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From Nadeem Anjum <nadeem.cs....@gmail.com>
Subject Re: Error while building airavata
Date Wed, 05 Mar 2014 18:32:40 GMT
Hi Marlon,

I had built with "mvn clean install -Dmaven.test.skip=true" itself. This
skips the other tests, but still builds Airavata Integration tests.

Moreover, I am building the 0.11 release, that should not have the recent
changes right?

Thanks,
Nadeem


On Wed, Mar 5, 2014 at 11:57 PM, Marlon Pierce <marpierc@iu.edu> wrote:

> Try "mvn clean install -Dmaven.test.skip=true" to skip the integration
> tests.  Airavata is undergoing a lot of fundamental changes as we work
> out the Thrift API, and this has broken many older tests.
>
>
> Marlon
>
> On 3/5/14 1:13 PM, Nadeem Anjum wrote:
> > Thanks Supun. I fixed the previous issue with your suggestion.
> >
> > But I am still getting an error towards the end while building
> Integration
> > Tests. Below are last few lines of the log. Any ideas on how to fix this?
> >
> >
> LOG:______________________________________________________________________
> > [INFO] [talledLocalContainer]   ... 29 more
> > [INFO] [talledLocalContainer] Caused by: java.lang.RuntimeException:
> > Database fa
> > ilure
> > [INFO] [talledLocalContainer]   at
> > org.apache.airavata.registry.services.Registr
> > yService.initializeDB(RegistryService.java:140)
> > [INFO] [talledLocalContainer]   at
> > org.apache.airavata.registry.services.Registr
> > yService.startUp(RegistryService.java:64)
> > [INFO] [talledLocalContainer]   at
> > org.apache.axis2.deployment.ServiceBuilder.lo
> > adServiceLifeCycleClass(ServiceBuilder.java:518)
> > [INFO] [talledLocalContainer]   ... 30 more
> > [INFO] [talledLocalContainer] [INFO]
> > org.apache.axis2.deployment.DeploymentExcep
> > tion: Database failure
> > [INFO] [talledLocalContainer] [INFO] Deploying Web service:
> > airavata-simple-math
> > -service-0.11.aar -
> > file:/C:/Users/Nadeem/workspace/airavata-airavata-0.11/modul
> >
> es/integration-tests/target/apache-tomcat-7.0.41/webapps/airavata-server/WEB-INF
> > /services/airavata-simple-math-service-0.11.aar
> > [INFO] [talledLocalContainer]
> > DriverClassName=org.apache.derby.jdbc.ClientDriver
> >
> ,Url=jdbc:derby://localhost:1527/persistent_data;create=true;user=airavata;passw
> > ord=airavata,Username=airavata,Password=airavata,validationQuery=SELECT 1
> > from C
> >
> onfiguration,MaxActive=10,MaxIdle=5,MinIdle=2,MaxWait=60000,testWhileIdle=true,t
> > estOnBorrow=true
> > [INFO] [talledLocalContainer] 1  airavata_data  INFO   [Thread-6]
> > openjpa.Runtim
> > e - Starting OpenJPA 2.2.0
> > [INFO] [talledLocalContainer] 27  airavata_data  INFO   [Thread-6]
> > openjpa.jdbc.
> > JDBC - Using dictionary class
> "org.apache.openjpa.jdbc.sql.DerbyDictionary"
> > (Apa
> > che Derby 10.9.1.0 - (1344872) ,Apache Derby Network Client JDBC Driver
> > 10.9.1.0
> >  - (1344872)).
> > [INFO] [talledLocalContainer] [INFO] Deploying Web service:
> > airavata-xbaya-gui-0
> > .11.jar -
> > file:/C:/Users/Nadeem/workspace/airavata-airavata-0.11/modules/integra
> >
> tion-tests/target/apache-tomcat-7.0.41/webapps/airavata-server/WEB-INF/services/
> > airavata-xbaya-gui-0.11.jar
> > [INFO] [talledLocalContainer] [INFO] Deploying Web service:
> > echo-service-0.11.aa
> > r -
> >
> file:/C:/Users/Nadeem/workspace/airavata-airavata-0.11/modules/integration-t
> >
> ests/target/apache-tomcat-7.0.41/webapps/airavata-server/WEB-INF/services/echo-s
