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From Suresh Marru <sma...@apache.org>
Subject Re: Permission error at submitting Gaussian jobs to Airavata
Date Mon, 17 Aug 2015 13:48:36 GMT
Hi Sudhakar,

Both PGA and command line invocation should use same account. But you are
right that scigap account is not added, I will get that fixed now.

Suresh

On Mon, Aug 17, 2015 at 8:48 AM Pamidighantam, Sudhakar V <
spamidig@illinois.edu> wrote:

> From PGA it may be going to ogce login on Comet and I noticed here it is
> using scigap login which does not appear to be in gaussian user group.
>
> Sudhakar.
>
> On Aug 17, 2015, at 6:41 AM, DImuthu Upeksha <dimuthu.upeksha2@gmail.com>
> wrote:
>
> Hi Sudhakar,
>
> I'm using my user 'dimuthu' to submit the job. However from PGA I was able
> to submit using same user.
>
> On Mon, Aug 17, 2015 at 4:34 PM, Pamidighantam, Sudhakar V <
> spamidig@illinois.edu> wrote:
>
>> Dimuthu:
>> Are you using ind123 for the account to submit the job on comet. Also
>> scigap user need to be added to gaussian group on comet for this gaussian
>> job to execute.
>>
>> Thanks,
>> Sudhakar.
>> On Aug 17, 2015, at 5:54 AM, DImuthu Upeksha <dimuthu.upeksha2@gmail.com>
>> wrote:
>>
>> Hi all,
>>
>> $subject please. What could be the reason for this? Hope the issue is
>> with this
>>
>> org.apache.airavata.gsi.ssh.impl.GSISSHAbstractCluster  - Standard Error
>> output : sbatch: error: bank_limit plugin: expired user, can't submit job
>>
>> Here is the full log
>> --------------------
>>
>> 2015-08-17 06:48:07,601 [Thread-9] INFO
>> org.apache.airavata.gfac.monitor.email.EmailBasedMonitor  - [EJM]: Job
>> Monitor Map is empty, no need to retrieve emails
>>
>> 2015-08-17 06:48:17,602 [Thread-9] INFO
>> org.apache.airavata.gfac.monitor.email.EmailBasedMonitor  - [EJM]: Job
>> Monitor Map is empty, no need to retrieve emails
>>
>> 2015-08-17 06:48:27,603 [Thread-9] INFO
>> org.apache.airavata.gfac.monitor.email.EmailBasedMonitor  - [EJM]: Job
>> Monitor Map is empty, no need to retrieve emails
>>
>> 2015-08-17 06:48:37,603 [Thread-9] INFO
>> org.apache.airavata.gfac.monitor.email.EmailBasedMonitor  - [EJM]: Job
>> Monitor Map is empty, no need to retrieve emails
>>
>> 2015-08-17 06:48:43,612 [pool-3-thread-3] INFO
>> org.apache.airavata.gfac.core.utils.GFacUtils  - This is a new Job, so
>> creating all the experiment docs from the scratch
>>
>> 2015-08-17 06:48:43,679 [pool-3-thread-3] INFO
>> org.apache.airavata.gfac.core.utils.GFacUtils  - Created the node:
>> /gfac-experiments/gfac-node0/dimuthu_experiment_gau_11_6e6ffc70-5dd2-4a9f-94b6-8cd6e672ec08/state
>> successfully !
>>
>> 2015-08-17 06:48:43,692 [pool-3-thread-3] INFO
>> org.apache.airavata.gfac.server.GfacServerHandler  -
>> -----------------------------------------------------92-----------------------------------------------------
>>
>> 2015-08-17 06:48:43,692 [pool-3-thread-3] INFO
>> org.apache.airavata.gfac.server.GfacServerHandler  -
>> Id:dimuthu_experiment_gau_11_6e6ffc70-5dd2-4a9f-94b6-8cd6e672ec08 : GFac
>> Received submit job request for the Experiment:
>> dimuthu_experiment_gau_11_6e6ffc70-5dd2-4a9f-94b6-8cd6e672ec08 TaskId:
>> tempNode_56f41083-10be-4161-8803-ee1106bd3f54
>>
>> 2015-08-17 06:48:44,595 [pool-8-thread-56] ERROR
>> org.apache.airavata.gfac.core.monitor.MonitorID  - There is not job created
>> at this point
>>
>> 2015-08-17 06:48:44,599 [pool-8-thread-56] INFO
>> org.apache.airavata.gfac.core.monitor.GfacInternalStatusUpdator  - Gfac
>> internal state changed to: ACCEPTED
>>
>> 2015-08-17 06:48:44,790 [pool-8-thread-56] ERROR
>> org.apache.airavata.gfac.core.monitor.MonitorID  - There is not job created
>> at this point
>>
>> 2015-08-17 06:48:44,790 [pool-8-thread-56] INFO
>> org.apache.airavata.gfac.core.monitor.GfacInternalStatusUpdator  - Gfac
>> internal state changed to: INHANDLERSINVOKING
>>
>> 2015-08-17 06:48:44,882 [pool-8-thread-56] INFO
>> org.apache.airavata.gfac.core.handler.AppDescriptorCheckHandler  - Invoking
>> ApplicationDescriptorCheckHandler ...
>>
>> 2015-08-17 06:48:44,905 [pool-8-thread-56] INFO
>> org.apache.airavata.gfac.core.handler.AppDescriptorCheckHandler  -
>> Recoverable data is saving to zk:
>> /oasis/scratch/comet/scigap/temp_project/airavata-workdirs,/oasis/scratch/comet/scigap/temp_project/airavata-workdirs/dimuthu_experiment_gau_11_6e6ffc70-5dd2-4a9f-94b6-8cd6e672ec08,/oasis/scratch/comet/scigap/temp_project/airavata-workdirs/dimuthu_experiment_gau_11_6e6ffc70-5dd2-4a9f-94b6-8cd6e672ec08,/oasis/scratch/comet/scigap/temp_project/airavata-workdirs/dimuthu_experiment_gau_11_6e6ffc70-5dd2-4a9f-94b6-8cd6e672ec08,/oasis/scratch/comet/scigap/temp_project/airavata-workdirs/dimuthu_experiment_gau_11_6e6ffc70-5dd2-4a9f-94b6-8cd6e672ec08/Gaussian.stdout,/oasis/scratch/comet/scigap/temp_project/airavata-workdirs/dimuthu_experiment_gau_11_6e6ffc70-5dd2-4a9f-94b6-8cd6e672ec08/Gaussian.stderr
>>
>> 2015-08-17 06:48:45,216 [pool-8-thread-56] INFO
>> org.apache.airavata.gsi.ssh.impl.GSISSHAbstractCluster  - Listing
>> directory: comet.sdsc.edu
>> <https://urldefense.proofpoint.com/v2/url?u=http-3A__comet.sdsc.edu&d=AwMFaQ&c=8hUWFZcy2Z-Za5rBPlktOQ&r=7_-LbDwTKOoIiO4P4OLfUTX6lSdjys9jh2AJ7sBl9ag&m=FGL6ZmI_OkpYj1Eni_XxKlZi1e5pQjBPe9kPjA2WSZg&s=545Z-EukzmpIvn6p78NWm6KsDNSiogQ7fygwv1S2Kn0&e=>
>> :~/
>>
>> 2015-08-17 06:48:45,424 [pool-8-thread-56] INFO
>> org.apache.airavata.gfac.ssh.util.GFACSSHUtils  - Re-using the same
>> connection used with the connection string:scigapcomet.sdsc.edu22
>>
>> 2015-08-17 06:48:45,424 [pool-8-thread-56] INFO
>> org.apache.airavata.gfac.ssh.handler.SSHDirectorySetupHandler  - Setup SSH
>> job directorties
>>
>> 2015-08-17 06:48:45,441 [pool-8-thread-56] INFO
>> org.apache.airavata.gfac.ssh.handler.SSHDirectorySetupHandler  -
>> Successfully retrieved the Security Context
>>
>> 2015-08-17 06:48:45,441 [pool-8-thread-56] INFO
>> org.apache.airavata.gsi.ssh.impl.GSISSHAbstractCluster  - Creating
>> directory: comet.sdsc.edu
>> <https://urldefense.proofpoint.com/v2/url?u=http-3A__comet.sdsc.edu&d=AwMFaQ&c=8hUWFZcy2Z-Za5rBPlktOQ&r=7_-LbDwTKOoIiO4P4OLfUTX6lSdjys9jh2AJ7sBl9ag&m=FGL6ZmI_OkpYj1Eni_XxKlZi1e5pQjBPe9kPjA2WSZg&s=545Z-EukzmpIvn6p78NWm6KsDNSiogQ7fygwv1S2Kn0&e=>
>> :/oasis/scratch/comet/scigap/temp_project/airavata-workdirs/dimuthu_experiment_gau_11_6e6ffc70-5dd2-4a9f-94b6-8cd6e672ec08
>>
>> 2015-08-17 06:48:45,924 [pool-8-thread-56] ERROR
>> org.apache.airavata.gfac.ssh.handler.AdvancedSCPInputHandler  - Previously
>> stored data  is wrong so we continue the operations
>>
>> 2015-08-17 06:48:46,251 [pool-8-thread-56] INFO
>> org.apache.airavata.gsi.ssh.impl.GSISSHAbstractCluster  - Transfering
>> from:localhost:/home/airavata/oodt/archive/ghqcgrdl57hmhbhd37p11qqjnl/c4b4nhtwbs3.inp
>> To:file://home/airavata/inputData/dimuthu_experiment_gau_11_6e6ffc70-5dd2-4a9f-94b6-8cd6e672ec08/tempNode_56f41083-10be-4161-8803-ee1106bd3f54
>>
>> 2015-08-17 06:48:47,604 [Thread-9] INFO
>> org.apache.airavata.gfac.monitor.email.EmailBasedMonitor  - [EJM]: Job
>> Monitor Map is empty, no need to retrieve emails
>>
>> 2015-08-17 06:48:48,263 [pool-8-thread-56] INFO
>> org.apache.airavata.gfac.ssh.handler.SSHInputHandler  - Successfully
>> retrieved the Security Context
>>
>> 2015-08-17 06:48:48,265 [pool-8-thread-56] INFO
>> org.apache.airavata.gfac.ssh.handler.SSHInputHandler  - Invoking
>> SCPInputHandler
>>
>> 2015-08-17 06:48:48,333 [pool-8-thread-56] INFO
>> org.apache.airavata.gsi.ssh.impl.GSISSHAbstractCluster  - Transfering
>> file:////home/airavata/inputData/dimuthu_experiment_gau_11_6e6ffc70-5dd2-4a9f-94b6-8cd6e672ec08/tempNode_56f41083-10be-4161-8803-ee1106bd3f54/c4b4nhtwbs3.inp
>> To:comet.sdsc.edu:
>> /oasis/scratch/comet/scigap/temp_project/airavata-workdirs/dimuthu_experiment_gau_11_6e6ffc70-5dd2-4a9f-94b6-8cd6e672ec08/c4b4nhtwbs3.inp
>>
>> 2015-08-17 06:48:49,125 [pool-8-thread-56] ERROR
>> org.apache.airavata.gfac.core.monitor.MonitorID  - There is not job created
>> at this point
>>
>> 2015-08-17 06:48:49,125 [pool-8-thread-56] INFO
>> org.apache.airavata.gfac.core.monitor.GfacInternalStatusUpdator  - Gfac
>> internal state changed to: INHANDLERSINVOKED
>>
>> 2015-08-17 06:48:49,199 [pool-8-thread-56] ERROR
>> org.apache.airavata.gfac.core.monitor.MonitorID  - There is not job created
>> at this point
>>
>> 2015-08-17 06:48:49,200 [pool-8-thread-56] INFO
>> org.apache.airavata.gfac.core.monitor.GfacInternalStatusUpdator  - Gfac
>> internal state changed to: PROVIDERINVOKING
>>
>> 2015-08-17 06:48:49,299 [pool-8-thread-56] INFO
>> org.apache.airavata.gfac.ssh.provider.impl.SSHProvider  - Successfully
>> retrieved the Security Context
>>
>> 2015-08-17 06:48:49,346 [pool-8-thread-56] INFO
>> org.apache.airavata.gfac.ssh.util.GFACSSHUtils  - Email list:
>> gw77jobs@scigap.org,jobnotif@scigap.org
>>
>> 2015-08-17 06:48:49,363 [pool-8-thread-56] INFO
>> org.apache.airavata.gfac.ssh.provider.impl.SSHProvider  - <ns:JobDescriptor
>> xmlns:ns="http://airavata.apache.org/gsi/ssh/2012/12
>> <https://urldefense.proofpoint.com/v2/url?u=http-3A__airavata.apache.org_gsi_ssh_2012_12&d=AwMFaQ&c=8hUWFZcy2Z-Za5rBPlktOQ&r=7_-LbDwTKOoIiO4P4OLfUTX6lSdjys9jh2AJ7sBl9ag&m=rr-z-ofxHOEMNG0MplQ8-M4XnN4pik8WDj_QJtcJ1U4&s=-aj1AS2SM5acUrfV-jrQm_cHOdFuAZPHPxrR8EvElg8&e=>
>> "><ns:userName>scigap</ns:userName><ns:shellName>/bin/bash</ns:shellName><ns:queueName>compute</ns:queueName><ns:jobName>A516147113</ns:jobName><ns:allEnvExport>true</ns:allEnvExport><ns:mailOptions>abe</ns:mailOptions><ns:mailAddress>
