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From "Siddharth Wagle (JIRA)" <j...@apache.org>
Subject [jira] [Assigned] (AMBARI-22631) Hive MetaStore does not start after passing the mysql-connector path to ambari-server
Date Tue, 12 Dec 2017 00:05:00 GMT

     [ https://issues.apache.org/jira/browse/AMBARI-22631?page=com.atlassian.jira.plugin.system.issuetabpanels:all-tabpanel
]

Siddharth Wagle reassigned AMBARI-22631:
----------------------------------------

    Assignee: Myroslav Papirkovskyi

> Hive MetaStore does not start after passing the mysql-connector path to ambari-server
> -------------------------------------------------------------------------------------
>
>                 Key: AMBARI-22631
>                 URL: https://issues.apache.org/jira/browse/AMBARI-22631
>             Project: Ambari
>          Issue Type: Bug
>          Components: ambari-server
>    Affects Versions: 2.6.1
>            Reporter: Srikanth Janardhan
>            Assignee: Myroslav Papirkovskyi
>            Priority: Blocker
>             Fix For: 2.6.1
>
>
> STR:
> # Install ambari-server (with embedded DB) and setup hosts
> # Initiate installation of HDP stack and follow the wizard to Configure Services Page
> # In the Hive Config tab, follow the steps in the info box to install mysql-connector.
> # Continue with the steps and initiate deployment of HDP
> Found that even after executing the following command (as per the info box), Hive Metastore
does not start
> {code:bash}
> [root@sj-qe16187-6 ~]# ambari-server setup --jdbc-db=mysql --jdbc-driver=/root/mysql-connector-java.jar
> Using python  /usr/bin/python
> Setup ambari-server
> Copying /root/mysql-connector-java.jar to /var/lib/ambari-server/resources
> If you are updating existing jdbc driver jar for mysql with mysql-connector-java.jar.
Please remove the old driver jar, from all hosts. Restarting services that need the driver,
will automatically copy the new jar to the hosts.
> JDBC driver was successfully initialized.
> Ambari Server 'setup' completed successfully.
> {code}
> Hive Metastore (on host 2), cannot find mysql-connector-java.jar in /usr/share/java :
> {code}
> stderr:   /var/lib/ambari-agent/data/errors-202.txt
> Traceback (most recent call last):
>   File "/var/lib/ambari-agent/cache/common-services/HIVE/0.12.0.2.0/package/scripts/hive_metastore.py",
line 203, in <module>
>     HiveMetastore().execute()
>   File "/usr/lib/python2.6/site-packages/resource_management/libraries/script/script.py",
line 375, in execute
>     method(env)
>   File "/var/lib/ambari-agent/cache/common-services/HIVE/0.12.0.2.0/package/scripts/hive_metastore.py",
line 54, in start
>     self.configure(env)
>   File "/usr/lib/python2.6/site-packages/resource_management/libraries/script/script.py",
line 120, in locking_configure
>     original_configure(obj, *args, **kw)
>   File "/var/lib/ambari-agent/cache/common-services/HIVE/0.12.0.2.0/package/scripts/hive_metastore.py",
line 72, in configure
>     hive(name = 'metastore')
>   File "/usr/lib/python2.6/site-packages/ambari_commons/os_family_impl.py", line 89,
