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From "Mikhail Lesyk (JIRA)" <j...@apache.org>
Subject [jira] [Updated] (AURORA-1902) Docker containers with not newest OS fails to run
Date Wed, 08 Mar 2017 20:02:38 GMT

     [ https://issues.apache.org/jira/browse/AURORA-1902?page=com.atlassian.jira.plugin.system.issuetabpanels:all-tabpanel
]

Mikhail Lesyk updated AURORA-1902:
----------------------------------
    Description: 
When trying to launch Docker containers, got an error:
{code}
I0308 21:47:18.769095  3579 fetcher.cpp:498] Fetcher Info: {"cache_directory":"\/tmp\/mesos\/fetch\/slaves\/7cbc133f-24ac-4937-aa28-09e8c81b647b-S6","items":[{"action":"BYPASS_CACHE","uri":{"executable":true,"extract":true,"value":"\/usr\/share\/aurora\/bin\/thermos_executor.pex"}}],"sandbox_directory":"\/var\/lib\/mesos\/slaves\/7cbc133f-24ac-4937-aa28-09e8c81b647b-S6\/frameworks\/47934424-623f-4fcb-9326-bf668149fc77-0000\/executors\/thermos-root-prod-test-0-cfb60c44-5153-4c92-b03a-393ba7de40b2\/runs\/bb3269f4-54e3-4509-98b5-8125a3cdeb14"}
I0308 21:47:18.774142  3579 fetcher.cpp:409] Fetching URI '/usr/share/aurora/bin/thermos_executor.pex'
I0308 21:47:18.774230  3579 fetcher.cpp:250] Fetching directly into the sandbox directory
I0308 21:47:18.774284  3579 fetcher.cpp:187] Fetching URI '/usr/share/aurora/bin/thermos_executor.pex'
I0308 21:47:18.774340  3579 fetcher.cpp:167] Copying resource with command:cp '/usr/share/aurora/bin/thermos_executor.pex'
'/var/lib/mesos/slaves/7cbc133f-24ac-4937-aa28-09e8c81b647b-S6/frameworks/47934424-623f-4fcb-9326-bf668149fc77-0000/executors/thermos-root-prod-test-0-cfb60c44-5153-4c92-b03a-393ba7de40b2/runs/bb3269f4-54e3-4509-98b5-8125a3cdeb14/thermos_executor.pex'
I0308 21:47:18.804293  3579 fetcher.cpp:547] Fetched '/usr/share/aurora/bin/thermos_executor.pex'
to '/var/lib/mesos/slaves/7cbc133f-24ac-4937-aa28-09e8c81b647b-S6/frameworks/47934424-623f-4fcb-9326-bf668149fc77-0000/executors/thermos-root-prod-test-0-cfb60c44-5153-4c92-b03a-393ba7de40b2/runs/bb3269f4-54e3-4509-98b5-8125a3cdeb14/thermos_executor.pex'
WARNING: Your kernel does not support swap limit capabilities or the cgroup is not mounted.
Memory limited without swap.
Traceback (most recent call last):
  File "apache/aurora/executor/bin/thermos_executor_main.py", line 45, in <module>
    from mesos.executor import MesosExecutorDriver
  File "/root/.pex/install/mesos.executor-1.1.0-py2.7-linux-x86_64.egg.47fa022c99c11c7faddf379cbfc46a25c5f215be/mesos.executor-1.1.0-py2.7-linux-x86_64.egg/mesos/executor/__init__.py",
line 17, in <module>
    from ._executor import MesosExecutorDriverImpl as MesosExecutorDriver
ImportError: /usr/lib/x86_64-linux-gnu/libstdc++.so.6: version `GLIBCXX_3.4.20' not found
(required by /root/.pex/install/mesos.executor-1.1.0-py2.7-linux-x86_64.egg.47fa022c99c11c7faddf379cbfc46a25c5f215be/mesos.executor-1.1.0-py2.7-linux-x86_64.egg/mesos/executor/_executor.so)

twitter.common.app debug: Initializing: twitter.common.log (Logging subsystem.)
Writing log files to disk in /mnt/mesos/sandbox
thermos_executor.pex: error: Could not load MesosExecutorDriver!
twitter.common.app debug: main sys.exited
twitter.common.app debug: Shutting application down.
twitter.common.app debug: Running exit function for twitter.common.log (Logging subsystem.)
twitter.common.app debug: Finishing up module teardown.
twitter.common.app debug:   Active thread: <_MainThread(MainThread, started 140671274604352)>
twitter.common.app debug: Exiting cleanly.
{code}
Tested affected systems(with absent of GLIBCXX_3.4.20):
Debian 8
Ubuntu 14.04

How to reproduce:
1) Prepare Docker image with Python 2.7. Example of Dockerfile:
{code}
FROM ubuntu:14.04

