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From "Philip Thompson (JIRA)" <j...@apache.org>
Subject [jira] [Created] (CASSANDRA-11765) dtest failure in upgrade_tests.upgrade_through_versions_test.ProtoV3Upgrade_AllVersions_Skips_3_0_x_EndsAt_Trunk_HEAD.rolling_upgrade_test
Date Thu, 12 May 2016 15:08:13 GMT
Philip Thompson created CASSANDRA-11765:
-------------------------------------------

             Summary: dtest failure in upgrade_tests.upgrade_through_versions_test.ProtoV3Upgrade_AllVersions_Skips_3_0_x_EndsAt_Trunk_HEAD.rolling_upgrade_test
                 Key: CASSANDRA-11765
                 URL: https://issues.apache.org/jira/browse/CASSANDRA-11765
             Project: Cassandra
          Issue Type: Bug
            Reporter: Philip Thompson
         Attachments: node1.log, node1_debug.log, node2.log, node2_debug.log, node3.log, node3_debug.log

Example failure:

http://cassci.datastax.com/view/Parameterized/job/upgrade_tests-all-custom_branch_runs/12/testReport/upgrade_tests.upgrade_through_versions_test/ProtoV3Upgrade_AllVersions_Skips_3_0_x_EndsAt_Trunk_HEAD/rolling_upgrade_test_2/

The test is seeing a corrupt hint sstable after upgrade from 2.2.5 to 3.6. Relevant stack
trace is