>> gw77jobs@scigap.org,jobnotif@scigap.org</ns:mailAddress><ns:acountString>sds128</ns:acountString><ns:maxWallTime>00:30:00</ns:maxWallTime><ns:standardOutFile>/oasis/scratch/comet/scigap/temp_project/airavata-workdirs/dimuthu_experiment_gau_11_6e6ffc70-5dd2-4a9f-94b6-8cd6e672ec08/Gaussian.stdout</ns:standardOutFile><ns:standardErrorFile>/oasis/scratch/comet/scigap/temp_project/airavata-workdirs/dimuthu_experiment_gau_11_6e6ffc70-5dd2-4a9f-94b6-8cd6e672ec08/Gaussian.stderr</ns:standardErrorFile><ns:outputDirectory>/oasis/scratch/comet/scigap/temp_project/airavata-workdirs/dimuthu_experiment_gau_11_6e6ffc70-5dd2-4a9f-94b6-8cd6e672ec08</ns:outputDirectory><ns:inputDirectory>/oasis/scratch/comet/scigap/temp_project/airavata-workdirs/dimuthu_experiment_gau_11_6e6ffc70-5dd2-4a9f-94b6-8cd6e672ec08</ns:inputDirectory><ns:nodes>1</ns:nodes><ns:processesPerNode>16</ns:processesPerNode><ns:cpuCount>16</ns:cpuCount><ns:workingDirectory>/oasis/scratch/comet/scigap/temp_project/airavata-workdirs/dimuthu_experiment_gau_11_6e6ffc70-5dd2-4a9f-94b6-8cd6e672ec08</ns:workingDirectory><ns:executablePath>/opt/gaussian/g09/g09</ns:executablePath><ns:inputs><ns:input>gaussian.out</ns:input></ns:inputs><ns:owner>scigap</ns:owner><ns:usedMem>100</ns:usedMem><ns:moduleLoadCommands><ns:command>module
>> load
>> gaussian</ns:command></ns:moduleLoadCommands><ns:callBackIp>149.165.228.42</ns:callBackIp><ns:callBackPort>8950</ns:callBackPort></ns:JobDescriptor>
>>
>> 2015-08-17 06:48:49,443 [pool-8-thread-56] INFO
>> org.apache.airavata.gsi.ssh.impl.GSISSHAbstractCluster  - Transfering
>> file://home/airavata/production-deployment/gfac-instance1/apache-airavata-server-0.15-SNAPSHOT/bin/1029102677.slurm
>> To:comet.sdsc.edu:
>> /oasis/scratch/comet/scigap/temp_project/airavata-workdirs/dimuthu_experiment_gau_11_6e6ffc70-5dd2-4a9f-94b6-8cd6e672ec08
>>
>> 2015-08-17 06:48:49,897 [pool-8-thread-56] INFO
>> org.apache.airavata.gsi.ssh.impl.GSISSHAbstractCluster  - Executing
>> RawCommand : /usr/bin/sbatch
>> /oasis/scratch/comet/scigap/temp_project/airavata-workdirs/dimuthu_experiment_gau_11_6e6ffc70-5dd2-4a9f-94b6-8cd6e672ec08/1029102677.slurm
>>
>> 2015-08-17 06:48:50,195 [pool-8-thread-56] INFO
>> org.apache.airavata.gsi.ssh.impl.GSISSHAbstractCluster  - StandardOutput
>> Returned:
>>
>> 2015-08-17 06:48:50,196 [pool-8-thread-56] INFO
>> org.apache.airavata.gsi.ssh.impl.GSISSHAbstractCluster  - StandardError
>> Returned:sbatch: error: bank_limit plugin: expired user, can't submit job
>>
>> sbatch: error: Batch job submission failed: Invalid account or
>> account/partition combination specified
>>
>>
>> 2015-08-17 06:48:50,196 [pool-8-thread-56] ERROR
>> org.apache.airavata.gsi.ssh.impl.GSISSHAbstractCluster  - Standard Error
>> output : sbatch: error: bank_limit plugin: expired user, can't submit job
>>
>> sbatch: error: Batch job submission failed: Invalid account or
>> account/partition combination specified
>>
>>
>> 2015-08-17 06:48:55,197 [pool-8-thread-56] ERROR
>> org.apache.airavata.gsi.ssh.impl.GSISSHAbstractCluster  - Error occured
>> during job submission but doing a retry
>>
>> 2015-08-17 06:48:55,197 [pool-8-thread-56] INFO
>> org.apache.airavata.gsi.ssh.impl.GSISSHAbstractCluster  - Transfering
>> file://home/airavata/production-deployment/gfac-instance1/apache-airavata-server-0.15-SNAPSHOT/bin/1029102677.slurm
>> To:comet.sdsc.edu:
>> /oasis/scratch/comet/scigap/temp_project/airavata-workdirs/dimuthu_experiment_gau_11_6e6ffc70-5dd2-4a9f-94b6-8cd6e672ec08
>>
>> 2015-08-17 06:48:55,641 [pool-8-thread-56] INFO
>> org.apache.airavata.gsi.ssh.impl.GSISSHAbstractCluster  - Executing
>> RawCommand : /usr/bin/sbatch
>> /oasis/scratch/comet/scigap/temp_project/airavata-workdirs/dimuthu_experiment_gau_11_6e6ffc70-5dd2-4a9f-94b6-8cd6e672ec08/1029102677.slurm
>>
>> 2015-08-17 06:48:55,905 [pool-8-thread-56] INFO
>> org.apache.airavata.gsi.ssh.impl.GSISSHAbstractCluster  - StandardOutput
>> Returned:
>>
>> 2015-08-17 06:48:55,905 [pool-8-thread-56] INFO
>> org.apache.airavata.gsi.ssh.impl.GSISSHAbstractCluster  - StandardError
>> Returned:sbatch: error: bank_limit plugin: expired user, can't submit job
>>
>> sbatch: error: Batch job submission failed: Invalid account or
>> account/partition combination specified
>>
>>
>> 2015-08-17 06:48:55,905 [pool-8-thread-56] ERROR
>> org.apache.airavata.gsi.ssh.impl.GSISSHAbstractCluster  - Standard Error
>> output : sbatch: error: bank_limit plugin: expired user, can't submit job
>>
>> sbatch: error: Batch job submission failed: Invalid account or
>> account/partition combination specified
>>
>>
>> 2015-08-17 06:48:57,612 [Thread-9] INFO
>> org.apache.airavata.gfac.monitor.email.EmailBasedMonitor  - [EJM]: Job
>> Monitor Map is empty, no need to retrieve emails
>>
>> 2015-08-17 06:49:00,906 [pool-8-thread-56] ERROR
>> org.apache.airavata.gsi.ssh.impl.GSISSHAbstractCluster  - Error occured
>> during job submission but doing a retry
>>
>> 2015-08-17 06:49:00,906 [pool-8-thread-56] INFO
>> org.apache.airavata.gsi.ssh.impl.GSISSHAbstractCluster  - Transfering
>> file://home/airavata/production-deployment/gfac-instance1/apache-airavata-server-0.15-SNAPSHOT/bin/1029102677.slurm
>> To:comet.sdsc.edu:
>> /oasis/scratch/comet/scigap/temp_project/airavata-workdirs/dimuthu_experiment_gau_11_6e6ffc70-5dd2-4a9f-94b6-8cd6e672ec08
>>
>> 2015-08-17 06:49:01,321 [pool-8-thread-56] INFO
>> org.apache.airavata.gsi.ssh.impl.GSISSHAbstractCluster  - Executing
>> RawCommand : /usr/bin/sbatch
>> /oasis/scratch/comet/scigap/temp_project/airavata-workdirs/dimuthu_experiment_gau_11_6e6ffc70-5dd2-4a9f-94b6-8cd6e672ec08/1029102677.slurm
>>
>> 2015-08-17 06:49:01,587 [pool-8-thread-56] INFO
>> org.apache.airavata.gsi.ssh.impl.GSISSHAbstractCluster  - StandardOutput
>> Returned:
>>
>> 2015-08-17 06:49:01,587 [pool-8-thread-56] INFO
>> org.apache.airavata.gsi.ssh.impl.GSISSHAbstractCluster  - StandardError
>> Returned:sbatch: error: bank_limit plugin: expired user, can't submit job
>>
>> sbatch: error: Batch job submission failed: Invalid account or
>> account/partition combination specified
>>
>>
>> 2015-08-17 06:49:01,587 [pool-8-thread-56] ERROR
>> org.apache.airavata.gsi.ssh.impl.GSISSHAbstractCluster  - Standard Error
>> output : sbatch: error: bank_limit plugin: expired user, can't submit job
>>
>> sbatch: error: Batch job submission failed: Invalid account or
>> account/partition combination specified
>>
>>
>> 2015-08-17 06:49:01,588 [pool-8-thread-56] ERROR
>> org.apache.airavata.gfac.ssh.provider.impl.SSHProvider  - Error submitting
>> the job to host comet.sdsc.edu
>> <https://urldefense.proofpoint.com/v2/url?u=http-3A__comet.sdsc.edu&d=AwMFaQ&c=8hUWFZcy2Z-Za5rBPlktOQ&r=7_-LbDwTKOoIiO4P4OLfUTX6lSdjys9jh2AJ7sBl9ag&m=rr-z-ofxHOEMNG0MplQ8-M4XnN4pik8WDj_QJtcJ1U4&s=65JBaWpTv_6htucIuDqljdmiFGZnXKM4TYs8aVWQ9hM&e=>
>> message: Error reading output of job submission
>>
>>  StandardOutput:
>>
>>  StandardError: sbatch: error: bank_limit plugin: expired user, can't
>> submit job
>>
>> sbatch: error: Batch job submission failed: Invalid account or
>> account/partition combination specified
>>
>>
>> 2015-08-17 06:49:01,660 [pool-8-thread-56] ERROR
>> org.apache.airavata.persistance.registry.jpa.resources.JobDetailResource  -
>> The transaction has been rolled back.  See the nested exceptions for
>> details on the errors that occurred.
>>
>> <openjpa-2.2.0-r422266:1244990 fatal store error>
>> org.apache.openjpa.persistence.RollbackException: The transaction has been
>> rolled back.  See the nested exceptions for details on the errors that
>> occurred.
>>
>> FailedObject:
>> org.apache.airavata.persistance.registry.jpa.model.JobDetail@6f1d32ff
>>
>> at
>> org.apache.openjpa.persistence.EntityManagerImpl.commit(EntityManagerImpl.java:594)
>>
>> at
>> org.apache.airavata.persistance.registry.jpa.resources.JobDetailResource.save(JobDetailResource.java:308)
>>
>> at
>> org.apache.airavata.persistance.registry.jpa.impl.ExperimentRegistry.addJobDetails(ExperimentRegistry.java:1203)
>>
>> at
>> org.apache.airavata.persistance.registry.jpa.impl.RegistryImpl.add(RegistryImpl.java:157)
>>
>> at
>> org.apache.airavata.gfac.core.utils.GFacUtils.saveJobStatus(GFacUtils.java:232)
>>
>> at
>> org.apache.airavata.gfac.ssh.provider.impl.SSHProvider.execute(SSHProvider.java:215)
>>
>> at
>> org.apache.airavata.gfac.core.cpi.BetterGfacImpl.executeProvider(BetterGfacImpl.java:842)
>>
>> at
>> org.apache.airavata.gfac.core.cpi.BetterGfacImpl.invokeProviderExecute(BetterGfacImpl.java:753)
>>
>> at
>> org.apache.airavata.gfac.core.cpi.BetterGfacImpl.launch(BetterGfacImpl.java:703)
>>
>> at
>> org.apache.airavata.gfac.core.cpi.BetterGfacImpl.submitJob(BetterGfacImpl.java:492)
>>
>> at
>> org.apache.airavata.gfac.core.cpi.BetterGfacImpl.submitJob(BetterGfacImpl.java:183)
>>
>> at
>> org.apache.airavata.gfac.core.utils.InputHandlerWorker.run(InputHandlerWorker.java:47)
>>
>> at
>> java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1142)
>>
>> at
>> java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:617)
>>
>> at java.lang.Thread.run(Thread.java:745)
>>
>> Caused by: <openjpa-2.2.0-r422266:1244990 fatal store error>
>> org.apache.openjpa.persistence.EntityExistsException: The transaction has
>> been rolled back.  See the nested exceptions for details on the errors that
>> occurred.
>>
>> FailedObject:
>> org.apache.airavata.persistance.registry.jpa.model.JobDetail@6f1d32ff
>>
>> at
>> org.apache.openjpa.kernel.BrokerImpl.newFlushException(BrokerImpl.java:2337)
>>
>> at org.apache.openjpa.kernel.BrokerImpl.flush(BrokerImpl.java:2174)
>>
>> at org.apache.openjpa.kernel.BrokerImpl.flushSafe(BrokerImpl.java:2072)
>>
>> at
>> org.apache.openjpa.kernel.BrokerImpl.beforeCompletion(BrokerImpl.java:1990)
>>
>> at
>> org.apache.openjpa.kernel.LocalManagedRuntime.commit(LocalManagedRuntime.java:81)
>>
>> at org.apache.openjpa.kernel.BrokerImpl.commit(BrokerImpl.java:1514)
>>
>> at
>> org.apache.openjpa.kernel.DelegatingBroker.commit(DelegatingBroker.java:933)
>>
>> at
>> org.apache.openjpa.persistence.EntityManagerImpl.commit(EntityManagerImpl.java:570)
>>
>> ... 14 more
>>
>> Caused by: <openjpa-2.2.0-r422266:1244990 fatal store error>
>> org.apache.openjpa.persistence.EntityExistsException: Column
>> 'JOB_DESCRIPTION' cannot be null {prepstmnt 1744538295
>>
>> INSERT INTO JOB_DETAIL (JOB_ID, TASK_ID, COMPUTE_RESOURCE_CONSUMED,
>>
>>         CREATION_TIME, JOB_DESCRIPTION, JOBNAME, WORKING_DIR)
>>
>>     VALUES (?, ?, ?, ?, ?, ?, ?)
