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From "Liang Chen (JIRA)" <j...@apache.org>
Subject [jira] [Updated] (CARBONDATA-98) Met an exception when convert a large scale csv : Failed to generate global dictionary files
Date Wed, 09 Nov 2016 22:33:59 GMT

     [ https://issues.apache.org/jira/browse/CARBONDATA-98?page=com.atlassian.jira.plugin.system.issuetabpanels:all-tabpanel
]

Liang Chen updated CARBONDATA-98:
---------------------------------
    Fix Version/s:     (was: 0.2.0-incubating)
                   0.3.0-incubating

> Met an exception when convert a large scale csv : Failed to generate global dictionary
files
> --------------------------------------------------------------------------------------------
>
>                 Key: CARBONDATA-98
>                 URL: https://issues.apache.org/jira/browse/CARBONDATA-98
>             Project: CarbonData
>          Issue Type: Bug
>          Components: spark-integration
>    Affects Versions: 0.1.0-incubating
>         Environment: 8 machines with 64cores and 128G memory. 
>            Reporter: William Zen
>
> Hi, guys
> Recently I try to set up an adhoc query engine with CarbonData following this link:http://www.jianshu.com/p/99e4893065d7.
> I try to convert csv file into Carbon file, unfortunately the spark cluster throw an
exception when I convert a csv with 300 million rows :
> Failed to generate global dictionary files
> However, when I reduce my data file to 30 million rows, everything is OK. Below is my
command, any ideas?
> ./bin/spark-shell --master yarn-client --jars ./carbondata/*.jar ./lib/datanucleus*.jar
 --num-executors 27 --executor-cores 12 --executor-memory 30G
> some related logs may help, I've replace the columns' name with xxxxx
> INFO  22-07 23:45:03,789 - Finished task 5.1 in stage 2.0 (TID 849) in 92511 ms on sparkcluster-30-10.gtj
(52/53)
> INFO  22-07 23:47:40,082 - Finished task 13.1 in stage 2.0 (TID 848) in 250538 ms on
sparkcluster-30-10.gtj (53/53)
> INFO  22-07 23:47:40,082 - ResultStage 2 (collect at GlobalDictionaryUtil.scala:483)
finished in 951.679 s
> INFO  22-07 23:47:40,082 - Removed TaskSet 2.0, whose tasks have all completed, from
pool 
> INFO  22-07 23:47:40,083 - Job 1 finished: collect at GlobalDictionaryUtil.scala:483,
took 1146.830091 s
> ERROR 22-07 23:47:40,087 - table:carbondata_large_test column:xxxxx generate global dictionary
file failed
> ERROR 22-07 23:47:40,087 - table:carbondata_large_test column:xxxxx generate global dictionary
file failed
> ERROR 22-07 23:47:40,087 - table:carbondata_large_test column:xxxxx generate global dictionary
file failed
> ERROR 22-07 23:47:40,087 - table:carbondata_large_test column:xxxxx generate global dictionary
file failed
> ERROR 22-07 23:47:40,087 - table:carbondata_large_test column:xxxxx generate global dictionary
file failed
> ERROR 22-07 23:47:40,087 - table:carbondata_large_test column:xxxxx generate global dictionary
file failed
> ERROR 22-07 23:47:40,087 - table:carbondata_large_test column:xxxxx generate global dictionary
file failed
> ERROR 22-07 23:47:40,087 - table:carbondata_large_test column:xxxxx generate global dictionary
file failed
> ERROR 22-07 23:47:40,087 - table:carbondata_large_test column:xxxxx generate global dictionary
file failed
> ERROR 22-07 23:47:40,087 - table:carbondata_large_test column:xxxxx generate global dictionary
file failed
> ERROR 22-07 23:47:40,087 - table:carbondata_large_test column:xxxxx generate global dictionary
file failed
> ERROR 22-07 23:47:40,087 - table:carbondata_large_test column:xxxxx generate global dictionary
file failed
> ERROR 22-07 23:47:40,087 - table:carbondata_large_test column:xxxxx generate global dictionary
file failed
> ERROR 22-07 23:47:40,087 - table:carbondata_large_test column:xxxxx generate global dictionary
file failed
> ERROR 22-07 23:47:40,087 - table:carbondata_large_test column:xxxxx generate global dictionary
file failed
> ERROR 22-07 23:47:40,087 - table:carbondata_large_test column:xxxxx generate global dictionary
file failed
