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From Suresh Marru <sma...@apache.org>
Subject Re: Error during start up of Airavata
Date Mon, 07 Jul 2014 13:25:16 GMT
Looks like a missing dependency. Can u take a pull and retry? 

Suresh

On Jul 7, 2014, at 9:19 AM, Marlon Pierce <marpierc@iu.edu> wrote:

> Same problems for me.
> 
> On 7/7/14, 9:08 AM, Lahiru Gunathilake wrote:
>> I get this error during building,
>> 
>> [ERROR] Failed to execute goal
>> org.apache.maven.plugins:maven-compiler-plugin:3.1:compile
>> (default-compile) on project airavata-client-api: Compilation failure:
>> Compilation failure:
>> [ERROR]
>> /Users/lahirugunathilake/work/airavata/git/airavata/modules/airavata-client/src/main/java/org/apache/airavata/client/tools/DocumentCreatorNew.java:[28,31]
>> package org.apache.airavata.api does not exist
>> [ERROR]
>> /Users/lahirugunathilake/work/airavata/git/airavata/modules/airavata-client/src/main/java/org/apache/airavata/client/tools/DocumentCreatorNew.java:[56,21]
>> package Airavata does not exist
>> [ERROR]
>> /Users/lahirugunathilake/work/airavata/git/airavata/modules/airavata-client/src/main/java/org/apache/airavata/client/tools/DocumentCreatorNew.java:[59,39]
>> package Airavata does not exist
>> [ERROR]
>> /Users/lahirugunathilake/work/airavata/git/airavata/modules/airavata-client/src/main/java/org/apache/airavata/client/tools/DocumentCreatorNew.java:[28,31]
>> package org.apache.airavata.api does not exist
>> [ERROR]
>> /Users/lahirugunathilake/work/airavata/git/airavata/modules/airavata-client/src/main/java/org/apache/airavata/client/tools/DocumentCreatorNew.java:[56,21]
>> package Airavata does not exist
>> [ERROR]
>> /Users/lahirugunathilake/work/airavata/git/airavata/modules/airavata-client/src/main/java/org/apache/airavata/client/tools/DocumentCreatorNew.java:[59,39]
>> package Airavata does not exist
>> [ERROR] -> [Help 1]
>> [ERROR]
>> [ERROR] To see the full stack trace of the errors, re-run Maven with the -e
>> switch.
>> [ERROR] Re-run Maven using the -X switch to enable full debug logging.
>> [ERROR]
>> [ERROR] For more information about the errors and possible solutions,
>> please read the following articles:
>> [ERROR] [Help 1]
>> http://cwiki.apache.org/confluence/display/MAVEN/MojoFailureException
>> [ERROR]
>> [ERROR] After correcting the problems, you can resume the build with the
>> command
>> [ERROR]   mvn <goals> -rf :airavata-client-api
>> 
>> 
>> 
>> On Mon, Jul 7, 2014 at 9:04 AM, Lahiru Gunathilake <glahiru@gmail.com>
>> wrote:
>> 
>>> Hi Saminda,
>>> 
>>> I got more updates just now. I will build again and see.
>>> 
>>> Thanks
>>> Lahiru
>>> 
>>> 
>>> On Mon, Jul 7, 2014 at 8:45 AM, Saminda Wijeratne <samindaw@gmail.com>
>>> wrote:
>>> 
>>>> hmm... I thought I fixed this issue yesterday. Do you have the latest
>>>> trunk?
>>>> 
>>>> 
>>>> On Mon, Jul 7, 2014 at 8:35 AM, Lahiru Gunathilake <glahiru@gmail.com>
>>>> wrote:
>>>> 
>>>>> [ERROR] Error occurred while executing :  /* * * Licensed to the Apache
>>>>> Software Foundation (ASF) under one * or more contributor license
>>>>> agreements.  See the NOTICE file * distributed with this work for
>>>>> additional information * regarding copyright ownership.  The ASF licenses
>>>>> this file * to you under the Apache License, Version 2.0 (the * "License");
>>>>> you may not use this file except in compliance * with the License.  You
may
>>>>> obtain a copy of the License at * *
>>>>> http://www.apache.org/licenses/LICENSE-2.0 * * Unless required by
>>>>> applicable law or agreed to in writing, * software distributed under
the
>>>>> License is distributed on an * "AS IS" BASIS, WITHOUT WARRANTIES OR
>>>>> CONDITIONS OF ANY * KIND, either express or implied.  See the License
for
>>>>> the * specific language governing permissions and limitations * under
the
>>>>> License. * */  /* CREATE TABLE COMPUTE_RESOURCE ( RESOURCE_ID VARCHAR(255),
>>>>> HOST_NAME VARCHAR(255), DESCRIPTION VARCHAR(255),
>>>>> PREFERRED_JOB_SUBMISSION_PROTOCOL VARCHAR(255), PRIMARY KEY(RESOURCE_ID)
)
>>>>> java.lang.Exception: Error occurred while executing :  /* * * Licensed
>>>>> to the Apache Software Foundation (ASF) under one * or more contributor
>>>>> license agreements.  See the NOTICE file * distributed with this work
for
>>>>> additional information * regarding copyright ownership.  The ASF licenses