{code}
ERROR [main] 2016-05-11 16:22:25,180 CassandraDaemon.java:727 - Exception encountered during
startup
java.lang.RuntimeException: java.util.concurrent.ExecutionException: org.apache.cassandra.io.sstable.CorruptSSTableException:
Corrupted: /mnt/tmp/dtest-X7IReF/test/node1/data2/system/hints-2666e20573ef38b390fefecf96e8f0c7/la-3-big-Data.db
	at org.apache.cassandra.hints.LegacyHintsMigrator.forceCompaction(LegacyHintsMigrator.java:119)
~[main/:na]
	at org.apache.cassandra.hints.LegacyHintsMigrator.compactLegacyHints(LegacyHintsMigrator.java:108)
~[main/:na]
	at org.apache.cassandra.hints.LegacyHintsMigrator.migrate(LegacyHintsMigrator.java:92) ~[main/:na]
	at org.apache.cassandra.service.CassandraDaemon.setup(CassandraDaemon.java:321) [main/:na]
	at org.apache.cassandra.service.CassandraDaemon.activate(CassandraDaemon.java:581) [main/:na]
	at org.apache.cassandra.service.CassandraDaemon.main(CassandraDaemon.java:710) [main/:na]
Caused by: java.util.concurrent.ExecutionException: org.apache.cassandra.io.sstable.CorruptSSTableException:
Corrupted: /mnt/tmp/dtest-X7IReF/test/node1/data2/system/hints-2666e20573ef38b390fefecf96e8f0c7/la-3-big-Data.db
	at java.util.concurrent.FutureTask.report(FutureTask.java:122) ~[na:1.8.0_51]
	at java.util.concurrent.FutureTask.get(FutureTask.java:192) ~[na:1.8.0_51]
	at org.apache.cassandra.hints.LegacyHintsMigrator.forceCompaction(LegacyHintsMigrator.java:115)
~[main/:na]
	... 5 common frames omitted
Caused by: org.apache.cassandra.io.sstable.CorruptSSTableException: Corrupted: /mnt/tmp/dtest-X7IReF/test/node1/data2/system/hints-2666e20573ef38b390fefecf96e8f0c7/la-3-big-Data.db
	at org.apache.cassandra.io.sstable.format.big.BigTableScanner$KeyScanningIterator.computeNext(BigTableScanner.java:351)
~[main/:na]
	at org.apache.cassandra.io.sstable.format.big.BigTableScanner$KeyScanningIterator.computeNext(BigTableScanner.java:265)
~[main/:na]
	at org.apache.cassandra.utils.AbstractIterator.hasNext(AbstractIterator.java:47) ~[main/:na]
	at org.apache.cassandra.io.sstable.format.big.BigTableScanner.hasNext(BigTableScanner.java:245)
~[main/:na]
	at org.apache.cassandra.utils.MergeIterator$OneToOne.computeNext(MergeIterator.java:463)
~[main/:na]
	at org.apache.cassandra.utils.AbstractIterator.hasNext(AbstractIterator.java:47) ~[main/:na]
	at org.apache.cassandra.db.partitions.UnfilteredPartitionIterators$2.hasNext(UnfilteredPartitionIterators.java:150)
~[main/:na]
	at org.apache.cassandra.db.transform.BasePartitions.hasNext(BasePartitions.java:72) ~[main/:na]
	at org.apache.cassandra.db.compaction.CompactionIterator.hasNext(CompactionIterator.java:226)
~[main/:na]
	at org.apache.cassandra.db.compaction.CompactionTask.runMayThrow(CompactionTask.java:182)
~[main/:na]
	at org.apache.cassandra.utils.WrappedRunnable.run(WrappedRunnable.java:28) ~[main/:na]
	at org.apache.cassandra.db.compaction.CompactionTask.executeInternal(CompactionTask.java:82)
~[main/:na]
	at org.apache.cassandra.db.compaction.AbstractCompactionTask.execute(AbstractCompactionTask.java:60)
~[main/:na]
	at org.apache.cassandra.db.compaction.CompactionManager$10.runMayThrow(CompactionManager.java:805)
~[main/:na]
	at org.apache.cassandra.utils.WrappedRunnable.run(WrappedRunnable.java:28) ~[main/:na]
	at java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:511) ~[na:1.8.0_51]
	at java.util.concurrent.FutureTask.run(FutureTask.java:266) ~[na:1.8.0_51]
	at java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1142) ~[na:1.8.0_51]
	at java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:617) ~[na:1.8.0_51]
	at java.lang.Thread.run(Thread.java:745) ~[na:1.8.0_51]
Caused by: java.io.EOFException: null
	at org.apache.cassandra.io.util.RebufferingInputStream.readFully(RebufferingInputStream.java:68)
~[main/:na]
	at org.apache.cassandra.io.util.RebufferingInputStream.readFully(RebufferingInputStream.java:60)
~[main/:na]
	at org.apache.cassandra.io.util.TrackedDataInputPlus.readFully(TrackedDataInputPlus.java:93)
~[main/:na]
	at org.apache.cassandra.utils.ByteBufferUtil.read(ByteBufferUtil.java:400) ~[main/:na]
	at org.apache.cassandra.utils.ByteBufferUtil.readWithShortLength(ByteBufferUtil.java:375)
~[main/:na]
	at org.apache.cassandra.db.Serializers$1.deserialize(Serializers.java:109) ~[main/:na]
	at org.apache.cassandra.db.Serializers$1.deserialize(Serializers.java:89) ~[main/:na]