> > ervice-0.11.aar
> > [INFO] [talledLocalContainer] [INFO] Deploying Web service:
> > version-1.5.1.aar -
> >
> file:/C:/Users/Nadeem/workspace/airavata-airavata-0.11/modules/integration-tests
> >
> /target/apache-tomcat-7.0.41/webapps/airavata-server/WEB-INF/services/version-1.
> > 5.1.aar
> > [INFO] [talledLocalContainer] Mar 05, 2014 11:30:17 PM
> > org.apache.catalina.start
> > up.HostConfig deployWAR
> > [INFO] [talledLocalContainer] INFO: Deploying web application archive
> > C:\Users\N
> >
> adeem\workspace\airavata-airavata-0.11\modules\integration-tests\target\apache-t
> > omcat-7.0.41\webapps\airavata.war
> > [INFO] [yer.DeployerWatchdog] Deployable [
> > http://localhost:8080/cargocpc/index.h
> > tml] failed to finish deploying within the timeout period [120000]. The
> > Deployab
> > le state is thus unknown.
> > [INFO]
> > ------------------------------------------------------------------------
> > [INFO] Reactor Summary:
> > [INFO]
> > [INFO] Airavata .......................................... SUCCESS [
>  9.553
> > s]
> > [INFO] Airavata Commons .................................. SUCCESS [
>  0.175
> > s]
> > [INFO] Airavata Common Utilities ......................... SUCCESS [
> 11.220
> > s]
> > [INFO] Airavata GFac Schema Utilities .................... SUCCESS [01:11
> > min]
> > [INFO] Airavata Registry ................................. SUCCESS [
>  0.134
> > s]
> > [INFO] Airavata Registry API ............................. SUCCESS [
>  8.761
> > s]
> > [INFO] Airavata Workflow Model Parent .................... SUCCESS [
>  0.076
> > s]
> > [INFO] Airavata Workflow Model Core ...................... SUCCESS [
> 12.022
> > s]
> > [INFO] Airavata WS Messenger ............................. SUCCESS [
>  0.144
> > s]
> > [INFO] Airavata Messenger Commons ........................ SUCCESS [
>  7.035
> > s]
> > [INFO] Airavata Messenger Client ......................... SUCCESS [
>  7.800
> > s]
> > [INFO] Airavata WS Monitor ............................... SUCCESS [
>  5.838
> > s]
> > [INFO] Airavata Workflow Execution Context ............... SUCCESS [
> 14.451
> > s]
> > [INFO] Airavata Thrift ................................... SUCCESS [
>  0.113
> > s]
> > [INFO] Airavata Interpreter Service ...................... SUCCESS [
>  9.276
> > s]
> > [INFO] Airavata Interpreter Service Client ............... SUCCESS [
>  2.014
> > s]
> > [INFO] Airavata Client ................................... SUCCESS [
> 45.515
> > s]
> > [INFO] Airavata Workflow Tracking ........................ SUCCESS [
> 35.333
> > s]
> > [INFO] Airavata Credential Store ......................... SUCCESS [
>  6.539
> > s]
> > [INFO] GSISSH Library .................................... SUCCESS [
> 20.706
> > s]
> > [INFO] Airavata GFac ..................................... SUCCESS [
>  0.066
> > s]
> > [INFO] Airavata GFac Core ................................ SUCCESS [
> 44.143
> > s]
> > [INFO] Airavata GFac Core ................................ SUCCESS [
>  8.396
> > s]
> > [INFO] Airavata Message Box .............................. SUCCESS [
>  7.185
> > s]
> > [INFO] Airavata Message Broker ........................... SUCCESS [
> 10.017
> > s]
> > [INFO] Airavata Workflow Component ....................... SUCCESS [
>  3.935
> > s]
> > [INFO] Airavata Workflow Component Node .................. SUCCESS [
>  0.939
> > s]
> > [INFO] Complex Math Service .............................. SUCCESS [
>  1.962
