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From Apache Jenkins Server <jenk...@builds.apache.org>
Subject Build failed in Jenkins: beam_PerformanceTests_Python #856
Date Wed, 31 Jan 2018 06:01:17 GMT
See <https://builds.apache.org/job/beam_PerformanceTests_Python/856/display/redirect?page=changes>

Changes:

[kedin] [SQL] Refactor Variance

[kedin] [Nexmark][SQL] Implement sql query 3

[tgroh] Add CoderTranslatorRegistrar

[chamikara] Updates PTransform overriding to create a new AppliedPTransform object

------------------------------------------
Started by timer
[EnvInject] - Loading node environment variables.
Building remotely on beam4 (beam) in workspace <https://builds.apache.org/job/beam_PerformanceTests_Python/ws/>
 > git rev-parse --is-inside-work-tree # timeout=10
Fetching changes from the remote Git repository
 > git config remote.origin.url https://github.com/apache/beam.git # timeout=10
Fetching upstream changes from https://github.com/apache/beam.git
 > git --version # timeout=10
 > git fetch --tags --progress https://github.com/apache/beam.git +refs/heads/*:refs/remotes/origin/*
+refs/pull/${ghprbPullId}/*:refs/remotes/origin/pr/${ghprbPullId}/*
 > git rev-parse origin/master^{commit} # timeout=10
Checking out Revision 645e1b51e1c83ec4b0b54a774d6615624f3c42ed (origin/master)
 > git config core.sparsecheckout # timeout=10
 > git checkout -f 645e1b51e1c83ec4b0b54a774d6615624f3c42ed
Commit message: "Merge pull request #4448: [SQL] Refactor Variance"
 > git rev-list 34d8bc9079a5a4b3d3a5476b2d4b48072be0dff4 # timeout=10
Cleaning workspace
 > git rev-parse --verify HEAD # timeout=10
Resetting working tree
 > git reset --hard # timeout=10
 > git clean -fdx # timeout=10
[EnvInject] - Executing scripts and injecting environment variables after the SCM step.
[EnvInject] - Injecting as environment variables the properties content 
SPARK_LOCAL_IP=127.0.0.1

