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From: Eric Kuyt <eric.kuijt@wur.nl>
Date: Thu, 17 Mar 2016 15:42:24 +0100
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 <CAJLbdigsNB+xp0Aeb_RmqkB1smVRX6RimgVYrNHQ1TKvX2bkgQ@mail.gmail.com>
Subject: Experiment not in completed.
To: <dev@airavata.apache.org>
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Hi All,

tomorrow i have some time to take look at airavata again.

Now I configured email in SGE this and made sure the mail is read I get
extra status info.

[INFO] expId: test_experiment_11_b078f237-c62e-4baf-8d5d-44bf1cd6df23,
processId: PROCESS_eab91edc-e919-4d4d-b8fc-36efb1c82ecf, taskId:
TASK_b33c3585-e605-410d-86b0-1238ce4ab28f, type: JOB_SUBMISSION:- Task
status changed COMPLETED -> COMPLETED
[INFO] Publishing status to rabbitmq...
[INFO] expId: test_experiment_11_b078f237-c62e-4baf-8d5d-44bf1cd6df23,
processId: PROCESS_eab91edc-e919-4d4d-b8fc-36efb1c82ecf :- Process status
changed EXECUTING -> MONITORING
[INFO] Publishing status to rabbitmq...
[INFO] expId: test_experiment_11_b078f237-c62e-4baf-8d5d-44bf1cd6df23,
processId: PROCESS_eab91edc-e919-4d4d-b8fc-36efb1c82ecf, taskId:
TASK_4513cb0c-c8ff-414a-b5b9-daf12040f478, type: MONITORING:- Task status
changed CREATED -> EXECUTING
[INFO] expId: test_experiment_11_b078f237-c62e-4baf-8d5d-44bf1cd6df23,
processId: PROCESS_eab91edc-e919-4d4d-b8fc-36efb1c82ecf :- Process status
changed event received for status MONITORING
[INFO] Publishing status to rabbitmq...
[INFO] [EJM]: Added monitor Id : 92 to email based monitor map
[INFO] Airavata retrieved project with project Id : default
[INFO] Airavata retrieved job models for experiment with experiment id :
test_experiment_11_b078f237-c62e-4baf-8d5d-44bf1cd6df23
[INFO] [EJM]: 1 job/s in job monitor map
[INFO] [EJM]: Retrieving unseen emails
[INFO] [EJM]: No new email messages
[INFO] Airavata retrieved project with project Id : default
[INFO] Airavata retrieved job models for experiment with experiment id :
test_experiment_11_b078f237-c62e-4baf-8d5d-44bf1cd6df23
[INFO] Airavata retrieved project with project Id : default
[INFO] Airavata retrieved job models for experiment with experiment id :
test_experiment_11_b078f237-c62e-4baf-8d5d-44bf1cd6df23
[INFO] [EJM]: 1 job/s in job monitor map
[INFO] [EJM]: Retrieving unseen emails
[INFO] Airavata retrieved project with project Id : default
[INFO] Airavata retrieved job models for experiment with experiment id :
test_experiment_11_b078f237-c62e-4baf-8d5d-44bf1cd6df23
[INFO] [EJM]: 2 new email/s received
[INFO] [EJM]: Job Active email received, JobName : A1753650831, JobId : 92
[INFO] [EJM]: Publishing status changes to amqp. JobName : A1753650831,
JobId : 92
[INFO] Publishing status to rabbitmq...
[INFO] [EJM]: Job Complete email received , removed job from job
monitoring. JobName : A1753650831, JobId : 92
[INFO] [EJM]: Publishing status changes to amqp. JobName : A1753650831,
JobId : 92
[INFO] Publishing status to rabbitmq...
[INFO] [EJM]: Calling Out Handler chain of JobName : A1753650831, JobId : 92
[INFO] expId: test_experiment_11_b078f237-c62e-4baf-8d5d-44bf1cd6df23,
processId: PROCESS_eab91edc-e919-4d4d-b8fc-36efb1c82ecf, taskId:
TASK_4513cb0c-c8ff-414a-b5b9-daf12040f478, type: MONITORING:- Task status
changed EXECUTING -> COMPLETED
[INFO] Publishing status to rabbitmq...

