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From K Yoshimoto <kenn...@sdsc.edu>
Subject Re: [SciGaP-Dev] CIPRES-Airavata integration proposal]]
Date Wed, 30 Jul 2014 21:01:06 GMT


On Wed, Jul 30, 2014 at 04:52:35PM -0400, Marlon Pierce wrote:
> Does it work if you use  mvn -o clean install?

I get a bunch of test failures, with or without -o.  Should I be
concerned about these?

> 
> What do you get when you run ls -tlr 
> ~/.m2/repository/org/apache/airavata/airavata-client-api/0.14-SNAPSHOT/ ?

ls -tlr ~/.m2/repository/org/apache/airavata/airavata-client-api/0.14-SNAPSHOT/
total 12
-rw-rw-r-- 1 john john 231 Jul 30 13:43 resolver-status.properties
-rw-rw-r-- 1 john john 241 Jul 30 13:43 airavata-client-api-0.14-SNAPSHOT.pom.lastUpdated
-rw-rw-r-- 1 john john 241 Jul 30 13:43 airavata-client-api-0.14-SNAPSHOT.jar.lastUpdated

Kenneth

> 
> Mine looks like this:
> 
> mpierce$ ls -tlr 
> ~/.m2/repository/org/apache/airavata/airavata-client-api/0.14-SNAPSHOT/
> total 1432
> -rw-r--r--  1 mpierce  staff    5044 Jul 22 15:28 
> airavata-client-api-0.14-SNAPSHOT.pom
> -rw-r--r--  1 mpierce  staff     241 Jul 30 16:09 
> airavata-client-api-0.14-SNAPSHOT.pom.lastUpdated
> -rw-r--r--  1 mpierce  staff     241 Jul 30 16:09 
> airavata-client-api-0.14-SNAPSHOT.jar.lastUpdated
> -rw-r--r--  1 mpierce  staff     721 Jul 30 16:11 maven-metadata-local.xml
> -rw-r--r--  1 mpierce  staff  704373 Jul 30 16:11 
> airavata-client-api-0.14-SNAPSHOT.jar
> -rw-r--r--  1 mpierce  staff     206 Jul 30 16:11 _maven.repositories
> -rw-r--r--  1 mpierce  staff     231 Jul 30 16:49 resolver-status.properties
> 
> 
> On 7/30/14, 4:45 PM, K Yoshimoto wrote:
> >I get a different error now:
> >
> >java-client-samples$ mvn clean install -U -DskipTests=true -f pom.xml
> >[INFO] Scanning for projects...
> >[INFO]
> >[INFO] 
> >------------------------------------------------------------------------
> >[INFO] Building Airavata Client Samples 0.14-SNAPSHOT
> >[INFO] 
> >------------------------------------------------------------------------
> >Downloading: 
> >http://repository.apache.org/snapshots/org/apache/airavata/airavata-data-models/0.14-SNAPSHOT/maven-metadata.xml
> >Downloading: 
> >http://repository.apache.org/snapshots/org/apache/airavata/airavata-api/0.14-SNAPSHOT/maven-metadata.xml
> >Downloading: 
> >http://repository.apache.org/snapshots/org/apache/airavata/airavata/0.14-SNAPSHOT/maven-metadata.xml
> >Downloading: 
> >http://repository.apache.org/snapshots/org/apache/airavata/airavata-model-utils/0.14-SNAPSHOT/maven-metadata.xml
> >Downloading: 
> >http://repository.apache.org/snapshots/org/apache/airavata/airavata-common-utils/0.14-SNAPSHOT/maven-metadata.xml
> >Downloading: 
> >http://repository.apache.org/snapshots/org/apache/airavata/commons/0.14-SNAPSHOT/maven-metadata.xml
> >Downloading: 
> >http://repository.apache.org/snapshots/org/apache/airavata/airavata-client-api/0.14-SNAPSHOT/maven-metadata.xml
> >Downloading: 
> >http://repository.apache.org/snapshots/org/apache/airavata/airavata-client-api/0.14-SNAPSHOT/airavata-client-api-0.14-SNAPSHOT.pom
> >[WARNING] The POM for 
> >org.apache.airavata:airavata-client-api:jar:0.14-SNAPSHOT is missing, no 
> >dependency information available
> >Downloading: 
> >http://repository.apache.org/snapshots/org/apache/airavata/airavata-gfac-schema-utils/0.14-SNAPSHOT/maven-metadata.xml
> >Downloading: 
> >http://repository.apache.org/snapshots/org/apache/airavata/airavata-jpa-registry/0.14-SNAPSHOT/maven-metadata.xml
> >Downloading: 
> >http://repository.apache.org/snapshots/org/apache/airavata/registry/0.14-SNAPSHOT/maven-metadata.xml
> >Downloading: 
> >http://repository.apache.org/snapshots/org/apache/airavata/airavata-registry-api/0.14-SNAPSHOT/maven-metadata.xml
> >Downloading: 
> >http://repository.apache.org/snapshots/org/apache/airavata/airavata-workflow-execution-context/0.14-SNAPSHOT/maven-metadata.xml
> >Downloading: 
> >http://repository.apache.org/snapshots/org/apache/airavata/airavata-credential-store/0.14-SNAPSHOT/maven-metadata.xml
> >Downloading: 
> >http://repository.apache.org/snapshots/org/apache/airavata/airavata-registry-cpi/0.14-SNAPSHOT/maven-metadata.xml
> >Downloading: 
> >http://repository.apache.org/snapshots/org/apache/airavata/airavata-api-stubs/0.14-SNAPSHOT/maven-metadata.xml
> >Downloading: 
> >http://repository.apache.org/snapshots/org/apache/airavata/airavata-client-configuration/0.14-SNAPSHOT/maven-metadata.xml
> >Downloading: 
> >http://repository.apache.org/snapshots/org/apache/airavata/airavata-configuration/0.14-SNAPSHOT/maven-metadata.xml
> >Downloading: 
> >http://repository.apache.org/snapshots/org/apache/airavata/airavata-client-api/0.14-SNAPSHOT/airavata-client-api-0.14-SNAPSHOT.jar
> >[INFO] 
> >------------------------------------------------------------------------
> >[INFO] BUILD FAILURE
> >[INFO] 
> >------------------------------------------------------------------------
> >[INFO] Total time: 6.780s
> >[INFO] Finished at: Wed Jul 30 13:43:44 PDT 2014
> >[INFO] Final Memory: 8M/148M
> >[INFO] 
> >------------------------------------------------------------------------
> >[ERROR] Failed to execute goal on project airavata-client-samples: Could 
> >not resolve dependencies for project 
> >org.apache.airavata:airavata-client-samples:jar:0.14-SNAPSHOT: Could not 
> >find artifact org.apache.airavata:airavata-client-api:jar:0.14-SNAPSHOT in 
> >apache.snapshots (http://repository.apache.org/snapshots) -> [Help 1]
> >[ERROR]
> >[ERROR] To see the full stack trace of the errors, re-run Maven with the 
> >-e switch.
> >[ERROR] Re-run Maven using the -X switch to enable full debug logging.
> >[ERROR]
> >[ERROR] For more information about the errors and possible solutions, 
> >please read the following articles:
> >[ERROR] [Help 1] 
> >http://cwiki.apache.org/confluence/display/MAVEN/DependencyResolutionException
> >
> >
> >On Wed, Jul 30, 2014 at 04:20:01PM -0400, Marlon Pierce wrote:
> >>Hi Kenneth--
> >>
> >>You should first build the entire Airavata project (mvn clean install at
> >>the top level).  This should fix the missing dependency problems you see
> >>below. You can then do the java-client-samples only build as often as
> >>you want from there.
> >>
> >>I just verified this, but let us know if you have problems. The build
> >>took ~6 minutes on my laptop over wireless, but your first build may
> >>take a little longer as you'll need additional jars.
> >>
> >>Marlon
> >>
> >>On 7/30/14, 4:05 PM, K Yoshimoto wrote:
> >>>I wanted to play a bit more with the existing java client examples,
> >>>in parallel with the new ones that are being written.  I tried
> >>>building them but got an error about missing files.
> >>>This was run from airavata-api/airavata-client-sdks/java-client-samples.
> >>>
> >>>
> >>>mvn clean install -DskipTests=true -f pom.xml[INFO] Scanning for
> >>>projects...
> >>>[INFO]
> >>>------------------------------------------------------------------------
> >>>[INFO] Building Airavata Client Samples
> >>>[INFO]    task-segment: [clean, install]
> >>>[INFO]
> >>>------------------------------------------------------------------------
> >>>[INFO] [clean:clean {execution: default-clean}]
> >>>[debug] execute contextualize
> >>>[INFO] [resources:copy-resources {execution: copy-resources}]
> >>>[INFO] Using 'UTF-8' encoding to copy filtered resources.