[EnvInject] - Variables injected successfully.
[beam_PerformanceTests_Python] $ /bin/bash -xe /tmp/jenkins5499283578059472838.sh
+ rm -rf PerfKitBenchmarker
[beam_PerformanceTests_Python] $ /bin/bash -xe /tmp/jenkins527850684334946878.sh
+ rm -rf .env
[beam_PerformanceTests_Python] $ /bin/bash -xe /tmp/jenkins1097187561501222493.sh
+ virtualenv .env --system-site-packages
New python executable in .env/bin/python
Installing setuptools, pip...done.
[beam_PerformanceTests_Python] $ /bin/bash -xe /tmp/jenkins7306039795591851249.sh
+ git clone https://github.com/GoogleCloudPlatform/PerfKitBenchmarker.git
Cloning into 'PerfKitBenchmarker'...
[beam_PerformanceTests_Python] $ /bin/bash -xe /tmp/jenkins2310814785634687574.sh
+ .env/bin/pip install -r PerfKitBenchmarker/requirements.txt
Requirement already satisfied (use --upgrade to upgrade): absl-py in /home/jenkins/.local/lib/python2.7/site-packages
(from -r PerfKitBenchmarker/requirements.txt (line 14))
Requirement already satisfied (use --upgrade to upgrade): jinja2>=2.7 in /usr/local/lib/python2.7/dist-packages
(from -r PerfKitBenchmarker/requirements.txt (line 15))
Requirement already satisfied (use --upgrade to upgrade): setuptools in ./.env/lib/python2.7/site-packages
(from -r PerfKitBenchmarker/requirements.txt (line 16))
Requirement already satisfied (use --upgrade to upgrade): colorlog[windows]==2.6.0 in /home/jenkins/.local/lib/python2.7/site-packages
(from -r PerfKitBenchmarker/requirements.txt (line 17))
  Installing extra requirements: 'windows'
Requirement already satisfied (use --upgrade to upgrade): blinker>=1.3 in /home/jenkins/.local/lib/python2.7/site-packages
(from -r PerfKitBenchmarker/requirements.txt (line 18))
Requirement already satisfied (use --upgrade to upgrade): futures>=3.0.3 in /home/jenkins/.local/lib/python2.7/site-packages
(from -r PerfKitBenchmarker/requirements.txt (line 19))
Requirement already satisfied (use --upgrade to upgrade): PyYAML==3.12 in /home/jenkins/.local/lib/python2.7/site-packages
(from -r PerfKitBenchmarker/requirements.txt (line 20))
Requirement already satisfied (use --upgrade to upgrade): pint>=0.7 in /home/jenkins/.local/lib/python2.7/site-packages
(from -r PerfKitBenchmarker/requirements.txt (line 21))
Requirement already satisfied (use --upgrade to upgrade): numpy in /home/jenkins/.local/lib/python2.7/site-packages
(from -r PerfKitBenchmarker/requirements.txt (line 22))
Requirement already satisfied (use --upgrade to upgrade): functools32 in /home/jenkins/.local/lib/python2.7/site-packages
(from -r PerfKitBenchmarker/requirements.txt (line 23))
Requirement already satisfied (use --upgrade to upgrade): contextlib2>=0.5.1 in /home/jenkins/.local/lib/python2.7/site-packages
(from -r PerfKitBenchmarker/requirements.txt (line 24))
Requirement already satisfied (use --upgrade to upgrade): pywinrm in /home/jenkins/.local/lib/python2.7/site-packages
(from -r PerfKitBenchmarker/requirements.txt (line 25))
Cleaning up...
[beam_PerformanceTests_Python] $ /bin/bash -xe /tmp/jenkins3740887293761302288.sh
+ .env/bin/pip install -e 'src/sdks/python/[gcp,test]'
Obtaining file://<https://builds.apache.org/job/beam_PerformanceTests_Python/ws/src/sdks/python>
  Running setup.py (path:<https://builds.apache.org/job/beam_PerformanceTests_Python/ws/src/sdks/python/setup.py)>
egg_info for package from file://<https://builds.apache.org/job/beam_PerformanceTests_Python/ws/src/sdks/python>
    <https://builds.apache.org/job/beam_PerformanceTests_Python/ws/src/sdks/python/setup.py>:66:
UserWarning: You are using version 1.5.4 of pip. However, version 7.0.0 is recommended.
      _PIP_VERSION, REQUIRED_PIP_VERSION
    no previously-included directories found matching 'doc/.build'
    
    Installed <https://builds.apache.org/job/beam_PerformanceTests_Python/ws/src/sdks/python/nose-1.3.7-py2.7.egg>
    /usr/lib/python2.7/distutils/dist.py:267: UserWarning: Unknown distribution option: 'python_requires'
      warnings.warn(msg)
    
