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From "Hemanth Yamijala (JIRA)" <j...@apache.org>
Subject [jira] [Commented] (ATLAS-930) QuickStart is failing when run after a specific sequence of operations
Date Tue, 21 Jun 2016 12:52:57 GMT

    [ https://issues.apache.org/jira/browse/ATLAS-930?page=com.atlassian.jira.plugin.system.issuetabpanels:comment-tabpanel&focusedCommentId=15341709#comment-15341709
] 

Hemanth Yamijala commented on ATLAS-930:
----------------------------------------

Right, so with more debugging, the case is narrowed to:

* Create a hive table
* Call the API api/atlas/lineage/{GUID}/inputs/graph
* Run quick start - the failure is seen

The reason for the failure seems to be that the new lineage APIs are missing the {{GraphTransaction}}
annotation. Hence the cause is similar to what we saw in ATLAS-805, except it is happening
at a different place.

I'll put up a patch that hopefully fixes this.

> QuickStart is failing when run after a specific sequence of operations
> ----------------------------------------------------------------------
>
>                 Key: ATLAS-930
>                 URL: https://issues.apache.org/jira/browse/ATLAS-930
>             Project: Atlas
>          Issue Type: Bug
>            Reporter: Hemanth Yamijala
>         Attachments: application.log.qs-fail-after-hive
>
>
> I am seeing quick start fail with the same exception as in ATLAS-805. However, I need
a more complicated sequence of operations to reproduce the problem. After many, many attempts,
I am boiling this down to:
> * Create a hive table via the hive hook
> * Launch Atlas Admin UI
> * Create the default business taxonomy
> * Run a DSL query querying for hive_table
> * Select the table ingested in step 1
> * Run quick start.
> It fails with this exception:
> {code}
> Exception in thread "main" org.apache.atlas.AtlasServiceException: Metadata service API
CREATE_ENTITY failed with status 500(Internal Server Error) Response Body ({"error":"Could
not commit transaction due to exception during persistence","stackTrace":"com.thinkaurelius.titan.core.TitanException:
Could not commit transaction due to exception during persistence\n\tat com.thinkaurelius.titan.graphdb.transaction.StandardTitanTx.commit(StandardTitanTx.java:1348)\n\tat
com.thinkaurelius.titan.graphdb.blueprints.TitanBlueprintsGraph.commit(TitanBlueprintsGraph.java:60)\n\tat
org.apache.atlas.GraphTransactionInterceptor.invoke(GraphTransactionInterceptor.java:43)\n\tat
org.apache.atlas.services.DefaultMetadataService.createEntities(DefaultMetadataService.java:323)\n\tat
org.apache.atlas.services.DefaultMetadataService.createEntities(DefaultMetadataService.java:319)\n\tat
org.apache.atlas.web.resources.EntityResource.submit(EntityResource.java:125)\n\tat sun.reflect.NativeMethodAccessorImpl.invoke0(Native
Method)\n\tat sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:57)\n\tat
sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)\n\tat
java.lang.reflect.Method.invoke(Method.java:606)\n\tat com.sun.jersey.spi.container.JavaMethodInvokerFactory$1.invoke(JavaMethodInvokerFactory.java:60)\n\tat
com.sun.jersey.server.impl.model.method.dispatch.AbstractResourceMethodDispatchProvider$ResponseOutInvoker._dispatch(AbstractResourceMethodDispatchProvider.java:205)\n\tat
com.sun.jersey.server.impl.model.method.dispatch.ResourceJavaMethodDispatcher.dispatch(ResourceJavaMethodDispatcher.java:75)\n\tat
com.sun.jersey.server.impl.uri.rules.HttpMethodRule.accept(HttpMethodRule.java:302)\n\tat
com.sun.jersey.server.impl.uri.rules.ResourceClassRule.accept(ResourceClassRule.java:108)\n\tat
com.sun.jersey.server.impl.uri.rules.RightHandPathRule.accept(RightHandPathRule.java:147)\n\tat
com.sun.jersey.server.impl.uri.rules.RootResourceClassesRule.accept(RootResourceClassesRule.java:84)\n\tat
com.sun.jersey.server.impl.application.WebApplicationImpl._handleRequest(WebApplicationImpl.java:1542)\n\tat