>>
>> [params=(String) none, (String)
>> tempNode_56f41083-10be-4161-8803-ee1106bd3f54, (null) null, (Timestamp)
>> 2015-08-17 06:49:01.613, (null) null, (String) A516147113, (null) null]}
>> [code=1048, state=23000]
>>
>> FailedObject:
>> org.apache.airavata.persistance.registry.jpa.model.JobDetail@6f1d32ff
>>
>> at org.apache.openjpa.jdbc.sql.DBDictionary.narrow(DBDictionary.java:4903)
>>
>> at
>> org.apache.openjpa.jdbc.sql.DBDictionary.newStoreException(DBDictionary.java:4878)
>>
>> at
>> org.apache.openjpa.jdbc.sql.SQLExceptions.getStore(SQLExceptions.java:136)
>>
>> at
>> org.apache.openjpa.jdbc.sql.SQLExceptions.getStore(SQLExceptions.java:78)
>>
>> at
>> org.apache.openjpa.jdbc.kernel.PreparedStatementManagerImpl.flushAndUpdate(PreparedStatementManagerImpl.java:143)
>>
>> at
>> org.apache.openjpa.jdbc.kernel.BatchingPreparedStatementManagerImpl.flushAndUpdate(BatchingPreparedStatementManagerImpl.java:79)
>>
>> at
>> org.apache.openjpa.jdbc.kernel.PreparedStatementManagerImpl.flushInternal(PreparedStatementManagerImpl.java:99)
>>
>> at
>> org.apache.openjpa.jdbc.kernel.PreparedStatementManagerImpl.flush(PreparedStatementManagerImpl.java:87)
>>
>> at
>> org.apache.openjpa.jdbc.kernel.ConstraintUpdateManager.flush(ConstraintUpdateManager.java:550)
>>
>> at
>> org.apache.openjpa.jdbc.kernel.ConstraintUpdateManager.flush(ConstraintUpdateManager.java:106)
>>
>> at
>> org.apache.openjpa.jdbc.kernel.BatchingConstraintUpdateManager.flush(BatchingConstraintUpdateManager.java:59)
>>
>> at
>> org.apache.openjpa.jdbc.kernel.AbstractUpdateManager.flush(AbstractUpdateManager.java:103)
>>
>> at
>> org.apache.openjpa.jdbc.kernel.AbstractUpdateManager.flush(AbstractUpdateManager.java:76)
>>
>> at
>> org.apache.openjpa.jdbc.kernel.JDBCStoreManager.flush(JDBCStoreManager.java:713)
>>
>> at
>> org.apache.openjpa.kernel.DelegatingStoreManager.flush(DelegatingStoreManager.java:131)
>>
>> ... 21 more
>>
>> Caused by: org.apache.openjpa.lib.jdbc.ReportingSQLException: Column
>> 'JOB_DESCRIPTION' cannot be null {prepstmnt 1744538295
>>
>> INSERT INTO JOB_DETAIL (JOB_ID, TASK_ID, COMPUTE_RESOURCE_CONSUMED,
>>
>>         CREATION_TIME, JOB_DESCRIPTION, JOBNAME, WORKING_DIR)
>>
>>     VALUES (?, ?, ?, ?, ?, ?, ?)
>>
>> [params=(String) none, (String)
>> tempNode_56f41083-10be-4161-8803-ee1106bd3f54, (null) null, (Timestamp)
>> 2015-08-17 06:49:01.613, (null) null, (String) A516147113, (null) null]}
>> [code=1048, state=23000]
>>
>> at
>> org.apache.openjpa.lib.jdbc.LoggingConnectionDecorator.wrap(LoggingConnectionDecorator.java:247)
>>
>> at
>> org.apache.openjpa.lib.jdbc.LoggingConnectionDecorator.wrap(LoggingConnectionDecorator.java:223)
>>
>> at
>> org.apache.openjpa.lib.jdbc.LoggingConnectionDecorator.access$1000(LoggingConnectionDecorator.java:72)
>>
>> at
>> org.apache.openjpa.lib.jdbc.LoggingConnectionDecorator$LoggingConnection$LoggingPreparedStatement.executeUpdate(LoggingConnectionDecorator.java:1162)
>>
>> at
>> org.apache.openjpa.lib.jdbc.DelegatingPreparedStatement.executeUpdate(DelegatingPreparedStatement.java:272)
>>
>> at
>> org.apache.openjpa.jdbc.kernel.JDBCStoreManager$CancelPreparedStatement.executeUpdate(JDBCStoreManager.java:1741)
>>
>> at
>> org.apache.openjpa.jdbc.kernel.PreparedStatementManagerImpl.executeUpdate(PreparedStatementManagerImpl.java:267)
>>
>> at
>> org.apache.openjpa.jdbc.kernel.PreparedStatementManagerImpl.flushAndUpdate(PreparedStatementManagerImpl.java:118)
>>
>> ... 31 more
>>
>> 2015-08-17 06:49:01,664 [pool-8-thread-56] ERROR
>> org.apache.airavata.persistance.registry.jpa.impl.ExperimentRegistry  -
>> Error while adding job details...
>>
>> org.apache.airavata.registry.cpi.RegistryException:
>> <openjpa-2.2.0-r422266:1244990 fatal store error>
>> org.apache.openjpa.persistence.RollbackException: The transaction has been
>> rolled back.  See the nested exceptions for details on the errors that
>> occurred.
>>
>> FailedObject:
>> org.apache.airavata.persistance.registry.jpa.model.JobDetail@6f1d32ff
>>
>> at
>> org.apache.airavata.persistance.registry.jpa.resources.JobDetailResource.save(JobDetailResource.java:312)
>>
>> at
>> org.apache.airavata.persistance.registry.jpa.impl.ExperimentRegistry.addJobDetails(ExperimentRegistry.java:1203)
>>
>> at
>> org.apache.airavata.persistance.registry.jpa.impl.RegistryImpl.add(RegistryImpl.java:157)
>>
>> at
>> org.apache.airavata.gfac.core.utils.GFacUtils.saveJobStatus(GFacUtils.java:232)
>>
>> at
>> org.apache.airavata.gfac.ssh.provider.impl.SSHProvider.execute(SSHProvider.java:215)
>>
>> at
>> org.apache.airavata.gfac.core.cpi.BetterGfacImpl.executeProvider(BetterGfacImpl.java:842)
>>
>> at
>> org.apache.airavata.gfac.core.cpi.BetterGfacImpl.invokeProviderExecute(BetterGfacImpl.java:753)
>>
>> at
>> org.apache.airavata.gfac.core.cpi.BetterGfacImpl.launch(BetterGfacImpl.java:703)
>>
>> at
>> org.apache.airavata.gfac.core.cpi.BetterGfacImpl.submitJob(BetterGfacImpl.java:492)
>>
>> at
>> org.apache.airavata.gfac.core.cpi.BetterGfacImpl.submitJob(BetterGfacImpl.java:183)
>>
>> at
>> org.apache.airavata.gfac.core.utils.InputHandlerWorker.run(InputHandlerWorker.java:47)
>>
>> at
>> java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1142)
>>
>> at
>> java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:617)
>>
>> at java.lang.Thread.run(Thread.java:745)
>>
>> Caused by: <openjpa-2.2.0-r422266:1244990 fatal store error>
>> org.apache.openjpa.persistence.RollbackException: The transaction has been
>> rolled back.  See the nested exceptions for details on the errors that
>> occurred.
>>
>> FailedObject:
>> org.apache.airavata.persistance.registry.jpa.model.JobDetail@6f1d32ff
>>
>> at
>> org.apache.openjpa.persistence.EntityManagerImpl.commit(EntityManagerImpl.java:594)
>>
>> at
>> org.apache.airavata.persistance.registry.jpa.resources.JobDetailResource.save(JobDetailResource.java:308)
>>
>> ... 13 more
>>
>> Caused by: <openjpa-2.2.0-r422266:1244990 fatal store error>
>> org.apache.openjpa.persistence.EntityExistsException: The transaction has
>> been rolled back.  See the nested exceptions for details on the errors that
>> occurred.
>>
>> FailedObject:
>> org.apache.airavata.persistance.registry.jpa.model.JobDetail@6f1d32ff
>>
>> at
>> org.apache.openjpa.kernel.BrokerImpl.newFlushException(BrokerImpl.java:2337)
>>
>> at org.apache.openjpa.kernel.BrokerImpl.flush(BrokerImpl.java:2174)
>>
>> at org.apache.openjpa.kernel.BrokerImpl.flushSafe(BrokerImpl.java:2072)
>>
>> at
>> org.apache.openjpa.kernel.BrokerImpl.beforeCompletion(BrokerImpl.java:1990)
>>
>> at
>> org.apache.openjpa.kernel.LocalManagedRuntime.commit(LocalManagedRuntime.java:81)
>>
>> at org.apache.openjpa.kernel.BrokerImpl.commit(BrokerImpl.java:1514)
>>
>> at
>> org.apache.openjpa.kernel.DelegatingBroker.commit(DelegatingBroker.java:933)
>>
>> at
>> org.apache.openjpa.persistence.EntityManagerImpl.commit(EntityManagerImpl.java:570)
>>
>> ... 14 more
>>
>> Caused by: <openjpa-2.2.0-r422266:1244990 fatal store error>
>> org.apache.openjpa.persistence.EntityExistsException: Column
>> 'JOB_DESCRIPTION' cannot be null {prepstmnt 1744538295
>>
>> INSERT INTO JOB_DETAIL (JOB_ID, TASK_ID, COMPUTE_RESOURCE_CONSUMED,
>>
>>         CREATION_TIME, JOB_DESCRIPTION, JOBNAME, WORKING_DIR)
>>
>>     VALUES (?, ?, ?, ?, ?, ?, ?)
>>
>> [params=(String) none, (String)
>> tempNode_56f41083-10be-4161-8803-ee1106bd3f54, (null) null, (Timestamp)
>> 2015-08-17 06:49:01.613, (null) null, (String) A516147113, (null) null]}
>> [code=1048, state=23000]
>>
>> FailedObject:
>> org.apache.airavata.persistance.registry.jpa.model.JobDetail@6f1d32ff
>>
>> at org.apache.openjpa.jdbc.sql.DBDictionary.narrow(DBDictionary.java:4903)
>>
>> at
>> org.apache.openjpa.jdbc.sql.DBDictionary.newStoreException(DBDictionary.java:4878)
>>
>> at
>> org.apache.openjpa.jdbc.sql.SQLExceptions.getStore(SQLExceptions.java:136)
>>
>> at
>> org.apache.openjpa.jdbc.sql.SQLExceptions.getStore(SQLExceptions.java:78)
>>
>> at
>> org.apache.openjpa.jdbc.kernel.PreparedStatementManagerImpl.flushAndUpdate(PreparedStatementManagerImpl.java:143)
>>
>> at
>> org.apache.openjpa.jdbc.kernel.BatchingPreparedStatementManagerImpl.flushAndUpdate(BatchingPreparedStatementManagerImpl.java:79)
>>
>> at
>> org.apache.openjpa.jdbc.kernel.PreparedStatementManagerImpl.flushInternal(PreparedStatementManagerImpl.java:99)
>>
>> at
>> org.apache.openjpa.jdbc.kernel.PreparedStatementManagerImpl.flush(PreparedStatementManagerImpl.java:87)
>>
>> at
>> org.apache.openjpa.jdbc.kernel.ConstraintUpdateManager.flush(ConstraintUpdateManager.java:550)
>>
>> at
>> org.apache.openjpa.jdbc.kernel.ConstraintUpdateManager.flush(ConstraintUpdateManager.java:106)
>>
>> at
>> org.apache.openjpa.jdbc.kernel.BatchingConstraintUpdateManager.flush(BatchingConstraintUpdateManager.java:59)
>>
>> at
>> org.apache.openjpa.jdbc.kernel.AbstractUpdateManager.flush(AbstractUpdateManager.java:103)
>>
>> at
>> org.apache.openjpa.jdbc.kernel.AbstractUpdateManager.flush(AbstractUpdateManager.java:76)
>>
>> at
>> org.apache.openjpa.jdbc.kernel.JDBCStoreManager.flush(JDBCStoreManager.java:713)
>>
>> at
>> org.apache.openjpa.kernel.DelegatingStoreManager.flush(DelegatingStoreManager.java:131)
>>
>> ... 21 more
>>
>> Caused by: org.apache.openjpa.lib.jdbc.ReportingSQLException: Column
>> 'JOB_DESCRIPTION' cannot be null {prepstmnt 1744538295
>>
>> INSERT INTO JOB_DETAIL (JOB_ID, TASK_ID, COMPUTE_RESOURCE_CONSUMED,
>>
>>         CREATION_TIME, JOB_DESCRIPTION, JOBNAME, WORKING_DIR)
>>
>>     VALUES (?, ?, ?, ?, ?, ?, ?)
>>
>> [params=(String) none, (String)
>> tempNode_56f41083-10be-4161-8803-ee1106bd3f54, (null) null, (Timestamp)
>> 2015-08-17 06:49:01.613, (null) null, (String) A516147113, (null) null]}
>> [code=1048, state=23000]
>>
>> at
>> org.apache.openjpa.lib.jdbc.LoggingConnectionDecorator.wrap(LoggingConnectionDecorator.java:247)
>>
>> at
>> org.apache.openjpa.lib.jdbc.LoggingConnectionDecorator.wrap(LoggingConnectionDecorator.java:223)
>>
>> at
>> org.apache.openjpa.lib.jdbc.LoggingConnectionDecorator.access$1000(LoggingConnectionDecorator.java:72)
>>
>> at
>> org.apache.openjpa.lib.jdbc.LoggingConnectionDecorator$LoggingConnection$LoggingPreparedStatement.executeUpdate(LoggingConnectionDecorator.java:1162)
>>
>> at
>> org.apache.openjpa.lib.jdbc.DelegatingPreparedStatement.executeUpdate(DelegatingPreparedStatement.java:272)
>>
>> at
>> org.apache.openjpa.jdbc.kernel.JDBCStoreManager$CancelPreparedStatement.executeUpdate(JDBCStoreManager.java:1741)
>>
>> at
>> org.apache.openjpa.jdbc.kernel.PreparedStatementManagerImpl.executeUpdate(PreparedStatementManagerImpl.java:267)
>>
>> at
>> org.apache.openjpa.jdbc.kernel.PreparedStatementManagerImpl.flushAndUpdate(PreparedStatementManagerImpl.java:118)
>>
>> ... 31 more
>>
>> 2015-08-17 06:49:01,666 [pool-8-thread-56] ERROR
>> org.apache.airavata.persistance.registry.jpa.impl.RegistryImpl  - Error
>> while adding JOB_DETAIL
>>
>> org.apache.airavata.registry.cpi.RegistryException:
>> org.apache.airavata.registry.cpi.RegistryException:
>> org.apache.airavata.registry.cpi.RegistryException:
>> <openjpa-2.2.0-r422266:1244990 fatal store error>
>> org.apache.openjpa.persistence.RollbackException: The transaction has been
>> rolled back.  See the nested exceptions for details on the errors that
>> occurred.