> ERROR 22-07 23:47:40,087 - table:carbondata_large_test column:xxxxx generate global dictionary
file failed
> ERROR 22-07 23:47:40,087 - table:carbondata_large_test column:xxxxx generate global dictionary
file failed
> ERROR 22-07 23:47:40,088 - table:carbondata_large_test column:xxxxx generate global dictionary
file failed
> ERROR 22-07 23:47:40,088 - table:carbondata_large_test column:xxxxx generate global dictionary
file failed
> ERROR 22-07 23:47:40,088 - table:carbondata_large_test column:xxxxx generate global dictionary
file failed
> ERROR 22-07 23:47:40,088 - table:carbondata_large_test column:xxxxx generate global dictionary
file failed
> ERROR 22-07 23:47:40,088 - table:carbondata_large_test column:xxxxx generate global dictionary
file failed
> ERROR 22-07 23:47:40,088 - table:carbondata_large_test column:xxxxx generate global dictionary
file failed
> ERROR 22-07 23:47:40,088 - table:carbondata_large_test column:xxxxx generate global dictionary
file failed
> ERROR 22-07 23:47:40,088 - table:carbondata_large_test column:xxxxx generate global dictionary
file failed
> ERROR 22-07 23:47:40,088 - table:carbondata_large_test column:xxxxx generate global dictionary
file failed
> ERROR 22-07 23:47:40,088 - table:carbondata_large_test column:xxxxx generate global dictionary
file failed
> ERROR 22-07 23:47:40,088 - table:carbondata_large_test column:xxxxx generate global dictionary
file failed
> ERROR 22-07 23:47:40,088 - table:carbondata_large_test column:xxxxx generate global dictionary
file failed
> ERROR 22-07 23:47:40,088 - table:carbondata_large_test column:xxxxx generate global dictionary
file failed
> ERROR 22-07 23:47:40,088 - generate global dictionary files failed
> ERROR 22-07 23:47:40,089 - generate global dictionary failed
> ERROR 22-07 23:47:40,089 - main 
> java.lang.Exception: Failed to generate global dictionary files
>         at org.carbondata.spark.util.GlobalDictionaryUtil$.org$carbondata$spark$util$GlobalDictionaryUtil$$checkStatus(GlobalDictionaryUtil.scala:441)
>         at org.carbondata.spark.util.GlobalDictionaryUtil$.generateGlobalDictionary(GlobalDictionaryUtil.scala:485)
>         at org.apache.spark.sql.execution.command.LoadTable.run(carbonTableSchema.scala:1144)
>         at org.apache.spark.sql.execution.ExecutedCommand.sideEffectResult$lzycompute(commands.scala:58)
>         at org.apache.spark.sql.execution.ExecutedCommand.sideEffectResult(commands.scala:56)
>         at org.apache.spark.sql.execution.ExecutedCommand.doExecute(commands.scala:70)
>         at org.apache.spark.sql.execution.SparkPlan$$anonfun$execute$5.apply(SparkPlan.scala:132)
>         at org.apache.spark.sql.execution.SparkPlan$$anonfun$execute$5.apply(SparkPlan.scala:130)
>         at org.apache.spark.rdd.RDDOperationScope$.withScope(RDDOperationScope.scala:150)
>         at org.apache.spark.sql.execution.SparkPlan.execute(SparkPlan.scala:130)
>         at org.apache.spark.sql.execution.QueryExecution.toRdd$lzycompute(QueryExecution.scala:55)
>         at org.apache.spark.sql.execution.QueryExecution.toRdd(QueryExecution.scala:55)
>         at org.apache.spark.sql.DataFrame.<init>(DataFrame.scala:145)
>         at org.apache.spark.sql.DataFrame.<init>(DataFrame.scala:130)
>         at org.carbondata.spark.rdd.CarbonDataFrameRDD.<init>(CarbonDataFrameRDD.scala:23)
>         at org.apache.spark.sql.CarbonContext.sql(CarbonContext.scala:109)
>         at $line27.$read$$iwC$$iwC$$iwC$$iwC$$iwC$$iwC$$iwC$$iwC.<init>(<console>:35)
>         at $line27.$read$$iwC$$iwC$$iwC$$iwC$$iwC$$iwC$$iwC.<init>(<console>:40)
>         at $line27.$read$$iwC$$iwC$$iwC$$iwC$$iwC$$iwC.<init>(<console>:42)
>         at $line27.$read$$iwC$$iwC$$iwC$$iwC$$iwC.<init>(<console>:44)
>         at $line27.$read$$iwC$$iwC$$iwC$$iwC.<init>(<console>:46)
>         at $line27.$read$$iwC$$iwC$$iwC.<init>(<console>:48)
>         at $line27.$read$$iwC$$iwC.<init>(<console>:50)
>         at $line27.$read$$iwC.<init>(<console>:52)
>         at $line27.$read.<init>(<console>:54)
>         at $line27.$read$.<init>(<console>:58)