in thunk
>     return fn(*args, **kwargs)
>   File "/var/lib/ambari-agent/cache/common-services/HIVE/0.12.0.2.0/package/scripts/hive.py",
line 310, in hive
>     jdbc_connector(params.hive_jdbc_target, params.hive_previous_jdbc_jar)
>   File "/var/lib/ambari-agent/cache/common-services/HIVE/0.12.0.2.0/package/scripts/hive.py",
line 555, in jdbc_connector
>     sudo=True
>   File "/usr/lib/python2.6/site-packages/resource_management/core/base.py", line 166,
in __init__
>     self.env.run()
>   File "/usr/lib/python2.6/site-packages/resource_management/core/environment.py", line
160, in run
>     self.run_action(resource, action)
>   File "/usr/lib/python2.6/site-packages/resource_management/core/environment.py", line
124, in run_action
>     provider_action()
>   File "/usr/lib/python2.6/site-packages/resource_management/core/providers/system.py",
line 262, in action_run
>     tries=self.resource.tries, try_sleep=self.resource.try_sleep)
>   File "/usr/lib/python2.6/site-packages/resource_management/core/shell.py", line 72,
in inner
>     result = function(command, **kwargs)
>   File "/usr/lib/python2.6/site-packages/resource_management/core/shell.py", line 102,
in checked_call
>     tries=tries, try_sleep=try_sleep, timeout_kill_strategy=timeout_kill_strategy)
>   File "/usr/lib/python2.6/site-packages/resource_management/core/shell.py", line 150,
in _call_wrapper
>     result = _call(command, **kwargs_copy)
>   File "/usr/lib/python2.6/site-packages/resource_management/core/shell.py", line 303,
in _call
>     raise ExecutionFailed(err_msg, code, out, err)
> resource_management.core.exceptions.ExecutionFailed: Execution of 'cp --remove-destination
/usr/share/java/mysql-connector-java.jar /usr/hdp/current/hive-metastore/lib/mysql-connector-java.jar'
returned 1. cp: cannot stat `/usr/share/java/mysql-connector-java.jar': No such file or directory
> stdout:   /var/lib/ambari-agent/data/output-202.txt
> 2017-12-11 13:01:52,206 - Stack Feature Version Info: Cluster Stack=2.6, Command Stack=None,
Command Version=2.6.4.0-70 -> 2.6.4.0-70
> 2017-12-11 13:01:52,210 - Using hadoop conf dir: /usr/hdp/2.6.4.0-70/hadoop/conf
> 2017-12-11 13:01:52,418 - Stack Feature Version Info: Cluster Stack=2.6, Command Stack=None,
Command Version=2.6.4.0-70 -> 2.6.4.0-70
> 2017-12-11 13:01:52,419 - Using hadoop conf dir: /usr/hdp/2.6.4.0-70/hadoop/conf
> 2017-12-11 13:01:52,420 - Group['hdfs'] {}
> 2017-12-11 13:01:52,422 - Group['hadoop'] {}
> 2017-12-11 13:01:52,422 - Group['users'] {}
> 2017-12-11 13:01:52,423 - User['hive'] {'gid': 'hadoop', 'fetch_nonlocal_groups': True,
'groups': ['hadoop'], 'uid': None}
> 2017-12-11 13:01:52,424 - User['zookeeper'] {'gid': 'hadoop', 'fetch_nonlocal_groups':
True, 'groups': ['hadoop'], 'uid': None}
> 2017-12-11 13:01:52,425 - User['oozie'] {'gid': 'hadoop', 'fetch_nonlocal_groups': True,
'groups': ['users'], 'uid': None}
> 2017-12-11 13:01:52,426 - User['ams'] {'gid': 'hadoop', 'fetch_nonlocal_groups': True,
'groups': ['hadoop'], 'uid': None}