>>
>> FailedObject:
>> org.apache.airavata.persistance.registry.jpa.model.JobDetail@6f1d32ff
>>
>> at
>> org.apache.airavata.persistance.registry.jpa.impl.RegistryImpl.add(RegistryImpl.java:181)
>>
>> at
>> org.apache.airavata.gfac.core.utils.GFacUtils.saveJobStatus(GFacUtils.java:232)
>>
>> at
>> org.apache.airavata.gfac.ssh.provider.impl.SSHProvider.execute(SSHProvider.java:215)
>>
>> at
>> org.apache.airavata.gfac.core.cpi.BetterGfacImpl.executeProvider(BetterGfacImpl.java:842)
>>
>> at
>> org.apache.airavata.gfac.core.cpi.BetterGfacImpl.invokeProviderExecute(BetterGfacImpl.java:753)
>>
>> at
>> org.apache.airavata.gfac.core.cpi.BetterGfacImpl.launch(BetterGfacImpl.java:703)
>>
>> at
>> org.apache.airavata.gfac.core.cpi.BetterGfacImpl.submitJob(BetterGfacImpl.java:492)
>>
>> at
>> org.apache.airavata.gfac.core.cpi.BetterGfacImpl.submitJob(BetterGfacImpl.java:183)
>>
>> at
>> org.apache.airavata.gfac.core.utils.InputHandlerWorker.run(InputHandlerWorker.java:47)
>>
>> at
>> java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1142)
>>
>> at
>> java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:617)
>>
>> at java.lang.Thread.run(Thread.java:745)
>>
>> Caused by: org.apache.airavata.registry.cpi.RegistryException:
>> org.apache.airavata.registry.cpi.RegistryException:
>> <openjpa-2.2.0-r422266:1244990 fatal store error>
>> org.apache.openjpa.persistence.RollbackException: The transaction has been
>> rolled back.  See the nested exceptions for details on the errors that
>> occurred.
>>
>> FailedObject:
>> org.apache.airavata.persistance.registry.jpa.model.JobDetail@6f1d32ff
>>
>> at
>> org.apache.airavata.persistance.registry.jpa.impl.ExperimentRegistry.addJobDetails(ExperimentRegistry.java:1231)
>>
>> at
>> org.apache.airavata.persistance.registry.jpa.impl.RegistryImpl.add(RegistryImpl.java:157)
>>
>> ... 11 more
>>
>> Caused by: org.apache.airavata.registry.cpi.RegistryException:
>> <openjpa-2.2.0-r422266:1244990 fatal store error>
>> org.apache.openjpa.persistence.RollbackException: The transaction has been
>> rolled back.  See the nested exceptions for details on the errors that
>> occurred.
>>
>> FailedObject:
>> org.apache.airavata.persistance.registry.jpa.model.JobDetail@6f1d32ff
>>
>> at
>> org.apache.airavata.persistance.registry.jpa.resources.JobDetailResource.save(JobDetailResource.java:312)
>>
>> at
>> org.apache.airavata.persistance.registry.jpa.impl.ExperimentRegistry.addJobDetails(ExperimentRegistry.java:1203)
>>
>> ... 12 more
>>
>> Caused by: <openjpa-2.2.0-r422266:1244990 fatal store error>
>> org.apache.openjpa.persistence.RollbackException: The transaction has been
>> rolled back.  See the nested exceptions for details on the errors that
>> occurred.
>>
>> FailedObject:
>> org.apache.airavata.persistance.registry.jpa.model.JobDetail@6f1d32ff
>>
>> at
>> org.apache.openjpa.persistence.EntityManagerImpl.commit(EntityManagerImpl.java:594)
>>
>> at
>> org.apache.airavata.persistance.registry.jpa.resources.JobDetailResource.save(JobDetailResource.java:308)
>>
>> ... 13 more
>>
>> Caused by: <openjpa-2.2.0-r422266:1244990 fatal store error>
>> org.apache.openjpa.persistence.EntityExistsException: The transaction has
>> been rolled back.  See the nested exceptions for details on the errors that
>> occurred.
>>
>> FailedObject:
>> org.apache.airavata.persistance.registry.jpa.model.JobDetail@6f1d32ff
>>
>> at
>> org.apache.openjpa.kernel.BrokerImpl.newFlushException(BrokerImpl.java:2337)
>>
>> at org.apache.openjpa.kernel.BrokerImpl.flush(BrokerImpl.java:2174)
>>
>> at org.apache.openjpa.kernel.BrokerImpl.flushSafe(BrokerImpl.java:2072)
>>
>> at
>> org.apache.openjpa.kernel.BrokerImpl.beforeCompletion(BrokerImpl.java:1990)
>>
>> at
>> org.apache.openjpa.kernel.LocalManagedRuntime.commit(LocalManagedRuntime.java:81)
>>
>> at org.apache.openjpa.kernel.BrokerImpl.commit(BrokerImpl.java:1514)
>>
>> at
>> org.apache.openjpa.kernel.DelegatingBroker.commit(DelegatingBroker.java:933)
>>
>> at
>> org.apache.openjpa.persistence.EntityManagerImpl.commit(EntityManagerImpl.java:570)
>>
>> ... 14 more
>>
>> Caused by: <openjpa-2.2.0-r422266:1244990 fatal store error>
>> org.apache.openjpa.persistence.EntityExistsException: Column
>> 'JOB_DESCRIPTION' cannot be null {prepstmnt 1744538295
>>
>> INSERT INTO JOB_DETAIL (JOB_ID, TASK_ID, COMPUTE_RESOURCE_CONSUMED,
>>
>>         CREATION_TIME, JOB_DESCRIPTION, JOBNAME, WORKING_DIR)
>>
>>     VALUES (?, ?, ?, ?, ?, ?, ?)
>>
>> [params=(String) none, (String)
>> tempNode_56f41083-10be-4161-8803-ee1106bd3f54, (null) null, (Timestamp)
>> 2015-08-17 06:49:01.613, (null) null, (String) A516147113, (null) null]}
>> [code=1048, state=23000]
>>
>> FailedObject:
>> org.apache.airavata.persistance.registry.jpa.model.JobDetail@6f1d32ff
>>
>> at org.apache.openjpa.jdbc.sql.DBDictionary.narrow(DBDictionary.java:4903)
>>
>> at
>> org.apache.openjpa.jdbc.sql.DBDictionary.newStoreException(DBDictionary.java:4878)
>>
>> at
>> org.apache.openjpa.jdbc.sql.SQLExceptions.getStore(SQLExceptions.java:136)
>>
>> at
>> org.apache.openjpa.jdbc.sql.SQLExceptions.getStore(SQLExceptions.java:78)
>>
>> at
>> org.apache.openjpa.jdbc.kernel.PreparedStatementManagerImpl.flushAndUpdate(PreparedStatementManagerImpl.java:143)
>>
>> at
>> org.apache.openjpa.jdbc.kernel.BatchingPreparedStatementManagerImpl.flushAndUpdate(BatchingPreparedStatementManagerImpl.java:79)
>>
>> at
>> org.apache.openjpa.jdbc.kernel.PreparedStatementManagerImpl.flushInternal(PreparedStatementManagerImpl.java:99)
>>
>> at
>> org.apache.openjpa.jdbc.kernel.PreparedStatementManagerImpl.flush(PreparedStatementManagerImpl.java:87)
>>
>> at
>> org.apache.openjpa.jdbc.kernel.ConstraintUpdateManager.flush(ConstraintUpdateManager.java:550)
>>
>> at
>> org.apache.openjpa.jdbc.kernel.ConstraintUpdateManager.flush(ConstraintUpdateManager.java:106)
>>
>> at
>> org.apache.openjpa.jdbc.kernel.BatchingConstraintUpdateManager.flush(BatchingConstraintUpdateManager.java:59)
>>
>> at
>> org.apache.openjpa.jdbc.kernel.AbstractUpdateManager.flush(AbstractUpdateManager.java:103)
>>
>> at
>> org.apache.openjpa.jdbc.kernel.AbstractUpdateManager.flush(AbstractUpdateManager.java:76)
>>
>> at
>> org.apache.openjpa.jdbc.kernel.JDBCStoreManager.flush(JDBCStoreManager.java:713)
>>
>> at
>> org.apache.openjpa.kernel.DelegatingStoreManager.flush(DelegatingStoreManager.java:131)
>>
>> ... 21 more
>>
>> Caused by: org.apache.openjpa.lib.jdbc.ReportingSQLException: Column
>> 'JOB_DESCRIPTION' cannot be null {prepstmnt 1744538295
>>
>> INSERT INTO JOB_DETAIL (JOB_ID, TASK_ID, COMPUTE_RESOURCE_CONSUMED,
>>
>>         CREATION_TIME, JOB_DESCRIPTION, JOBNAME, WORKING_DIR)
>>
>>     VALUES (?, ?, ?, ?, ?, ?, ?)
>>
>> [params=(String) none, (String)
>> tempNode_56f41083-10be-4161-8803-ee1106bd3f54, (null) null, (Timestamp)
>> 2015-08-17 06:49:01.613, (null) null, (String) A516147113, (null) null]}
>> [code=1048, state=23000]
>>
>> at
>> org.apache.openjpa.lib.jdbc.LoggingConnectionDecorator.wrap(LoggingConnectionDecorator.java:247)
>>
>> at
>> org.apache.openjpa.lib.jdbc.LoggingConnectionDecorator.wrap(LoggingConnectionDecorator.java:223)
>>
>> at
>> org.apache.openjpa.lib.jdbc.LoggingConnectionDecorator.access$1000(LoggingConnectionDecorator.java:72)
>>
>> at
>> org.apache.openjpa.lib.jdbc.LoggingConnectionDecorator$LoggingConnection$LoggingPreparedStatement.executeUpdate(LoggingConnectionDecorator.java:1162)
>>
>> at
>> org.apache.openjpa.lib.jdbc.DelegatingPreparedStatement.executeUpdate(DelegatingPreparedStatement.java:272)
>>
>> at
>> org.apache.openjpa.jdbc.kernel.JDBCStoreManager$CancelPreparedStatement.executeUpdate(JDBCStoreManager.java:1741)
>>
>> at
>> org.apache.openjpa.jdbc.kernel.PreparedStatementManagerImpl.executeUpdate(PreparedStatementManagerImpl.java:267)
>>
>> at
>> org.apache.openjpa.jdbc.kernel.PreparedStatementManagerImpl.flushAndUpdate(PreparedStatementManagerImpl.java:118)
>>
>> ... 31 more
>>
>> 2015-08-17 06:49:01,690 [pool-8-thread-56] ERROR
>> org.apache.airavata.gfac.GFacException  - Error persisting job statusError
>> while adding JOB_DETAIL
>>
>> org.apache.airavata.registry.cpi.RegistryException: Error while adding
>> JOB_DETAIL
>>
>> at
>> org.apache.airavata.persistance.registry.jpa.impl.RegistryImpl.add(RegistryImpl.java:182)
>>
>> at
>> org.apache.airavata.gfac.core.utils.GFacUtils.saveJobStatus(GFacUtils.java:232)
>>
>> at
>> org.apache.airavata.gfac.ssh.provider.impl.SSHProvider.execute(SSHProvider.java:215)
>>
>> at
>> org.apache.airavata.gfac.core.cpi.BetterGfacImpl.executeProvider(BetterGfacImpl.java:842)
>>
>> at
>> org.apache.airavata.gfac.core.cpi.BetterGfacImpl.invokeProviderExecute(BetterGfacImpl.java:753)
>>
>> at
>> org.apache.airavata.gfac.core.cpi.BetterGfacImpl.launch(BetterGfacImpl.java:703)
>>
>> at
>> org.apache.airavata.gfac.core.cpi.BetterGfacImpl.submitJob(BetterGfacImpl.java:492)
>>
>> at
>> org.apache.airavata.gfac.core.cpi.BetterGfacImpl.submitJob(BetterGfacImpl.java:183)
>>
>> at
>> org.apache.airavata.gfac.core.utils.InputHandlerWorker.run(InputHandlerWorker.java:47)
>>
>> at
>> java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1142)
>>
>> at
>> java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:617)
>>
>> at java.lang.Thread.run(Thread.java:745)
>>
>> Caused by: org.apache.airavata.registry.cpi.RegistryException:
>> org.apache.airavata.registry.cpi.RegistryException:
>> <openjpa-2.2.0-r422266:1244990 fatal store error>
>> org.apache.openjpa.persistence.RollbackException: The transaction has been
>> rolled back.  See the nested exceptions for details on the errors that
>> occurred.
>>
>> FailedObject:
>> org.apache.airavata.persistance.registry.jpa.model.JobDetail@6f1d32ff
>>
>> at
>> org.apache.airavata.persistance.registry.jpa.impl.ExperimentRegistry.addJobDetails(ExperimentRegistry.java:1231)
>>
>> at
>> org.apache.airavata.persistance.registry.jpa.impl.RegistryImpl.add(RegistryImpl.java:157)
>>
>> ... 11 more
>>
>> Caused by: org.apache.airavata.registry.cpi.RegistryException:
>> <openjpa-2.2.0-r422266:1244990 fatal store error>
>> org.apache.openjpa.persistence.RollbackException: The transaction has been
>> rolled back.  See the nested exceptions for details on the errors that
>> occurred.
>>
>> FailedObject:
>> org.apache.airavata.persistance.registry.jpa.model.JobDetail@6f1d32ff
>>
>> at
>> org.apache.airavata.persistance.registry.jpa.resources.JobDetailResource.save(JobDetailResource.java:312)
>>
>> at
>> org.apache.airavata.persistance.registry.jpa.impl.ExperimentRegistry.addJobDetails(ExperimentRegistry.java:1203)
>>
>> ... 12 more
>>
>> Caused by: <openjpa-2.2.0-r422266:1244990 fatal store error>
>> org.apache.openjpa.persistence.RollbackException: The transaction has been
>> rolled back.  See the nested exceptions for details on the errors that
>> occurred.