RUN apt-get -y update && apt-get -y install python2.7
{code}
2) build and push image to some repo, example:
{code}
docker build -t mlesyk/ubuntu:14.04 . && docker push mlesyk/ubuntu:14.04
{code}

  was:
When trying to launch Docker containers, got an error:
{code}
I0308 21:47:18.769095  3579 fetcher.cpp:498] Fetcher Info: {"cache_directory":"\/tmp\/mesos\/fetch\/slaves\/7cbc133f-24ac-4937-aa28-09e8c81b647b-S6","items":[{"action":"BYPASS_CACHE","uri":{"executable":true,"extract":true,"value":"\/usr\/share\/aurora\/bin\/thermos_executor.pex"}}],"sandbox_directory":"\/var\/lib\/mesos\/slaves\/7cbc133f-24ac-4937-aa28-09e8c81b647b-S6\/frameworks\/47934424-623f-4fcb-9326-bf668149fc77-0000\/executors\/thermos-root-prod-test-0-cfb60c44-5153-4c92-b03a-393ba7de40b2\/runs\/bb3269f4-54e3-4509-98b5-8125a3cdeb14"}
I0308 21:47:18.774142  3579 fetcher.cpp:409] Fetching URI '/usr/share/aurora/bin/thermos_executor.pex'
I0308 21:47:18.774230  3579 fetcher.cpp:250] Fetching directly into the sandbox directory
I0308 21:47:18.774284  3579 fetcher.cpp:187] Fetching URI '/usr/share/aurora/bin/thermos_executor.pex'
I0308 21:47:18.774340  3579 fetcher.cpp:167] Copying resource with command:cp '/usr/share/aurora/bin/thermos_executor.pex'
'/var/lib/mesos/slaves/7cbc133f-24ac-4937-aa28-09e8c81b647b-S6/frameworks/47934424-623f-4fcb-9326-bf668149fc77-0000/executors/thermos-root-prod-test-0-cfb60c44-5153-4c92-b03a-393ba7de40b2/runs/bb3269f4-54e3-4509-98b5-8125a3cdeb14/thermos_executor.pex'
I0308 21:47:18.804293  3579 fetcher.cpp:547] Fetched '/usr/share/aurora/bin/thermos_executor.pex'
to '/var/lib/mesos/slaves/7cbc133f-24ac-4937-aa28-09e8c81b647b-S6/frameworks/47934424-623f-4fcb-9326-bf668149fc77-0000/executors/thermos-root-prod-test-0-cfb60c44-5153-4c92-b03a-393ba7de40b2/runs/bb3269f4-54e3-4509-98b5-8125a3cdeb14/thermos_executor.pex'
WARNING: Your kernel does not support swap limit capabilities or the cgroup is not mounted.
Memory limited without swap.
Traceback (most recent call last):
  File "apache/aurora/executor/bin/thermos_executor_main.py", line 45, in <module>
    from mesos.executor import MesosExecutorDriver
  File "/root/.pex/install/mesos.executor-1.1.0-py2.7-linux-x86_64.egg.47fa022c99c11c7faddf379cbfc46a25c5f215be/mesos.executor-1.1.0-py2.7-linux-x86_64.egg/mesos/executor/__init__.py",
line 17, in <module>
    from ._executor import MesosExecutorDriverImpl as MesosExecutorDriver
ImportError: /usr/lib/x86_64-linux-gnu/libstdc++.so.6: version `GLIBCXX_3.4.20' not found
(required by /root/.pex/install/mesos.executor-1.1.0-py2.7-linux-x86_64.egg.47fa022c99c11c7faddf379cbfc46a25c5f215be/mesos.executor-1.1.0-py2.7-linux-x86_64.egg/mesos/executor/_executor.so)

twitter.common.app debug: Initializing: twitter.common.log (Logging subsystem.)
Writing log files to disk in /mnt/mesos/sandbox
thermos_executor.pex: error: Could not load MesosExecutorDriver!
twitter.common.app debug: main sys.exited
twitter.common.app debug: Shutting application down.
twitter.common.app debug: Running exit function for twitter.common.log (Logging subsystem.)
twitter.common.app debug: Finishing up module teardown.
twitter.common.app debug:   Active thread: <_MainThread(MainThread, started 140671274604352)>
twitter.common.app debug: Exiting cleanly.
{code}
Tested affected systems(with absent of GLIBCXX_3.4.20):
Debian 8
Ubuntu 14.04

How to reproduce:
1) Prepare Docker image with Python 2.7. Example of Dockerfile:
{code}
FROM ubuntu:14.04

RUN apt-get -y update && apt-get -y install python2.7
{code}
2) build and push image to some repo, example:
{code}


