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From Shameera Rathnayaka <shameerai...@gmail.com>
Subject Re: Airavata Docker Available !!
Date Mon, 06 Jul 2015 18:40:20 GMT
Hi Pankaj,

On Mon, Jul 6, 2015 at 12:10 PM Pankaj Saha <psaha4@binghamton.edu> wrote:

> Hey Shameera,
> what about the PATH variable? If you see my dockerfile I have commented
> the ENV for the JAVA_HOME and PATH. It did not work for me.
>

Did you used the docker command that I provided above? if you use it you
can remove ENV PATH .... line . Either you use, the images mentioned by
Lahiru or my suggested commands, still you need to set JAVA_HOME.


> Lahiru suggested to use existing jdk8+maven base image which is better
> idea , what do you think?
>

I have answered for this in one of my previous reply.


>
> On Mon, Jul 6, 2015 at 12:03 PM, Shameera Rathnayaka <
> shameerainfo@gmail.com> wrote:
>
>> Hi Pankaj,
>>
>> you can use following steps on your Dockerfile to install java. After
>> that java will be available anywhere and you don't need to set PATH
>> variable , But you need to set JAVA_HOME variable which is used by airavata
>> start script.
>>
>>
>> # Install prerequisites
>> RUN apt-get update
>> RUN apt-get install -y software-properties-common
>>
>> # Install java8
>> RUN add-apt-repository -y ppa:webupd8team/java
>> RUN apt-get update
>> RUN echo oracle-java8-installer shared/accepted-oracle-license-v1-1
>> select true | sudo /usr/bin/debconf-set-selections
>> RUN apt-get install -y oracle-java8-installer
>>
>> # set JAVA_HOME
>> ENV JAVA_HOME /usr/lib/jvm/java-8-oracle
>>
>>
>> Regards,
>> Shameera.
>>
>> On Mon, Jul 6, 2015 at 11:56 AM Pankaj Saha <psaha4@binghamton.edu>
>> wrote:
>>
>>> Hi Lahiru,
>>>
>>> 1. So you suggest to use the "java8 with maven" as the base image.
>>> dockerfile/java:oracle-java8 is not based on ubuntu image and also its
>>> not official image from oracle, can we use still use that?
>>>
>>> 2. Do you suggest to put only the executables for airavata inside the
>>> docker image? Does that mean docker file will copy the local host machine's
>>> airavata executable files to the docker image through ADD directive?
>>> So I will build the airavata source code locally through maven and then
>>> put that inside the container image.
>>>
>>> 3. One thing that I could not able to do was changing the properties
>>> values for different port and server ips when the containers starts. I was
>>> trying to run a startup shell script which can do the required changes and
>>> then kick start the airavat-server.sh file.
>>> problem was  airavata-server.properties need apiserver.server.host =
>>> current running containers ip address. Can you suggest some better way to
>>> achieve this through shell script.
>>>
>>> Thanks
>>> Pankaj
>>>
>>>
>>>
>>> On Mon, Jul 6, 2015 at 11:30 AM, Lahiru Ginnaliya Gamathige <
>>> glahiru@gmail.com> wrote:
>>>
>>>> Hi Pankaj,
>>>>
>>>> I had a quick look. I think you can replace all the code to install
>>>> java and maven if you use this image [1] or at least java-8 image.
>>>>
>>>> I think its not necessary to build airavata inside the dockerfile, you
>>>> can just assume its built in host machine and you just have to put required
>>>> executables in to the docker image.
>>>> When you create he image maven and source code it not necessary at all.