>>
>> FailedObject:
>> org.apache.airavata.persistance.registry.jpa.model.JobDetail@6f1d32ff
>>
>> at
>> org.apache.openjpa.persistence.EntityManagerImpl.commit(EntityManagerImpl.java:594)
>>
>> at
>> org.apache.airavata.persistance.registry.jpa.resources.JobDetailResource.save(JobDetailResource.java:308)
>>
>> ... 13 more
>>
>> Caused by: <openjpa-2.2.0-r422266:1244990 fatal store error>
>> org.apache.openjpa.persistence.EntityExistsException: The transaction has
>> been rolled back.  See the nested exceptions for details on the errors that
>> occurred.
>>
>> FailedObject:
>> org.apache.airavata.persistance.registry.jpa.model.JobDetail@6f1d32ff
>>
>> at
>> org.apache.openjpa.kernel.BrokerImpl.newFlushException(BrokerImpl.java:2337)
>>
>> at org.apache.openjpa.kernel.BrokerImpl.flush(BrokerImpl.java:2174)
>>
>> at org.apache.openjpa.kernel.BrokerImpl.flushSafe(BrokerImpl.java:2072)
>>
>> at
>> org.apache.openjpa.kernel.BrokerImpl.beforeCompletion(BrokerImpl.java:1990)
>>
>> at
>> org.apache.openjpa.kernel.LocalManagedRuntime.commit(LocalManagedRuntime.java:81)
>>
>> at org.apache.openjpa.kernel.BrokerImpl.commit(BrokerImpl.java:1514)
>>
>> at
>> org.apache.openjpa.kernel.DelegatingBroker.commit(DelegatingBroker.java:933)
>>
>> at
>> org.apache.openjpa.persistence.EntityManagerImpl.commit(EntityManagerImpl.java:570)
>>
>> ... 14 more
>>
>> Caused by: <openjpa-2.2.0-r422266:1244990 fatal store error>
>> org.apache.openjpa.persistence.EntityExistsException: Column
>> 'JOB_DESCRIPTION' cannot be null {prepstmnt 1744538295
>>
>> INSERT INTO JOB_DETAIL (JOB_ID, TASK_ID, COMPUTE_RESOURCE_CONSUMED,
>>
>>         CREATION_TIME, JOB_DESCRIPTION, JOBNAME, WORKING_DIR)
>>
>>     VALUES (?, ?, ?, ?, ?, ?, ?)
>>
>> [params=(String) none, (String)
>> tempNode_56f41083-10be-4161-8803-ee1106bd3f54, (null) null, (Timestamp)
>> 2015-08-17 06:49:01.613, (null) null, (String) A516147113, (null) null]}
>> [code=1048, state=23000]
>>
>> FailedObject:
>> org.apache.airavata.persistance.registry.jpa.model.JobDetail@6f1d32ff
>>
>> at org.apache.openjpa.jdbc.sql.DBDictionary.narrow(DBDictionary.java:4903)
>>
>> at
>> org.apache.openjpa.jdbc.sql.DBDictionary.newStoreException(DBDictionary.java:4878)
>>
>> at
>> org.apache.openjpa.jdbc.sql.SQLExceptions.getStore(SQLExceptions.java:136)
>>
>> at
>> org.apache.openjpa.jdbc.sql.SQLExceptions.getStore(SQLExceptions.java:78)
>>
>> at
>> org.apache.openjpa.jdbc.kernel.PreparedStatementManagerImpl.flushAndUpdate(PreparedStatementManagerImpl.java:143)
>>
>> at
>> org.apache.openjpa.jdbc.kernel.BatchingPreparedStatementManagerImpl.flushAndUpdate(BatchingPreparedStatementManagerImpl.java:79)
>>
>> at
>> org.apache.openjpa.jdbc.kernel.PreparedStatementManagerImpl.flushInternal(PreparedStatementManagerImpl.java:99)
>>
>> at
>> org.apache.openjpa.jdbc.kernel.PreparedStatementManagerImpl.flush(PreparedStatementManagerImpl.java:87)
>>
>> at
>> org.apache.openjpa.jdbc.kernel.ConstraintUpdateManager.flush(ConstraintUpdateManager.java:550)
>>
>> at
>> org.apache.openjpa.jdbc.kernel.ConstraintUpdateManager.flush(ConstraintUpdateManager.java:106)
>>
>> at
>> org.apache.openjpa.jdbc.kernel.BatchingConstraintUpdateManager.flush(BatchingConstraintUpdateManager.java:59)
>>
>> at
>> org.apache.openjpa.jdbc.kernel.AbstractUpdateManager.flush(AbstractUpdateManager.java:103)
>>
>> at
>> org.apache.openjpa.jdbc.kernel.AbstractUpdateManager.flush(AbstractUpdateManager.java:76)
>>
>> at
>> org.apache.openjpa.jdbc.kernel.JDBCStoreManager.flush(JDBCStoreManager.java:713)
>>
>> at
>> org.apache.openjpa.kernel.DelegatingStoreManager.flush(DelegatingStoreManager.java:131)
>>
>> ... 21 more
>>
>> Caused by: org.apache.openjpa.lib.jdbc.ReportingSQLException: Column
>> 'JOB_DESCRIPTION' cannot be null {prepstmnt 1744538295
>>
>> INSERT INTO JOB_DETAIL (JOB_ID, TASK_ID, COMPUTE_RESOURCE_CONSUMED,
>>
>>         CREATION_TIME, JOB_DESCRIPTION, JOBNAME, WORKING_DIR)
>>
>>     VALUES (?, ?, ?, ?, ?, ?, ?)
>>
>> [params=(String) none, (String)
>> tempNode_56f41083-10be-4161-8803-ee1106bd3f54, (null) null, (Timestamp)
>> 2015-08-17 06:49:01.613, (null) null, (String) A516147113, (null) null]}
>> [code=1048, state=23000]
>>
>> at
>> org.apache.openjpa.lib.jdbc.LoggingConnectionDecorator.wrap(LoggingConnectionDecorator.java:247)
>>
>> at
>> org.apache.openjpa.lib.jdbc.LoggingConnectionDecorator.wrap(LoggingConnectionDecorator.java:223)
>>
>> at
>> org.apache.openjpa.lib.jdbc.LoggingConnectionDecorator.access$1000(LoggingConnectionDecorator.java:72)
>>
>> at
>> org.apache.openjpa.lib.jdbc.LoggingConnectionDecorator$LoggingConnection$LoggingPreparedStatement.executeUpdate(LoggingConnectionDecorator.java:1162)
>>
>> at
>> org.apache.openjpa.lib.jdbc.DelegatingPreparedStatement.executeUpdate(DelegatingPreparedStatement.java:272)
>>
>> at
>> org.apache.openjpa.jdbc.kernel.JDBCStoreManager$CancelPreparedStatement.executeUpdate(JDBCStoreManager.java:1741)
>>
>> at
>> org.apache.openjpa.jdbc.kernel.PreparedStatementManagerImpl.executeUpdate(PreparedStatementManagerImpl.java:267)
>>
>> at
>> org.apache.openjpa.jdbc.kernel.PreparedStatementManagerImpl.flushAndUpdate(PreparedStatementManagerImpl.java:118)
>>
>> ... 31 more
>>
>> 2015-08-17 06:49:01,691 [pool-8-thread-56] INFO
>> org.apache.airavata.gfac.ssh.provider.impl.SSHProvider  - Saving data for
>> future recovery:
>>
>> 2015-08-17 06:49:01,691 [pool-8-thread-56] INFO
>> org.apache.airavata.gfac.ssh.provider.impl.SSHProvider  -
>>
>> 2015-08-17 06:49:01,721 [pool-8-thread-56] ERROR
>> org.apache.airavata.gfac.core.provider.GFacProviderException  - Error
>> persisting job statusError while adding JOB_DETAIL
>>
>> org.apache.airavata.gfac.GFacException: Error persisting job statusError
>> while adding JOB_DETAIL
>>
>> at
>> org.apache.airavata.gfac.core.utils.GFacUtils.saveJobStatus(GFacUtils.java:242)
>>
>> at
>> org.apache.airavata.gfac.ssh.provider.impl.SSHProvider.execute(SSHProvider.java:215)
>>
>> at
>> org.apache.airavata.gfac.core.cpi.BetterGfacImpl.executeProvider(BetterGfacImpl.java:842)
>>
>> at
>> org.apache.airavata.gfac.core.cpi.BetterGfacImpl.invokeProviderExecute(BetterGfacImpl.java:753)
>>
>> at
>> org.apache.airavata.gfac.core.cpi.BetterGfacImpl.launch(BetterGfacImpl.java:703)
>>
>> at
>> org.apache.airavata.gfac.core.cpi.BetterGfacImpl.submitJob(BetterGfacImpl.java:492)
>>
>> at
>> org.apache.airavata.gfac.core.cpi.BetterGfacImpl.submitJob(BetterGfacImpl.java:183)
>>
>> at
>> org.apache.airavata.gfac.core.utils.InputHandlerWorker.run(InputHandlerWorker.java:47)
>>
>> at
>> java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1142)
>>
>> at
>> java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:617)
>>
>> at java.lang.Thread.run(Thread.java:745)
>>
>> Caused by: org.apache.airavata.registry.cpi.RegistryException: Error
>> while adding JOB_DETAIL
>>
>> at
>> org.apache.airavata.persistance.registry.jpa.impl.RegistryImpl.add(RegistryImpl.java:182)
>>
>> at
>> org.apache.airavata.gfac.core.utils.GFacUtils.saveJobStatus(GFacUtils.java:232)
>>
>> ... 10 more
>>
>> Caused by: org.apache.airavata.registry.cpi.RegistryException:
>> org.apache.airavata.registry.cpi.RegistryException:
>> <openjpa-2.2.0-r422266:1244990 fatal store error>
>> org.apache.openjpa.persistence.RollbackException: The transaction has been
>> rolled back.  See the nested exceptions for details on the errors that
>> occurred.
>>
>> FailedObject:
>> org.apache.airavata.persistance.registry.jpa.model.JobDetail@6f1d32ff
>>
>> at
>> org.apache.airavata.persistance.registry.jpa.impl.ExperimentRegistry.addJobDetails(ExperimentRegistry.java:1231)
>>
>> at
>> org.apache.airavata.persistance.registry.jpa.impl.RegistryImpl.add(RegistryImpl.java:157)
>>
>> ... 11 more
>>
>> Caused by: org.apache.airavata.registry.cpi.RegistryException:
>> <openjpa-2.2.0-r422266:1244990 fatal store error>
>> org.apache.openjpa.persistence.RollbackException: The transaction has been
>> rolled back.  See the nested exceptions for details on the errors that
>> occurred.
>>
>> FailedObject:
>> org.apache.airavata.persistance.registry.jpa.model.JobDetail@6f1d32ff
>>
>> at
>> org.apache.airavata.persistance.registry.jpa.resources.JobDetailResource.save(JobDetailResource.java:312)
>>
>> at
>> org.apache.airavata.persistance.registry.jpa.impl.ExperimentRegistry.addJobDetails(ExperimentRegistry.java:1203)
>>
>> ... 12 more
>>
>> Caused by: <openjpa-2.2.0-r422266:1244990 fatal store error>
>> org.apache.openjpa.persistence.RollbackException: The transaction has been
>> rolled back.  See the nested exceptions for details on the errors that
>> occurred.
>>
>> FailedObject:
>> org.apache.airavata.persistance.registry.jpa.model.JobDetail@6f1d32ff
>>
>> at
>> org.apache.openjpa.persistence.EntityManagerImpl.commit(EntityManagerImpl.java:594)
>>
>> at
>> org.apache.airavata.persistance.registry.jpa.resources.JobDetailResource.save(JobDetailResource.java:308)
>>
>> ... 13 more
>>
>> Caused by: <openjpa-2.2.0-r422266:1244990 fatal store error>
>> org.apache.openjpa.persistence.EntityExistsException: The transaction has
>> been rolled back.  See the nested exceptions for details on the errors that
>> occurred.
>>
>> FailedObject:
>> org.apache.airavata.persistance.registry.jpa.model.JobDetail@6f1d32ff
>>
>> at
>> org.apache.openjpa.kernel.BrokerImpl.newFlushException(BrokerImpl.java:2337)
>>
>> at org.apache.openjpa.kernel.BrokerImpl.flush(BrokerImpl.java:2174)
>>
>> at org.apache.openjpa.kernel.BrokerImpl.flushSafe(BrokerImpl.java:2072)
>>
>> at
>> org.apache.openjpa.kernel.BrokerImpl.beforeCompletion(BrokerImpl.java:1990)
>>
>> at
>> org.apache.openjpa.kernel.LocalManagedRuntime.commit(LocalManagedRuntime.java:81)
>>
>> at org.apache.openjpa.kernel.BrokerImpl.commit(BrokerImpl.java:1514)
>>
>> at
>> org.apache.openjpa.kernel.DelegatingBroker.commit(DelegatingBroker.java:933)
>>
>> at
>> org.apache.openjpa.persistence.EntityManagerImpl.commit(EntityManagerImpl.java:570)
>>
>> ... 14 more
>>
>> Caused by: <openjpa-2.2.0-r422266:1244990 fatal store error>
>> org.apache.openjpa.persistence.EntityExistsException: Column
>> 'JOB_DESCRIPTION' cannot be null {prepstmnt 1744538295
>>
>> INSERT INTO JOB_DETAIL (JOB_ID, TASK_ID, COMPUTE_RESOURCE_CONSUMED,
>>
>>         CREATION_TIME, JOB_DESCRIPTION, JOBNAME, WORKING_DIR)
>>
>>     VALUES (?, ?, ?, ?, ?, ?, ?)
