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From Mike Kaplinskiy <m...@ladderlife.com>
Subject Spark storageLevel not taking effect
Date Thu, 11 Oct 2018 20:05:02 GMT
Hey folks,

Admittedly I may be a bit on the bleeding edge here, but I'm attempting to
run a Beam pipeline on Spark which is running on top of Kubernetes.
Specifically Beam 2.6.0 with Spark 2.4.0-rc2 running in client mode with a
Kubernetes (1.11) driver. It's actually pretty cool - from a Kubernetes
perspective, I start a pod which starts a ton of workers to do the parallel
stuff and then cleans up after itself.

One thing I can't seem to get working is setting the storage level for
Spark RDDs via Beam. Specifically passing --storageLevel=MEMORY_AND_DISK
seems to not work - the rdd still shows up as "Memory Deserialized 1x
Replicated" in the Spark UI. I would expect it to be something closer to
"Disk Memory Deserialized 1x Replicated." It *seems* to be serialized only
in the sense that less memory is used (I assume it gets encoded).

I even tried hardcoding storageLevel in BoundedDataset.java (based on the
line number in the DAG viz). Unfortunately it still shows up as memory-only.

Am I missing something that would let me spill data to disk?

For reference, here's my exact command line:
/opt/spark/bin/spark-submit
--master 'k8s://https://kubernetes:443'
--deploy-mode client
--name $(MY_POD_NAME)
--conf spark.executor.instances=20
--conf spark.driver.host=$(MY_POD_IP)
--conf spark.driver.port=7077
--conf spark.kubernetes.container.image=$(MY_IMAGE)
--conf spark.kubernetes.driver.pod.name=$(MY_POD_NAME)
--conf spark.kubernetes.executor.podNamePrefix=$(MY_POD_NAME)
--conf spark.executor.memory=5500m
--conf spark.executor.memoryOverhead=1300m
--conf spark.memory.fraction=0.45
--conf spark.executor.cores=3
--conf spark.kubernetes.executor.limit.cores=3
--conf spark.default.parallelism=60
--conf spark.kubernetes.allocation.batch.size=20
--conf spark.kubernetes.driver.label.app=beam-datomic-smoketest
--conf spark.kubernetes.node.selector.node.ladderlife.com/group=etl
--conf spark.kubernetes.executor.annotation.iam.amazonaws.com/role=etl-role
--conf spark.kubernetes.executor.secrets.google-cloud=/google-cloud-secrets
--conf spark.kubernetes.executor.secretKeyRef.SENTRY_DSN=sentry-secrets:dsn
--conf spark.executorEnv.STATSD_HOST=169.254.168.253
--class ladder.my_beam_job
local:///srv/beam_job.jar
--runner=SparkRunner
--storageLevel=MEMORY_AND_DISK

Thanks,
Mike.

Ladder <http://bit.ly/1VRtWfS>. The smart, modern way to insure your life.

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