    warning: no files found matching 'README.md'
    warning: no files found matching 'NOTICE'
    warning: no files found matching 'LICENSE'
  Installing extra requirements: 'gcp,test'
Requirement already satisfied (use --upgrade to upgrade): avro>=1.8.1,<2.0.0 in /home/jenkins/.local/lib/python2.7/site-packages
(from apache-beam==2.4.0.dev)
Requirement already satisfied (use --upgrade to upgrade): crcmod>=1.7,<2.0 in /usr/lib/python2.7/dist-packages
(from apache-beam==2.4.0.dev)
Requirement already satisfied (use --upgrade to upgrade): dill==0.2.6 in /home/jenkins/.local/lib/python2.7/site-packages
(from apache-beam==2.4.0.dev)
Requirement already satisfied (use --upgrade to upgrade): grpcio>=1.0,<2 in /home/jenkins/.local/lib/python2.7/site-packages
(from apache-beam==2.4.0.dev)
Requirement already satisfied (use --upgrade to upgrade): httplib2>=0.8,<0.10 in /home/jenkins/.local/lib/python2.7/site-packages
(from apache-beam==2.4.0.dev)
Requirement already satisfied (use --upgrade to upgrade): mock>=1.0.1,<3.0.0 in /home/jenkins/.local/lib/python2.7/site-packages
(from apache-beam==2.4.0.dev)
Requirement already satisfied (use --upgrade to upgrade): oauth2client>=2.0.1,<5 in
/home/jenkins/.local/lib/python2.7/site-packages (from apache-beam==2.4.0.dev)
Requirement already satisfied (use --upgrade to upgrade): protobuf>=3.5.0.post1,<4 in
/home/jenkins/.local/lib/python2.7/site-packages (from apache-beam==2.4.0.dev)
Requirement already satisfied (use --upgrade to upgrade): pyyaml>=3.12,<4.0.0 in /home/jenkins/.local/lib/python2.7/site-packages
(from apache-beam==2.4.0.dev)
Requirement already satisfied (use --upgrade to upgrade): pyvcf>=0.6.8,<0.7.0 in /home/jenkins/.local/lib/python2.7/site-packages
(from apache-beam==2.4.0.dev)
Requirement already satisfied (use --upgrade to upgrade): six>=1.9,<1.12 in /home/jenkins/.local/lib/python2.7/site-packages
(from apache-beam==2.4.0.dev)
Requirement already satisfied (use --upgrade to upgrade): typing>=3.6.0,<3.7.0 in /home/jenkins/.local/lib/python2.7/site-packages
(from apache-beam==2.4.0.dev)
Requirement already satisfied (use --upgrade to upgrade): futures>=3.1.1,<4.0.0 in /home/jenkins/.local/lib/python2.7/site-packages
(from apache-beam==2.4.0.dev)
Requirement already satisfied (use --upgrade to upgrade): hdfs3>=0.3.0,<0.4.0 in /home/jenkins/.local/lib/python2.7/site-packages
(from apache-beam==2.4.0.dev)
Requirement already satisfied (use --upgrade to upgrade): pyhamcrest>=1.9,<2.0 in /home/jenkins/.local/lib/python2.7/site-packages
(from apache-beam==2.4.0.dev)
Requirement already satisfied (use --upgrade to upgrade): google-apitools>=0.5.18,<=0.5.20
in /home/jenkins/.local/lib/python2.7/site-packages (from apache-beam==2.4.0.dev)
Requirement already satisfied (use --upgrade to upgrade): proto-google-cloud-datastore-v1>=0.90.0,<=0.90.4
in /home/jenkins/.local/lib/python2.7/site-packages (from apache-beam==2.4.0.dev)
Requirement already satisfied (use --upgrade to upgrade): googledatastore==7.0.1 in /home/jenkins/.local/lib/python2.7/site-packages
(from apache-beam==2.4.0.dev)
Requirement already satisfied (use --upgrade to upgrade): google-cloud-pubsub==0.26.0 in /home/jenkins/.local/lib/python2.7/site-packages
(from apache-beam==2.4.0.dev)
Requirement already satisfied (use --upgrade to upgrade): google-cloud-bigquery==0.25.0 in
/home/jenkins/.local/lib/python2.7/site-packages (from apache-beam==2.4.0.dev)
Requirement already satisfied (use --upgrade to upgrade): enum34>=1.0.4 in /home/jenkins/.local/lib/python2.7/site-packages
(from grpcio>=1.0,<2->apache-beam==2.4.0.dev)
Requirement already satisfied (use --upgrade to upgrade): pyasn1>=0.1.7 in /home/jenkins/.local/lib/python2.7/site-packages
(from oauth2client>=2.0.1,<5->apache-beam==2.4.0.dev)
Requirement already satisfied (use --upgrade to upgrade): pyasn1-modules>=0.0.5 in /home/jenkins/.local/lib/python2.7/site-packages
(from oauth2client>=2.0.1,<5->apache-beam==2.4.0.dev)
Requirement already satisfied (use --upgrade to upgrade): rsa>=3.1.4 in /home/jenkins/.local/lib/python2.7/site-packages
(from oauth2client>=2.0.1,<5->apache-beam==2.4.0.dev)
Requirement already satisfied (use --upgrade to upgrade): googleapis-common-protos>=1.5.2,<2.0dev
in /home/jenkins/.local/lib/python2.7/site-packages (from proto-google-cloud-datastore-v1>=0.90.0,<=0.90.4->apache-beam==2.4.0.dev)
Installing collected packages: apache-beam
  Running setup.py develop for apache-beam
    <https://builds.apache.org/job/beam_PerformanceTests_Python/ws/src/sdks/python/setup.py>:66:
UserWarning: You are using version 1.5.4 of pip. However, version 7.0.0 is recommended.
      _PIP_VERSION, REQUIRED_PIP_VERSION
    /usr/lib/python2.7/distutils/dist.py:267: UserWarning: Unknown distribution option: 'python_requires'
      warnings.warn(msg)
    