> Docker containers with not newest OS fails to run
> -------------------------------------------------
>
>                 Key: AURORA-1902
>                 URL: https://issues.apache.org/jira/browse/AURORA-1902
>             Project: Aurora
>          Issue Type: Bug
>          Components: Docker, Executor
>    Affects Versions: 0.17.0
>         Environment: Ubuntu: 16.04
> Mesos: 1.1.0
> Aurora: 0.17.0
> Dockerengine: 1.13.1
>            Reporter: Mikhail Lesyk
>
> When trying to launch Docker containers, got an error:
> {code}
> I0308 21:47:18.769095  3579 fetcher.cpp:498] Fetcher Info: {"cache_directory":"\/tmp\/mesos\/fetch\/slaves\/7cbc133f-24ac-4937-aa28-09e8c81b647b-S6","items":[{"action":"BYPASS_CACHE","uri":{"executable":true,"extract":true,"value":"\/usr\/share\/aurora\/bin\/thermos_executor.pex"}}],"sandbox_directory":"\/var\/lib\/mesos\/slaves\/7cbc133f-24ac-4937-aa28-09e8c81b647b-S6\/frameworks\/47934424-623f-4fcb-9326-bf668149fc77-0000\/executors\/thermos-root-prod-test-0-cfb60c44-5153-4c92-b03a-393ba7de40b2\/runs\/bb3269f4-54e3-4509-98b5-8125a3cdeb14"}
> I0308 21:47:18.774142  3579 fetcher.cpp:409] Fetching URI '/usr/share/aurora/bin/thermos_executor.pex'
> I0308 21:47:18.774230  3579 fetcher.cpp:250] Fetching directly into the sandbox directory
> I0308 21:47:18.774284  3579 fetcher.cpp:187] Fetching URI '/usr/share/aurora/bin/thermos_executor.pex'
> I0308 21:47:18.774340  3579 fetcher.cpp:167] Copying resource with command:cp '/usr/share/aurora/bin/thermos_executor.pex'
'/var/lib/mesos/slaves/7cbc133f-24ac-4937-aa28-09e8c81b647b-S6/frameworks/47934424-623f-4fcb-9326-bf668149fc77-0000/executors/thermos-root-prod-test-0-cfb60c44-5153-4c92-b03a-393ba7de40b2/runs/bb3269f4-54e3-4509-98b5-8125a3cdeb14/thermos_executor.pex'
> I0308 21:47:18.804293  3579 fetcher.cpp:547] Fetched '/usr/share/aurora/bin/thermos_executor.pex'
to '/var/lib/mesos/slaves/7cbc133f-24ac-4937-aa28-09e8c81b647b-S6/frameworks/47934424-623f-4fcb-9326-bf668149fc77-0000/executors/thermos-root-prod-test-0-cfb60c44-5153-4c92-b03a-393ba7de40b2/runs/bb3269f4-54e3-4509-98b5-8125a3cdeb14/thermos_executor.pex'
> WARNING: Your kernel does not support swap limit capabilities or the cgroup is not mounted.
Memory limited without swap.
> Traceback (most recent call last):
>   File "apache/aurora/executor/bin/thermos_executor_main.py", line 45, in <module>
>     from mesos.executor import MesosExecutorDriver
>   File "/root/.pex/install/mesos.executor-1.1.0-py2.7-linux-x86_64.egg.47fa022c99c11c7faddf379cbfc46a25c5f215be/mesos.executor-1.1.0-py2.7-linux-x86_64.egg/mesos/executor/__init__.py",
line 17, in <module>
>     from ._executor import MesosExecutorDriverImpl as MesosExecutorDriver
> ImportError: /usr/lib/x86_64-linux-gnu/libstdc++.so.6: version `GLIBCXX_3.4.20' not found
(required by /root/.pex/install/mesos.executor-1.1.0-py2.7-linux-x86_64.egg.47fa022c99c11c7faddf379cbfc46a25c5f215be/mesos.executor-1.1.0-py2.7-linux-x86_64.egg/mesos/executor/_executor.so)
> twitter.common.app debug: Initializing: twitter.common.log (Logging subsystem.)
> Writing log files to disk in /mnt/mesos/sandbox
> thermos_executor.pex: error: Could not load MesosExecutorDriver!
> twitter.common.app debug: main sys.exited
> twitter.common.app debug: Shutting application down.
> twitter.common.app debug: Running exit function for twitter.common.log (Logging subsystem.)
> twitter.common.app debug: Finishing up module teardown.
> twitter.common.app debug:   Active thread: <_MainThread(MainThread, started 140671274604352)>
> twitter.common.app debug: Exiting cleanly.
> {code}
> Tested affected systems(with absent of GLIBCXX_3.4.20):
> Debian 8
> Ubuntu 14.04
> How to reproduce:
> 1) Prepare Docker image with Python 2.7. Example of Dockerfile:
> {code}
> FROM ubuntu:14.04
> RUN apt-get -y update && apt-get -y install python2.7
> {code}
> 2) build and push image to some repo, example:
> {code}
> docker build -t mlesyk/ubuntu:14.04 . && docker push mlesyk/ubuntu:14.04
> {code}



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