> >>>[INFO] skip non existing resourceDirectory
> >>>/media/785F-C62B/scigap/phpclientsamples/airavata/airavata-api/airavata-client-sdks/java-client-samples/src/main/assembly/dist
> >>>[INFO] [remote-resources:process {execution: default}]
> >>>Downloading:
> >>>http://repository.apache.org/snapshots/org/apache/airavata/airavata-data-models/0.14-SNAPSHOT/airavata-data-models-0.14-SNAPSHOT.pom
> >>>[INFO] Unable to find resource
> >>>'org.apache.airavata:airavata-data-models:pom:0.14-SNAPSHOT' in 
> >>>repository
> >>>apache.snapshots (http://repository.apache.org/snapshots)
> >>>Downloading:
> >>>http://repository.apache.org/snapshots/org/apache/airavata/airavata-model-utils/0.14-SNAPSHOT/airavata-model-utils-0.14-SNAPSHOT.pom
> >>>[INFO] Unable to find resource
> >>>'org.apache.airavata:airavata-model-utils:pom:0.14-SNAPSHOT' in 
> >>>repository
> >>>apache.snapshots (http://repository.apache.org/snapshots)
> >>>Downloading:
> >>>http://repository.apache.org/snapshots/org/apache/airavata/airavata-common-utils/0.14-SNAPSHOT/airavata-common-utils-0.14-SNAPSHOT.pom
> >>>[INFO] Unable to find resource
> >>>'org.apache.airavata:airavata-common-utils:pom:0.14-SNAPSHOT' in
> >>>repository apache.snapshots (http://repository.apache.org/snapshots)
> >>>Downloading:
> >>>http://repository.apache.org/snapshots/org/apache/airavata/airavata-client-api/0.14-SNAPSHOT/airavata-client-api-0.14-SNAPSHOT.pom
> >>>[INFO] Unable to find resource
> >>>'org.apache.airavata:airavata-client-api:pom:0.14-SNAPSHOT' in repository
> >>>apache.snapshots (http://repository.apache.org/snapshots)
> >>>Downloading:
> >>>http://repository.apache.org/snapshots/org/apache/airavata/airavata-gfac-schema-utils/0.14-SNAPSHOT/airavata-gfac-schema-utils-0.14-SNAPSHOT.pom
> >>>[INFO] Unable to find resource
> >>>'org.apache.airavata:airavata-gfac-schema-utils:pom:0.14-SNAPSHOT' in
> >>>repository apache.snapshots (http://repository.apache.org/snapshots)
> >>>Downloading:
> >>>http://repository.apache.org/snapshots/org/apache/airavata/airavata-jpa-registry/0.14-SNAPSHOT/airavata-jpa-registry-0.14-SNAPSHOT.pom
> >>>[INFO] Unable to find resource
> >>>'org.apache.airavata:airavata-jpa-registry:pom:0.14-SNAPSHOT' in
> >>>repository apache.snapshots (http://repository.apache.org/snapshots)
> >>>Downloading:
> >>>http://repository.apache.org/snapshots/org/apache/airavata/airavata-api-stubs/0.14-SNAPSHOT/airavata-api-stubs-0.14-SNAPSHOT.pom
> >>>[INFO] Unable to find resource
> >>>'org.apache.airavata:airavata-api-stubs:pom:0.14-SNAPSHOT' in repository
> >>>apache.snapshots (http://repository.apache.org/snapshots)
> >>>Downloading:
> >>>http://repository.apache.org/snapshots/org/apache/airavata/airavata-client-configuration/0.14-SNAPSHOT/airavata-client-configuration-0.14-SNAPSHOT.pom
> >>>[INFO] Unable to find resource
> >>>'org.apache.airavata:airavata-client-configuration:pom:0.14-SNAPSHOT' in
> >>>repository apache.snapshots (http://repository.apache.org/snapshots)
> >>>Downloading:
> >>>http://repository.apache.org/snapshots/org/apache/airavata/airavata-data-models/0.14-SNAPSHOT/airavata-data-models-0.14-SNAPSHOT.jar
> >>>[INFO] Unable to find resource
> >>>'org.apache.airavata:airavata-data-models:jar:0.14-SNAPSHOT' in 
> >>>repository
> >>>apache.snapshots (http://repository.apache.org/snapshots)
> >>>Downloading:
> >>>http://repository.apache.org/snapshots/org/apache/airavata/airavata-model-utils/0.14-SNAPSHOT/airavata-model-utils-0.14-SNAPSHOT.jar
> >>>[INFO] Unable to find resource
> >>>'org.apache.airavata:airavata-model-utils:jar:0.14-SNAPSHOT' in 
> >>>repository
> >>>apache.snapshots (http://repository.apache.org/snapshots)
> >>>Downloading:
> >>>http://repository.apache.org/snapshots/org/apache/airavata/airavata-common-utils/0.14-SNAPSHOT/airavata-common-utils-0.14-SNAPSHOT.jar
> >>>[INFO] Unable to find resource
> >>>'org.apache.airavata:airavata-common-utils:jar:0.14-SNAPSHOT' in
> >>>repository apache.snapshots (http://repository.apache.org/snapshots)
> >>>Downloading:
> >>>http://repository.apache.org/snapshots/org/apache/airavata/airavata-client-api/0.14-SNAPSHOT/airavata-client-api-0.14-SNAPSHOT.jar
> >>>[INFO] Unable to find resource
> >>>'org.apache.airavata:airavata-client-api:jar:0.14-SNAPSHOT' in repository
> >>>apache.snapshots (http://repository.apache.org/snapshots)
> >>>Downloading:
> >>>http://repository.apache.org/snapshots/org/apache/airavata/airavata-gfac-schema-utils/0.14-SNAPSHOT/airavata-gfac-schema-utils-0.14-SNAPSHOT.jar
> >>>[INFO] Unable to find resource
> >>>'org.apache.airavata:airavata-gfac-schema-utils:jar:0.14-SNAPSHOT' in
> >>>repository apache.snapshots (http://repository.apache.org/snapshots)
> >>>Downloading:
> >>>http://repository.apache.org/snapshots/org/apache/airavata/airavata-jpa-registry/0.14-SNAPSHOT/airavata-jpa-registry-0.14-SNAPSHOT.jar
> >>>[INFO] Unable to find resource
> >>>'org.apache.airavata:airavata-jpa-registry:jar:0.14-SNAPSHOT' in
> >>>repository apache.snapshots (http://repository.apache.org/snapshots)
> >>>Downloading:
> >>>http://repository.apache.org/snapshots/org/apache/airavata/airavata-api-stubs/0.14-SNAPSHOT/airavata-api-stubs-0.14-SNAPSHOT.jar
> >>>[INFO] Unable to find resource
> >>>'org.apache.airavata:airavata-api-stubs:jar:0.14-SNAPSHOT' in repository
> >>>apache.snapshots (http://repository.apache.org/snapshots)
> >>>Downloading:
> >>>http://repository.apache.org/snapshots/org/apache/airavata/airavata-client-configuration/0.14-SNAPSHOT/airavata-client-configuration-0.14-SNAPSHOT.jar
> >>>[INFO] Unable to find resource
> >>>'org.apache.airavata:airavata-client-configuration:jar:0.14-SNAPSHOT' in
> >>>repository apache.snapshots (http://repository.apache.org/snapshots)
> >>>[INFO]
> >>>------------------------------------------------------------------------
> >>>[ERROR] BUILD ERROR
> >>>[INFO]
> >>>------------------------------------------------------------------------
> >>>[INFO] Failed to resolve dependencies for one or more projects in the
> >>>reactor. Reason: Missing:
> >>>----------
> >>>1) org.apache.airavata:airavata-data-models:jar:0.14-SNAPSHOT
> >>>
> >>>On Thu, Jul 24, 2014 at 04:19:36PM -0400, Lahiru Gunathilake wrote:
> >>>>This is very true, I can create bunch of features/todos in airavata 
> >>>>based
> >>>>on this email thread.
> >>>>
> >>>>And I will do that and follow up :-)
> >>>>
> >>>>
> >>>>On Thu, Jul 24, 2014 at 4:15 PM, Miller, Mark <mmiller@sdsc.edu> wrote:
> >>>>
> >>>>>I wanted to chime in and say,  that's really the point of Kenneth's
> >>>>>activity.
> >>>>>We do not expect you all to be able to provide everything that a new
> >>>>>developer will need to know. I find it super-efficient to make a 
> >>>>>credible
> >>>>>first pass, and assume there will be holes. He is a test case to drive
> >>>>>requirements and help create documentation for all who follow....
> >>>>>
> >>>>>Mark
> >>>>>
> >>>>>-----Original Message-----
> >>>>>From: Marlon Pierce [mailto:marpierc@iu.edu]
> >>>>>Sent: Thursday, July 24, 2014 12:50 PM
> >>>>>To: Yoshimoto, Kenneth; dev@airavata.apache.org
> >>>>>Cc: dev@scigap.org
> >>>>>Subject: Re: [SciGaP-Dev] CIPRES-Airavata integration proposal]]
> >>>>>
> >>>>>It's in airavata-api/thrift-interface-descriptions/ in your checkout, 
> >>>>>and
> >>>>>in
> >>>>>https://github.com/apache/airavata/tree/master/airavata-api/thrift-interface-descriptions
> >>>>>on github.
> >>>>>
> >>>>>"You should dig around in the API to solve your problems" is not my
> >>>>>preferred response.  We just don't have all the examples we need. Your
> >>>>>feedback and contributions of use cases and scripts will help us pull
> >>>>>these
> >>>>>together.
> >>>>>
> >>>>>Marlon
> >>>>>
> >>>>>On 7/24/14, 3:44 PM, K Yoshimoto wrote:
> >>>>>>Thanks, Marlon.  Where do I find experimentModel.thrift?
> >>>>>>
> >>>>>>On Thu, Jul 24, 2014 at 03:36:49PM -0400, Marlon Pierce wrote:
> >>>>>>>Note in general that the PHP scripts are just illustrative and don't
> >>>>>>>show everything.  However, you do have access to everything in the
> >>>>>>>API in these scripts if you modify them.
> >>>>>>>
> >>>>>>>Maybe the best way to see what can be done is to look at the Thrift
> >>>>>>>models. In this case, the experimentModel.thrift has the complete
> >>>>>>>description.  These are all programmatically available in PHP.
> >>>>>>>
> >>>>>>>
> >>>>>>>Marlon
> >>>>>>>
> >>>>>>>
> >>>>>>>On 7/24/14, 3:31 PM, Singh, Raminder jeet wrote:
> >>>>>>>>Kenneth,
> >>>>>>>>
> >>>>>>>>It looks like your application id is NULL.  Can you please look into
> >>>>>>>>your sample experiment create/launch code? Ideally experiment
> >>>>>>>>validator should though such exception to the user if application id
> >>>>>>>>is not set. I will look into the validation code. I am working to
> >>>>>>>>get experiment errors using a function call.
> >>>>>>>>
> >>>>>>>>>php getExperiment.php pwdtest_e08d60fb-62e9-4d54-bfe4-8688d894585d
> >>>>>>>>object(Airavata\Model\Workspace\Experiment\Experiment)#6 (18) {
> >>>>>>>>    ["experimentID"]=>
> >>>>>>>>    string(44) "pwdtest_e08d60fb-62e9-4d54-bfe4-8688d894585d"
> >>>>>>>>    ["projectID"]=>
> >>>>>>>>    string(48) "kennethtest_deebd5c1-2b77-481b-a01c-9c8213cdc560"
> >>>>>>>>    ["creationTime"]=>
> >>>>>>>>    int(1406155998504)
> >>>>>>>>    ["userName"]=>
> >>>>>>>>    string(7) "kenneth"
> >>>>>>>>    ["name"]=>
> >>>>>>>>    string(7) "pwdtest"
> >>>>>>>>    ["description"]=>
> >>>>>>>>    NULL
> >>>>>>>>    ["applicationId"]=>
> >>>>>>>>    NULL
> >>>>>>>>    ["applicationVersion"]=>
> >>>>>>>>    NULL
> >>>>>>>>
> >>>>>>>>Thanks
> >>>>>>>>Raminder
> >>>>>>>>
> >>>>>>>>
> >>>>>>>>On Jul 24, 2014, at 2:36 PM, K Yoshimoto <kenneth@sdsc.edu> wrote:
> >>>>>>>>
> >>>>>>>>>I took a look through:
> >>>>>>>>>RegisterSampleApplications.java
> >>>>>>>>>RegisterSampleApplicationsUtils.java
> >>>>>>>>>
> >>>>>>>>>I see the examples for setting up the various apps and compute 
> >>>>>>>>>hosts.
> >>>>>>>>>
> >>>>>>>>>some questions:
> >>>>>>>>>- is there an equivalent php sample set for doing this?
> >>>>>>>>>- what's the easiest way to build the java samples, if those have
> >>>>>>>>>   more example coverage than the php samples?
> >>>>>>>>>- is there a document for supported strings for
> >>>>>resourceJobManagerType?
> >>>>>>>>>On Wed, Jul 23, 2014 at 10:45:12PM -0400, Lahiru Gunathilake wrote:
> >>>>>>>>>>Did you have a look in to RegisterSampleApplications.java class ?
> >>>>>>>>>>
> >>>>>>>>>>registerXSEDEHosts method is registering bigred2.uits.iu.edu and
> >>>>>>>>>>its an ssh host, but in your case your job manager type will be
> >>>>>>>>>>FORK.
> >>>>>>>>>>
> >>>>>>>>>>If you can connect to this head node using ssh protocol airavata
> >>>>>>>>>>should work if its gsissh then we do not support it at this point.
> >>>>>>>>>>Configure your ssh key configurations in
> >>>>>>>>>>airavata-server.properties (either username password or keys) or
> >>>>>>>>>>You can store these information to the credential store and parse
> >>>>>>>>>>the tokenId generated during credential storing and use that token
> >>>>>>>>>>along the request.
> >>>>>>>>>>
> >>>>>>>>>>################# ---------- For ssh key pair authentication
> >>>>>>>>>>------------------- ################ #public.ssh.key=/path to
> >>>>>>>>>>public key for ssh #ssh.username=username for ssh connection
> >>>>>>>>>>#private.ssh.key=/path to private key file for ssh
> >>>>>>>>>>#ssh.keypass=passphrase for the private key
> >>>>>>>>>>
> >>>>>>>>>>
> >>>>>>>>>>################# ---------- For ssh key pair authentication
> >>>>>>>>>>------------------- ################ #ssh.username=username for
> >>>>>>>>>>ssh connection #ssh.password=Password for ssh connection
> >>>>>>>>>>
> >>>>>>>>>>I will try to do the same thing in stampede and get back to you.
> >>>>>>>>>>
> >>>>>>>>>>Regards
> >>>>>>>>>>Lahiru
> >>>>>>>>>>
> >>>>>>>>>>
> >>>>>>>>>>
> >>>>>>>>>>
> >>>>>>>>>>On Jul 23, 2014, at 7:05 PM, K Yoshimoto wrote:
> >>>>>>>>>>
> >>>>>>>>>>>Great info!  How do I register a host as a non-hpc resource?
> >>>>>>>>>>>I didn't see an obvious variable name in the
> >>>>>>>>>>>registerComputeResource.php example script.
> >>>>>>>>>>>
> >>>>>>>>>>>On Wed, Jul 23, 2014 at 01:56:51PM -0400, Lahiru Gunathilake 
> >>>>>>>>>>>wrote:
> >>>>>>>>>>>>On Jul 23, 2014, at 1:49 PM, K Yoshimoto wrote:
> >>>>>>>>>>>>
> >>>>>>>>>>>>>Hi, just following up on this query.  Could someone send a
> >>>>>>>>>>>>>step-by-step on registering a new app and using it in an
> >>>>>>>>>>>>>experiment?