But the experiment, containing only one completed job keeps being at
executing state. Does anyone know why the experiment doesn't gi in
Completed state?


Thanks,

Eric

-- 
Central Veterinary Institute of Wageningen UR (CVI)
Department of Infection Biology
PO box 65, 8200 AB Lelystad, NL
Visiting address: ASG, Edelhertweg 15, 8219 PH Lelystad

Tel:  +31-(0)320-293391
Fax: +31-(0)320-238153
E-mail: eric.kuijt@wur.nl
Web: http://www.cvi.wur.nl

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<div dir=3D"ltr"><div class=3D"gmail_default" style=3D"font-family:verdana,=
sans-serif;color:rgb(68,68,68)">Hi All,</div><div class=3D"gmail_default" s=
tyle=3D"font-family:verdana,sans-serif;color:rgb(68,68,68)"><br></div><div =
class=3D"gmail_default" style=3D"font-family:verdana,sans-serif;color:rgb(6=
8,68,68)">tomorrow i have some time to take look at airavata again.</div><d=
iv class=3D"gmail_default" style=3D"font-family:verdana,sans-serif;color:rg=
b(68,68,68)"><br></div><div class=3D"gmail_default" style=3D"font-family:ve=
rdana,sans-serif;color:rgb(68,68,68)">Now I configured email in SGE this an=
d made sure the mail is read I get extra status info.</div><div class=3D"gm=
ail_default" style=3D"font-family:verdana,sans-serif;color:rgb(68,68,68)"><=
br></div><div class=3D"gmail_default" style=3D"font-family:verdana,sans-ser=
if;color:rgb(68,68,68)"><div class=3D"gmail_default">[INFO] expId: test_exp=
eriment_11_b078f237-c62e-4baf-8d5d-44bf1cd6df23, processId: PROCESS_eab91ed=
c-e919-4d4d-b8fc-36efb1c82ecf, taskId: TASK_b33c3585-e605-410d-86b0-1238ce4=
ab28f, type: JOB_SUBMISSION:- Task status changed COMPLETED -&gt; COMPLETED=
</div><div class=3D"gmail_default">[INFO] Publishing status to rabbitmq...<=
/div><div class=3D"gmail_default">[INFO] expId: test_experiment_11_b078f237=
-c62e-4baf-8d5d-44bf1cd6df23, processId: PROCESS_eab91edc-e919-4d4d-b8fc-36=
efb1c82ecf :- Process status changed EXECUTING -&gt; MONITORING</div><div c=
lass=3D"gmail_default">[INFO] Publishing status to rabbitmq...</div><div cl=
ass=3D"gmail_default">[INFO] expId: test_experiment_11_b078f237-c62e-4baf-8=
d5d-44bf1cd6df23, processId: PROCESS_eab91edc-e919-4d4d-b8fc-36efb1c82ecf, =
taskId: TASK_4513cb0c-c8ff-414a-b5b9-daf12040f478, type: MONITORING:- Task =
status changed CREATED -&gt; EXECUTING</div><div class=3D"gmail_default">[I=
NFO] expId: test_experiment_11_b078f237-c62e-4baf-8d5d-44bf1cd6df23, proces=
sId: PROCESS_eab91edc-e919-4d4d-b8fc-36efb1c82ecf :- Process status changed=
 event received for status MONITORING</div><div class=3D"gmail_default">[IN=
FO] Publishing status to rabbitmq...</div><div class=3D"gmail_default">[INF=
O] [EJM]: Added monitor Id : 92 to email based monitor map</div><div class=
=3D"gmail_default">[INFO] Airavata retrieved project with project Id : defa=
ult</div><div class=3D"gmail_default">[INFO] Airavata retrieved job models =
for experiment with experiment id : test_experiment_11_b078f237-c62e-4baf-8=
d5d-44bf1cd6df23</div><div class=3D"gmail_default">[INFO] [EJM]: 1 job/s in=
 job monitor map</div><div class=3D"gmail_default">[INFO] [EJM]: Retrieving=