com.sun.jersey.server.impl.application.WebApplicationImpl._handleRequest(WebApplicationImpl.java:1473)\n\tat
com.sun.jersey.server.impl.application.WebApplicationImpl.handleRequest(WebApplicationImpl.java:1419)\n\tat
com.sun.jersey.server.impl.application.WebApplicationImpl.handleRequest(WebApplicationImpl.java:1409)\n\tat
com.sun.jersey.spi.container.servlet.WebComponent.service(WebComponent.java:409)\n\tat com.sun.jersey.spi.container.servlet.ServletContainer.service(ServletContainer.java:558)\n\tat
com.sun.jersey.spi.container.servlet.ServletContainer.service(ServletContainer.java:733)\n\tat
javax.servlet.http.HttpServlet.service(HttpServlet.java:790)\n\tat com.google.inject.servlet.ServletDefinition.doServiceImpl(ServletDefinition.java:287)\n\tat
com.google.inject.servlet.ServletDefinition.doService(ServletDefinition.java:277)\n\tat com.google.inject.servlet.ServletDefinition.service(ServletDefinition.java:182)\n\tat
com.google.inject.servlet.ManagedServletPipeline.service(ManagedServletPipeline.java:91)\n\tat
com.google.inject.servlet.FilterChainInvocation.doFilter(FilterChainInvocation.java:85)\n\tat
org.apache.atlas.web.filters.AuditFilter.doFilter(AuditFilter.java:71)\n\tat com.google.inject.servlet.FilterChainInvocation.doFilter(FilterChainInvocation.java:82)\n\tat
com.google.inject.servlet.ManagedFilterPipeline.dispatch(ManagedFilterPipeline.java:119)\n\tat
com.google.inject.servlet.GuiceFilter$1.call(GuiceFilter.java:133)\n\tat com.google.inject.servlet.GuiceFilter$1.call(GuiceFilter.java:130)\n\tat
com.google.inject.servlet.GuiceFilter$Context.call(GuiceFilter.java:203)\n\tat com.google.inject.servlet.GuiceFilter.doFilter(GuiceFilter.java:130)\n\tat
org.eclipse.jetty.servlet.ServletHandler$CachedChain.doFilter(ServletHandler.java:1652)\n\tat
org.springframework.security.web.FilterChainProxy$VirtualFilterChain.doFilter(FilterChainProxy.java:330)\n\tat
org.apache.atlas.web.filters.AtlasAuthorizationFilter.doFilter(AtlasAuthorizationFilter.java:154)\n\tat
org.springframework.security.web.FilterChainProxy$VirtualFilterChain.doFilter(FilterChainProxy.java:342)\n\tat
org.springframework.security.web.access.intercept.FilterSecurityInterceptor.invoke(FilterSecurityInterceptor.java:118)\n\tat
org.springframework.security.web.access.intercept.FilterSecurityInterceptor.doFilter(FilterSecurityInterceptor.java:84)\n\tat
org.springframework.security.web.FilterChainProxy$VirtualFilterChain.doFilter(FilterChainProxy.java:342)\n\tat
org.springframework.security.web.access.ExceptionTranslationFilter.doFilter(ExceptionTranslationFilter.java:113)\n\tat
org.springframework.security.web.FilterChainProxy$VirtualFilterChain.doFilter(FilterChainProxy.java:342)\n\tat
org.springframework.security.web.session.SessionManagementFilter.doFilter(SessionManagementFilter.java:103)\n\tat
org.springframework.security.web.FilterChainProxy$VirtualFilterChain.doFilter(FilterChainProxy.java:342)\n\tat
org.springframework.security.web.authentication.AnonymousAuthenticationFilter.doFilter(AnonymousAuthenticationFilter.java:113)\n\tat
org.springframework.security.web.FilterChainProxy$VirtualFilterChain.doFilter(FilterChainProxy.java:342)\n\tat
org.apache.atlas.web.filters.AtlasAuthenticationFilter.doFilter(AtlasAuthenticationFilter.java:297)\n\tat
org.springframework.security.web.FilterChainProxy$VirtualFilterChain.doFilter(FilterChainProxy.java:342)\n\tat
org.springframework.security.web.servletapi.SecurityContextHolderAwareRequestFilter.doFilter(SecurityContextHolderAwareRequestFilter.java:54)\n\tat
org.springframework.security.web.FilterChainProxy$VirtualFilterChain.doFilter(FilterChainProxy.java:342)\n\tat
org.springframework.security.web.savedrequest.RequestCacheAwareFilter.doFilter(RequestCacheAwareFilter.java:45)\n\tat
org.springframework.security.web.FilterChainProxy$VirtualFilterChain.doFilter(FilterChainProxy.java:342)\n\tat
org.springframework.security.web.authentication.www.BasicAuthenticationFilter.doFilter(BasicAuthenticationFilter.java:201)\n\tat