> >>>>>>>>>>>>Look at this class RegisterSampleApplications, Suresh is working
> >>>>>>>>>>>>on the experiment creation code and soon it will be committed.
> >>>>>>>>>>>>>Is there
> >>>>>>>>>>>>>a way to specify that an app runs on the login node rather than
> >>>>>>>>>>>>>in batch?
> >>>>>>>>>>>>If you register the same host as a non-hpc resource then it will
> >>>>>>>>>>>>be like a norma exec otherwise we create a PBS script and submit
> >>>>>>>>>>>>the job to the job-manager.
> >>>>>>>>>>>>>Also, could someone point me to the Take 1 integration code
> >>>>>>>>>>>>>that Saminda developed?
> >>>>>>>>>>>>No idea about this.
> >>>>>>>>>>>>>Kenneth
> >>>>>>>>>>>>>
> >>>>>>>>>>>>>On Fri, Jul 18, 2014 at 01:28:00PM -0700, K Yoshimoto wrote:
> >>>>>>>>>>>>>>I can registerApplicationModule.php now.
> >>>>>>>>>>>>>>registerApplicationInterface.php fails, even when I comment
> >>>>>>>>>>>>>>out the disable().  What is the proper way to put in a new
> >>>>>>>>>>>>>>Application?  Is there a way to specify an application that
> >>>>>>>>>>>>>>runs directly on the submit node, rather than through a batch
> >>>>>>>>>>>>>>job?
> >>>>>>>>>>>>>>
> >>>>>>>>>>>>>>On Fri, Jul 18, 2014 at 12:24:08PM -0400, Lahiru Gunathilake
> >>>>>wrote:
> >>>>>>>>>>>>>>>My plan is to use jobname to filter monitoring with an OR
> >>>>>condition.
> >>>>>>>>>>>>>>>Meantime I can experiment the two phase way of job submission
> >>>>>>>>>>>>>>>where I can set the job Id.
> >>>>>>>>>>>>>>>
> >>>>>>>>>>>>>>>
> >>>>>>>>>>>>>>>
> >>>>>>>>>>>>>>>
> >>>>>>>>>>>>>>>On Fri, Jul 18, 2014 at 12:12 PM, Lahiru Gunathilake
> >>>>>>>>>>>>>>><glahiru@gmail.com>
> >>>>>>>>>>>>>>>wrote:
> >>>>>>>>>>>>>>>
> >>>>>>>>>>>>>>>>Verifying valid submit host (login4)...OK
> >>>>>>>>>>>>>>>>>>>--> Verifying valid jobname...OK Enforcing max jobs per
> >>>>>>>>>>>>>>>>>>>--> user...OK Verifying availability of your home dir
> >>>>>>>>>>>>>>>>>>>(/home1/01437/ogce)...OK
> >>>>>>>>>>>>>>>>>>>--> Verifying availability of your work dir
> >>>>>>>>>>>>>>>>>>>(/work/01437/ogce)...OK
> >>>>>>>>>>>>>>>>>>>--> Verifying availability of your scratch dir
> >>>>>>>>>>>>>>>>>>>(/scratch/01437/ogce)...OK
> >>>>>>>>>>>>>>>>>>>--> Verifying valid ssh keys...OK Verifying access to
> >>>>>>>>>>>>>>>>>>>--> desired queue (normal)...OK Verifying job request is
> >>>>>>>>>>>>>>>>>>>--> within current queue limits...OK Checking available
> >>>>>>>>>>>>>>>>>>>--> allocation (TG-STA110014S)...
> >>>>>>>>>>>>>>>>Reason for the in interesting state is above output doesn't
> >>>>>>>>>>>>>>>>have the job Id returned. This is a known issue. We will
> >>>>>>>>>>>>>>>>provide a fix to this issue very soon.
> >>>>>>>>>>>>>>>>
> >>>>>>>>>>>>>>>>
> >>>>>>>>>>>>>>>>
> >>>>>>>>>>>>>>>>On Fri, Jul 18, 2014 at 12:07 PM, K Yoshimoto
> >>>>>>>>>>>>>>>><kenneth@sdsc.edu>
> >>>>>>>>>>>>>>>>wrote:
> >>>>>>>>>>>>>>>>
> >>>>>>>>>>>>>>>>>Sending to dev@airavata.org also.
> >>>>>>>>>>>>>>>>>
> >>>>>>>>>>>>>>>>>>On 7/16/14, 4:22 PM, K Yoshimoto wrote:
> >>>>>>>>>>>>>>>>>>>I got the hello, world experiment to run! I also modified
> >>>>>>>>>>>>>>>>>>>createExperiment.php to play with different inputs.  That
> >>>>>>>>>>>>>>>>>>>worked fine.
> >>>>>>>>>>>>>>>>>>>
> >>>>>>>>>>>>>>>>>>>I was trying to create a new application with
> >>>>>>>>>>>>>>>>>>>registerApplicationModule.php but got an error:
> >>>>>>>>>>>>>>>>>>>
> >>>>>>>>>>>>>>>>>>>php registerApplicationModule.php pwd 1.0 'print working
> >>>>>>>>>>>>>>>>>>>directory'
> >>>>>>>>>>>>>>>>>>>Airavata System Exception: Error while adding application
> >>>>>>>>>>>>>>>>>>>module.
> >>>>>>>>>>>>>>>>>>>More info :
> >>>>>>>>>>>>>>>>>>>org.airavata.appcatalog.cpi.AppCatalogException:
> >>>>>>>>>>>>>>>>>>><openjpa-2.2.0-r422266:1244990 fatal general error>
> >>>>>>>>>>>>>>>>>>>org.apache.openjpa.persistence.PersistenceException: The
> >>>>>>>>>>>>>>>>>>>last packet successfully received from the server was
> >>>>>>>>>>>>>>>>>>>197,463,645 milliseconds ago.  The last packet sent
> >>>>>>>>>>>>>>>>>>>successfully to the server was
> >>>>>>>>>>>>>>>>>>>197,463,646
> >>>>>>>>>>>>>>>>>>>milliseconds ago. is longer than the server configured
> >>>>>>>>>>>>>>>>>>>value of 'wait_timeout'. You should consider either
> >>>>>>>>>>>>>>>>>>>expiring and/or testing connection validity before use in
> >>>>>>>>>>>>>>>>>>>your application, increasing the server configured values
> >>>>>>>>>>>>>>>>>>>for client timeouts, or using the Connector/J connection
> >>>>>>>>>>>>>>>>>>>property 'autoReconnect=true' to avoid this problem.
> >>>>>>>>>>>>>>>>>>>FailedObject: pwd_64d83246-dd86-40ab-9890-5c0492766dcc
> >>>>>>>>>>>>>>>>>>>[org.apache.openjpa.util.StringId] [java.lang.String]
> >>>>>>>>>>>>>>>>>>>
> >>>>>>>>>>>>>>>>>>>On Thu, Jul 10, 2014 at 02:55:21PM -0700, K Yoshimoto
> >>>>>>>>>>>>>>>>>>>wrote:
> >>>>>>>>>>>>>>>>>>>>Okay, now I'm getting a really interesting job status:
> >>>>>>>>>>>>>>>>>>>>"UNKNOWN".
> >>>>>>>>>>>>>>>>>>>>
> >>>>>>>>>>>>>>>>>>>>
> >>>>>>>>>>>>>>>>>>>>john@anya
> >>>>>>>>>>>>>>>>>:/media/mdhpss/scigap/phpclientsamples/airavata/airavata-ap
> >>>>>>>>>>>>>>>>>i/airavata-client-sdks/airavata-php-sdk/src/main/resources/
> >>>>>>>>>>>>>>>>>php-cli-samples$
> >>>>>>>>>>>>>>>>>>>>php getExperimentStatus.php
> >>>>>>>>>>>>>>>>>>>>kennethexp4_5855ec6f-651b-4e01-83d0-67fb5b852eb1
> >>>>>>>>>>>>>>>>>>>>experiment status = LAUNCHED <br> john@anya
> >>>>>>>>>>>>>>>>>:/media/mdhpss/scigap/phpclientsamples/airavata/airavata-ap
> >>>>>>>>>>>>>>>>>i/airavata-client-sdks/airavata-php-sdk/src/main/resources/
> >>>>>>>>>>>>>>>>>php-cli-samples$
> >>>>>>>>>>>>>>>>>>>>php getExperimentStatus.php
> >>>>>>>>>>>>>>>>>>>>kennethexp4_5855ec6f-651b-4e01-83d0-67fb5b852eb1
> >>>>>>>>>>>>>>>>>>>>experiment status = LAUNCHED <br> john@anya
> >>>>>>>>>>>>>>>>>:/media/mdhpss/scigap/phpclientsamples/airavata/airavata-ap
> >>>>>>>>>>>>>>>>>i/airavata-client-sdks/airavata-php-sdk/src/main/resources/
> >>>>>>>>>>>>>>>>>php-cli-samples$
> >>>>>>>>>>>>>>>>>>>>php getExperimentStatus.php
> >>>>>>>>>>>>>>>>>>>>kennethexp4_5855ec6f-651b-4e01-83d0-67fb5b852eb1
> >>>>>>>>>>>>>>>>>>>>experiment status = UNKNOWN <br> john@anya
> >>>>>>>>>>>>>>>>>:/media/mdhpss/scigap/phpclientsamples/airavata/airavata-ap
> >>>>>>>>>>>>>>>>>i/airavata-client-sdks/airavata-php-sdk/src/main/resources/
> >>>>>>>>>>>>>>>>>php-cli-samples$
> >>>>>>>>>>>>>>>>>>>>php getExperimentStatus.php
> >>>>>>>>>>>>>>>>>>>>kennethexp4_5855ec6f-651b-4e01-83d0-67fb5b852eb1
> >>>>>>>>>>>>>>>>>>>>experiment status = UNKNOWN <br> john@anya
> >>>>>>>>>>>>>>>>>:/media/mdhpss/scigap/phpclientsamples/airavata/airavata-ap
> >>>>>>>>>>>>>>>>>i/airavata-client-sdks/airavata-php-sdk/src/main/resources/
> >>>>>>>>>>>>>>>>>php-cli-samples$
> >>>>>>>>>>>>>>>>>>>>On Thu, Jul 10, 2014 at 05:37:12PM -0400, Raminderjeet
> >>>>>>>>>>>>>>>>>>>>Singh
> >>>>>>>>>>>>>>>>>>>>wrote:
> >>>>>>>>>>>>>>>>>>>>>I reported it already to TACC and working with them to
> >>>>>>>>>>>>>>>>>>>>>get it resolved.
> >>>>>>>>>>>>>>>>>>>>>This is an occasional issue. If you submit new job it
> >>>>>>>>>>>>>>>>>>>>>will work.
> >>>>>>>>>>>>>>>>>>>>>
> >>>>>>>>>>>>>>>>>>>>>Thanks
> >>>>>>>>>>>>>>>>>>>>>Raminder
> >>>>>>>>>>>>>>>>>>>>>
> >>>>>>>>>>>>>>>>>>>>>
> >>>>>>>>>>>>>>>>>>>>>
> >>>>>>>>>>>>>>>>>>>>>
> >>>>>>>>>>>>>>>>>>>>>On Thu, Jul 10, 2014 at 5:15 PM, K Yoshimoto
> >>>>>>>>>>>>>>>>>>>>><kenneth@sdsc.edu>
> >>>>>>>>>>>>>>>>>wrote:
> >>>>>>>>>>>>>>>>>>>>>>I'm getting FAILED with stampede. Maybe allocation
> >>>>>>>>>>>>>>>>>>>>>>check fails?
> >>>>>>>>>>>>>>>>>>>>>>
> >>>>>>>>>>>>>>>>>>>>>>php getExperiment.php
> >>>>>>>>>>>>>>>>>>>>>>kennethexp4_9acfe7f5-70ad-423e-9eee-602c09bc8ae4
> >>>>>>>>>>>>>>>>>>>>>>
> >>>>>>>>>>>>>>>>>>>>>>...
