Software Foundation.
+      Created using <a href="http://sphinx-doc.org/">Sphinx</a> 1.2.1.
+    </div>
+  </body>
+</html>
\ No newline at end of file

Added: climate/site/trunk/content/api/py-modindex.html
URL: http://svn.apache.org/viewvc/climate/site/trunk/content/api/py-modindex.html?rev=1705743&view=auto
==============================================================================
--- climate/site/trunk/content/api/py-modindex.html (added)
+++ climate/site/trunk/content/api/py-modindex.html Mon Sep 28 18:53:09 2015
@@ -0,0 +1,177 @@
+<!DOCTYPE html PUBLIC "-//W3C//DTD XHTML 1.0 Transitional//EN"
+  "http://www.w3.org/TR/xhtml1/DTD/xhtml1-transitional.dtd">
+
+
+<html xmlns="http://www.w3.org/1999/xhtml">
+  <head>
+    <meta http-equiv="Content-Type" content="text/html; charset=utf-8" />
+    
+    <title>Python Module Index &mdash; Apache Open Climate Workbench 1.0.0 documentation</title>
+    
+    <link rel="stylesheet" href="_static/default.css" type="text/css" />
+    <link rel="stylesheet" href="_static/pygments.css" type="text/css" />
+    
+    <script type="text/javascript">
+      var DOCUMENTATION_OPTIONS = {
+        URL_ROOT:    './',
+        VERSION:     '1.0.0',
+        COLLAPSE_INDEX: false,
+        FILE_SUFFIX: '.html',
+        HAS_SOURCE:  true
+      };
+    </script>
+    <script type="text/javascript" src="_static/jquery.js"></script>
+    <script type="text/javascript" src="_static/underscore.js"></script>
+    <script type="text/javascript" src="_static/doctools.js"></script>
+    <link rel="top" title="Apache Open Climate Workbench 1.0.0 documentation" href="index.html" />
+ 
+
+    <script type="text/javascript">
+      DOCUMENTATION_OPTIONS.COLLAPSE_INDEX = true;
+    </script>
+
+
+  </head>
+  <body>
+    <div class="related">
+      <h3>Navigation</h3>
+      <ul>
+        <li class="right" style="margin-right: 10px">
+          <a href="genindex.html" title="General Index"
+             accesskey="I">index</a></li>
+        <li class="right" >
+          <a href="http-routingtable.html" title="HTTP Routing Table"
+             >routing table</a> |</li>
+        <li class="right" >
+          <a href="#" title="Python Module Index"
+             >modules</a> |</li>
+        <li><a href="index.html">Apache Open Climate Workbench 1.0.0 documentation</a> &raquo;</li> 
+      </ul>
+    </div>  
+
+    <div class="document">
+      <div class="documentwrapper">
+        <div class="bodywrapper">
+          <div class="body">
+            
+
+   <h1>Python Module Index</h1>
+
+   <div class="modindex-jumpbox">
+   <a href="#cap-d"><strong>d</strong></a> | 
+   <a href="#cap-e"><strong>e</strong></a> | 
+   <a href="#cap-l"><strong>l</strong></a> | 
+   <a href="#cap-m"><strong>m</strong></a> | 
+   <a href="#cap-p"><strong>p</strong></a> | 
+   <a href="#cap-r"><strong>r</strong></a> | 
+   <a href="#cap-u"><strong>u</strong></a>
+   </div>
+
+   <table class="indextable modindextable" cellspacing="0" cellpadding="2">
+     <tr class="pcap"><td></td><td>&nbsp;</td><td></td></tr>
+     <tr class="cap" id="cap-d"><td></td><td>
+       <strong>d</strong></td><td></td></tr>
+     <tr>
+       <td></td>
+       <td>
+       <a href="data_source/data_sources.html#module-dap"><tt class="xref">dap</tt></a></td><td>
+       <em></em></td></tr>
+     <tr>
+       <td></td>
+       <td>
+       <a href="ocw/dataset_processor.html#module-dataset_processor"><tt class="xref">dataset_processor</tt></a></td><td>