    warning: no files found matching 'README.md'
    warning: no files found matching 'NOTICE'
    warning: no files found matching 'LICENSE'
    Creating <https://builds.apache.org/job/beam_PerformanceTests_Python/ws/.env/lib/python2.7/site-packages/apache-beam.egg-link>
(link to .)
    Adding apache-beam 2.4.0.dev to easy-install.pth file
    
    Installed <https://builds.apache.org/job/beam_PerformanceTests_Python/ws/src/sdks/python>
Successfully installed apache-beam
Cleaning up...
[beam_PerformanceTests_Python] $ /bin/bash -xe /tmp/jenkins8026123637253369796.sh
+ .env/bin/python PerfKitBenchmarker/pkb.py --project=apache-beam-testing --dpb_log_level=INFO
--maven_binary=/home/jenkins/tools/maven/latest/bin/mvn --bigquery_table=beam_performance.pkb_results
--official=true --beam_sdk=python --benchmarks=beam_integration_benchmark --beam_it_args=--project=apache-beam-testing,--staging_location=gs://temp-storage-for-end-to-end-tests/staging-it,--temp_location=gs://temp-storage-for-end-to-end-tests/temp-it,--output=gs://temp-storage-for-end-to-end-tests/py-it-cloud/output
Traceback (most recent call last):
  File "PerfKitBenchmarker/pkb.py", line 21, in <module>
    sys.exit(Main())
  File "<https://builds.apache.org/job/beam_PerformanceTests_Python/ws/PerfKitBenchmarker/perfkitbenchmarker/pkb.py",>
line 869, in Main
    SetUpPKB()
  File "<https://builds.apache.org/job/beam_PerformanceTests_Python/ws/PerfKitBenchmarker/perfkitbenchmarker/pkb.py",>
line 740, in SetUpPKB
    vm_util.GenTempDir()
  File "<https://builds.apache.org/job/beam_PerformanceTests_Python/ws/PerfKitBenchmarker/perfkitbenchmarker/vm_util.py",>
line 121, in GenTempDir
    temp_dir.CreateTemporaryDirectories()
  File "<https://builds.apache.org/job/beam_PerformanceTests_Python/ws/PerfKitBenchmarker/perfkitbenchmarker/temp_dir.py",>
line 62, in CreateTemporaryDirectories
    os.makedirs(path)
  File "<https://builds.apache.org/job/beam_PerformanceTests_Python/ws/.env/lib/python2.7/os.py",>
line 157, in makedirs
    mkdir(name, mode)
OSError: [Errno 13] Permission denied: '/tmp/perfkitbenchmarker/runs/a3c5fcb2'
Build step 'Execute shell' marked build as failure
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