> 2017-12-11 13:01:52,427 - User['ambari-qa'] {'gid': 'hadoop', 'fetch_nonlocal_groups':
True, 'groups': ['users'], 'uid': None}
> 2017-12-11 13:01:52,428 - User['tez'] {'gid': 'hadoop', 'fetch_nonlocal_groups': True,
'groups': ['users'], 'uid': None}
> 2017-12-11 13:01:52,429 - User['hdfs'] {'gid': 'hadoop', 'fetch_nonlocal_groups': True,
'groups': ['hdfs'], 'uid': None}
> 2017-12-11 13:01:52,430 - User['yarn'] {'gid': 'hadoop', 'fetch_nonlocal_groups': True,
'groups': ['hadoop'], 'uid': None}
> 2017-12-11 13:01:52,431 - User['mapred'] {'gid': 'hadoop', 'fetch_nonlocal_groups': True,
'groups': ['hadoop'], 'uid': None}
> 2017-12-11 13:01:52,432 - User['hbase'] {'gid': 'hadoop', 'fetch_nonlocal_groups': True,
'groups': ['hadoop'], 'uid': None}
> 2017-12-11 13:01:52,433 - User['hcat'] {'gid': 'hadoop', 'fetch_nonlocal_groups': True,
'groups': ['hadoop'], 'uid': None}
> 2017-12-11 13:01:52,434 - File['/var/lib/ambari-agent/tmp/changeUid.sh'] {'content':
StaticFile('changeToSecureUid.sh'), 'mode': 0555}
> 2017-12-11 13:01:52,439 - Execute['/var/lib/ambari-agent/tmp/changeUid.sh ambari-qa /tmp/hadoop-ambari-qa,/tmp/hsperfdata_ambari-qa,/home/ambari-qa,/tmp/ambari-qa,/tmp/sqoop-ambari-qa
0'] {'not_if': '(test $(id -u ambari-qa) -gt 1000) || (false)'}
> 2017-12-11 13:01:52,452 - Skipping Execute['/var/lib/ambari-agent/tmp/changeUid.sh ambari-qa
/tmp/hadoop-ambari-qa,/tmp/hsperfdata_ambari-qa,/home/ambari-qa,/tmp/ambari-qa,/tmp/sqoop-ambari-qa
0'] due to not_if
> 2017-12-11 13:01:52,452 - Directory['/tmp/hbase-hbase'] {'owner': 'hbase', 'create_parents':
True, 'mode': 0775, 'cd_access': 'a'}
> 2017-12-11 13:01:52,453 - File['/var/lib/ambari-agent/tmp/changeUid.sh'] {'content':
StaticFile('changeToSecureUid.sh'), 'mode': 0555}
> 2017-12-11 13:01:52,455 - File['/var/lib/ambari-agent/tmp/changeUid.sh'] {'content':
StaticFile('changeToSecureUid.sh'), 'mode': 0555}
> 2017-12-11 13:01:52,456 - call['/var/lib/ambari-agent/tmp/changeUid.sh hbase'] {}
> 2017-12-11 13:01:52,471 - call returned (0, '1002')
> 2017-12-11 13:01:52,472 - Execute['/var/lib/ambari-agent/tmp/changeUid.sh hbase /home/hbase,/tmp/hbase,/usr/bin/hbase,/var/log/hbase,/tmp/hbase-hbase
1002'] {'not_if': '(test $(id -u hbase) -gt 1000) || (false)'}
> 2017-12-11 13:01:52,484 - Skipping Execute['/var/lib/ambari-agent/tmp/changeUid.sh hbase
/home/hbase,/tmp/hbase,/usr/bin/hbase,/var/log/hbase,/tmp/hbase-hbase 1002'] due to not_if
> 2017-12-11 13:01:52,485 - Group['hdfs'] {}
> 2017-12-11 13:01:52,485 - User['hdfs'] {'fetch_nonlocal_groups': True, 'groups': ['hdfs',
'hdfs']}
> 2017-12-11 13:01:52,486 - FS Type: 
> 2017-12-11 13:01:52,486 - Directory['/etc/hadoop'] {'mode': 0755}
> 2017-12-11 13:01:52,510 - File['/usr/hdp/2.6.4.0-70/hadoop/conf/hadoop-env.sh'] {'content':
InlineTemplate(...), 'owner': 'hdfs', 'group': 'hadoop'}
> 2017-12-11 13:01:52,511 - Directory['/var/lib/ambari-agent/tmp/hadoop_java_io_tmpdir']
{'owner': 'hdfs', 'group': 'hadoop', 'mode': 01777}
> 2017-12-11 13:01:52,530 - Execute[('setenforce', '0')] {'not_if': '(! which getenforce
) || (which getenforce && getenforce | grep -q Disabled)', 'sudo': True, 'only_if':