> >>>>>>>>>>>>>>>>>>>>>>   [12]=>
> >>>>>>>>>>>>>>>>>>>>>>object(Airavata\Model\Workspace\Experiment\ErrorDetail
> >>>>>>>>>>>>>>>>>>>>>>s)#74
> >>>>>>>>>>>>>>>>>>>>>>(9) {
> >>>>>>>>>>>>>>>>>>>>>>     ["errorID"]=>
> >>>>>>>>>>>>>>>>>>>>>>     string(4) "1077"
> >>>>>>>>>>>>>>>>>>>>>>     ["creationTime"]=>
> >>>>>>>>>>>>>>>>>>>>>>     int(1405026660866)
> >>>>>>>>>>>>>>>>>>>>>>     ["actualErrorMessage"]=>
> >>>>>>>>>>>>>>>>>>>>>>     string(792) "Error submitting the job to host
> >>>>>>>>>>>>>>>>>>>>>>stampede.tacc.xsede.org message:
> >>>>>>>>>>>>>>>>>>>>>>
> >>>>>-----------------------------------------------------------------
> >>>>>>>>>>>>>>>>>>>>>>             Welcome to the Stampede Supercomputer
> >>>>>>>>>>>>>>>>>>>>>>------------------------------------------------------
> >>>>>>>>>>>>>>>>>>>>>>-----------
> >>>>>>>>>>>>>>>>>>>>>>
> >>>>>>>>>>>>>>>>>>>>>>--> Verifying valid submit host (login4)...OK
> >>>>>>>>>>>>>>>>>>>>>>--> Verifying valid jobname...OK Enforcing max jobs
> >>>>>>>>>>>>>>>>>>>>>>--> per user...OK Verifying availability of your home
> >>>>>>>>>>>>>>>>>>>>>>--> dir
> >>>>>>>>>>>>>>>>>>>>>>(/home1/01437/ogce)...OK
> >>>>>>>>>>>>>>>>>>>>>>--> Verifying availability of your work dir
> >>>>>>>>>>>>>>>>>>>>>>(/work/01437/ogce)...OK
> >>>>>>>>>>>>>>>>>>>>>>--> Verifying availability of your scratch dir
> >>>>>>>>>>>>>>>>>>>>>>(/scratch/01437/ogce)...OK
> >>>>>>>>>>>>>>>>>>>>>>--> Verifying valid ssh keys...OK Verifying access to
> >>>>>>>>>>>>>>>>>>>>>>--> desired queue (normal)...OK Verifying job request
> >>>>>>>>>>>>>>>>>>>>>>--> is within current queue limits...OK Checking
> >>>>>>>>>>>>>>>>>>>>>>--> available allocation (TG-STA110014S)..."
> >>>>>>>>>>>>>>>>>>>>>>     ["userFriendlyMessage"]=>
> >>>>>>>>>>>>>>>>>>>>>>     NULL
> >>>>>>>>>>>>>>>>>>>>>>     ["errorCategory"]=>
> >>>>>>>>>>>>>>>>>>>>>>     int(6)
> >>>>>>>>>>>>>>>>>>>>>>     ["transientOrPersistent"]=>
> >>>>>>>>>>>>>>>>>>>>>>     bool(false)
> >>>>>>>>>>>>>>>>>>>>>>     ["correctiveAction"]=>
> >>>>>>>>>>>>>>>>>>>>>>     int(1)
> >>>>>>>>>>>>>>>>>>>>>>     ["actionableGroup"]=>
> >>>>>>>>>>>>>>>>>>>>>>     int(2)
> >>>>>>>>>>>>>>>>>>>>>>     ["rootCauseErrorIdList"]=>
> >>>>>>>>>>>>>>>>>>>>>>     NULL
> >>>>>>>>>>>>>>>>>>>>>>   }
> >>>>>>>>>>>>>>>>>>>>>>   [13]=>
> >>>>>>>>>>>>>>>>>>>>>>object(Airavata\Model\Workspace\Experiment\ErrorDetail
> >>>>>>>>>>>>>>>>>>>>>>s)#75
> >>>>>>>>>>>>>>>>>>>>>>(9) {
> >>>>>>>>>>>>>>>>>>>>>>     ["errorID"]=>
> >>>>>>>>>>>>>>>>>>>>>>     string(4) "1078"
> >>>>>>>>>>>>>>>>>>>>>>     ["creationTime"]=>
> >>>>>>>>>>>>>>>>>>>>>>     int(1405026660866)
> >>>>>>>>>>>>>>>>>>>>>>     ["actualErrorMessage"]=>
> >>>>>>>>>>>>>>>>>>>>>>     string(792) "Error submitting the job to host
> >>>>>>>>>>>>>>>>>>>>>>stampede.tacc.xsede.org message:
> >>>>>>>>>>>>>>>>>>>>>>
> >>>>>-----------------------------------------------------------------
> >>>>>>>>>>>>>>>>>>>>>>             Welcome to the Stampede Supercomputer
> >>>>>>>>>>>>>>>>>>>>>>------------------------------------------------------
> >>>>>>>>>>>>>>>>>>>>>>-----------
> >>>>>>>>>>>>>>>>>>>>>>
> >>>>>>>>>>>>>>>>>>>>>>--> Verifying valid submit host (login4)...OK
> >>>>>>>>>>>>>>>>>>>>>>--> Verifying valid jobname...OK Enforcing max jobs
> >>>>>>>>>>>>>>>>>>>>>>--> per user...OK Verifying availability of your home
> >>>>>>>>>>>>>>>>>>>>>>--> dir
> >>>>>>>>>>>>>>>>>>>>>>(/home1/01437/ogce)...OK
> >>>>>>>>>>>>>>>>>>>>>>--> Verifying availability of your work dir
> >>>>>>>>>>>>>>>>>>>>>>(/work/01437/ogce)...OK
> >>>>>>>>>>>>>>>>>>>>>>--> Verifying availability of your scratch dir
> >>>>>>>>>>>>>>>>>>>>>>(/scratch/01437/ogce)...OK
> >>>>>>>>>>>>>>>>>>>>>>--> Verifying valid ssh keys...OK Verifying access to
> >>>>>>>>>>>>>>>>>>>>>>--> desired queue (normal)...OK Verifying job request
> >>>>>>>>>>>>>>>>>>>>>>--> is within current queue limits...OK Checking
> >>>>>>>>>>>>>>>>>>>>>>--> available allocation (TG-STA110014S)..."
> >>>>>>>>>>>>>>>>>>>>>>     ["userFriendlyMessage"]=>
> >>>>>>>>>>>>>>>>>>>>>>     NULL
> >>>>>>>>>>>>>>>>>>>>>>     ["errorCategory"]=>
> >>>>>>>>>>>>>>>>>>>>>>     int(6)
> >>>>>>>>>>>>>>>>>>>>>>     ["transientOrPersistent"]=>
> >>>>>>>>>>>>>>>>>>>>>>     bool(false)
> >>>>>>>>>>>>>>>>>>>>>>     ["correctiveAction"]=>
> >>>>>>>>>>>>>>>>>>>>>>     int(1)
> >>>>>>>>>>>>>>>>>>>>>>     ["actionableGroup"]=>
> >>>>>>>>>>>>>>>>>>>>>>     int(2)
> >>>>>>>>>>>>>>>>>>>>>>     ["rootCauseErrorIdList"]=>
> >>>>>>>>>>>>>>>>>>>>>>     NULL
> >>>>>>>>>>>>>>>>>>>>>>   }
> >>>>>>>>>>>>>>>>>>>>>>   [14]=>
> >>>>>>>>>>>>>>>>>>>>>>object(Airavata\Model\Workspace\Experiment\ErrorDetail
> >>>>>>>>>>>>>>>>>>>>>>s)#76
> >>>>>>>>>>>>>>>>>>>>>>(9) {
> >>>>>>>>>>>>>>>>>>>>>>     ["errorID"]=>
> >>>>>>>>>>>>>>>>>>>>>>     string(4) "1079"
> >>>>>>>>>>>>>>>>>>>>>>     ["creationTime"]=>
> >>>>>>>>>>>>>>>>>>>>>>     int(1405026660866)
> >>>>>>>>>>>>>>>>>>>>>>     ["actualErrorMessage"]=>
> >>>>>>>>>>>>>>>>>>>>>>     string(792) "Error submitting the job to host
> >>>>>>>>>>>>>>>>>>>>>>stampede.tacc.xsede.org message:
> >>>>>>>>>>>>>>>>>>>>>>
> >>>>>-----------------------------------------------------------------
> >>>>>>>>>>>>>>>>>>>>>>             Welcome to the Stampede Supercomputer
> >>>>>>>>>>>>>>>>>>>>>>------------------------------------------------------
> >>>>>>>>>>>>>>>>>>>>>>-----------
> >>>>>>>>>>>>>>>>>>>>>>
> >>>>>>>>>>>>>>>>>>>>>>--> Verifying valid submit host (login4)...OK
> >>>>>>>>>>>>>>>>>>>>>>--> Verifying valid jobname...OK Enforcing max jobs
> >>>>>>>>>>>>>>>>>>>>>>--> per user...OK Verifying availability of your home
> >>>>>>>>>>>>>>>>>>>>>>--> dir
> >>>>>>>>>>>>>>>>>>>>>>(/home1/01437/ogce)...OK
> >>>>>>>>>>>>>>>>>>>>>>--> Verifying availability of your work dir
> >>>>>>>>>>>>>>>>>>>>>>(/work/01437/ogce)...OK
> >>>>>>>>>>>>>>>>>>>>>>--> Verifying availability of your scratch dir
> >>>>>>>>>>>>>>>>>>>>>>(/scratch/01437/ogce)...OK
> >>>>>>>>>>>>>>>>>>>>>>--> Verifying valid ssh keys...OK Verifying access to
> >>>>>>>>>>>>>>>>>>>>>>--> desired queue (normal)...OK Verifying job request
> >>>>>>>>>>>>>>>>>>>>>>--> is within current queue limits...OK Checking
> >>>>>>>>>>>>>>>>>>>>>>--> available allocation (TG-STA110014S)..."
> >>>>>>>>>>>>>>>>>>>>>>     ["userFriendlyMessage"]=>
> >>>>>>>>>>>>>>>>>>>>>>     NULL
> >>>>>>>>>>>>>>>>>>>>>>     ["errorCategory"]=>
> >>>>>>>>>>>>>>>>>>>>>>     int(6)
> >>>>>>>>>>>>>>>>>>>>>>     ["transientOrPersistent"]=>
> >>>>>>>>>>>>>>>>>>>>>>     bool(false)
> >>>>>>>>>>>>>>>>>>>>>>     ["correctiveAction"]=>
> >>>>>>>>>>>>>>>>>>>>>>     int(1)
> >>>>>>>>>>>>>>>>>>>>>>     ["actionableGroup"]=>
> >>>>>>>>>>>>>>>>>>>>>>     int(2)
> >>>>>>>>>>>>>>>>>>>>>>     ["rootCauseErrorIdList"]=>
> >>>>>>>>>>>>>>>>>>>>>>     NULL
> >>>>>>>>>>>>>>>>>>>>>>   }
> >>>>>>>>>>>>>>>>>>>>>>   [15]=>
> >>>>>>>>>>>>>>>>>>>>>>object(Airavata\Model\Workspace\Experiment\ErrorDetail
> >>>>>>>>>>>>>>>>>>>>>>s)#77
> >>>>>>>>>>>>>>>>>>>>>>(9) {
> >>>>>>>>>>>>>>>>>>>>>>     ["errorID"]=>
> >>>>>>>>>>>>>>>>>>>>>>     string(4) "1080"
> >>>>>>>>>>>>>>>>>>>>>>     ["creationTime"]=>
> >>>>>>>>>>>>>>>>>>>>>>     int(1405026660866)
> >>>>>>>>>>>>>>>>>>>>>>     ["actualErrorMessage"]=>
> >>>>>>>>>>>>>>>>>>>>>>     string(792) "Error submitting the job to host
> >>>>>>>>>>>>>>>>>>>>>>stampede.tacc.xsede.org message:
> >>>>>>>>>>>>>>>>>>>>>>
> >>>>>-----------------------------------------------------------------
> >>>>>>>>>>>>>>>>>>>>>>             Welcome to the Stampede Supercomputer
> >>>>>>>>>>>>>>>>>>>>>>------------------------------------------------------
> >>>>>>>>>>>>>>>>>>>>>>-----------
> >>>>>>>>>>>>>>>>>>>>>>
> >>>>>>>>>>>>>>>>>>>>>>--> Verifying valid submit host (login4)...OK
> >>>>>>>>>>>>>>>>>>>>>>--> Verifying valid jobname...OK Enforcing max jobs
> >>>>>>>>>>>>>>>>>>>>>>--> per user...OK Verifying availability of your home
> >>>>>>>>>>>>>>>>>>>>>>--> dir
> >>>>>>>>>>>>>>>>>>>>>>(/home1/01437/ogce)...OK
> >>>>>>>>>>>>>>>>>>>>>>--> Verifying availability of your work dir
> >>>>>>>>>>>>>>>>>>>>>>(/work/01437/ogce)...OK
> >>>>>>>>>>>>>>>>>>>>>>--> Verifying availability of your scratch dir
> >>>>>>>>>>>>>>>>>>>>>>(/scratch/01437/ogce)...OK
> >>>>>>>>>>>>>>>>>>>>>>--> Verifying valid ssh keys...OK Verifying access to
> >>>>>>>>>>>>>>>>>>>>>>--> desired queue (normal)...OK Verifying job request
> >>>>>>>>>>>>>>>>>>>>>>--> is within current queue limits...OK Checking
> >>>>>>>>>>>>>>>>>>>>>>--> available allocation (TG-STA110014S)..."