	at org.apache.cassandra.io.sstable.IndexInfo$Serializer.deserialize(IndexInfo.java:135) ~[main/:na]
	at org.apache.cassandra.db.RowIndexEntry$IndexedEntry.<init>(RowIndexEntry.java:651)
~[main/:na]
	at org.apache.cassandra.db.RowIndexEntry$IndexedEntry.<init>(RowIndexEntry.java:577)
~[main/:na]
	at org.apache.cassandra.db.RowIndexEntry$LegacyShallowIndexedEntry.deserialize(RowIndexEntry.java:508)
~[main/:na]
	at org.apache.cassandra.db.RowIndexEntry$Serializer.deserialize(RowIndexEntry.java:321) ~[main/:na]
	at org.apache.cassandra.io.sstable.format.big.BigTableScanner$KeyScanningIterator.computeNext(BigTableScanner.java:310)
~[main/:na]
	... 19 common frames omitted
ERROR [CompactionExecutor:2] 2016-05-11 16:22:25,183 CassandraDaemon.java:213 - Exception
in thread Thread[CompactionExecutor:2,1,main]
org.apache.cassandra.io.sstable.CorruptSSTableException: Corrupted: /mnt/tmp/dtest-X7IReF/test/node1/data2/system/hints-2666e20573ef38b390fefecf96e8f0c7/la-3-big-Data.db
	at org.apache.cassandra.io.sstable.format.big.BigTableScanner$KeyScanningIterator.computeNext(BigTableScanner.java:351)
~[main/:na]
	at org.apache.cassandra.io.sstable.format.big.BigTableScanner$KeyScanningIterator.computeNext(BigTableScanner.java:265)
~[main/:na]
	at org.apache.cassandra.utils.AbstractIterator.hasNext(AbstractIterator.java:47) ~[main/:na]
	at org.apache.cassandra.io.sstable.format.big.BigTableScanner.hasNext(BigTableScanner.java:245)
~[main/:na]
	at org.apache.cassandra.utils.MergeIterator$OneToOne.computeNext(MergeIterator.java:463)
~[main/:na]
	at org.apache.cassandra.utils.AbstractIterator.hasNext(AbstractIterator.java:47) ~[main/:na]
	at org.apache.cassandra.db.partitions.UnfilteredPartitionIterators$2.hasNext(UnfilteredPartitionIterators.java:150)
~[main/:na]
	at org.apache.cassandra.db.transform.BasePartitions.hasNext(BasePartitions.java:72) ~[main/:na]
	at org.apache.cassandra.db.compaction.CompactionIterator.hasNext(CompactionIterator.java:226)
~[main/:na]
	at org.apache.cassandra.db.compaction.CompactionTask.runMayThrow(CompactionTask.java:182)
~[main/:na]
	at org.apache.cassandra.utils.WrappedRunnable.run(WrappedRunnable.java:28) ~[main/:na]
	at org.apache.cassandra.db.compaction.CompactionTask.executeInternal(CompactionTask.java:82)
~[main/:na]
	at org.apache.cassandra.db.compaction.AbstractCompactionTask.execute(AbstractCompactionTask.java:60)
~[main/:na]
	at org.apache.cassandra.db.compaction.CompactionManager$10.runMayThrow(CompactionManager.java:805)
~[main/:na]
	at org.apache.cassandra.utils.WrappedRunnable.run(WrappedRunnable.java:28) ~[main/:na]
	at java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:511) ~[na:1.8.0_51]
	at java.util.concurrent.FutureTask.run(FutureTask.java:266) ~[na:1.8.0_51]
	at java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1142) ~[na:1.8.0_51]
	at java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:617) [na:1.8.0_51]
	at java.lang.Thread.run(Thread.java:745) [na:1.8.0_51]
Caused by: java.io.EOFException: null
	at org.apache.cassandra.io.util.RebufferingInputStream.readFully(RebufferingInputStream.java:68)
~[main/:na]
	at org.apache.cassandra.io.util.RebufferingInputStream.readFully(RebufferingInputStream.java:60)
~[main/:na]
	at org.apache.cassandra.io.util.TrackedDataInputPlus.readFully(TrackedDataInputPlus.java:93)
~[main/:na]
	at org.apache.cassandra.utils.ByteBufferUtil.read(ByteBufferUtil.java:400) ~[main/:na]
	at org.apache.cassandra.utils.ByteBufferUtil.readWithShortLength(ByteBufferUtil.java:375)
~[main/:na]
	at org.apache.cassandra.db.Serializers$1.deserialize(Serializers.java:109) ~[main/:na]
	at org.apache.cassandra.db.Serializers$1.deserialize(Serializers.java:89) ~[main/:na]
	at org.apache.cassandra.io.sstable.IndexInfo$Serializer.deserialize(IndexInfo.java:135) ~[main/:na]
	at org.apache.cassandra.db.RowIndexEntry$IndexedEntry.<init>(RowIndexEntry.java:651)
~[main/:na]
	at org.apache.cassandra.db.RowIndexEntry$IndexedEntry.<init>(RowIndexEntry.java:577)
~[main/:na]
	at org.apache.cassandra.db.RowIndexEntry$LegacyShallowIndexedEntry.deserialize(RowIndexEntry.java:508)
~[main/:na]
	at org.apache.cassandra.db.RowIndexEntry$Serializer.deserialize(RowIndexEntry.java:321) ~[main/:na]
	at org.apache.cassandra.io.sstable.format.big.BigTableScanner$KeyScanningIterator.computeNext(BigTableScanner.java:310)
~[main/:na]
	... 19 common frames omitted
{code}

Logs are attached



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