'test -f /selinux/enforce'}
> 2017-12-11 13:01:52,571 - Directory['/var/log/hadoop'] {'owner': 'root', 'create_parents':
True, 'group': 'hadoop', 'mode': 0775, 'cd_access': 'a'}
> 2017-12-11 13:01:52,573 - Directory['/var/run/hadoop'] {'owner': 'root', 'create_parents':
True, 'group': 'root', 'cd_access': 'a'}
> 2017-12-11 13:01:52,573 - Directory['/tmp/hadoop-hdfs'] {'owner': 'hdfs', 'create_parents':
True, 'cd_access': 'a'}
> 2017-12-11 13:01:52,579 - File['/usr/hdp/2.6.4.0-70/hadoop/conf/commons-logging.properties']
{'content': Template('commons-logging.properties.j2'), 'owner': 'hdfs'}
> 2017-12-11 13:01:52,581 - File['/usr/hdp/2.6.4.0-70/hadoop/conf/health_check'] {'content':
Template('health_check.j2'), 'owner': 'hdfs'}
> 2017-12-11 13:01:52,590 - File['/usr/hdp/2.6.4.0-70/hadoop/conf/log4j.properties'] {'content':
InlineTemplate(...), 'owner': 'hdfs', 'group': 'hadoop', 'mode': 0644}
> 2017-12-11 13:01:52,605 - File['/usr/hdp/2.6.4.0-70/hadoop/conf/hadoop-metrics2.properties']
{'content': InlineTemplate(...), 'owner': 'hdfs', 'group': 'hadoop'}
> 2017-12-11 13:01:52,606 - File['/usr/hdp/2.6.4.0-70/hadoop/conf/task-log4j.properties']
{'content': StaticFile('task-log4j.properties'), 'mode': 0755}
> 2017-12-11 13:01:52,607 - File['/usr/hdp/2.6.4.0-70/hadoop/conf/configuration.xsl'] {'owner':
'hdfs', 'group': 'hadoop'}
> 2017-12-11 13:01:52,614 - File['/etc/hadoop/conf/topology_mappings.data'] {'owner': 'hdfs',
'content': Template('topology_mappings.data.j2'), 'only_if': 'test -d /etc/hadoop/conf', 'group':
'hadoop', 'mode': 0644}
> 2017-12-11 13:01:52,626 - File['/etc/hadoop/conf/topology_script.py'] {'content': StaticFile('topology_script.py'),
'only_if': 'test -d /etc/hadoop/conf', 'mode': 0755}
> 2017-12-11 13:01:52,928 - MariaDB RedHat Support: false
> 2017-12-11 13:01:52,932 - Using hadoop conf dir: /usr/hdp/2.6.4.0-70/hadoop/conf
> 2017-12-11 13:01:52,943 - call['ambari-python-wrap /usr/bin/hdp-select status hive-server2']
{'timeout': 20}
> 2017-12-11 13:01:52,980 - call returned (0, 'hive-server2 - 2.6.4.0-70')
> 2017-12-11 13:01:52,981 - Stack Feature Version Info: Cluster Stack=2.6, Command Stack=None,
Command Version=2.6.4.0-70 -> 2.6.4.0-70
> 2017-12-11 13:01:52,988 - File['/var/lib/ambari-agent/cred/lib/CredentialUtil.jar'] {'content':
DownloadSource('http://sj-qe16187-6.openstacklocal:8080/resources/CredentialUtil.jar'), 'mode':
0755}
> 2017-12-11 13:01:52,990 - Not downloading the file from http://sj-qe16187-6.openstacklocal:8080/resources/CredentialUtil.jar,
because /var/lib/ambari-agent/tmp/CredentialUtil.jar already exists
> 2017-12-11 13:01:52,990 - checked_call[('/usr/jdk64/jdk1.8.0_112/bin/java', '-cp', '/var/lib/ambari-agent/cred/lib/*',
'org.apache.ambari.server.credentialapi.CredentialUtil', 'get', 'javax.jdo.option.ConnectionPassword',
'-provider', 'jceks://file/var/lib/ambari-agent/cred/conf/hive_metastore/hive-site.jceks')]
{}
> 2017-12-11 13:01:54,125 - checked_call returned (0, 'SLF4J: Failed to load class "org.slf4j.impl.StaticLoggerBinder".\nSLF4J:
Defaulting to no-operation (NOP) logger implementation\nSLF4J: See http://www.slf4j.org/codes.html#StaticLoggerBinder
for further details.\nDec 11, 2017 1:01:53 PM org.apache.hadoop.util.NativeCodeLoader <clinit>\nWARNING:
Unable to load native-hadoop library for your platform... using builtin-java classes where
applicable\nPassword')
> 2017-12-11 13:01:54,137 - Stack Feature Version Info: Cluster Stack=2.6, Command Stack=None,
Command Version=2.6.4.0-70 -> 2.6.4.0-70
> 2017-12-11 13:01:54,138 - Directory['/etc/hive'] {'mode': 0755}
> 2017-12-11 13:01:54,138 - Directories to fill with configs: ['/usr/hdp/current/hive-metastore/conf',
'/usr/hdp/current/hive-metastore/conf/conf.server']
> 2017-12-11 13:01:54,139 - Directory['/etc/hive/2.6.4.0-70/0'] {'owner': 'hive', 'group':
'hadoop', 'create_parents': True, 'mode': 0755}
> 2017-12-11 13:01:54,140 - XmlConfig['mapred-site.xml'] {'group': 'hadoop', 'conf_dir':
'/etc/hive/2.6.4.0-70/0', 'mode': 0644, 'configuration_attributes': {}, 'owner': 'hive', 'configurations':
...}
> 2017-12-11 13:01:54,155 - Generating config: /etc/hive/2.6.4.0-70/0/mapred-site.xml
> 2017-12-11 13:01:54,156 - File['/etc/hive/2.6.4.0-70/0/mapred-site.xml'] {'owner': 'hive',
'content': InlineTemplate(...), 'group': 'hadoop', 'mode': 0644, 'encoding': 'UTF-8'}
> 2017-12-11 13:01:54,213 - File['/etc/hive/2.6.4.0-70/0/hive-default.xml.template'] {'owner':
'hive', 'group': 'hadoop', 'mode': 0644}
> 2017-12-11 13:01:54,214 - File['/etc/hive/2.6.4.0-70/0/hive-env.sh.template'] {'owner':
'hive', 'group': 'hadoop', 'mode': 0644}
> 2017-12-11 13:01:54,216 - File['/etc/hive/2.6.4.0-70/0/hive-exec-log4j.properties'] {'content':
InlineTemplate(...), 'owner': 'hive', 'group': 'hadoop', 'mode': 0644}
> 2017-12-11 13:01:54,220 - File['/etc/hive/2.6.4.0-70/0/hive-log4j.properties'] {'content':
InlineTemplate(...), 'owner': 'hive', 'group': 'hadoop', 'mode': 0644}
> 2017-12-11 13:01:54,221 - File['/etc/hive/2.6.4.0-70/0/parquet-logging.properties'] {'content':
..., 'owner': 'hive', 'group': 'hadoop', 'mode': 0644}
> 2017-12-11 13:01:54,223 - Directory['/etc/hive/2.6.4.0-70/0/conf.server'] {'owner': 'hive',
'group': 'hadoop', 'create_parents': True, 'mode': 0700}
> 2017-12-11 13:01:54,223 - XmlConfig['mapred-site.xml'] {'group': 'hadoop', 'conf_dir':
'/etc/hive/2.6.4.0-70/0/conf.server', 'mode': 0600, 'configuration_attributes': {}, 'owner':
'hive', 'configurations': ...}
> 2017-12-11 13:01:54,235 - Generating config: /etc/hive/2.6.4.0-70/0/conf.server/mapred-site.xml
> 2017-12-11 13:01:54,235 - File['/etc/hive/2.6.4.0-70/0/conf.server/mapred-site.xml']
{'owner': 'hive', 'content': InlineTemplate(...), 'group': 'hadoop', 'mode': 0600, 'encoding':
'UTF-8'}
> 2017-12-11 13:01:54,292 - File['/etc/hive/2.6.4.0-70/0/conf.server/hive-default.xml.template']
{'owner': 'hive', 'group': 'hadoop', 'mode': 0600}
> 2017-12-11 13:01:54,293 - File['/etc/hive/2.6.4.0-70/0/conf.server/hive-env.sh.template']
{'owner': 'hive', 'group': 'hadoop', 'mode': 0600}
> 2017-12-11 13:01:54,295 - File['/etc/hive/2.6.4.0-70/0/conf.server/hive-exec-log4j.properties']