 unseen emails</div><div class=3D"gmail_default">[INFO] [EJM]: No new email=
 messages</div><div class=3D"gmail_default">[INFO] Airavata retrieved proje=
ct with project Id : default</div><div class=3D"gmail_default">[INFO] Airav=
ata retrieved job models for experiment with experiment id : test_experimen=
t_11_b078f237-c62e-4baf-8d5d-44bf1cd6df23</div><div class=3D"gmail_default"=
>[INFO] Airavata retrieved project with project Id : default</div><div clas=
s=3D"gmail_default">[INFO] Airavata retrieved job models for experiment wit=
h experiment id : test_experiment_11_b078f237-c62e-4baf-8d5d-44bf1cd6df23</=
div><div class=3D"gmail_default">[INFO] [EJM]: 1 job/s in job monitor map</=
div><div class=3D"gmail_default">[INFO] [EJM]: Retrieving unseen emails</di=
v><div class=3D"gmail_default">[INFO] Airavata retrieved project with proje=
ct Id : default</div><div class=3D"gmail_default">[INFO] Airavata retrieved=
 job models for experiment with experiment id : test_experiment_11_b078f237=
-c62e-4baf-8d5d-44bf1cd6df23</div><div class=3D"gmail_default">[INFO] [EJM]=
: 2 new email/s received</div><div class=3D"gmail_default">[INFO] [EJM]: Jo=
b Active email received, JobName : A1753650831, JobId : 92</div><div class=
=3D"gmail_default">[INFO] [EJM]: Publishing status changes to amqp. JobName=
 : A1753650831, JobId : 92</div><div class=3D"gmail_default">[INFO] Publish=
ing status to rabbitmq...</div><div class=3D"gmail_default">[INFO] [EJM]: J=
ob Complete email received , removed job from job monitoring. JobName : A17=
53650831, JobId : 92</div><div class=3D"gmail_default">[INFO] [EJM]: Publis=
hing status changes to amqp. JobName : A1753650831, JobId : 92</div><div cl=
ass=3D"gmail_default">[INFO] Publishing status to rabbitmq...</div><div cla=
ss=3D"gmail_default">[INFO] [EJM]: Calling Out Handler chain of JobName : A=
1753650831, JobId : 92</div><div class=3D"gmail_default">[INFO] expId: test=
_experiment_11_b078f237-c62e-4baf-8d5d-44bf1cd6df23, processId: PROCESS_eab=
91edc-e919-4d4d-b8fc-36efb1c82ecf, taskId: TASK_4513cb0c-c8ff-414a-b5b9-daf=
12040f478, type: MONITORING:- Task status changed EXECUTING -&gt; COMPLETED=
</div><div class=3D"gmail_default">[INFO] Publishing status to rabbitmq...<=
/div><div><br></div><div>But the experiment, containing only one completed =
job keeps being at executing state. Does anyone know why the experiment doe=
sn&#39;t gi in Completed state?</div><div><br></div><div><br></div><div>Tha=
nks,</div><div><br></div><div>Eric=C2=A0</div></div><div><br></div>-- <br><=
div class=3D"gmail_signature"><div dir=3D"ltr">Central Veterinary Institute=
 of Wageningen UR (CVI)<br>Department of Infection Biology<br>PO box 65, 82=
00 AB Lelystad, NL<br>Visiting address: ASG, Edelhertweg 15, 8219 PH Lelyst=
ad<br>=C2=A0<br>Tel:=C2=A0 <a value=3D"+31320293391">+31-(0)320-293391</a><=
br>Fax: <a value=3D"+31320238153">+31-(0)320-238153</a><br>E-mail: <a href=
=3D"mailto:eric.kuijt@wur.nl" target=3D"_blank">eric.kuijt@wur.nl</a><br>We=
b:<a href=3D"http://www.cvi.wur.nl" target=3D"_blank"> http://www.cvi.wur.n=
l</a></div></div>
</div>

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