>>>>> this file * to you under the Apache License, Version 2.0 (the * "License");
>>>>> you may not use this file except in compliance * with the License.  You
may
>>>>> obtain a copy of the License at * *
>>>>> http://www.apache.org/licenses/LICENSE-2.0 * * Unless required by
>>>>> applicable law or agreed to in writing, * software distributed under
the
>>>>> License is distributed on an * "AS IS" BASIS, WITHOUT WARRANTIES OR
>>>>> CONDITIONS OF ANY * KIND, either express or implied.  See the License
for
>>>>> the * specific language governing permissions and limitations * under
the
>>>>> License. * */  /* CREATE TABLE COMPUTE_RESOURCE ( RESOURCE_ID VARCHAR(255),
>>>>> HOST_NAME VARCHAR(255), DESCRIPTION VARCHAR(255),
>>>>> PREFERRED_JOB_SUBMISSION_PROTOCOL VARCHAR(255), PRIMARY KEY(RESOURCE_ID)
)
>>>>>  at
>>>>> org.apache.airavata.api.server.util.DatabaseCreator.executeSQL(DatabaseCreator.java:150)
>>>>> at
>>>>> org.apache.airavata.api.server.util.DatabaseCreator.executeSQLScript(DatabaseCreator.java:286)
>>>>>  at
>>>>> org.apache.airavata.api.server.util.DatabaseCreator.createDatabase(DatabaseCreator.java:234)
>>>>> at
>>>>> org.apache.airavata.api.server.util.DatabaseCreator.createRegistryDatabase(DatabaseCreator.java:62)
>>>>>  at
>>>>> org.apache.airavata.api.server.util.AppCatalogInitUtil.initializeDB(AppCatalogInitUtil.java:80)
>>>>> at
>>>>> org.apache.airavata.api.server.AiravataAPIServer.StartAiravataServer(AiravataAPIServer.java:63)
>>>>>  at
>>>>> org.apache.airavata.api.server.AiravataAPIServer.start(AiravataAPIServer.java:125)
>>>>> at
>>>>> org.apache.airavata.server.ServerMain.startAllServers(ServerMain.java:266)
>>>>>  at
>>>>> org.apache.airavata.server.ServerMain.performServerStart(ServerMain.java:121)
>>>>> at org.apache.airavata.server.ServerMain.main(ServerMain.java:113)
>>>>> Caused by: java.sql.SQLSyntaxErrorException: Lexical error at line 1,
>>>>> column 982.  Encountered: <EOF> after : "".
>>>>> at
>>>>> org.apache.derby.client.am.SQLExceptionFactory40.getSQLException(Unknown
>>>>> Source)
>>>>>  at org.apache.derby.client.am.SqlException.getSQLException(Unknown
>>>>> Source)
>>>>> at org.apache.derby.client.am.Statement.execute(Unknown Source)
>>>>>  at
>>>>> org.apache.airavata.api.server.util.DatabaseCreator.executeSQL(DatabaseCreator.java:122)
>>>>> ... 9 more
>>>>> Caused by: org.apache.derby.client.am.SqlException: Lexical error at
>>>>> line 1, column 982.  Encountered: <EOF> after : "".
>>>>> at org.apache.derby.client.am.Statement.completeSqlca(Unknown Source)
>>>>>  at
>>>>> org.apache.derby.client.net.NetStatementReply.parsePrepareError(Unknown
>>>>> Source)
>>>>> at
>>>>> org.apache.derby.client.net.NetStatementReply.parsePRPSQLSTTreply(Unknown
>>>>> Source)
>>>>>  at
>>>>> org.apache.derby.client.net.NetStatementReply.readPrepareDescribeOutput(Unknown
>>>>> Source)
>>>>> at
>>>>> org.apache.derby.client.net.StatementReply.readPrepareDescribeOutput(Unknown
>>>>> Source)
>>>>>  at
>>>>> org.apache.derby.client.net.NetStatement.readPrepareDescribeOutput_(Unknown
>>>>> Source)
>>>>> at
>>>>> org.apache.derby.client.am.Statement.readPrepareDescribeOutput(Unknown
>>>>> Source)
>>>>>  at org.apache.derby.client.am.Statement.flowExecute(Unknown Source)
>>>>> at org.apache.derby.client.am.Statement.executeX(Unknown Source)
>>>>>  ... 11 more
>>>>> [ERROR] Server Start Error:
>>>>> java.lang.RuntimeException: Database failure
>>>>> at
>>>>> org.apache.airavata.api.server.util.AppCatalogInitUtil.initializeDB(AppCatalogInitUtil.java:87)
>>>>>  at
>>>>> org.apache.airavata.api.server.AiravataAPIServer.StartAiravataServer(AiravataAPIServer.java:63)
>>>>> at
>>>>> org.apache.airavata.api.server.AiravataAPIServer.start(AiravataAPIServer.java:125)
>>>>>  at
>>>>> org.apache.airavata.server.ServerMain.startAllServers(ServerMain.java:266)
>>>>> at
>>>>> org.apache.airavata.server.ServerMain.performServerStart(ServerMain.java:121)
>>>>>  at org.apache.airavata.server.ServerMain.main(ServerMain.java:113)
>>>>> Caused by: java.lang.Exception: Error occurred while executing :  /*
* *
>>>>> Licensed to the Apache Software Foundation (ASF) under one * or more
>>>>> contributor license agreements.  See the NOTICE file * distributed with
>>>>> this work for additional information * regarding copyright ownership.