>>
>> [params=(String) none, (String)
>> tempNode_56f41083-10be-4161-8803-ee1106bd3f54, (null) null, (Timestamp)
>> 2015-08-17 06:49:01.613, (null) null, (String) A516147113, (null) null]}
>> [code=1048, state=23000]
>>
>> FailedObject:
>> org.apache.airavata.persistance.registry.jpa.model.JobDetail@6f1d32ff
>>
>> at org.apache.openjpa.jdbc.sql.DBDictionary.narrow(DBDictionary.java:4903)
>>
>> at
>> org.apache.openjpa.jdbc.sql.DBDictionary.newStoreException(DBDictionary.java:4878)
>>
>> at
>> org.apache.openjpa.jdbc.sql.SQLExceptions.getStore(SQLExceptions.java:136)
>>
>> at
>> org.apache.openjpa.jdbc.sql.SQLExceptions.getStore(SQLExceptions.java:78)
>>
>> at
>> org.apache.openjpa.jdbc.kernel.PreparedStatementManagerImpl.flushAndUpdate(PreparedStatementManagerImpl.java:143)
>>
>> at
>> org.apache.openjpa.jdbc.kernel.BatchingPreparedStatementManagerImpl.flushAndUpdate(BatchingPreparedStatementManagerImpl.java:79)
>>
>> at
>> org.apache.openjpa.jdbc.kernel.PreparedStatementManagerImpl.flushInternal(PreparedStatementManagerImpl.java:99)
>>
>> at
>> org.apache.openjpa.jdbc.kernel.PreparedStatementManagerImpl.flush(PreparedStatementManagerImpl.java:87)
>>
>> at
>> org.apache.openjpa.jdbc.kernel.ConstraintUpdateManager.flush(ConstraintUpdateManager.java:550)
>>
>> at
>> org.apache.openjpa.jdbc.kernel.ConstraintUpdateManager.flush(ConstraintUpdateManager.java:106)
>>
>> at
>> org.apache.openjpa.jdbc.kernel.BatchingConstraintUpdateManager.flush(BatchingConstraintUpdateManager.java:59)
>>
>> at
>> org.apache.openjpa.jdbc.kernel.AbstractUpdateManager.flush(AbstractUpdateManager.java:103)
>>
>> at
>> org.apache.openjpa.jdbc.kernel.AbstractUpdateManager.flush(AbstractUpdateManager.java:76)
>>
>> at
>> org.apache.openjpa.jdbc.kernel.JDBCStoreManager.flush(JDBCStoreManager.java:713)
>>
>> at
>> org.apache.openjpa.kernel.DelegatingStoreManager.flush(DelegatingStoreManager.java:131)
>>
>> ... 21 more
>>
>> Caused by: org.apache.openjpa.lib.jdbc.ReportingSQLException: Column
>> 'JOB_DESCRIPTION' cannot be null {prepstmnt 1744538295
>>
>> INSERT INTO JOB_DETAIL (JOB_ID, TASK_ID, COMPUTE_RESOURCE_CONSUMED,
>>
>>         CREATION_TIME, JOB_DESCRIPTION, JOBNAME, WORKING_DIR)
>>
>>     VALUES (?, ?, ?, ?, ?, ?, ?)
>>
>> [params=(String) none, (String)
>> tempNode_56f41083-10be-4161-8803-ee1106bd3f54, (null) null, (Timestamp)
>> 2015-08-17 06:49:01.613, (null) null, (String) A516147113, (null) null]}
>> [code=1048, state=23000]
>>
>> at
>> org.apache.openjpa.lib.jdbc.LoggingConnectionDecorator.wrap(LoggingConnectionDecorator.java:247)
>>
>> at
>> org.apache.openjpa.lib.jdbc.LoggingConnectionDecorator.wrap(LoggingConnectionDecorator.java:223)
>>
>> at
>> org.apache.openjpa.lib.jdbc.LoggingConnectionDecorator.access$1000(LoggingConnectionDecorator.java:72)
>>
>> at
>> org.apache.openjpa.lib.jdbc.LoggingConnectionDecorator$LoggingConnection$LoggingPreparedStatement.executeUpdate(LoggingConnectionDecorator.java:1162)
>>
>> at
>> org.apache.openjpa.lib.jdbc.DelegatingPreparedStatement.executeUpdate(DelegatingPreparedStatement.java:272)
>>
>> at
>> org.apache.openjpa.jdbc.kernel.JDBCStoreManager$CancelPreparedStatement.executeUpdate(JDBCStoreManager.java:1741)
>>
>> at
>> org.apache.openjpa.jdbc.kernel.PreparedStatementManagerImpl.executeUpdate(PreparedStatementManagerImpl.java:267)
>>
>> at
>> org.apache.openjpa.jdbc.kernel.PreparedStatementManagerImpl.flushAndUpdate(PreparedStatementManagerImpl.java:118)
>>
>> ... 31 more
>>
>> 2015-08-17 06:49:01,723 [pool-8-thread-56] ERROR
>> org.apache.airavata.gfac.GFacException  - Error while executing provider
>> org.apache.airavata.gfac.ssh.provider.impl.SSHProvider functionality.
>>
>> org.apache.airavata.gfac.core.provider.GFacProviderException: Error
>> persisting job statusError while adding JOB_DETAIL
>>
>> at
>> org.apache.airavata.gfac.ssh.provider.impl.SSHProvider.execute(SSHProvider.java:231)
>>
>> at
>> org.apache.airavata.gfac.core.cpi.BetterGfacImpl.executeProvider(BetterGfacImpl.java:842)
>>
>> at
>> org.apache.airavata.gfac.core.cpi.BetterGfacImpl.invokeProviderExecute(BetterGfacImpl.java:753)
>>
>> at
>> org.apache.airavata.gfac.core.cpi.BetterGfacImpl.launch(BetterGfacImpl.java:703)
>>
>> at
>> org.apache.airavata.gfac.core.cpi.BetterGfacImpl.submitJob(BetterGfacImpl.java:492)
>>
>> at
>> org.apache.airavata.gfac.core.cpi.BetterGfacImpl.submitJob(BetterGfacImpl.java:183)
>>
>> at
>> org.apache.airavata.gfac.core.utils.InputHandlerWorker.run(InputHandlerWorker.java:47)
>>
>> at
>> java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1142)
>>
>> at
>> java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:617)
>>
>> at java.lang.Thread.run(Thread.java:745)
>>
>> Caused by: org.apache.airavata.gfac.GFacException: Error persisting job
>> statusError while adding JOB_DETAIL
>>
>> at
>> org.apache.airavata.gfac.core.utils.GFacUtils.saveJobStatus(GFacUtils.java:242)
>>
>> at
>> org.apache.airavata.gfac.ssh.provider.impl.SSHProvider.execute(SSHProvider.java:215)
>>
>> ... 9 more
>>
>> Caused by: org.apache.airavata.registry.cpi.RegistryException: Error
>> while adding JOB_DETAIL
>>
>> at
>> org.apache.airavata.persistance.registry.jpa.impl.RegistryImpl.add(RegistryImpl.java:182)
>>
>> at
>> org.apache.airavata.gfac.core.utils.GFacUtils.saveJobStatus(GFacUtils.java:232)
>>
>> ... 10 more
>>
>> Caused by: org.apache.airavata.registry.cpi.RegistryException:
>> org.apache.airavata.registry.cpi.RegistryException:
>> <openjpa-2.2.0-r422266:1244990 fatal store error>
>> org.apache.openjpa.persistence.RollbackException: The transaction has been
>> rolled back.  See the nested exceptions for details on the errors that
>> occurred.
>>
>> FailedObject:
>> org.apache.airavata.persistance.registry.jpa.model.JobDetail@6f1d32ff
>>
>> at
>> org.apache.airavata.persistance.registry.jpa.impl.ExperimentRegistry.addJobDetails(ExperimentRegistry.java:1231)
>>
>> at
>> org.apache.airavata.persistance.registry.jpa.impl.RegistryImpl.add(RegistryImpl.java:157)
>>
>> ... 11 more
>>
>> Caused by: org.apache.airavata.registry.cpi.RegistryException:
>> <openjpa-2.2.0-r422266:1244990 fatal store error>
>> org.apache.openjpa.persistence.RollbackException: The transaction has been
>> rolled back.  See the nested exceptions for details on the errors that
>> occurred.
>>
>> FailedObject:
>> org.apache.airavata.persistance.registry.jpa.model.JobDetail@6f1d32ff
>>
>> at
>> org.apache.airavata.persistance.registry.jpa.resources.JobDetailResource.save(JobDetailResource.java:312)
>>
>> at
>> org.apache.airavata.persistance.registry.jpa.impl.ExperimentRegistry.addJobDetails(ExperimentRegistry.java:1203)
>>
>> ... 12 more
>>
>> Caused by: <openjpa-2.2.0-r422266:1244990 fatal store error>
>> org.apache.openjpa.persistence.RollbackException: The transaction has been
>> rolled back.  See the nested exceptions for details on the errors that
>> occurred.
>>
>> FailedObject:
>> org.apache.airavata.persistance.registry.jpa.model.JobDetail@6f1d32ff
>>
>> at
>> org.apache.openjpa.persistence.EntityManagerImpl.commit(EntityManagerImpl.java:594)
>>
>> at
>> org.apache.airavata.persistance.registry.jpa.resources.JobDetailResource.save(JobDetailResource.java:308)
>>
>> ... 13 more
>>
>> Caused by: <openjpa-2.2.0-r422266:1244990 fatal store error>
>> org.apache.openjpa.persistence.EntityExistsException: The transaction has
>> been rolled back.  See the nested exceptions for details on the errors that
>> occurred.
>>
>> FailedObject:
>> org.apache.airavata.persistance.registry.jpa.model.JobDetail@6f1d32ff
>>
>> at
>> org.apache.openjpa.kernel.BrokerImpl.newFlushException(BrokerImpl.java:2337)
>>
>> at org.apache.openjpa.kernel.BrokerImpl.flush(BrokerImpl.java:2174)
>>
>> at org.apache.openjpa.kernel.BrokerImpl.flushSafe(BrokerImpl.java:2072)
>>
>> at
>> org.apache.openjpa.kernel.BrokerImpl.beforeCompletion(BrokerImpl.java:1990)
>>
>> at
>> org.apache.openjpa.kernel.LocalManagedRuntime.commit(LocalManagedRuntime.java:81)
>>
>> at org.apache.openjpa.kernel.BrokerImpl.commit(BrokerImpl.java:1514)
>>
>> at
>> org.apache.openjpa.kernel.DelegatingBroker.commit(DelegatingBroker.java:933)
>>
>> at
>> org.apache.openjpa.persistence.EntityManagerImpl.commit(EntityManagerImpl.java:570)
>>
>> ... 14 more
>>
>> Caused by: <openjpa-2.2.0-r422266:1244990 fatal store error>
>> org.apache.openjpa.persistence.EntityExistsException: Column
>> 'JOB_DESCRIPTION' cannot be null {prepstmnt 1744538295
>>
>> INSERT INTO JOB_DETAIL (JOB_ID, TASK_ID, COMPUTE_RESOURCE_CONSUMED,
>>
>>         CREATION_TIME, JOB_DESCRIPTION, JOBNAME, WORKING_DIR)
>>
>>     VALUES (?, ?, ?, ?, ?, ?, ?)
>>
>> [params=(String) none, (String)
>> tempNode_56f41083-10be-4161-8803-ee1106bd3f54, (null) null, (Timestamp)
>> 2015-08-17 06:49:01.613, (null) null, (String) A516147113, (null) null]}
>> [code=1048, state=23000]
>>
>> FailedObject:
>> org.apache.airavata.persistance.registry.jpa.model.JobDetail@6f1d32ff
>>
>> at org.apache.openjpa.jdbc.sql.DBDictionary.narrow(DBDictionary.java:4903)
>>
>> at
>> org.apache.openjpa.jdbc.sql.DBDictionary.newStoreException(DBDictionary.java:4878)
>>
>> at
>> org.apache.openjpa.jdbc.sql.SQLExceptions.getStore(SQLExceptions.java:136)
>>
>> at
>> org.apache.openjpa.jdbc.sql.SQLExceptions.getStore(SQLExceptions.java:78)
>>
>> at
>> org.apache.openjpa.jdbc.kernel.PreparedStatementManagerImpl.flushAndUpdate(PreparedStatementManagerImpl.java:143)
>>
>> at
>> org.apache.openjpa.jdbc.kernel.BatchingPreparedStatementManagerImpl.flushAndUpdate(BatchingPreparedStatementManagerImpl.java:79)
>>
>> at
>> org.apache.openjpa.jdbc.kernel.PreparedStatementManagerImpl.flushInternal(PreparedStatementManagerImpl.java:99)
>>
>> at
>> org.apache.openjpa.jdbc.kernel.PreparedStatementManagerImpl.flush(PreparedStatementManagerImpl.java:87)
>>
>> at
>> org.apache.openjpa.jdbc.kernel.ConstraintUpdateManager.flush(ConstraintUpdateManager.java:550)
>>
>> at
>> org.apache.openjpa.jdbc.kernel.ConstraintUpdateManager.flush(ConstraintUpdateManager.java:106)
>>
>> at
>> org.apache.openjpa.jdbc.kernel.BatchingConstraintUpdateManager.flush(BatchingConstraintUpdateManager.java:59)
>>
>> at
>> org.apache.openjpa.jdbc.kernel.AbstractUpdateManager.flush(AbstractUpdateManager.java:103)
>>
>> at
>> org.apache.openjpa.jdbc.kernel.AbstractUpdateManager.flush(AbstractUpdateManager.java:76)
>>
>> at
>> org.apache.openjpa.jdbc.kernel.JDBCStoreManager.flush(JDBCStoreManager.java:713)
>>
>> at
>> org.apache.openjpa.kernel.DelegatingStoreManager.flush(DelegatingStoreManager.java:131)
>>
>> ... 21 more
>>
>> Caused by: org.apache.openjpa.lib.jdbc.ReportingSQLException: Column
>> 'JOB_DESCRIPTION' cannot be null {prepstmnt 1744538295
>>
>> INSERT INTO JOB_DETAIL (JOB_ID, TASK_ID, COMPUTE_RESOURCE_CONSUMED,
>>
>>         CREATION_TIME, JOB_DESCRIPTION, JOBNAME, WORKING_DIR)
>>
>>     VALUES (?, ?, ?, ?, ?, ?, ?)