> >>>>>>>>>>>>>>>>>>>>>>     ["userFriendlyMessage"]=>
> >>>>>>>>>>>>>>>>>>>>>>     NULL
> >>>>>>>>>>>>>>>>>>>>>>     ["errorCategory"]=>
> >>>>>>>>>>>>>>>>>>>>>>     int(6)
> >>>>>>>>>>>>>>>>>>>>>>     ["transientOrPersistent"]=>
> >>>>>>>>>>>>>>>>>>>>>>     bool(false)
> >>>>>>>>>>>>>>>>>>>>>>     ["correctiveAction"]=>
> >>>>>>>>>>>>>>>>>>>>>>     int(1)
> >>>>>>>>>>>>>>>>>>>>>>     ["actionableGroup"]=>
> >>>>>>>>>>>>>>>>>>>>>>     int(2)
> >>>>>>>>>>>>>>>>>>>>>>     ["rootCauseErrorIdList"]=>
> >>>>>>>>>>>>>>>>>>>>>>     NULL
> >>>>>>>>>>>>>>>>>>>>>>   }
> >>>>>>>>>>>>>>>>>>>>>>}
> >>>>>>>>>>>>>>>>>>>>>>}
> >>>>>>>>>>>>>>>>>>>>>>
> >>>>>>>>>>>>>>>>>>>>>>On Thu, Jul 10, 2014 at 08:53:06PM +0000, Singh,
> >>>>>>>>>>>>>>>>>>>>>>Raminder jeet wrote:
> >>>>>>>>>>>>>>>>>>>>>>>We setup a new database on Tuesday. Everything
> >>>>>>>>>>>>>>>>>>>>>>>created after that should
> >>>>>>>>>>>>>>>>>>>>>>exist.
> >>>>>>>>>>>>>>>>>>>>>>>Thanks
> >>>>>>>>>>>>>>>>>>>>>>>Raminder
> >>>>>>>>>>>>>>>>>>>>>>>
> >>>>>>>>>>>>>>>>>>>>>>>On Jul 10, 2014, at 4:47 PM, K Yoshimoto
> >>>>>>>>>>>>>>>>>>>>>>><kenneth@sdsc.edu>
> >>>>>>>>>>>>>>>>>>>>>>>wrote:
> >>>>>>>>>>>>>>>>>>>>>>>
> >>>>>>>>>>>>>>>>>>>>>>>>Thanks, Raminder.  Did the old experiment, project
> >>>>>>>>>>>>>>>>>>>>>>>>and user get wiped out or should they still be
> >>>>>>>>>>>>>>>>>>>>>>>>there?
> >>>>>>>>>>>>>>>>>>>>>>>>
> >>>>>>>>>>>>>>>>>>>>>>>>On Thu, Jul 10, 2014 at 08:38:24PM +0000, Singh,
> >>>>>>>>>>>>>>>>>>>>>>>>Raminder jeet
> >>>>>>>>>>>>>>>>>>>>>>>>wrote:
> >>>>>>>>>>>>>>>>>>>>>>>>>Hi Kenneth,
> >>>>>>>>>>>>>>>>>>>>>>>>>
> >>>>>>>>>>>>>>>>>>>>>>>>>Create and launch should work now. I added default
> >>>>>>>>>>>>>>>>>>>>>>>>>values for
> >>>>>>>>>>>>>>>>>>>>>>applicationid and hostid in createExperiment for Echo
> >>>>>>>>>>>>>>>>>>>>>>application on Stampede. I updated launchExperiment
> >>>>>>>>>>>>>>>>>>>>>>with a valid airavata token for experiment to work
> >>>>>>>>>>>>>>>>>>>>>>well. Please let me know if you face any other issue.
> >>>>>>>>>>>>>>>>>>>>>>I am also in process of testing other scripts.
> >>>>>>>>>>>>>>>>>>>>>>>>>Thanks
> >>>>>>>>>>>>>>>>>>>>>>>>>Raminder
> >>>>>>>>>>>>>>>>>>>>>>>>>
> >>>>>>>>>>>>>>>>>>>>>>>>>On Jul 10, 2014, at 4:04 PM, Marlon Pierce
> >>>>>>>>>>>>>>>>>>>>>>>>><marpierc@iu.edu>
> >>>>>>>>>>>>>>>>>>>>>>>>>wrote:
> >>>>>>>>>>>>>>>>>>>>>>>>>
> >>>>>>>>>>>>>>>>>>>>>>>>>>There is a bug in script (API changed). Raminder
> >>>>>>>>>>>>>>>>>>>>>>>>>>is working to fix
> >>>>>>>>>>>>>>>>>>>>>>it now.
> >>>>>>>>>>>>>>>>>>>>>>>>>>Marlon
> >>>>>>>>>>>>>>>>>>>>>>>>>>
> >>>>>>>>>>>>>>>>>>>>>>>>>>On 7/10/14, 3:57 PM, K Yoshimoto wrote:
> >>>>>>>>>>>>>>>>>>>>>>>>>>>I launched another one, and it's still in 
> >>>>>>>>>>>>>>>>>>>>>>>>>>>LAUNCHED.
> >>>>>>>>>>>>>>>>>>>>>>>>>>>Is there a way for the gateway developer to
> >>>>>>>>>>>>>>>>>>>>>>>>>>>retrieve a job id?
> >>>>>>>>>>>>>>>>>>>>>>>>>>>
> >>>>>>>>>>>>>>>>>>>>>>>>>>>john@anya
> >>>>>>>>>>>>>>>>>:/media/mdhpss/scigap/phpclientsamples/airavata/airavata-ap
> >>>>>>>>>>>>>>>>>i/airavata-client-sdks/airavata-php-sdk/src/main/resources/
> >>>>>>>>>>>>>>>>>php-cli-samples$
> >>>>>>>>>>>>>>>>>>>>>>php getExperimentStatus.php
> >>>>>>>>>>>>>>>>>>>>>>kennethexp2_f161f3a5-04a8-4ee9-862c-918e383e852d
> >>>>>>>>>>>>>>>>>>>>>>>>>>>experiment status = LAUNCHED <br> john@anya
> >>>>>>>>>>>>>>>>>:/media/mdhpss/scigap/phpclientsamples/airavata/airavata-ap
> >>>>>>>>>>>>>>>>>i/airavata-client-sdks/airavata-php-sdk/src/main/resources/
> >>>>>>>>>>>>>>>>>php-cli-samples$
> >>>>>>>>>>>>>>>>>>>>>>php getExperimentStatus.php
> >>>>>>>>>>>>>>>>>>>>>>kennethexp2_f161f3a5-04a8-4ee9-862c-918e383e852d
> >>>>>>>>>>>>>>>>>>>>>>>>>>>experiment status = LAUNCHED
> >>>>>>>>>>>>>>>>>>>>>>>>>>><br>
> >>>>>>>>>>>>>>>>>>>>>>>>>>>john@anya
> >>>>>:/media/mdhpss/scigap/phpclientsamples/airavata/airavata-api/airavata-client-sdks/airavata-php-sdk/src/main/resources/php-cli-samples$
> >>>>>>>>>>>>>>>>>>>>>>php getExperiment.php
> >>>>>>>>>>>>>>>>>>>>>>kennethexp2_f161f3a5-04a8-4ee9-862c-918e383e852d
> >>>>>object(Airavata\Model\Workspace\Experiment\Experiment)#6 (18) {
> >>>>>>>>>>>>>>>>>>>>>>>>>>>["experimentID"]=>
> >>>>>>>>>>>>>>>>>>>>>>>>>>>string(48)
> >>>>>>>>>>>>>>>>>>>>>>>>>>>"kennethexp2_f161f3a5-04a8-4ee9-862c-918e383e852d"
> >>>>>>>>>>>>>>>>>>>>>>>>>>>["projectID"]=>
> >>>>>>>>>>>>>>>>>>>>>>>>>>>string(48)
> >>>>>>>>>>>>>>>>>>>>>>>>>>>"kennethtest_721c9e67-846d-4081-b1db-a573e198ec01"
> >>>>>>>>>>>>>>>>>>>>>>>>>>>["creationTime"]=>
> >>>>>>>>>>>>>>>>>>>>>>>>>>>int(1405021121026)
> >>>>>>>>>>>>>>>>>>>>>>>>>>>["userName"]=>
> >>>>>>>>>>>>>>>>>>>>>>>>>>>string(7) "kenneth"
> >>>>>>>>>>>>>>>>>>>>>>>>>>>["name"]=>
> >>>>>>>>>>>>>>>>>>>>>>>>>>>string(11) "kennethexp2"
> >>>>>>>>>>>>>>>>>>>>>>>>>>>["description"]=>
> >>>>>>>>>>>>>>>>>>>>>>>>>>>NULL
> >>>>>>>>>>>>>>>>>>>>>>>>>>>["applicationId"]=>
> >>>>>>>>>>>>>>>>>>>>>>>>>>>string(11) "SimpleEcho2"
> >>>>>>>>>>>>>>>>>>>>>>>>>>>["applicationVersion"]=>
> >>>>>>>>>>>>>>>>>>>>>>>>>>>NULL
> >>>>>>>>>>>>>>>>>>>>>>>>>>>["workflowTemplateId"]=>
> >>>>>>>>>>>>>>>>>>>>>>>>>>>NULL
> >>>>>>>>>>>>>>>>>>>>>>>>>>>["workflowTemplateVersion"]=>
> >>>>>>>>>>>>>>>>>>>>>>>>>>>NULL
> >>>>>>>>>>>>>>>>>>>>>>>>>>>["userConfigurationData"]=>
> >>>>>>>>>>>>>>>>>>>>>>>>>>>
> >>>>>object(Airavata\Model\Workspace\Experiment\UserConfigurationData)#7
> >>>>>>>>>>>>>>>>>(7)
> >>>>>>>>>>>>>>>>>>>>>>{
> >>>>>>>>>>>>>>>>>>>>>>>>>>>["airavataAutoSchedule"]=>
> >>>>>>>>>>>>>>>>>>>>>>>>>>>bool(false)
> >>>>>>>>>>>>>>>>>>>>>>>>>>>["overrideManualScheduledParams"]=>
> >>>>>>>>>>>>>>>>>>>>>>>>>>>bool(false)
> >>>>>>>>>>>>>>>>>>>>>>>>>>>["shareExperimentPublicly"]=>
> >>>>>>>>>>>>>>>>>>>>>>>>>>>bool(false)
> >>>>>>>>>>>>>>>>>>>>>>>>>>>["computationalResourceScheduling"]=>
> >>>>>>>>>>>>>>>>>>>>>>>>>>>
> >>>>>object(Airavata\Model\Workspace\Experiment\ComputationalResourceScheduling)#8
> >>>>>>>>>>>>>>>>>>>>>>(9) {
> >>>>>>>>>>>>>>>>>>>>>>>>>>>["resourceHostId"]=>
> >>>>>>>>>>>>>>>>>>>>>>>>>>>    string(17) "trestles.sdsc.edu"
> >>>>>>>>>>>>>>>>>>>>>>>>>>>    ["totalCPUCount"]=>
> >>>>>>>>>>>>>>>>>>>>>>>>>>>    int(1)
> >>>>>>>>>>>>>>>>>>>>>>>>>>>    ["nodeCount"]=>
> >>>>>>>>>>>>>>>>>>>>>>>>>>>    int(1)
> >>>>>>>>>>>>>>>>>>>>>>>>>>>    ["numberOfThreads"]=>
> >>>>>>>>>>>>>>>>>>>>>>>>>>>    int(0)
> >>>>>>>>>>>>>>>>>>>>>>>>>>>    ["queueName"]=>
> >>>>>>>>>>>>>>>>>>>>>>>>>>>    string(6) "normal"
> >>>>>>>>>>>>>>>>>>>>>>>>>>>    ["wallTimeLimit"]=>
> >>>>>>>>>>>>>>>>>>>>>>>>>>>    int(15)
> >>>>>>>>>>>>>>>>>>>>>>>>>>>    ["jobStartTime"]=>
