airavata-issues mailing list archives

Site index · List index
Message view « Date » · « Thread »
Top « Date » · « Thread »
From "Marcus Christie (JIRA)" <j...@apache.org>
Subject [jira] [Commented] (AIRAVATA-3118) Experiment failed with 'Failed to obtain source URI for input data staging task TASK_........'
Date Sat, 13 Jul 2019 22:28:00 GMT

    [ https://issues.apache.org/jira/browse/AIRAVATA-3118?page=com.atlassian.jira.plugin.system.issuetabpanels:comment-tabpanel&focusedCommentId=16884505#comment-16884505
] 

Marcus Christie commented on AIRAVATA-3118:
-------------------------------------------

Stacktrace:
{noformat}
org.apache.airavata.helix.impl.task.TaskOnFailException: Error Code : 106c6a27-baed-40df-aca0-25352643c75a,
Task TASK_26277023-14d2-4640-8468-3a43dc5595cc failed due to Failed to obtain source URI for
input data staging task TASK_26277023-14d2-4640-8468-3a43dc5595cc, Illegal character in path
at index 138: file://pga.staging.scigap.org:/var/www/portals/gateway-user-data/seagrid/thejkane@iu.edu/AJ_Project/Gaussian_on_Jul_12_2019_1254_AM/Screen
Shot 2019-07-12 at 12.14.27 AM.png
	at org.apache.airavata.helix.impl.task.AiravataTask.onFail(AiravataTask.java:141)
	at org.apache.airavata.helix.impl.task.staging.InputDataStagingTask.onRun(InputDataStagingTask.java:102)
	at org.apache.airavata.helix.impl.task.AiravataTask.onRun(AiravataTask.java:362)
	at org.apache.airavata.helix.core.AbstractTask.run(AbstractTask.java:92)
	at org.apache.helix.task.TaskRunner.run(TaskRunner.java:71)
	at java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:511)
	at java.util.concurrent.FutureTask.run(FutureTask.java:266)
	at java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.access$201(ScheduledThreadPoolExecutor.java:180)
	at java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:293)
	at java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1142)
	at java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:617)
	at java.lang.Thread.run(Thread.java:748)
Caused by: java.net.URISyntaxException: Illegal character in path at index 138: file://pga.staging.scigap.org:/var/www/portals/gateway-user-data/seagrid/thejkane@iu.edu/AJ_Project/Gaussian_on_Jul_12_2019_1254_AM/Screen
Shot 2019-07-12 at 12.14.27 AM.png
	at java.net.URI$Parser.fail(URI.java:2848)
	at java.net.URI$Parser.checkChars(URI.java:3021)
	at java.net.URI$Parser.parseHierarchical(URI.java:3105)
	at java.net.URI$Parser.parse(URI.java:3053)
	at java.net.URI.<init>(URI.java:588)
	at org.apache.airavata.helix.impl.task.staging.InputDataStagingTask.onRun(InputDataStagingTask.java:83)
	... 10 more
{noformat}

The problem is the space in the file path: {{file://pga.staging.scigap.org:/var/www/portals/gateway-user-data/seagrid/thejkane@iu.edu/AJ_Project/Gaussian_on_Jul_12_2019_1254_AM/Screen
Shot 2019-07-12 at 12.14.27 AM.png}}


> Experiment failed with 'Failed to obtain source URI for input data staging task TASK_........'
> ----------------------------------------------------------------------------------------------
>
>                 Key: AIRAVATA-3118
>                 URL: https://issues.apache.org/jira/browse/AIRAVATA-3118
>             Project: Airavata
>          Issue Type: Sub-task
>          Components: Django Portal
>    Affects Versions: 0.18
>         Environment: https://django.staging.seagrid.org
>            Reporter: Eroma
>            Assignee: Marcus Christie
>            Priority: Major
>         Attachments: Screen Shot 2019-07-12 at 12.56.10 AM.png
>
>
> 1. Not sure why this error message is coming and experiment FAILED.
> 2. More importantly what should the user do for this?



--
This message was sent by Atlassian JIRA
(v7.6.14#76016)

Mime
View raw message