>>
>> [params=(String) none, (String)
>> tempNode_56f41083-10be-4161-8803-ee1106bd3f54, (null) null, (Timestamp)
>> 2015-08-17 06:49:01.613, (null) null, (String) A516147113, (null) null]}
>> [code=1048, state=23000]
>>
>> at
>> org.apache.openjpa.lib.jdbc.LoggingConnectionDecorator.wrap(LoggingConnectionDecorator.java:247)
>>
>> at
>> org.apache.openjpa.lib.jdbc.LoggingConnectionDecorator.wrap(LoggingConnectionDecorator.java:223)
>>
>> at
>> org.apache.openjpa.lib.jdbc.LoggingConnectionDecorator.access$1000(LoggingConnectionDecorator.java:72)
>>
>> at
>> org.apache.openjpa.lib.jdbc.LoggingConnectionDecorator$LoggingConnection$LoggingPreparedStatement.executeUpdate(LoggingConnectionDecorator.java:1162)
>>
>> at
>> org.apache.openjpa.lib.jdbc.DelegatingPreparedStatement.executeUpdate(DelegatingPreparedStatement.java:272)
>>
>> at
>> org.apache.openjpa.jdbc.kernel.JDBCStoreManager$CancelPreparedStatement.executeUpdate(JDBCStoreManager.java:1741)
>>
>> at
>> org.apache.openjpa.jdbc.kernel.PreparedStatementManagerImpl.executeUpdate(PreparedStatementManagerImpl.java:267)
>>
>> at
>> org.apache.openjpa.jdbc.kernel.PreparedStatementManagerImpl.flushAndUpdate(PreparedStatementManagerImpl.java:118)
>>
>> ... 31 more
>>
>> 2015-08-17 06:49:01,724 [pool-8-thread-56] ERROR
>> org.apache.airavata.gfac.core.monitor.MonitorID  - There is not job created
>> at this point
>>
>> 2015-08-17 06:49:01,724 [pool-8-thread-56] INFO
>> org.apache.airavata.gfac.core.monitor.GfacInternalStatusUpdator  - Gfac
>> internal state changed to: FAILED
>>
>> 2015-08-17 06:49:01,724 [pool-8-thread-56] INFO
>> org.apache.airavata.gfac.core.monitor.GfacInternalStatusUpdator  -
>> Experiment Failed, So removing the ZK entry for the
>> experimentdimuthu_experiment_gau_11_6e6ffc70-5dd2-4a9f-94b6-8cd6e672ec08
>>
>> 2015-08-17 06:49:01,724 [pool-8-thread-56] INFO
>> org.apache.airavata.gfac.core.monitor.GfacInternalStatusUpdator  -
>> Zookeeper experiment Path:
>> /gfac-experiments/gfac-node0/dimuthu_experiment_gau_11_6e6ffc70-5dd2-4a9f-94b6-8cd6e672ec08
>>
>> 2015-08-17 06:49:01,725 [pool-8-thread-56] ERROR
>> org.apache.airavata.gfac.core.cpi.BetterGfacImpl  - Error occured during
>> updating the statuses of Experiments,tasks or Job statuses to failed,
>> NullPointerException occurred because at this point there might not have
>> Job Created
>>
>> org.apache.airavata.gfac.GFacException: Error while executing provider
>> org.apache.airavata.gfac.ssh.provider.impl.SSHProvider functionality.
>>
>> at
>> org.apache.airavata.gfac.core.cpi.BetterGfacImpl.executeProvider(BetterGfacImpl.java:844)
>>
>> at
>> org.apache.airavata.gfac.core.cpi.BetterGfacImpl.invokeProviderExecute(BetterGfacImpl.java:753)
>>
>> at
>> org.apache.airavata.gfac.core.cpi.BetterGfacImpl.launch(BetterGfacImpl.java:703)
>>
>> at
>> org.apache.airavata.gfac.core.cpi.BetterGfacImpl.submitJob(BetterGfacImpl.java:492)
>>
>> at
>> org.apache.airavata.gfac.core.cpi.BetterGfacImpl.submitJob(BetterGfacImpl.java:183)
>>
>> at
>> org.apache.airavata.gfac.core.utils.InputHandlerWorker.run(InputHandlerWorker.java:47)
>>
>> at
>> java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1142)
>>
>> at
>> java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:617)
>>
>> at java.lang.Thread.run(Thread.java:745)
>>
>> Caused by: org.apache.airavata.gfac.core.provider.GFacProviderException:
>> Error persisting job statusError while adding JOB_DETAIL
>>
>> at
>> org.apache.airavata.gfac.ssh.provider.impl.SSHProvider.execute(SSHProvider.java:231)
>>
>> at
>> org.apache.airavata.gfac.core.cpi.BetterGfacImpl.executeProvider(BetterGfacImpl.java:842)
>>
>> ... 8 more
>>
>> Caused by: org.apache.airavata.gfac.GFacException: Error persisting job
>> statusError while adding JOB_DETAIL
>>
>> at
>> org.apache.airavata.gfac.core.utils.GFacUtils.saveJobStatus(GFacUtils.java:242)
>>
>> at
>> org.apache.airavata.gfac.ssh.provider.impl.SSHProvider.execute(SSHProvider.java:215)
>>
>> ... 9 more
>>
>> Caused by: org.apache.airavata.registry.cpi.RegistryException: Error
>> while adding JOB_DETAIL
>>
>> at
>> org.apache.airavata.persistance.registry.jpa.impl.RegistryImpl.add(RegistryImpl.java:182)
>>
>> at
>> org.apache.airavata.gfac.core.utils.GFacUtils.saveJobStatus(GFacUtils.java:232)
>>
>> ... 10 more
>>
>> Caused by: org.apache.airavata.registry.cpi.RegistryException:
>> org.apache.airavata.registry.cpi.RegistryException:
>> <openjpa-2.2.0-r422266:1244990 fatal store error>
>> org.apache.openjpa.persistence.RollbackException: The transaction has been
>> rolled back.  See the nested exceptions for details on the errors that
>> occurred.
>>
>> FailedObject:
>> org.apache.airavata.persistance.registry.jpa.model.JobDetail@6f1d32ff
>>
>> at
>> org.apache.airavata.persistance.registry.jpa.impl.ExperimentRegistry.addJobDetails(ExperimentRegistry.java:1231)
>>
>> at
>> org.apache.airavata.persistance.registry.jpa.impl.RegistryImpl.add(RegistryImpl.java:157)
>>
>> ... 11 more
>>
>> Caused by: org.apache.airavata.registry.cpi.RegistryException:
>> <openjpa-2.2.0-r422266:1244990 fatal store error>
>> org.apache.openjpa.persistence.RollbackException: The transaction has been
>> rolled back.  See the nested exceptions for details on the errors that
>> occurred.
>>
>> FailedObject:
>> org.apache.airavata.persistance.registry.jpa.model.JobDetail@6f1d32ff
>>
>> at
>> org.apache.airavata.persistance.registry.jpa.resources.JobDetailResource.save(JobDetailResource.java:312)
>>
>> at
>> org.apache.airavata.persistance.registry.jpa.impl.ExperimentRegistry.addJobDetails(ExperimentRegistry.java:1203)
>>
>> ... 12 more
>>
>> Caused by: <openjpa-2.2.0-r422266:1244990 fatal store error>
>> org.apache.openjpa.persistence.RollbackException: The transaction has been
>> rolled back.  See the nested exceptions for details on the errors that
>> occurred.
>>
>> FailedObject:
>> org.apache.airavata.persistance.registry.jpa.model.JobDetail@6f1d32ff
>>
>> at
>> org.apache.openjpa.persistence.EntityManagerImpl.commit(EntityManagerImpl.java:594)
>>
>> at
>> org.apache.airavata.persistance.registry.jpa.resources.JobDetailResource.save(JobDetailResource.java:308)
>>
>> ... 13 more
>>
>> Caused by: <openjpa-2.2.0-r422266:1244990 fatal store error>
>> org.apache.openjpa.persistence.EntityExistsException: The transaction has
>> been rolled back.  See the nested exceptions for details on the errors that
>> occurred.
>>
>> FailedObject:
>> org.apache.airavata.persistance.registry.jpa.model.JobDetail@6f1d32ff
>>
>> at
>> org.apache.openjpa.kernel.BrokerImpl.newFlushException(BrokerImpl.java:2337)
>>
>> at org.apache.openjpa.kernel.BrokerImpl.flush(BrokerImpl.java:2174)
>>
>> at org.apache.openjpa.kernel.BrokerImpl.flushSafe(BrokerImpl.java:2072)
>>
>> at
>> org.apache.openjpa.kernel.BrokerImpl.beforeCompletion(BrokerImpl.java:1990)
>>
>> at
>> org.apache.openjpa.kernel.LocalManagedRuntime.commit(LocalManagedRuntime.java:81)
>>
>> at org.apache.openjpa.kernel.BrokerImpl.commit(BrokerImpl.java:1514)
>>
>> at
>> org.apache.openjpa.kernel.DelegatingBroker.commit(DelegatingBroker.java:933)
>>
>> at
>> org.apache.openjpa.persistence.EntityManagerImpl.commit(EntityManagerImpl.java:570)
>>
>> ... 14 more
>>
>> Caused by: <openjpa-2.2.0-r422266:1244990 fatal store error>
>> org.apache.openjpa.persistence.EntityExistsException: Column
>> 'JOB_DESCRIPTION' cannot be null {prepstmnt 1744538295
>>
>> INSERT INTO JOB_DETAIL (JOB_ID, TASK_ID, COMPUTE_RESOURCE_CONSUMED,
>>
>>         CREATION_TIME, JOB_DESCRIPTION, JOBNAME, WORKING_DIR)
>>
>>     VALUES (?, ?, ?, ?, ?, ?, ?)
>>
>> [params=(String) none, (String)
>> tempNode_56f41083-10be-4161-8803-ee1106bd3f54, (null) null, (Timestamp)
>> 2015-08-17 06:49:01.613, (null) null, (String) A516147113, (null) null]}
>> [code=1048, state=23000]
>>
>> FailedObject:
>> org.apache.airavata.persistance.registry.jpa.model.JobDetail@6f1d32ff
>>
>> at org.apache.openjpa.jdbc.sql.DBDictionary.narrow(DBDictionary.java:4903)
>>
>> at
>> org.apache.openjpa.jdbc.sql.DBDictionary.newStoreException(DBDictionary.java:4878)
>>
>> at
>> org.apache.openjpa.jdbc.sql.SQLExceptions.getStore(SQLExceptions.java:136)
>>
>> at
>> org.apache.openjpa.jdbc.sql.SQLExceptions.getStore(SQLExceptions.java:78)
>>
>> at
>> org.apache.openjpa.jdbc.kernel.PreparedStatementManagerImpl.flushAndUpdate(PreparedStatementManagerImpl.java:143)
>>
>> at
>> org.apache.openjpa.jdbc.kernel.BatchingPreparedStatementManagerImpl.flushAndUpdate(BatchingPreparedStatementManagerImpl.java:79)
>>
>> at
>> org.apache.openjpa.jdbc.kernel.PreparedStatementManagerImpl.flushInternal(PreparedStatementManagerImpl.java:99)
>>
>> at
>> org.apache.openjpa.jdbc.kernel.PreparedStatementManagerImpl.flush(PreparedStatementManagerImpl.java:87)
>>
>> at
>> org.apache.openjpa.jdbc.kernel.ConstraintUpdateManager.flush(ConstraintUpdateManager.java:550)
>>
>> at
>> org.apache.openjpa.jdbc.kernel.ConstraintUpdateManager.flush(ConstraintUpdateManager.java:106)
>>
>> at
>> org.apache.openjpa.jdbc.kernel.BatchingConstraintUpdateManager.flush(BatchingConstraintUpdateManager.java:59)
>>
>> at
>> org.apache.openjpa.jdbc.kernel.AbstractUpdateManager.flush(AbstractUpdateManager.java:103)
>>
>> at
>> org.apache.openjpa.jdbc.kernel.AbstractUpdateManager.flush(AbstractUpdateManager.java:76)
>>
>> at
>> org.apache.openjpa.jdbc.kernel.JDBCStoreManager.flush(JDBCStoreManager.java:713)
>>
>> at
>> org.apache.openjpa.kernel.DelegatingStoreManager.flush(DelegatingStoreManager.java:131)
>>
>> ... 21 more
>>
>> Caused by: org.apache.openjpa.lib.jdbc.ReportingSQLException: Column
>> 'JOB_DESCRIPTION' cannot be null {prepstmnt 1744538295
>>
>> INSERT INTO JOB_DETAIL (JOB_ID, TASK_ID, COMPUTE_RESOURCE_CONSUMED,
>>
>>         CREATION_TIME, JOB_DESCRIPTION, JOBNAME, WORKING_DIR)
>>
>>     VALUES (?, ?, ?, ?, ?, ?, ?)
>>
>> [params=(String) none, (String)
>> tempNode_56f41083-10be-4161-8803-ee1106bd3f54, (null) null, (Timestamp)
>> 2015-08-17 06:49:01.613, (null) null, (String) A516147113, (null) null]}
>> [code=1048, state=23000]
>>
>> at
>> org.apache.openjpa.lib.jdbc.LoggingConnectionDecorator.wrap(LoggingConnectionDecorator.java:247)
>>
>> at
>> org.apache.openjpa.lib.jdbc.LoggingConnectionDecorator.wrap(LoggingConnectionDecorator.java:223)
>>
>> at
>> org.apache.openjpa.lib.jdbc.LoggingConnectionDecorator.access$1000(LoggingConnectionDecorator.java:72)
>>
>> at
>> org.apache.openjpa.lib.jdbc.LoggingConnectionDecorator$LoggingConnection$LoggingPreparedStatement.executeUpdate(LoggingConnectionDecorator.java:1162)
>>
>> at
>> org.apache.openjpa.lib.jdbc.DelegatingPreparedStatement.executeUpdate(DelegatingPreparedStatement.java:272)
>>
>> at
>> org.apache.openjpa.jdbc.kernel.JDBCStoreManager$CancelPreparedStatement.executeUpdate(JDBCStoreManager.java:1741)
>>
>> at
>> org.apache.openjpa.jdbc.kernel.PreparedStatementManagerImpl.executeUpdate(PreparedStatementManagerImpl.java:267)
>>
>> at
>> org.apache.openjpa.jdbc.kernel.PreparedStatementManagerImpl.flushAndUpdate(PreparedStatementManagerImpl.java:118)
>>
>> ... 31 more
>>
>> 2015-08-17 06:49:01,726 [pool-8-thread-56] INFO
>> org.apache.airavata.gfac.core.monitor.AiravataWorkflowNodeStatusUpdator  -
>> expId - dimuthu_experiment_gau_11_6e6ffc70-5dd2-4a9f-94b6-8cd6e672ec08:
>> Updating workflow node status for
>> tempNode_20c62522-62c4-4342-81d8-9541dbf13862:FAILED
>>
>> 2015-08-17 06:49:02,129 [pool-8-thread-56] INFO
>> org.apache.airavata.messaging.core.impl.RabbitMQStatusPublisher  -
>> Publishing status to rabbitmq...