+       <em></em></td></tr>
+     <tr class="pcap"><td></td><td>&nbsp;</td><td></td></tr>
+     <tr class="cap" id="cap-e"><td></td><td>
+       <strong>e</strong></td><td></td></tr>
+     <tr>
+       <td></td>
+       <td>
+       <a href="data_source/data_sources.html#module-esgf"><tt class="xref">esgf</tt></a></td><td>
+       <em></em></td></tr>
+     <tr class="pcap"><td></td><td>&nbsp;</td><td></td></tr>
+     <tr class="cap" id="cap-l"><td></td><td>
+       <strong>l</strong></td><td></td></tr>
+     <tr>
+       <td></td>
+       <td>
+       <a href="data_source/data_sources.html#module-local"><tt class="xref">local</tt></a></td><td>
+       <em></em></td></tr>
+     <tr class="pcap"><td></td><td>&nbsp;</td><td></td></tr>
+     <tr class="cap" id="cap-m"><td></td><td>
+       <strong>m</strong></td><td></td></tr>
+     <tr>
+       <td></td>
+       <td>
+       <a href="ocw/metrics.html#module-metrics"><tt class="xref">metrics</tt></a></td><td>
+       <em></em></td></tr>
+     <tr class="pcap"><td></td><td>&nbsp;</td><td></td></tr>
+     <tr class="cap" id="cap-p"><td></td><td>
+       <strong>p</strong></td><td></td></tr>
+     <tr>
+       <td></td>
+       <td>
+       <a href="ocw/plotter.html#module-plotter"><tt class="xref">plotter</tt></a></td><td>
+       <em></em></td></tr>
+     <tr class="pcap"><td></td><td>&nbsp;</td><td></td></tr>
+     <tr class="cap" id="cap-r"><td></td><td>
+       <strong>r</strong></td><td></td></tr>
+     <tr>
+       <td></td>
+       <td>
+       <a href="data_source/data_sources.html#module-rcmed"><tt class="xref">rcmed</tt></a></td><td>
+       <em></em></td></tr>
+     <tr class="pcap"><td></td><td>&nbsp;</td><td></td></tr>
+     <tr class="cap" id="cap-u"><td></td><td>
+       <strong>u</strong></td><td></td></tr>
+     <tr>
+       <td></td>
+       <td>
+       <a href="ocw/utils.html#module-utils"><tt class="xref">utils</tt></a></td><td>
+       <em></em></td></tr>
+   </table>
+
+
+          </div>
+        </div>
+      </div>
+      <div class="sphinxsidebar">
+        <div class="sphinxsidebarwrapper">
+<div id="searchbox" style="display: none">
+  <h3>Quick search</h3>
+    <form class="search" action="search.html" method="get">
+      <input type="text" name="q" />
+      <input type="submit" value="Go" />
+      <input type="hidden" name="check_keywords" value="yes" />
+      <input type="hidden" name="area" value="default" />
+    </form>
+    <p class="searchtip" style="font-size: 90%">
+    Enter search terms or a module, class or function name.
+    </p>
+</div>
+<script type="text/javascript">$('#searchbox').show(0);</script>
+        </div>
+      </div>
+      <div class="clearer"></div>
+    </div>
+    <div class="related">
+      <h3>Navigation</h3>
+      <ul>
+        <li class="right" style="margin-right: 10px">
+          <a href="genindex.html" title="General Index"
+             >index</a></li>
+        <li class="right" >
+          <a href="http-routingtable.html" title="HTTP Routing Table"
+             >routing table</a> |</li>
+        <li class="right" >
+          <a href="#" title="Python Module Index"
+             >modules</a> |</li>
+        <li><a href="index.html">Apache Open Climate Workbench 1.0.0 documentation</a> &raquo;</li> 
+      </ul>
+    </div>
+    <div class="footer">
+        &copy; Copyright 2013, Apache Software Foundation.
+      Created using <a href="http://sphinx-doc.org/">Sphinx</a> 1.2.1.