>         at $line27.$read$.<clinit>(<console>)
>         at $line27.$eval$.<init>(<console>:7)
>         at $line27.$eval$.<clinit>(<console>)
>         at $line27.$eval.$print(<console>)
>         at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
>         at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:57)
>         at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
>         at java.lang.reflect.Method.invoke(Method.java:606)
>         at org.apache.spark.repl.SparkIMain$ReadEvalPrint.call(SparkIMain.scala:1065)
>         at org.apache.spark.repl.SparkIMain$Request.loadAndRun(SparkIMain.scala:1346)
>         at org.apache.spark.repl.SparkIMain.loadAndRunReq$1(SparkIMain.scala:840)
>         at org.apache.spark.repl.SparkIMain.interpret(SparkIMain.scala:871)
>         at org.apache.spark.repl.SparkIMain.interpret(SparkIMain.scala:819)
>         at org.apache.spark.repl.SparkILoop.reallyInterpret$1(SparkILoop.scala:857)
>         at org.apache.spark.repl.SparkILoop.interpretStartingWith(SparkILoop.scala:902)
>         at org.apache.spark.repl.SparkILoop.command(SparkILoop.scala:814)
>         at org.apache.spark.repl.SparkILoop.processLine$1(SparkILoop.scala:657)
>         at org.apache.spark.repl.SparkILoop.innerLoop$1(SparkILoop.scala:665)
>         at org.apache.spark.repl.SparkILoop.org$apache$spark$repl$SparkILoop$$loop(SparkILoop.scala:670)
>         at org.apache.spark.repl.SparkILoop$$anonfun$org$apache$spark$repl$SparkILoop$$process$1.apply$mcZ$sp(SparkILoop.scala:997)
>         at org.apache.spark.repl.SparkILoop$$anonfun$org$apache$spark$repl$SparkILoop$$process$1.apply(SparkILoop.scala:945)
>         at org.apache.spark.repl.SparkILoop$$anonfun$org$apache$spark$repl$SparkILoop$$process$1.apply(SparkILoop.scala:945)
>         at scala.tools.nsc.util.ScalaClassLoader$.savingContextLoader(ScalaClassLoader.scala:135)
>         at org.apache.spark.repl.SparkILoop.org$apache$spark$repl$SparkILoop$$process(SparkILoop.scala:945)
>         at org.apache.spark.repl.SparkILoop.process(SparkILoop.scala:1059)
>         at org.apache.spark.repl.Main$.main(Main.scala:31)
>         at org.apache.spark.repl.Main.main(Main.scala)
>         at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
>         at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:57)
>         at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
>         at java.lang.reflect.Method.invoke(Method.java:606)
>         at org.apache.spark.deploy.SparkSubmit$.org$apache$spark$deploy$SparkSubmit$$runMain(SparkSubmit.scala:731)
>         at org.apache.spark.deploy.SparkSubmit$.doRunMain$1(SparkSubmit.scala:181)
>         at org.apache.spark.deploy.SparkSubmit$.submit(SparkSubmit.scala:206)
>         at org.apache.spark.deploy.SparkSubmit$.main(SparkSubmit.scala:121)
>         at org.apache.spark.deploy.SparkSubmit.main(SparkSubmit.scala)
> AUDIT 22-07 23:47:40,092 - [sparkcluster-30-1.gtj][root][Thread-1]Dataload failure for
default.carbondata_large_test. Please check the logs
> INFO  22-07 23:47:40,098 - Table MetaData Unlocked Successfully after data load
> java.lang.Exception: Failed to generate global dictionary files
>         at org.carbondata.spark.util.GlobalDictionaryUtil$.org$carbondata$spark$util$GlobalDictionaryUtil$$checkStatus(GlobalDictionaryUtil.scala:441)
>         at org.carbondata.spark.util.GlobalDictionaryUtil$.generateGlobalDictionary(GlobalDictionaryUtil.scala:485)
>         at org.apache.spark.sql.execution.command.LoadTable.run(carbonTableSchema.scala:1144)
>         at org.apache.spark.sql.execution.ExecutedCommand.sideEffectResult$lzycompute(commands.scala:58)
>         at org.apache.spark.sql.execution.ExecutedCommand.sideEffectResult(commands.scala:56)
>         at org.apache.spark.sql.execution.ExecutedCommand.doExecute(commands.scala:70)
>         at org.apache.spark.sql.execution.SparkPlan$$anonfun$execute$5.apply(SparkPlan.scala:132)
>         at org.apache.spark.sql.execution.SparkPlan$$anonfun$execute$5.apply(SparkPlan.scala:130)
