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From "Suresh Marru (JIRA)" <j...@apache.org>
Subject [jira] [Updated] (AIRAVATA-467) Allow user to set parameter options like -p <value> -m <value> to run jobs with GFAC
Date Thu, 31 Jul 2014 00:05:39 GMT

     [ https://issues.apache.org/jira/browse/AIRAVATA-467?page=com.atlassian.jira.plugin.system.issuetabpanels:all-tabpanel
]

Suresh Marru updated AIRAVATA-467:
----------------------------------

    Fix Version/s:     (was: 0.13)
                   0.14

> Allow user to set parameter options like -p <value> -m <value> to run jobs
with GFAC
> ------------------------------------------------------------------------------------
>
>                 Key: AIRAVATA-467
>                 URL: https://issues.apache.org/jira/browse/AIRAVATA-467
>             Project: Airavata
>          Issue Type: Improvement
>          Components: GFac
>    Affects Versions: 0.4-INCUBATING
>            Reporter: Raminderjeet Singh
>            Assignee: Lahiru Gunathilake
>             Fix For: 0.14
>
>
> Some of the application need options before the parameter to run as shown in example
below. This requirement is true for different GFAC providers. 
> /home1/01437/ogce/biodrugscreen/bdsreening.py  -p <receptor.pdb> -m <receptor.mol2>
-q <receptor.pdbqt> -l <lig.mol2> -x <cx> -y <cy> -z <cz> -u
<docked.mol2> -v <scores>



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