{'content': InlineTemplate(...), 'owner': 'hive', 'group': 'hadoop', 'mode': 0600}
> 2017-12-11 13:01:54,299 - File['/etc/hive/2.6.4.0-70/0/conf.server/hive-log4j.properties']
{'content': InlineTemplate(...), 'owner': 'hive', 'group': 'hadoop', 'mode': 0600}
> 2017-12-11 13:01:54,300 - File['/etc/hive/2.6.4.0-70/0/conf.server/parquet-logging.properties']
{'content': ..., 'owner': 'hive', 'group': 'hadoop', 'mode': 0600}
> 2017-12-11 13:01:54,301 - File['/usr/hdp/current/hive-metastore/conf/conf.server/hive-site.jceks']
{'content': StaticFile('/var/lib/ambari-agent/cred/conf/hive_metastore/hive-site.jceks'),
'owner': 'hive', 'group': 'hadoop', 'mode': 0640}
> 2017-12-11 13:01:54,302 - Writing File['/usr/hdp/current/hive-metastore/conf/conf.server/hive-site.jceks']
because contents don't match
> 2017-12-11 13:01:54,302 - XmlConfig['hive-site.xml'] {'group': 'hadoop', 'conf_dir':
'/usr/hdp/current/hive-metastore/conf/conf.server', 'mode': 0600, 'configuration_attributes':
{'hidden': {'javax.jdo.option.ConnectionPassword': 'HIVE_CLIENT,WEBHCAT_SERVER,HCAT,CONFIG_DOWNLOAD'}},
'owner': 'hive', 'configurations': ...}
> 2017-12-11 13:01:54,314 - Generating config: /usr/hdp/current/hive-metastore/conf/conf.server/hive-site.xml
> 2017-12-11 13:01:54,314 - File['/usr/hdp/current/hive-metastore/conf/conf.server/hive-site.xml']
{'owner': 'hive', 'content': InlineTemplate(...), 'group': 'hadoop', 'mode': 0600, 'encoding':
'UTF-8'}
> 2017-12-11 13:01:54,517 - XmlConfig['hivemetastore-site.xml'] {'group': 'hadoop', 'conf_dir':
'/usr/hdp/current/hive-metastore/conf/conf.server', 'mode': 0600, 'configuration_attributes':
{}, 'owner': 'hive', 'configurations': {'hive.service.metrics.hadoop2.component': 'hivemetastore',
'hive.metastore.metrics.enabled': 'true', 'hive.service.metrics.reporter': 'HADOOP2'}}
> 2017-12-11 13:01:54,531 - Generating config: /usr/hdp/current/hive-metastore/conf/conf.server/hivemetastore-site.xml
> 2017-12-11 13:01:54,532 - File['/usr/hdp/current/hive-metastore/conf/conf.server/hivemetastore-site.xml']
{'owner': 'hive', 'content': InlineTemplate(...), 'group': 'hadoop', 'mode': 0600, 'encoding':
'UTF-8'}
> 2017-12-11 13:01:54,541 - File['/usr/hdp/current/hive-metastore/conf/conf.server/hive-env.sh']
{'content': InlineTemplate(...), 'owner': 'hive', 'group': 'hadoop', 'mode': 0600}
> 2017-12-11 13:01:54,542 - Directory['/etc/security/limits.d'] {'owner': 'root', 'create_parents':
True, 'group': 'root'}
> 2017-12-11 13:01:54,546 - File['/etc/security/limits.d/hive.conf'] {'content': Template('hive.conf.j2'),
'owner': 'root', 'group': 'root', 'mode': 0644}
> 2017-12-11 13:01:54,547 - Execute[('cp', '--remove-destination', '/usr/share/java/mysql-connector-java.jar',
'/usr/hdp/current/hive-metastore/lib/mysql-connector-java.jar')] {'path': ['/bin', '/usr/bin/'],
'sudo': True}
> Command failed after 1 tries
> {code}
> Workaround was to manually transfer the mysql-connector jar to /usr/share/java on the
host where Hive Metastore is installed



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