org.springframework.security.web.FilterChainProxy$VirtualFilterChain.doFilter(FilterChainProxy.java:342)\n\tat
org.springframework.security.web.authentication.AbstractAuthenticationProcessingFilter.doFilter(AbstractAuthenticationProcessingFilter.java:183)\n\tat
org.springframework.security.web.FilterChainProxy$VirtualFilterChain.doFilter(FilterChainProxy.java:342)\n\tat
org.springframework.security.web.authentication.logout.LogoutFilter.doFilter(LogoutFilter.java:105)\n\tat
org.springframework.security.web.FilterChainProxy$VirtualFilterChain.doFilter(FilterChainProxy.java:342)\n\tat
org.springframework.security.web.context.SecurityContextPersistenceFilter.doFilter(SecurityContextPersistenceFilter.java:87)\n\tat
org.springframework.security.web.FilterChainProxy$VirtualFilterChain.doFilter(FilterChainProxy.java:342)\n\tat
org.springframework.security.web.FilterChainProxy.doFilterInternal(FilterChainProxy.java:192)\n\tat
org.springframework.security.web.FilterChainProxy.doFilter(FilterChainProxy.java:160)\n\tat
org.springframework.web.filter.DelegatingFilterProxy.invokeDelegate(DelegatingFilterProxy.java:346)\n\tat
org.springframework.web.filter.DelegatingFilterProxy.doFilter(DelegatingFilterProxy.java:259)\n\tat
org.eclipse.jetty.servlet.ServletHandler$CachedChain.doFilter(ServletHandler.java:1652)\n\tat
org.eclipse.jetty.servlet.ServletHandler.doHandle(ServletHandler.java:585)\n\tat org.eclipse.jetty.server.handler.ScopedHandler.handle(ScopedHandler.java:143)\n\tat
org.eclipse.jetty.security.SecurityHandler.handle(SecurityHandler.java:577)\n\tat org.eclipse.jetty.server.session.SessionHandler.doHandle(SessionHandler.java:223)\n\tat
org.eclipse.jetty.server.handler.ContextHandler.doHandle(ContextHandler.java:1127)\n\tat org.eclipse.jetty.servlet.ServletHandler.doScope(ServletHandler.java:515)\n\tat
org.eclipse.jetty.server.session.SessionHandler.doScope(SessionHandler.java:185)\n\tat org.eclipse.jetty.server.handler.ContextHandler.doScope(ContextHandler.java:1061)\n\tat
org.eclipse.jetty.server.handler.ScopedHandler.handle(ScopedHandler.java:141)\n\tat org.eclipse.jetty.server.handler.HandlerWrapper.handle(HandlerWrapper.java:97)\n\tat
org.eclipse.jetty.server.Server.handle(Server.java:499)\n\tat org.eclipse.jetty.server.HttpChannel.handle(HttpChannel.java:310)\n\tat
org.eclipse.jetty.server.HttpConnection.onFillable(HttpConnection.java:257)\n\tat org.eclipse.jetty.io.AbstractConnection$2.run(AbstractConnection.java:540)\n\tat
org.eclipse.jetty.util.thread.QueuedThreadPool.runJob(QueuedThreadPool.java:635)\n\tat org.eclipse.jetty.util.thread.QueuedThreadPool$3.run(QueuedThreadPool.java:555)\n\tat
java.lang.Thread.run(Thread.java:745)\nCaused by: java.lang.NullPointerException\n\tat com.thinkaurelius.titan.graphdb.database.IndexSerializer.getIndexUpdates(IndexSerializer.java:318)\n\tat
com.thinkaurelius.titan.graphdb.database.StandardTitanGraph.prepareCommit(StandardTitanGraph.java:492)\n\tat
com.thinkaurelius.titan.graphdb.database.StandardTitanGraph.commit(StandardTitanGraph.java:654)\n\tat
com.thinkaurelius.titan.graphdb.transaction.StandardTitanTx.commit(StandardTitanTx.java:1337)\n\t...
85 more\n"})
> 	at org.apache.atlas.AtlasClient.callAPIWithResource(AtlasClient.java:1151)
> 	at org.apache.atlas.AtlasClient.callAPIWithRetries(AtlasClient.java:719)
> 	at org.apache.atlas.AtlasClient.callAPI(AtlasClient.java:1156)
> 	at org.apache.atlas.AtlasClient.createEntity(AtlasClient.java:629)
> 	at org.apache.atlas.AtlasClient.createEntity(AtlasClient.java:646)
> 	at org.apache.atlas.examples.QuickStart.createInstance(QuickStart.java:316)
> 	at org.apache.atlas.examples.QuickStart.database(QuickStart.java:333)
> 	at org.apache.atlas.examples.QuickStart.createEntities(QuickStart.java:231)
> 	at org.apache.atlas.examples.QuickStart.runQuickstart(QuickStart.java:97)
> 	at org.apache.atlas.examples.QuickStart.main(QuickStart.java:79)
> No data was added to the Apache Atlas Server.
> {code}



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