>>>> Docker image should only contain required binaries, source code doesn't
>>>> have to in the image.
>>>>
>>>> [1]
>>>> https://registry.hub.docker.com/u/jamesdbloom/docker-java8-maven/dockerfile/
>>>>
>>>> On Mon, Jul 6, 2015 at 8:13 AM, Pankaj Saha <psaha4@binghamton.edu>
>>>> wrote:
>>>>
>>>>> I am so sorry , I have no intention to hide any docker code.I am
>>>>> attaching the docker files here.I have never done git check in and trying
>>>>> to upload files and its not working. I am trying to understand the git
pull
>>>>> request/setting up git directory etc.
>>>>>
>>>>> My apology if I unnecessary delayed it.
>>>>>
>>>>>
>>>>>
>>>>> On Mon, Jul 6, 2015 at 10:51 AM, Suresh Marru <smarru@apache.org>
>>>>> wrote:
>>>>>
>>>>>> Hi Pankaj,
>>>>>>
>>>>>> Open source software can never be final. Once the software is final,
>>>>>> the community is dead, because there is nothing for anyone to do.
An
>>>>>> important aspect for all the GSoC students to embrace is, these are
not
>>>>>> academic projects where you submit the final code. You are supposed
to
>>>>>> commit every few hours of code, you need to do the development in
open. We
>>>>>> have been lenient on this so far, but you have been holding off the
docker
>>>>>> work little too long. Please do commit the docker files in as in
condition.
>>>>>> Thats the only way you can engage others, otherwise you will loose
everyone
>>>>>> interest.
>>>>>>
>>>>>> Suresh
>>>>>>
>>>>>> On Mon, Jul 6, 2015 at 10:42 AM, Lahiru Ginnaliya Gamathige <
>>>>>> glahiru@gmail.com> wrote:
>>>>>>
>>>>>>> Not sure what is the big deal here, Why don't you create a pull
>>>>>>> request and every one can review it. It doesn't have to be finalized
at
>>>>>>> all. People will comment and you can follow the comments and
after multiple
>>>>>>> reviews we can  move ti to the the code base.
>>>>>>>
>>>>>>> I propose to create a folder struction like this and put the
docker
>>>>>>> files.
>>>>>>>
>>>>>>> airavata/deploy/thrift, airavata/deploy/rabbitmq,
>>>>>>> airavata/deploy/zookeeper. Create a directory for every image
you build
>>>>>>> with proper naming and add the Dockerfile and other scripts if
there's any.
>>>>>>>
>>>>>>> Lahiru
>>>>>>>
>>>>>>> On Mon, Jul 6, 2015 at 7:03 AM, Pankaj Saha <psaha4@binghamton.edu>
>>>>>>> wrote:
>>>>>>>
>>>>>>>> This docker file is not final yet as we have to automate
the
>>>>>>>> environment variable to replace the properties file.
>>>>>>>> I believe in a hangout session we can walk through and fix
this.
>>>>>>>>
>>>>>>>> On Mon, Jul 6, 2015 at 9:58 AM, Shameera Rathnayaka <
>>>>>>>> shameerainfo@gmail.com> wrote:
>>>>>>>>
>>>>>>>>> Hi Pankaj,
>>>>>>>>>
>>>>>>>>> Let't do this via Apache way, upload these files to publicly
>>>>>>>>> accessible place (as i mentioned in my previous reply)
then invite everyone
>>>>>>>>> to review it.
>>>>>>>>>
>>>>>>>>> Regards,
>>>>>>>>> Shameera.
>>>>>>>>>
>>>>>>>>> On Mon, Jul 6, 2015 at 9:44 AM Pankaj Saha <psaha4@binghamton.edu>
>>>>>>>>> wrote:
>>>>>>>>>
>>>>>>>>>> Hi Shameera,
>>>>>>>>>> Please find the attached Dockerfile for Airavata
Server.
>>>>>>>>>> Please suggest changes.
>>>>>>>>>>
>>>>>>>>>>
>>>>>>>>>> On Thu, Jul 2, 2015 at 5:50 PM, Shameera Rathnayaka
<
>>>>>>>>>> shameerainfo@gmail.com> wrote:
>>>>>>>>>>
>>>>>>>>>>> Hi Pankaj,
>>>>>>>>>>>
>>>>>>>>>>> Yes please share your works with community. Do