> >>>>>>>>>>>>>>>>>>>>>>>>>>>    int(566815272)
> >>>>>>>>>>>>>>>>>>>>>>>>>>>    ["totalPhysicalMemory"]=>
> >>>>>>>>>>>>>>>>>>>>>>>>>>>    int(0)
> >>>>>>>>>>>>>>>>>>>>>>>>>>>    ["computationalProjectAccount"]=>
> >>>>>>>>>>>>>>>>>>>>>>>>>>>    NULL
> >>>>>>>>>>>>>>>>>>>>>>>>>>>}
> >>>>>>>>>>>>>>>>>>>>>>>>>>>["advanceInputDataHandling"]=>
> >>>>>>>>>>>>>>>>>>>>>>>>>>>NULL
> >>>>>>>>>>>>>>>>>>>>>>>>>>>["advanceOutputDataHandling"]=>
> >>>>>>>>>>>>>>>>>>>>>>>>>>>NULL
> >>>>>>>>>>>>>>>>>>>>>>>>>>>["qosParams"]=>
> >>>>>>>>>>>>>>>>>>>>>>>>>>>NULL
> >>>>>>>>>>>>>>>>>>>>>>>>>>>}
> >>>>>>>>>>>>>>>>>>>>>>>>>>>["workflowExecutionInstanceId"]=>
> >>>>>>>>>>>>>>>>>>>>>>>>>>>NULL
> >>>>>>>>>>>>>>>>>>>>>>>>>>>["experimentInputs"]=>
> >>>>>>>>>>>>>>>>>>>>>>>>>>>array(1) {
> >>>>>>>>>>>>>>>>>>>>>>>>>>>[0]=>
> >>>>>>>>>>>>>>>>>>>>>>>>>>>
> >>>>>object(Airavata\Model\Workspace\Experiment\DataObjectType)#9 (4)
> >>>>>>>>>>>>>>>>>>>>>>{
> >>>>>>>>>>>>>>>>>>>>>>>>>>>    ["key"]=>
> >>>>>>>>>>>>>>>>>>>>>>>>>>>    string(10) "echo_input"
> >>>>>>>>>>>>>>>>>>>>>>>>>>>    ["value"]=>
> >>>>>>>>>>>>>>>>>>>>>>>>>>>    string(23) "echo_output=Hello World"
> >>>>>>>>>>>>>>>>>>>>>>>>>>>    ["type"]=>
> >>>>>>>>>>>>>>>>>>>>>>>>>>>    int(0)
> >>>>>>>>>>>>>>>>>>>>>>>>>>>    ["metaData"]=>
> >>>>>>>>>>>>>>>>>>>>>>>>>>>    NULL
> >>>>>>>>>>>>>>>>>>>>>>>>>>>}
> >>>>>>>>>>>>>>>>>>>>>>>>>>>}
> >>>>>>>>>>>>>>>>>>>>>>>>>>>["experimentOutputs"]=>
> >>>>>>>>>>>>>>>>>>>>>>>>>>>array(1) {
> >>>>>>>>>>>>>>>>>>>>>>>>>>>[0]=>
> >>>>>>>>>>>>>>>>>>>>>>>>>>>
> >>>>>object(Airavata\Model\Workspace\Experiment\DataObjectType)#10
> >>>>>>>>>>>>>>>>>>>>>>(4) {
> >>>>>>>>>>>>>>>>>>>>>>>>>>>    ["key"]=>
> >>>>>>>>>>>>>>>>>>>>>>>>>>>    string(11) "echo_output"
> >>>>>>>>>>>>>>>>>>>>>>>>>>>    ["value"]=>
> >>>>>>>>>>>>>>>>>>>>>>>>>>>    string(0) ""
> >>>>>>>>>>>>>>>>>>>>>>>>>>>    ["type"]=>
> >>>>>>>>>>>>>>>>>>>>>>>>>>>    int(0)
> >>>>>>>>>>>>>>>>>>>>>>>>>>>    ["metaData"]=>
> >>>>>>>>>>>>>>>>>>>>>>>>>>>    NULL
> >>>>>>>>>>>>>>>>>>>>>>>>>>>}
> >>>>>>>>>>>>>>>>>>>>>>>>>>>}
> >>>>>>>>>>>>>>>>>>>>>>>>>>>["experimentStatus"]=>
> >>>>>>>>>>>>>>>>>>>>>>>>>>>
> >>>>>object(Airavata\Model\Workspace\Experiment\ExperimentStatus)#11
> >>>>>>>>>>>>>>>>>>>>>>(2) {
> >>>>>>>>>>>>>>>>>>>>>>>>>>>["experimentState"]=>
> >>>>>>>>>>>>>>>>>>>>>>>>>>>int(3)
> >>>>>>>>>>>>>>>>>>>>>>>>>>>["timeOfStateChange"]=>
> >>>>>>>>>>>>>>>>>>>>>>>>>>>int(1405021142702)
> >>>>>>>>>>>>>>>>>>>>>>>>>>>}
> >>>>>>>>>>>>>>>>>>>>>>>>>>>["stateChangeList"]=>
> >>>>>>>>>>>>>>>>>>>>>>>>>>>array(1) {
> >>>>>>>>>>>>>>>>>>>>>>>>>>>[0]=>
> >>>>>>>>>>>>>>>>>>>>>>>>>>>
> >>>>>object(Airavata\Model\Workspace\Experiment\WorkflowNodeStatus)#12
> >>>>>>>>>>>>>>>>>>>>>>(2) {
> >>>>>>>>>>>>>>>>>>>>>>>>>>>["workflowNodeState"]=>
> >>>>>>>>>>>>>>>>>>>>>>>>>>>    int(7)
> >>>>>>>>>>>>>>>>>>>>>>>>>>>    ["timeOfStateChange"]=>
> >>>>>>>>>>>>>>>>>>>>>>>>>>>    int(1405021142334)
> >>>>>>>>>>>>>>>>>>>>>>>>>>>}
> >>>>>>>>>>>>>>>>>>>>>>>>>>>}
> >>>>>>>>>>>>>>>>>>>>>>>>>>>["workflowNodeDetailsList"]=>
> >>>>>>>>>>>>>>>>>>>>>>>>>>>array(1) {
> >>>>>>>>>>>>>>>>>>>>>>>>>>>[0]=>
> >>>>>>>>>>>>>>>>>>>>>>>>>>>
> >>>>>object(Airavata\Model\Workspace\Experiment\WorkflowNodeDetails)#13
> >>>>>>>>>>>>>>>>>>>>>>(10) {
> >>>>>>>>>>>>>>>>>>>>>>>>>>>["nodeInstanceId"]=>
> >>>>>>>>>>>>>>>>>>>>>>>>>>>    string(51)
> >>>>>>>>>>>>>>>>>>>>>>"IDontNeedaNode_320649b3-450b-4bdb-89cf-70a95ccb817e"
> >>>>>>>>>>>>>>>>>>>>>>>>>>>["creationTime"]=>
> >>>>>>>>>>>>>>>>>>>>>>>>>>>    int(1405021142316)
> >>>>>>>>>>>>>>>>>>>>>>>>>>>    ["nodeName"]=>
> >>>>>>>>>>>>>>>>>>>>>>>>>>>    string(14) "IDontNeedaNode"
> >>>>>>>>>>>>>>>>>>>>>>>>>>>    ["executionUnit"]=>
> >>>>>>>>>>>>>>>>>>>>>>>>>>>    int(1)
> >>>>>>>>>>>>>>>>>>>>>>>>>>>    ["executionUnitData"]=>
> >>>>>>>>>>>>>>>>>>>>>>>>>>>    NULL
> >>>>>>>>>>>>>>>>>>>>>>>>>>>    ["nodeInputs"]=>
> >>>>>>>>>>>>>>>>>>>>>>>>>>>    array(0) {
> >>>>>>>>>>>>>>>>>>>>>>>>>>>    }
> >>>>>>>>>>>>>>>>>>>>>>>>>>>    ["nodeOutputs"]=>
> >>>>>>>>>>>>>>>>>>>>>>>>>>>    array(0) {
> >>>>>>>>>>>>>>>>>>>>>>>>>>>    }
> >>>>>>>>>>>>>>>>>>>>>>>>>>>    ["workflowNodeStatus"]=>
> >>>>>>>>>>>>>>>>>>>>>>>>>>>
> >>>>>object(Airavata\Model\Workspace\Experiment\WorkflowNodeStatus)#14
> >>>>>>>>>>>>>>>>>>>>>>(2) {
> >>>>>>>>>>>>>>>>>>>>>>>>>>>["workflowNodeState"]=>
> >>>>>>>>>>>>>>>>>>>>>>>>>>>      int(7)
> >>>>>>>>>>>>>>>>>>>>>>>>>>>      ["timeOfStateChange"]=>
> >>>>>>>>>>>>>>>>>>>>>>>>>>>      int(1405021142334)
> >>>>>>>>>>>>>>>>>>>>>>>>>>>    }
> >>>>>>>>>>>>>>>>>>>>>>>>>>>    ["taskDetailsList"]=>
> >>>>>>>>>>>>>>>>>>>>>>>>>>>    array(1) {
> >>>>>>>>>>>>>>>>>>>>>>>>>>>      [0]=>
> >>>>>>>>>>>>>>>>>>>>>>>>>>>
> >>>>>object(Airavata\Model\Workspace\Experiment\TaskDetails)#15
> >>>>>>>>>>>>>>>>>>>>>>(14) {
> >>>>>>>>>>>>>>>>>>>>>>>>>>>        ["taskID"]=>
> >>>>>>>>>>>>>>>>>>>>>>>>>>>        string(51)
> >>>>>>>>>>>>>>>>>>>>>>"IDontNeedaNode_c2f6d21f-cd12-45c3-814f-a9c903fa5bde"
> >>>>>>>>>>>>>>>>>>>>>>>>>>>["creationTime"]=>
> >>>>>>>>>>>>>>>>>>>>>>>>>>>        NULL
> >>>>>>>>>>>>>>>>>>>>>>>>>>>        ["applicationId"]=>
> >>>>>>>>>>>>>>>>>>>>>>>>>>>        string(11) "SimpleEcho2"
> >>>>>>>>>>>>>>>>>>>>>>>>>>>        ["applicationVersion"]=>
> >>>>>>>>>>>>>>>>>>>>>>>>>>>        NULL
> >>>>>>>>>>>>>>>>>>>>>>>>>>>        ["applicationDeploymentId"]=>
> >>>>>>>>>>>>>>>>>>>>>>>>>>>        NULL
> >>>>>>>>>>>>>>>>>>>>>>>>>>>        ["applicationInputs"]=>
> >>>>>>>>>>>>>>>>>>>>>>>>>>>        array(1) {
> >>>>>>>>>>>>>>>>>>>>>>>>>>>          [0]=>
> >>>>>>>>>>>>>>>>>>>>>>>>>>>
> >>>>>object(Airavata\Model\Workspace\Experiment\DataObjectType)#16 (4) {
> >>>>>>>>>>>>>>>>>>>>>>>>>>>            ["key"]=>
> >>>>>>>>>>>>>>>>>>>>>>>>>>>            string(10) "echo_input"
> >>>>>>>>>>>>>>>>>>>>>>>>>>>            ["value"]=>
> >>>>>>>>>>>>>>>>>>>>>>>>>>>            string(23) "echo_output=Hello World"
> >>>>>>>>>>>>>>>>>>>>>>>>>>>            ["type"]=>
> >>>>>>>>>>>>>>>>>>>>>>>>>>>            int(0)
> >>>>>>>>>>>>>>>>>>>>>>>>>>>            ["metaData"]=>
> >>>>>>>>>>>>>>>>>>>>>>>>>>>            NULL
> >>>>>>>>>>>>>>>>>>>>>>>>>>>          }
> >>>>>>>>>>>>>>>>>>>>>>>>>>>        }
> >>>>>>>>>>>>>>>>>>>>>>>>>>>        ["applicationOutputs"]=>
> >>>>>>>>>>>>>>>>>>>>>>>>>>>        array(1) {
> >>>>>>>>>>>>>>>>>>>>>>>>>>>          [0]=>
> >>>>>>>>>>>>>>>>>>>>>>>>>>>
> >>>>>object(Airavata\Model\Workspace\Experiment\DataObjectType)#17 (4) {
> >>>>>>>>>>>>>>>>>>>>>>>>>>>            ["key"]=>
> >>>>>>>>>>>>>>>>>>>>>>>>>>>            string(11) "echo_output"
> >>>>>>>>>>>>>>>>>>>>>>>>>>>            ["value"]=>