 The
>>>>> ASF licenses this file * to you under the Apache License, Version 2.0
(the
>>>>> * "License"); you may not use this file except in compliance * with the
>>>>> License.  You may obtain a copy of the License at * *
>>>>> http://www.apache.org/licenses/LICENSE-2.0 * * Unless required by
>>>>> applicable law or agreed to in writing, * software distributed under
the
>>>>> License is distributed on an * "AS IS" BASIS, WITHOUT WARRANTIES OR
>>>>> CONDITIONS OF ANY * KIND, either express or implied.  See the License
for
>>>>> the * specific language governing permissions and limitations * under
the
>>>>> License. * */  /* CREATE TABLE COMPUTE_RESOURCE ( RESOURCE_ID VARCHAR(255),
>>>>> HOST_NAME VARCHAR(255), DESCRIPTION VARCHAR(255),
>>>>> PREFERRED_JOB_SUBMISSION_PROTOCOL VARCHAR(255), PRIMARY KEY(RESOURCE_ID)
)
>>>>>  at
>>>>> org.apache.airavata.api.server.util.DatabaseCreator.executeSQL(DatabaseCreator.java:150)
>>>>> at
>>>>> org.apache.airavata.api.server.util.DatabaseCreator.executeSQLScript(DatabaseCreator.java:286)
>>>>>  at
>>>>> org.apache.airavata.api.server.util.DatabaseCreator.createDatabase(DatabaseCreator.java:234)
>>>>> at
>>>>> org.apache.airavata.api.server.util.DatabaseCreator.createRegistryDatabase(DatabaseCreator.java:62)
>>>>>  at
>>>>> org.apache.airavata.api.server.util.AppCatalogInitUtil.initializeDB(AppCatalogInitUtil.java:80)
>>>>> ... 5 more
>>>>> Caused by: java.sql.SQLSyntaxErrorException: Lexical error at line 1,
>>>>> column 982.  Encountered: <EOF> after : "".
>>>>> at
>>>>> org.apache.derby.client.am.SQLExceptionFactory40.getSQLException(Unknown
>>>>> Source)
>>>>>  at org.apache.derby.client.am.SqlException.getSQLException(Unknown
>>>>> Source)
>>>>> at org.apache.derby.client.am.Statement.execute(Unknown Source)
>>>>>  at
>>>>> org.apache.airavata.api.server.util.DatabaseCreator.executeSQL(DatabaseCreator.java:122)
>>>>> ... 9 more
>>>>> Caused by: org.apache.derby.client.am.SqlException: Lexical error at
>>>>> line 1, column 982.  Encountered: <EOF> after : "".
>>>>> at org.apache.derby.client.am.Statement.completeSqlca(Unknown Source)
>>>>>  at
>>>>> org.apache.derby.client.net.NetStatementReply.parsePrepareError(Unknown
>>>>> Source)
>>>>> at
>>>>> org.apache.derby.client.net.NetStatementReply.parsePRPSQLSTTreply(Unknown
>>>>> Source)
>>>>>  at
>>>>> org.apache.derby.client.net.NetStatementReply.readPrepareDescribeOutput(Unknown
>>>>> Source)
>>>>> at
>>>>> org.apache.derby.client.net.StatementReply.readPrepareDescribeOutput(Unknown
>>>>> Source)
>>>>>  at
>>>>> org.apache.derby.client.net.NetStatement.readPrepareDescribeOutput_(Unknown
>>>>> Source)
>>>>> at
>>>>> org.apache.derby.client.am.Statement.readPrepareDescribeOutput(Unknown
>>>>> Source)
>>>>>  at org.apache.derby.client.am.Statement.flowExecute(Unknown Source)
>>>>> at org.apache.derby.client.am.Statement.executeX(Unknown Source)
>>>>>  ... 11 more
>>>>> [INFO] Initiating client connection, con
>>>>> 
>>>>> --
>>>>> System Analyst Programmer
>>>>> PTI Lab
>>>>> Indiana University
>>>>> 
>>>> 
>>> 
>>> --
>>> System Analyst Programmer
>>> PTI Lab
>>> Indiana University
>>> 
>> 
>> 
> 


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