+    </div>
+  </body>
+</html>
\ No newline at end of file

Added: climate/site/trunk/content/api/search.html
URL: http://svn.apache.org/viewvc/climate/site/trunk/content/api/search.html?rev=1705743&view=auto
==============================================================================
--- climate/site/trunk/content/api/search.html (added)
+++ climate/site/trunk/content/api/search.html Mon Sep 28 18:53:09 2015
@@ -0,0 +1,111 @@
+<!DOCTYPE html PUBLIC "-//W3C//DTD XHTML 1.0 Transitional//EN"
+  "http://www.w3.org/TR/xhtml1/DTD/xhtml1-transitional.dtd">
+
+
+<html xmlns="http://www.w3.org/1999/xhtml">
+  <head>
+    <meta http-equiv="Content-Type" content="text/html; charset=utf-8" />
+    
+    <title>Search &mdash; Apache Open Climate Workbench 1.0.0 documentation</title>
+    
+    <link rel="stylesheet" href="_static/default.css" type="text/css" />
+    <link rel="stylesheet" href="_static/pygments.css" type="text/css" />
+    
+    <script type="text/javascript">
+      var DOCUMENTATION_OPTIONS = {
+        URL_ROOT:    './',
+        VERSION:     '1.0.0',
+        COLLAPSE_INDEX: false,
+        FILE_SUFFIX: '.html',
+        HAS_SOURCE:  true
+      };
+    </script>
+    <script type="text/javascript" src="_static/jquery.js"></script>
+    <script type="text/javascript" src="_static/underscore.js"></script>
+    <script type="text/javascript" src="_static/doctools.js"></script>
+    <script type="text/javascript" src="_static/searchtools.js"></script>
+    <link rel="top" title="Apache Open Climate Workbench 1.0.0 documentation" href="index.html" />
+  <script type="text/javascript">
+    jQuery(function() { Search.loadIndex("searchindex.js"); });
+  </script>
+  
+  <script type="text/javascript" id="searchindexloader"></script>
+   
+
+  </head>
+  <body>
+    <div class="related">
+      <h3>Navigation</h3>
+      <ul>
+        <li class="right" style="margin-right: 10px">
+          <a href="genindex.html" title="General Index"
+             accesskey="I">index</a></li>
+        <li class="right" >
+          <a href="http-routingtable.html" title="HTTP Routing Table"
+             >routing table</a> |</li>
+        <li class="right" >
+          <a href="py-modindex.html" title="Python Module Index"
+             >modules</a> |</li>
+        <li><a href="index.html">Apache Open Climate Workbench 1.0.0 documentation</a> &raquo;</li> 
+      </ul>
+    </div>  
+
+    <div class="document">
+      <div class="documentwrapper">
+        <div class="bodywrapper">
+          <div class="body">
+            
+  <h1 id="search-documentation">Search</h1>
+  <div id="fallback" class="admonition warning">
+  <script type="text/javascript">$('#fallback').hide();</script>
+  <p>
+    Please activate JavaScript to enable the search
+    functionality.
+  </p>
+  </div>
+  <p>
+    From here you can search these documents. Enter your search
+    words into the box below and click "search". Note that the search
+    function will automatically search for all of the words. Pages
+    containing fewer words won't appear in the result list.
+  </p>
+  <form action="" method="get">
+    <input type="text" name="q" value="" />
+    <input type="submit" value="search" />
+    <span id="search-progress" style="padding-left: 10px"></span>
+  </form>
+  
+  <div id="search-results">
+  
+  </div>
+
+          </div>
+        </div>
+      </div>
+      <div class="sphinxsidebar">
+        <div class="sphinxsidebarwrapper">
+        </div>
+      </div>
+      <div class="clearer"></div>
+    </div>
+    <div class="related">
+      <h3>Navigation</h3>
+      <ul>
+        <li class="right" style="margin-right: 10px">
+          <a href="genindex.html" title="General Index"
+             >index</a></li>
+        <li class="right" >
+          <a href="http-routingtable.html" title="HTTP Routing Table"
+             >routing table</a> |</li>
+        <li class="right" >
+          <a href="py-modindex.html" title="Python Module Index"
+             >modules</a> |</li>
+        <li><a href="index.html">Apache Open Climate Workbench 1.0.0 documentation</a> &raquo;</li> 
+      </ul>
+    </div>
+    <div class="footer">
+        &copy; Copyright 2013, Apache Software Foundation.
+      Created using <a href="http://sphinx-doc.org/">Sphinx</a> 1.2.1.
+    </div>
+  </body>
+</html>
\ No newline at end of file



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