> >>>>>>>>>>>>>>>>>>>>>>>>>>>            string(0) ""
> >>>>>>>>>>>>>>>>>>>>>>>>>>>            ["type"]=>
> >>>>>>>>>>>>>>>>>>>>>>>>>>>            int(0)
> >>>>>>>>>>>>>>>>>>>>>>>>>>>            ["metaData"]=>
> >>>>>>>>>>>>>>>>>>>>>>>>>>>            NULL
> >>>>>>>>>>>>>>>>>>>>>>>>>>>          }
> >>>>>>>>>>>>>>>>>>>>>>>>>>>        }
> >>>>>>>>>>>>>>>>>>>>>>>>>>>        ["taskScheduling"]=>
> >>>>>>>>>>>>>>>>>>>>>>>>>>>
> >>>>>object(Airavata\Model\Workspace\Experiment\ComputationalResourceScheduling)#18
> >>>>>>>>>>>>>>>>>>>>>>(9) {
> >>>>>>>>>>>>>>>>>>>>>>>>>>>["resourceHostId"]=>
> >>>>>>>>>>>>>>>>>>>>>>>>>>>          string(17) "trestles.sdsc.edu"
> >>>>>>>>>>>>>>>>>>>>>>>>>>>          ["totalCPUCount"]=>
> >>>>>>>>>>>>>>>>>>>>>>>>>>>          int(1)
> >>>>>>>>>>>>>>>>>>>>>>>>>>>          ["nodeCount"]=>
> >>>>>>>>>>>>>>>>>>>>>>>>>>>          int(1)
> >>>>>>>>>>>>>>>>>>>>>>>>>>>          ["numberOfThreads"]=>
> >>>>>>>>>>>>>>>>>>>>>>>>>>>          int(0)
> >>>>>>>>>>>>>>>>>>>>>>>>>>>          ["queueName"]=>
> >>>>>>>>>>>>>>>>>>>>>>>>>>>          string(6) "normal"
> >>>>>>>>>>>>>>>>>>>>>>>>>>>          ["wallTimeLimit"]=>
> >>>>>>>>>>>>>>>>>>>>>>>>>>>          int(15)
> >>>>>>>>>>>>>>>>>>>>>>>>>>>          ["jobStartTime"]=>
> >>>>>>>>>>>>>>>>>>>>>>>>>>>          int(566815272)
> >>>>>>>>>>>>>>>>>>>>>>>>>>>          ["totalPhysicalMemory"]=>
> >>>>>>>>>>>>>>>>>>>>>>>>>>>          int(0)
> >>>>>>>>>>>>>>>>>>>>>>>>>>>          ["computationalProjectAccount"]=>
> >>>>>>>>>>>>>>>>>>>>>>>>>>>          NULL
> >>>>>>>>>>>>>>>>>>>>>>>>>>>        }
> >>>>>>>>>>>>>>>>>>>>>>>>>>>        ["advancedInputDataHandling"]=>
> >>>>>>>>>>>>>>>>>>>>>>>>>>>        NULL
> >>>>>>>>>>>>>>>>>>>>>>>>>>>        ["advancedOutputDataHandling"]=>
> >>>>>>>>>>>>>>>>>>>>>>>>>>>        NULL
> >>>>>>>>>>>>>>>>>>>>>>>>>>>        ["taskStatus"]=>
> >>>>>>>>>>>>>>>>>>>>>>>>>>>
> >>>>>object(Airavata\Model\Workspace\Experiment\TaskStatus)#19
> >>>>>>>>>>>>>>>>>>>>>>(2) {
> >>>>>>>>>>>>>>>>>>>>>>>>>>>["executionState"]=>
> >>>>>>>>>>>>>>>>>>>>>>>>>>>          int(12)
> >>>>>>>>>>>>>>>>>>>>>>>>>>>          ["timeOfStateChange"]=>
> >>>>>>>>>>>>>>>>>>>>>>>>>>>          int(1405021142382)
> >>>>>>>>>>>>>>>>>>>>>>>>>>>        }
> >>>>>>>>>>>>>>>>>>>>>>>>>>>        ["jobDetailsList"]=>
> >>>>>>>>>>>>>>>>>>>>>>>>>>>        array(0) {
> >>>>>>>>>>>>>>>>>>>>>>>>>>>        }
> >>>>>>>>>>>>>>>>>>>>>>>>>>>        ["dataTransferDetailsList"]=>
> >>>>>>>>>>>>>>>>>>>>>>>>>>>        array(0) {
> >>>>>>>>>>>>>>>>>>>>>>>>>>>        }
> >>>>>>>>>>>>>>>>>>>>>>>>>>>        ["errors"]=>
> >>>>>>>>>>>>>>>>>>>>>>>>>>>        array(0) {
> >>>>>>>>>>>>>>>>>>>>>>>>>>>        }
> >>>>>>>>>>>>>>>>>>>>>>>>>>>      }
> >>>>>>>>>>>>>>>>>>>>>>>>>>>    }
> >>>>>>>>>>>>>>>>>>>>>>>>>>>    ["errors"]=>
> >>>>>>>>>>>>>>>>>>>>>>>>>>>    array(0) {
> >>>>>>>>>>>>>>>>>>>>>>>>>>>    }
> >>>>>>>>>>>>>>>>>>>>>>>>>>>}
> >>>>>>>>>>>>>>>>>>>>>>>>>>>}
> >>>>>>>>>>>>>>>>>>>>>>>>>>>["errors"]=>
> >>>>>>>>>>>>>>>>>>>>>>>>>>>NULL
> >>>>>>>>>>>>>>>>>>>>>>>>>>>}
> >>>>>>>>>>>>>>>>>>>>>>>>>>>
> >>>>>>>>>>>>>>>>>>>>>>>>>>>john@anya
> >>>>>:/media/mdhpss/scigap/phpclientsamples/airavata/airavata-api/airavata-client-sdks/airavata-php-sdk/src/main/resources/php-cli-samples$
> >>>>>>>>>>>>>>>>>>>>>>>>>>>On Thu, Jul 10, 2014 at 03:32:03PM -0400, Marlon
> >>>>>Pierce
> >>>>>>>>>>>>>>>>>>>>>>>>>>>wrote:
> >>>>>>>>>>>>>>>>>>>>>>>>>>>>Yes, probably a casualty of our updates.
> >>>>>>>>>>>>>>>>>>>>>>>>>>>>
> >>>>>>>>>>>>>>>>>>>>>>>>>>>>Marlon
> >>>>>>>>>>>>>>>>>>>>>>>>>>>>
> >>>>>>>>>>>>>>>>>>>>>>>>>>>>On 7/10/14, 3:19 PM, K Yoshimoto wrote:
> >>>>>>>>>>>>>>>>>>>>>>>>>>>>>I launched a test experiment yesterday, but it
> >>>>>hasn't
> >>>>>>>>>>>>>>>>>>>>>>>>>>>>>changed from
> >>>>>>>>>>>>>>>>>>>>>>>>>>>>>LAUNCHED status.  Should it go into running
> >>>>>>>>>>>>>>>>>>>>>>>>>>>>>fairly
> >>>>>>>>>>>>>>>>>>>>>>>>>>>>>quickly?
> >>>>>>>>>>>>>>>>>>>>>>>>>>>>>
> >>>>>>>>>>>>>>>>>>>>>>>>>>>>>php getExperimentStatus.php
> >>>>>>>>>>>>>>>>>>>>>>>>>>>>>kennethexp1_5497b1a2-721e-4690-9e4c-e0f24693c5c1
> >>>>>>>>>>>>>>>>>>>>>>>>>>>>>experiment status = LAUNCHED
> >>>>>>>>>>>>>>>>>>>>>>>>>>>>><br>
> >>>>>>>>>>>>>>>>>>>>>>>>>>>>>
> >>>>>>>>>>>>>>>>>>>>>>>>>>>>>
> >>>>>>>>>>>>>>>>>>>>>>>>>>>>>On Thu, Jul 10, 2014 at 06:03:12AM -0400, 
> >>>>>>>>>>>>>>>>>>>>>>>>>>>>>Marlon
> >>>>>>>>>>>>>>>>>>>>>>>>>>>>>Pierce wrote:
> >>>>>>>>>>>>>>>>>>>>>>>>>>>>>>He'll still need his classpath set properly to
> >>>>>run
> >>>>>>>>>>>>>>>>>>>>>>>>>>>>>>them
> >>>>>>>>>>>>>>>>>>>>>>>>>>>>>>from the
> >>>>>>>>>>>>>>>>>>>>>>command
> >>>>>>>>>>>>>>>>>>>>>>>>>>>>>>line.  Do we have instructions for this?
> >>>>>>>>>>>>>>>>>>>>>>>>>>>>>>
> >>>>>>>>>>>>>>>>>>>>>>>>>>>>>>Also, the lowest level pom.xml file is
> >>>>>>>>>>>>>>>>>>>>>>>>>>>>>>
> >>>>>airavata/airavata-api//airavata-client-sdks/java-client-samples/pom.xml
> >>>>>>>>>>>>>>>>>>>>>>>>>>>>>>so that is where to run "mvn clean install" if
> >>>>>>>>>>>>>>>>>>>>>>>>>>>>>>recompiling
> >>>>>>>>>>>>>>>>>>>>>>>>>>>>>>after
> >>>>>>>>>>>>>>>>>>>>>>making
> >>>>>>>>>>>>>>>>>>>>>>>>>>>>>>changes.
> >>>>>>>>>>>>>>>>>>>>>>>>>>>>>>
> >>>>>>>>>>>>>>>>>>>>>>>>>>>>>>Or use an IDE to manage recompiles, I guess.
> >>>>>>>>>>>>>>>>>>>>>>>>>>>>>>
> >>>>>>>>>>>>>>>>>>>>>>>>>>>>>>Marlon
> >>>>>>>>>>>>>>>>>>>>>>>>>>>>>>
> >>>>>>>>>>>>>>>>>>>>>>>>>>>>>>On 7/9/14, 9:01 PM, Suresh Marru wrote:
> >>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>Hi Kenneth,
> >>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>
> >>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>Airavata uses Maven as the build system. Once
> >>>>>you
> >>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>checkout
> >>>>>>>>>>>>>>>>>>>>>>Airavata, you
> >>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>should be able to build "mvn clean install
> >>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>-DskipTests=true -f
> >>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>
> >>>>>airavata-api/airavata-client-sdks/java-client-samples/pom.xml"
> >>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>If you are building from git master, you may
> >>>>>need to
> >>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>build the
> >>>>>>>>>>>>>>>>>>>>>>whole of
> >>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>airavata repo. Alternatively, users are
> >>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>provided
> >>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>with
> >>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>binaries.