>>
>> 2015-08-17 06:49:03,300 [pool-8-thread-56] INFO
>> org.apache.airavata.api.server.listener.AiravataExperimentStatusUpdator  -
>> Updating the experiment status of experiment:
>> dimuthu_experiment_gau_11_6e6ffc70-5dd2-4a9f-94b6-8cd6e672ec08 to FAILED
>>
>> 2015-08-17 06:49:03,368 [pool-8-thread-56] INFO
>> org.apache.airavata.messaging.core.impl.RabbitMQStatusPublisher  -
>> Publishing status to rabbitmq...
>>
>> 2015-08-17 06:49:03,376 [pool-8-thread-56] INFO
>> org.apache.airavata.api.server.listener.AiravataExperimentStatusUpdator  -
>> Clean up task - Acknowledging delivery Tag - 93
>>
>> 2015-08-17 06:49:03,611 [pool-8-thread-56] ERROR
>> org.apache.airavata.gfac.GFacException  - Error while executing provider
>> org.apache.airavata.gfac.ssh.provider.impl.SSHProvider functionality.
>>
>> org.apache.airavata.gfac.GFacException: Error while executing provider
>> org.apache.airavata.gfac.ssh.provider.impl.SSHProvider functionality.
>>
>> at
>> org.apache.airavata.gfac.core.cpi.BetterGfacImpl.executeProvider(BetterGfacImpl.java:844)
>>
>> at
>> org.apache.airavata.gfac.core.cpi.BetterGfacImpl.invokeProviderExecute(BetterGfacImpl.java:753)
>>
>> at
>> org.apache.airavata.gfac.core.cpi.BetterGfacImpl.launch(BetterGfacImpl.java:703)
>>
>> at
>> org.apache.airavata.gfac.core.cpi.BetterGfacImpl.submitJob(BetterGfacImpl.java:492)
>>
>> at
>> org.apache.airavata.gfac.core.cpi.BetterGfacImpl.submitJob(BetterGfacImpl.java:183)
>>
>> at
>> org.apache.airavata.gfac.core.utils.InputHandlerWorker.run(InputHandlerWorker.java:47)
>>
>> at
>> java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1142)
>>
>> at
>> java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:617)
>>
>> at java.lang.Thread.run(Thread.java:745)
>>
>> Caused by: org.apache.airavata.gfac.core.provider.GFacProviderException:
>> Error persisting job statusError while adding JOB_DETAIL
>>
>> at
>> org.apache.airavata.gfac.ssh.provider.impl.SSHProvider.execute(SSHProvider.java:231)
>>
>> at
>> org.apache.airavata.gfac.core.cpi.BetterGfacImpl.executeProvider(BetterGfacImpl.java:842)
>>
>> ... 8 more
>>
>> Caused by: org.apache.airavata.gfac.GFacException: Error persisting job
>> statusError while adding JOB_DETAIL
>>
>> at
>> org.apache.airavata.gfac.core.utils.GFacUtils.saveJobStatus(GFacUtils.java:242)
>>
>> at
>> org.apache.airavata.gfac.ssh.provider.impl.SSHProvider.execute(SSHProvider.java:215)
>>
>> ... 9 more
>>
>> Caused by: org.apache.airavata.registry.cpi.RegistryException: Error
>> while adding JOB_DETAIL
>>
>> at
>> org.apache.airavata.persistance.registry.jpa.impl.RegistryImpl.add(RegistryImpl.java:182)
>>
>> at
>> org.apache.airavata.gfac.core.utils.GFacUtils.saveJobStatus(GFacUtils.java:232)
>>
>> ... 10 more
>>
>> Caused by: org.apache.airavata.registry.cpi.RegistryException:
>> org.apache.airavata.registry.cpi.RegistryException:
>> <openjpa-2.2.0-r422266:1244990 fatal store error>
>> org.apache.openjpa.persistence.RollbackException: The transaction has been
>> rolled back.  See the nested exceptions for details on the errors that
>> occurred.
>>
>> FailedObject:
>> org.apache.airavata.persistance.registry.jpa.model.JobDetail@6f1d32ff
>>
>> at
>> org.apache.airavata.persistance.registry.jpa.impl.ExperimentRegistry.addJobDetails(ExperimentRegistry.java:1231)
>>
>> at
>> org.apache.airavata.persistance.registry.jpa.impl.RegistryImpl.add(RegistryImpl.java:157)
>>
>> ... 11 more
>>
>> Caused by: org.apache.airavata.registry.cpi.RegistryException:
>> <openjpa-2.2.0-r422266:1244990 fatal store error>
>> org.apache.openjpa.persistence.RollbackException: The transaction has been
>> rolled back.  See the nested exceptions for details on the errors that
>> occurred.
>>
>> FailedObject:
>> org.apache.airavata.persistance.registry.jpa.model.JobDetail@6f1d32ff
>>
>> at
>> org.apache.airavata.persistance.registry.jpa.resources.JobDetailResource.save(JobDetailResource.java:312)
>>
>> at
>> org.apache.airavata.persistance.registry.jpa.impl.ExperimentRegistry.addJobDetails(ExperimentRegistry.java:1203)
>>
>> ... 12 more
>>
>> Caused by: <openjpa-2.2.0-r422266:1244990 fatal store error>
>> org.apache.openjpa.persistence.RollbackException: The transaction has been
>> rolled back.  See the nested exceptions for details on the errors that
>> occurred.
>>
>> FailedObject:
>> org.apache.airavata.persistance.registry.jpa.model.JobDetail@6f1d32ff
>>
>> at
>> org.apache.openjpa.persistence.EntityManagerImpl.commit(EntityManagerImpl.java:594)
>>
>> at
>> org.apache.airavata.persistance.registry.jpa.resources.JobDetailResource.save(JobDetailResource.java:308)
>>
>> ... 13 more
>>
>> Caused by: <openjpa-2.2.0-r422266:1244990 fatal store error>
>> org.apache.openjpa.persistence.EntityExistsException: The transaction has
>> been rolled back.  See the nested exceptions for details on the errors that
>> occurred.
>>
>> FailedObject:
>> org.apache.airavata.persistance.registry.jpa.model.JobDetail@6f1d32ff
>>
>> at
>> org.apache.openjpa.kernel.BrokerImpl.newFlushException(BrokerImpl.java:2337)
>>
>> at org.apache.openjpa.kernel.BrokerImpl.flush(BrokerImpl.java:2174)
>>
>> at org.apache.openjpa.kernel.BrokerImpl.flushSafe(BrokerImpl.java:2072)
>>
>> at
>> org.apache.openjpa.kernel.BrokerImpl.beforeCompletion(BrokerImpl.java:1990)
>>
>> at
>> org.apache.openjpa.kernel.LocalManagedRuntime.commit(LocalManagedRuntime.java:81)
>>
>> at org.apache.openjpa.kernel.BrokerImpl.commit(BrokerImpl.java:1514)
>>
>> at
>> org.apache.openjpa.kernel.DelegatingBroker.commit(DelegatingBroker.java:933)
>>
>> at
>> org.apache.openjpa.persistence.EntityManagerImpl.commit(EntityManagerImpl.java:570)
>>
>> ... 14 more
>>
>> Caused by: <openjpa-2.2.0-r422266:1244990 fatal store error>
>> org.apache.openjpa.persistence.EntityExistsException: Column
>> 'JOB_DESCRIPTION' cannot be null {prepstmnt 1744538295
>>
>> INSERT INTO JOB_DETAIL (JOB_ID, TASK_ID, COMPUTE_RESOURCE_CONSUMED,
>>
>>         CREATION_TIME, JOB_DESCRIPTION, JOBNAME, WORKING_DIR)
>>
>>     VALUES (?, ?, ?, ?, ?, ?, ?)
>>
>> [params=(String) none, (String)
>> tempNode_56f41083-10be-4161-8803-ee1106bd3f54, (null) null, (Timestamp)
>> 2015-08-17 06:49:01.613, (null) null, (String) A516147113, (null) null]}
>> [code=1048, state=23000]
>>
>> FailedObject:
>> org.apache.airavata.persistance.registry.jpa.model.JobDetail@6f1d32ff
>>
>> at org.apache.openjpa.jdbc.sql.DBDictionary.narrow(DBDictionary.java:4903)
>>
>> at
>> org.apache.openjpa.jdbc.sql.DBDictionary.newStoreException(DBDictionary.java:4878)
>>
>> at
>> org.apache.openjpa.jdbc.sql.SQLExceptions.getStore(SQLExceptions.java:136)
>>
>> at
>> org.apache.openjpa.jdbc.sql.SQLExceptions.getStore(SQLExceptions.java:78)
>>
>> at
>> org.apache.openjpa.jdbc.kernel.PreparedStatementManagerImpl.flushAndUpdate(PreparedStatementManagerImpl.java:143)
>>
>> at
>> org.apache.openjpa.jdbc.kernel.BatchingPreparedStatementManagerImpl.flushAndUpdate(BatchingPreparedStatementManagerImpl.java:79)
>>
>> at
>> org.apache.openjpa.jdbc.kernel.PreparedStatementManagerImpl.flushInternal(PreparedStatementManagerImpl.java:99)
>>
>> at
>> org.apache.openjpa.jdbc.kernel.PreparedStatementManagerImpl.flush(PreparedStatementManagerImpl.java:87)
>>
>> at
>> org.apache.openjpa.jdbc.kernel.ConstraintUpdateManager.flush(ConstraintUpdateManager.java:550)
>>
>> at
>> org.apache.openjpa.jdbc.kernel.ConstraintUpdateManager.flush(ConstraintUpdateManager.java:106)
>>
>> at
>> org.apache.openjpa.jdbc.kernel.BatchingConstraintUpdateManager.flush(BatchingConstraintUpdateManager.java:59)
>>
>> at
>> org.apache.openjpa.jdbc.kernel.AbstractUpdateManager.flush(AbstractUpdateManager.java:103)
>>
>> at
>> org.apache.openjpa.jdbc.kernel.AbstractUpdateManager.flush(AbstractUpdateManager.java:76)
>>
>> at
>> org.apache.openjpa.jdbc.kernel.JDBCStoreManager.flush(JDBCStoreManager.java:713)
>>
>> at
>> org.apache.openjpa.kernel.DelegatingStoreManager.flush(DelegatingStoreManager.java:131)
>>
>> ... 21 more
>>
>> Caused by: org.apache.openjpa.lib.jdbc.ReportingSQLException: Column
>> 'JOB_DESCRIPTION' cannot be null {prepstmnt 1744538295
>>
>> INSERT INTO JOB_DETAIL (JOB_ID, TASK_ID, COMPUTE_RESOURCE_CONSUMED,
>>
>>         CREATION_TIME, JOB_DESCRIPTION, JOBNAME, WORKING_DIR)
>>
>>     VALUES (?, ?, ?, ?, ?, ?, ?)
>>
>> [params=(String) none, (String)
>> tempNode_56f41083-10be-4161-8803-ee1106bd3f54, (null) null, (Timestamp)
>> 2015-08-17 06:49:01.613, (null) null, (String) A516147113, (null) null]}
>> [code=1048, state=23000]
>>
>> at
>> org.apache.openjpa.lib.jdbc.LoggingConnectionDecorator.wrap(LoggingConnectionDecorator.java:247)
>>
>> at
>> org.apache.openjpa.lib.jdbc.LoggingConnectionDecorator.wrap(LoggingConnectionDecorator.java:223)
>>
>> at
>> org.apache.openjpa.lib.jdbc.LoggingConnectionDecorator.access$1000(LoggingConnectionDecorator.java:72)
>>
>> at
>> org.apache.openjpa.lib.jdbc.LoggingConnectionDecorator$LoggingConnection$LoggingPreparedStatement.executeUpdate(LoggingConnectionDecorator.java:1162)
>>
>> at
>> org.apache.openjpa.lib.jdbc.DelegatingPreparedStatement.executeUpdate(DelegatingPreparedStatement.java:272)
>>
>> at
>> org.apache.openjpa.jdbc.kernel.JDBCStoreManager$CancelPreparedStatement.executeUpdate(JDBCStoreManager.java:1741)
>>
>> at
>> org.apache.openjpa.jdbc.kernel.PreparedStatementManagerImpl.executeUpdate(PreparedStatementManagerImpl.java:267)
>>
>> at
>> org.apache.openjpa.jdbc.kernel.PreparedStatementManagerImpl.flushAndUpdate(PreparedStatementManagerImpl.java:118)
>>
>> ... 31 more
>>
>> 2015-08-17 06:49:03,692 [pool-8-thread-56] ERROR
>> org.apache.airavata.gfac.GFacException  - Error launching the Job
>>
>> org.apache.airavata.gfac.GFacException: Error while executing provider
>> org.apache.airavata.gfac.ssh.provider.impl.SSHProvider functionality.
>>
>> at
>> org.apache.airavata.gfac.core.cpi.BetterGfacImpl.launch(BetterGfacImpl.java:743)
>>
>> at
>> org.apache.airavata.gfac.core.cpi.BetterGfacImpl.submitJob(BetterGfacImpl.java:492)
>>
>> at
>> org.apache.airavata.gfac.core.cpi.BetterGfacImpl.submitJob(BetterGfacImpl.java:183)
>>
>>

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