>         at org.apache.spark.rdd.RDDOperationScope$.withScope(RDDOperationScope.scala:150)
>         at org.apache.spark.sql.execution.SparkPlan.execute(SparkPlan.scala:130)
>         at org.apache.spark.sql.execution.QueryExecution.toRdd$lzycompute(QueryExecution.scala:55)
>         at org.apache.spark.sql.execution.QueryExecution.toRdd(QueryExecution.scala:55)
>         at org.apache.spark.sql.DataFrame.<init>(DataFrame.scala:145)
>         at org.apache.spark.sql.DataFrame.<init>(DataFrame.scala:130)
>         at org.carbondata.spark.rdd.CarbonDataFrameRDD.<init>(CarbonDataFrameRDD.scala:23)
>         at org.apache.spark.sql.CarbonContext.sql(CarbonContext.scala:109)
>         at $iwC$$iwC$$iwC$$iwC$$iwC$$iwC$$iwC$$iwC.<init>(<console>:35)
>         at $iwC$$iwC$$iwC$$iwC$$iwC$$iwC$$iwC.<init>(<console>:40)
>         at $iwC$$iwC$$iwC$$iwC$$iwC$$iwC.<init>(<console>:42)
>         at $iwC$$iwC$$iwC$$iwC$$iwC.<init>(<console>:44)
>         at $iwC$$iwC$$iwC$$iwC.<init>(<console>:46)
>         at $iwC$$iwC$$iwC.<init>(<console>:48)
>         at $iwC$$iwC.<init>(<console>:50)
>         at $iwC.<init>(<console>:52)
>         at <init>(<console>:54)
>         at .<init>(<console>:58)
>         at .<clinit>(<console>)
>         at .<init>(<console>:7)
>         at .<clinit>(<console>)
>         at $print(<console>)
>         at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
>         at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:57)
>         at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
>         at java.lang.reflect.Method.invoke(Method.java:606)
>         at org.apache.spark.repl.SparkIMain$ReadEvalPrint.call(SparkIMain.scala:1065)
>         at org.apache.spark.repl.SparkIMain$Request.loadAndRun(SparkIMain.scala:1346)
>         at org.apache.spark.repl.SparkIMain.loadAndRunReq$1(SparkIMain.scala:840)
>         at org.apache.spark.repl.SparkIMain.interpret(SparkIMain.scala:871)
>         at org.apache.spark.repl.SparkIMain.interpret(SparkIMain.scala:819)
>         at org.apache.spark.repl.SparkILoop.reallyInterpret$1(SparkILoop.scala:857)
>         at org.apache.spark.repl.SparkILoop.interpretStartingWith(SparkILoop.scala:902)
>         at org.apache.spark.repl.SparkILoop.command(SparkILoop.scala:814)
>         at org.apache.spark.repl.SparkILoop.processLine$1(SparkILoop.scala:657)
>         at org.apache.spark.repl.SparkILoop.innerLoop$1(SparkILoop.scala:665)
>         at org.apache.spark.repl.SparkILoop.org$apache$spark$repl$SparkILoop$$loop(SparkILoop.scala:670)
>         at org.apache.spark.repl.SparkILoop$$anonfun$org$apache$spark$repl$SparkILoop$$process$1.apply$mcZ$sp(SparkILoop.scala:997)
>         at org.apache.spark.repl.SparkILoop$$anonfun$org$apache$spark$repl$SparkILoop$$process$1.apply(SparkILoop.scala:945)
>         at org.apache.spark.repl.SparkILoop$$anonfun$org$apache$spark$repl$SparkILoop$$process$1.apply(SparkILoop.scala:945)
>         at scala.tools.nsc.util.ScalaClassLoader$.savingContextLoader(ScalaClassLoader.scala:135)
>         at org.apache.spark.repl.SparkILoop.org$apache$spark$repl$SparkILoop$$process(SparkILoop.scala:945)
>         at org.apache.spark.repl.SparkILoop.process(SparkILoop.scala:1059)
>         at org.apache.spark.repl.Main$.main(Main.scala:31)
>         at org.apache.spark.repl.Main.main(Main.scala)
>         at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
>         at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:57)
>         at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
>         at java.lang.reflect.Method.invoke(Method.java:606)
>         at org.apache.spark.deploy.SparkSubmit$.org$apache$spark$deploy$SparkSubmit$$runMain(SparkSubmit.scala:731)
>         at org.apache.spark.deploy.SparkSubmit$.doRunMain$1(SparkSubmit.scala:181)
>         at org.apache.spark.deploy.SparkSubmit$.submit(SparkSubmit.scala:206)
>         at org.apache.spark.deploy.SparkSubmit$.main(SparkSubmit.scala:121)
>         at org.apache.spark.deploy.SparkSubmit.main(SparkSubmit.scala)



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