> >>>>>>>>>>>>>>>>>>>>>>And
> >>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>changes to samples with release versions can 
> >>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>be
> >>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>build
> >>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>without
> >>>>>>>>>>>>>>>>>>>>>>having to
> >>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>build the whole repo.
> >>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>
> >>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>As an example, if you modify samples within
> >>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>
> >>>>>https://github.com/apache/airavata/tree/airavata-0.12 you
> >>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>can
> >>>>>>>>>>>>>>>>>>>>>>just go to
> >>>>>>>>>>>>>>>>>>>>>>
> >>>>>airavata/airavata-api/airavata-client-sdks/java-client-samples/src/main/java/org/apache/airavata/client/samples
> >>>>>>>>>>>>>>>>>>>>>>and build just the changed samples by running mvn 
> >>>>>>>>>>>>>>>>>>>>>>clean
> >>>>>>>>>>>>>>>>>>>>>>install
> >>>>>>>>>>>>>>>>>>>>>>-DskipTests=true.
> >>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>Long story short, release artifacts are
> >>>>>published
> >>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>to maven
> >>>>>>>>>>>>>>>>>>>>>>central, so
> >>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>building a module will pull the artifacts 
> >>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>from
> >>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>maven central
> >>>>>>>>>>>>>>>>>>>>>>repo -
> >>>>>>>>>>>>>>>>>http://search.maven.org/#search%7Cga%7C1%7Capache%20airavata
> >>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>Suresh
> >>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>
> >>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>
> >>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>On Jul 9, 2014, at 7:38 PM, K Yoshimoto
> >>>>>>>>>>>>>>>>>>>>>>>>>>>>>>><kenneth@sdsc.edu>
> >>>>>>>>>>>>>>>>>>>>>>wrote:
> >>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>Another question:  is there a Makefile for 
> >>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>the
> >>>>>java
> >>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>examples?
> >>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>
> >>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>
> >>>>>airavata/airavata-api/airavata-client-sdks/java-client-samples/src/main/java/org/apache/airavata/client/samples
> >>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>On Wed, Jul 09, 2014 at 04:32:21PM -0400,
> >>>>>Suresh
> >>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>Marru
> >>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>wrote:
> >>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>Hi Kenneth,
> >>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>
> >>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>I changed the script names to patch the API
> >>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>function
> >>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>names.
> >>>>>>>>>>>>>>>>>>>>>>So it is
> >>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>now
> >>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>- registerComputeResource.php
> >>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>
> >>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>I am going to finish up the Wiki articles 
> >>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>[1]
> >>>>>will
> >>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>describe
> >>>>>>>>>>>>>>>>>>>>>>all the
> >>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>functions you can do and available samples.
> >>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>
> >>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>Suresh
> >>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>[1] -
> >>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>
> >>>>>https://cwiki.apache.org/confluence/display/AIRAVATA/Airavata+API+PHP+Client+Samples
> >>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>On Jul 9, 2014, at 4:25 PM, K Yoshimoto
> >>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>><kenneth@sdsc.edu
> >>>>>>>>>>>>>>>>>>>>>>wrote:
> >>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>I did a git pull, and
> >>>>>add-compute-resource.php
> >>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>does
> >>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>not seem
> >>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>to be there anymore.  Should it still be
> >>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>available?
> >>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>
> >>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>On Thu, Jul 03, 2014 at 01:34:18PM -0700, 
> >>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>K
> >>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>Yoshimoto
> >>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>wrote:
> >>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>Thanks, Marlon and Suresh.  I'll poke
> >>>>>through
> >>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>the app
> >>>>>>>>>>>>>>>>>>>>>>catalog api
> >>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>and try out the examples in the new 
> >>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>README
> >>>>>next
> >>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>week.
> >>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>
> >>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>Kenneth
> >>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>
> >>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>On Thu, Jul 03, 2014 at 04:19:21PM -0400,
> >>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>Marlon Pierce
> >>>>>>>>>>>>>>>>>>>>>>wrote:
> >>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>In short, though, if a script in this
> >>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>directory is
> >>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>not in
> >>>>>>>>>>>>>>>>>>>>>>the
> >>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>README, it is using the App Catalog part
> >>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>of
> >>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>the API.
> >>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>add-compute-resource.php does some of 
> >>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>what
> >>>>>you
> >>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>are
> >>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>looking
> >>>>>>>>>>>>>>>>>>>>>>for
> >>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>below. I'll make some quick updates to 
> >>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>the
> >>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>readme.
> >>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>
> >>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>Marlon
> >>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>
> >>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>On 7/3/14, 4:06 PM, Suresh Marru wrote:
> >>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>Hi Kenneth,
> >>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>
> >>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>I plan to modify the README to describe
> >>>>>the
> >>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>use cases
> >>>>>>>>>>>>>>>>>>>>>>including the
> >>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>one you mention below. Will try to get
> >>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>all
> >>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>that done
> >>>>>>>>>>>>>>>>>>>>>>before Monday.
> >>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>Suresh
> >>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>
> >>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>On Jul 3, 2014, at 4:04 PM, Marlon 
> >>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>Pierce
> >>>>><
> >>>>>>>>>>>>>>>>>>>>>>marpierc@iu.edu> wrote:
> >>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>Hi Kenneth--
> >>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>
> >>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>At the API level, those are part of 
> >>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>the
> >>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>Application
> >>>>>>>>>>>>>>>>>>>>>>Catalog.  At
> >>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>the implementation level, they are 
> >>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>done
> >>>>>by
> >>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>GFAC
> >>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>plugins
> >>>>>>>>>>>>>>>>>>>>>>(GSI-SSH
> >>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>plugin in this case).   These are new
> >>>>>(not
> >>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>yet in the
> >>>>>>>>>>>>>>>>>>>>>>README), may
> >>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>be missing some examples.
> >>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>
> >>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>Marlon
> >>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>
> >>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>On 7/3/14, 3:45 PM, K Yoshimoto wrote:
> >>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>Are there methods in the API for
> >>>>>creating
> >>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>working
> >>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>dirs
> >>>>>>>>>>>>>>>>>>>>>>on the
> >>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>compute resource, staging input data,
> >>>>>and
> >>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>running
> >>>>>>>>>>>>>>>>>>>>>>submit wrapper
> >>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>scripts?
> >>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>
> >>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>I'm looking at:
> >>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>
> >>>>>https://github.com/SciGaP/Airavata-PHP-Client-Samples/blob/master/client-samples/README-PHP-CLI-Examples.txt
> >>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>and browsing through:
> >>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>
> >>>>>airavata/airavata-api/airavata-client-sdks/airavata-php-sdk/src/main/resources/lib/Airavata/API/Airavata.php
> >>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>but it looks like the interactions 
> >>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>with
> >>>>>the
> >>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>compute
> >>>>>>>>>>>>>>>>>>>>>>resource are
> >>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>deeper
> >>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>down...
> >>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>To unsubscribe from this group and stop
> >>>>>receiving
> >>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>emails
> >>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>from
> >>>>>>>>>>>>>>>>>>>>>>it, send an
> >>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>email to dev+unsubscribe@scigap.org.
> >>>>>>>>>>>>>>>>>>>>>>>>>>>>>To unsubscribe from this group and stop 
> >>>>>>>>>>>>>>>>>>>>>>>>>>>>>receiving
> >>>>>>>>>>>>>>>>>>>>>>>>>>>>>emails
> >>>>>>>>>>>>>>>>>>>>>>>>>>>>>from it,
> >>>>>>>>>>>>>>>>>>>>>>send an
> >>>>>>>>>>>>>>>>>>>>>>>>>>>>>email to dev+unsubscribe@scigap.org.
> >>>>>>>>>>>>>>>>>>>>>>>>>>>>To unsubscribe from this group and stop 
> >>>>>>>>>>>>>>>>>>>>>>>>>>>>receiving
> >>>>>>>>>>>>>>>>>>>>>>>>>>>>emails
> >>>>>>>>>>>>>>>>>>>>>>>>>>>>from it,
> >>>>>>>>>>>>>>>>>>>>>>send an
> >>>>>>>>>>>>>>>>>>>>>>>>>>>>email to dev+unsubscribe@scigap.org.
> >>>>>>>>>>>>>>>>>>>>>>>>>>>To unsubscribe from this group and stop receiving
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> >>>>>>>>>>>>>>>>>>>>>>>>from
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> >>>>>>>>>>>>>>>>>>>>>>
> >>>>>>>>>>>>>>>>>>>>>>To unsubscribe from this group and stop receiving 
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> >>>>>>>>>>>>>>>>>>>>>>email to dev+unsubscribe@scigap.org.
> >>>>>>>>>>>>>>>>>>>>>>
> >>>>>>>>>>>>>>>>>>>>>To unsubscribe from this group and stop receiving 
> >>>>>>>>>>>>>>>>>>>>>emails
> >>>>>from
> >>>>>>>>>>>>>>>>>>>>>it,
> >>>>>>>>>>>>>>>>>>>>>send an email to dev+unsubscribe@scigap.org.
> >>>>>>>>>>>>>>>>>>>>To unsubscribe from this group and stop receiving emails
> >>>>>from
> >>>>>>>>>>>>>>>>>>>>it,
> >>>>>>>>>>>>>>>>>>>>send an email to dev+unsubscribe@scigap.org.
> >>>>>>>>>>>>>>>>>>>To unsubscribe from this group and stop receiving emails
> >>>>>from
> >>>>>>>>>>>>>>>>>>>it,
> >>>>>>>>>>>>>>>>>>>send an email to dev+unsubscribe@scigap.org.
> >>>>>>>>>>>>>>>>>----- End forwarded message -----
> >>>>>>>>>>>>>>>>>
> >>>>>>>>>>>>>>>>>To unsubscribe from this group and stop receiving emails 
> >>>>>>>>>>>>>>>>>from
> >>>>>it,
> >>>>>>>>>>>>>>>>>send an
> >>>>>>>>>>>>>>>>>email to dev+unsubscribe@scigap.org.
> >>>>>>>>>>>>>>>>>
> >>>>>>>>>>>>>>>>--
> >>>>>>>>>>>>>>>>System Analyst Programmer
> >>>>>>>>>>>>>>>>PTI Lab
> >>>>>>>>>>>>>>>>Indiana University
> >>>>>>>>>>>>>>>>
> >>>>>>>>>>>>>>>--
> >>>>>>>>>>>>>>>System Analyst Programmer
> >>>>>>>>>>>>>>>PTI Lab
> >>>>>>>>>>>>>>>Indiana University
> >>>>>>>>>>>>>>>
> >>>>>>>>>>>>>>>To unsubscribe from this group and stop receiving emails from
> >>>>>it,
> >>>>>>>>>>>>>>>send an email to dev+unsubscribe@scigap.org.
> >>>>>>>>>>>>>>To unsubscribe from this group and stop receiving emails from
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> >>>>>>>>>>>>>To unsubscribe from this group and stop receiving emails from 
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> >>>>>>>>>>>>>send an email to dev+unsubscribe@scigap.org.
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> >>>>>>>>>>>>it,
> >>>>>send
> >>>>>>>>>>>>an email to dev+unsubscribe@scigap.org.
> >>>>>>>>>>>To unsubscribe from this group and stop receiving emails from it,
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> >>>>>>>>To unsubscribe from this group and stop receiving emails from it, 
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> >>>>>an
> >>>>>>>>email to dev+unsubscribe@scigap.org.
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> >>>>>To unsubscribe from this group and stop receiving emails from it, send 
> >>>>>an
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> >>>>>
> >>>>
> >>>>-- 
> >>>>System Analyst Programmer
> >>>>PTI Lab
> >>>>Indiana University
> >>>To unsubscribe from this group and stop receiving emails from it, send an
> >>>email to dev+unsubscribe@scigap.org.
> >>To unsubscribe from this group and stop receiving emails from it, send an
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