you have specific
>>>>>>>>>>> location to commit your works? If not you can
use this location
>>>>>>>>>>> https://github.com/apache/airavata-sandbox. 
Let's try to
>>>>>>>>>>>  track the changes with VCS.
>>>>>>>>>>>
>>>>>>>>>>> @Suresh do we have specific location for this
time gsoc
>>>>>>>>>>> students?
>>>>>>>>>>>
>>>>>>>>>>> Thanks,
>>>>>>>>>>> Shameera.
>>>>>>>>>>>
>>>>>>>>>>> On Thu, Jul 2, 2015 at 5:24 PM Pankaj Saha <
>>>>>>>>>>> psaha4@binghamton.edu> wrote:
>>>>>>>>>>>
>>>>>>>>>>>> Hi Shameera
>>>>>>>>>>>> Yes we can see the containers ip they way
you suggested. What I
>>>>>>>>>>>> mentioned is another way in case you are
already inside the container.
>>>>>>>>>>>>
>>>>>>>>>>>> Regarding java path variable yes we can do
that with ENV in
>>>>>>>>>>>> docker file. It was throwing some errors
so i just commented that in the
>>>>>>>>>>>> docker file.
>>>>>>>>>>>>
>>>>>>>>>>>> I will send you the docker file in another
email then we can go
>>>>>>>>>>>> through together  to improve it.
>>>>>>>>>>>>
>>>>>>>>>>>> I was trying mesos today and didnt have time
to fix that. We
>>>>>>>>>>>> can do it later as we are already running
late for the mesos implementation.
>>>>>>>>>>>>
>>>>>>>>>>>> Thanks
>>>>>>>>>>>>
>>>>>>>>>>>>
>>>>>>>>>>>> Pankaj
>>>>>>>>>>>>  On 02-Jul-2015 5:12 PM, "Shameera Rathnayaka"
<
>>>>>>>>>>>> shameerainfo@gmail.com> wrote:
>>>>>>>>>>>>
>>>>>>>>>>>>> Hi Pankaj,
>>>>>>>>>>>>>
>>>>>>>>>>>>> See my comments inline.
>>>>>>>>>>>>>
>>>>>>>>>>>>>
>>>>>>>>>>>>>> docker attach server
>>>>>>>>>>>>>>>
>>>>>>>>>>>>>> awk 'NR==1 {print $1}' /etc/hosts
   ---- note the ip address
>>>>>>>>>>>>>>> of the running container
>>>>>>>>>>>>>>
>>>>>>>>>>>>>>
>>>>>>>>>>>>> can't we use "docker inspect --format
'{{
>>>>>>>>>>>>> .NetworkSettings.IPAddress }}' server
" to get airavata server docker
>>>>>>>>>>>>> container ip ?
>>>>>>>>>>>>>
>>>>>>>>>>>>>
>>>>>>>>>>>>>>
>>>>>>>>>>>>>>
>>>>>>>>>>>>>> pico airavata-server.properties
>>>>>>>>>>>>>>
>>>>>>>>>>>>>>
>>>>>>>>>>>>>> Replaces the below text as suggested
below
>>>>>>>>>>>>>> apiserver.server.host= *<current
containers ip address>*
>>>>>>>>>>>>>> default.registry.gateway=*default*
>>>>>>>>>>>>>> rabbitmq.broker.url=amqp://*<rabbit
MQ's ip address>*:5672
>>>>>>>>>>>>>> save changes.
>>>>>>>>>>>>>>
>>>>>>>>>>>>>> pico /etc/bash.bashrc
>>>>>>>>>>>>>>
>>>>>>>>>>>>>>
>>>>>>>>>>>>>> add below lines at the end
>>>>>>>>>>>>>>
>>>>>>>>>>>>>> #JAVA_HOME
>>>>>>>>>>>>>>> JAVA_HOME=/opt/jdk/jdk1.8.0_05
>>>>>>>>>>>>>>>
>>>>>>>>>>>>>>
>>>>>>>>>>>>> You can improve you docker file to add
this variables using
>>>>>>>>>>>>> ENV command.
>>>>>>>>>>>>>
>>>>>>>>>>>>>
>>>>>>>>>>>>>> export JAVA_HOME
>>>>>>>>>>>>>>> PATH=$JAVA_HOME/bin:$PATH
>>>>>>>>>>>>>>> export PATH
>>>>>>>>>>>>>>
>>>>>>>>>>>>>> save changes.
>>>>>>>>>>>>>>
>>>>>>>>>>>>>
>>>>>>>>>>>>> How you install java 8?, There is a way
to install java on
>>>>>>>>>>>>> docker which automatically available
in PATH variable. You don't have to
>>>>>>>>>>>>> set it here. It is good if you can show
us the Dockerfiles then we can
>>>>>>>>>>>>> review those files. is it available online
?
>>>>>>>>>>>>>
>>>>>>>>>>>>> Thanks,
>>>>>>>>>>>>> Shameera.
>>>>>>>>>>>>>
>>>>>>>>>>>>
>>>>>>>>>>
>>>>>>>>
>>>>>>>
>>>>>>
>>>>>
>>>>
>>>
>

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