> > s]
> > [INFO] Echo Service ...................................... SUCCESS [
>  1.424
> > s]
> > [INFO] Levenshtein Distance Service ...................... SUCCESS [
>  1.563
> > s]
> > [INFO] Simple Math Service ............................... SUCCESS [
>  1.608
> > s]
> > [INFO] samples ........................................... SUCCESS [
>  0.111
> > s]
> > [INFO] Airavata Samples .................................. SUCCESS [
>  3.433
> > s]
> > [INFO] Airavata JPA Registry ............................. SUCCESS [
> 21.636
> > s]
> > [INFO] Airavata REST ..................................... SUCCESS [
>  0.122
> > s]
> > [INFO] airavata-rest-mappings ............................ SUCCESS [
>  6.194
> > s]
> > [INFO] airavata-rest-client .............................. SUCCESS [
>  9.103
> > s]
> > [INFO] Airavata XBaya .................................... SUCCESS [01:04
> > min]
> > [INFO] Airavata JSON ..................................... SUCCESS [
>  2.264
> > s]
> > [INFO] Airavata Registry Service ......................... SUCCESS [
>  5.493
> > s]
> > [INFO] Airavata Registry Test ............................ SUCCESS [
>  1.690
> > s]
> > [INFO] Airavata Security Implementation .................. SUCCESS [
>  4.300
> > s]
> > [INFO] airavata-rest-services ............................ SUCCESS [
>  8.155
> > s]
> > [INFO] airavata-rest-service-webapp ...................... SUCCESS [
> 18.878
> > s]
> > [INFO] Airavata Interpreter Service Handler .............. SUCCESS [
> 11.737
> > s]
> > [INFO] Airavata Tools .................................... SUCCESS [
>  0.103
> > s]
> > [INFO] Airavata Phoebus Integration ...................... SUCCESS [
>  9.698
> > s]
> > [INFO] registry-tool ..................................... SUCCESS [
> 10.514
> > s]
> > [INFO] SampleGateway Maven Webapp ........................ SUCCESS [
> 18.346
> > s]
> > [INFO] distribution ...................................... SUCCESS [
>  0.122
> > s]
> > [INFO] Samples - Airavata Client Samples ................. SUCCESS [
>  0.111
> > s]
> > [INFO] Samples - Workflow Create Application ............. SUCCESS [
>  5.839
> > s]
> > [INFO] Samples - Workflow Execution ...................... SUCCESS [
>  5.045
> > s]
> > [INFO] Airavata Embedded Tomcat Implementation ........... SUCCESS [
>  4.155
> > s]
> > [INFO] Airavata Test Suite ............................... SUCCESS [
>  4.902
> > s]
> > [INFO] Airavata server distribution ...................... SUCCESS [02:33
> > min]
> > [INFO] Airavata client distribution ...................... SUCCESS [
> 37.303
> > s]
> > [INFO] Airavata xbaya-gui distribution ................... SUCCESS [03:45
> > min]
> > [INFO] Airavata release artifacts ........................ SUCCESS [
> 37.635
> > s]
> > [INFO] Airavata Integration Tests ........................ FAILURE [04:16
> > min]
> > [INFO]
> > ------------------------------------------------------------------------
> > [INFO] BUILD FAILURE
> > [INFO]
> > ------------------------------------------------------------------------
> > [INFO] Total time: 21:20 min
> > [INFO] Finished at: 2014-03-05T23:30:24+05:30
> > [INFO] Final Memory: 68M/1262M
> > [INFO]
> > ------------------------------------------------------------------------
> > [ERROR] Failed to execute goal
> > org.codehaus.cargo:cargo-maven2-plugin:1.3.1:star
> > t (start-container) on project integration-tests: Execution
> start-container
> > of g
> > oal org.codehaus.cargo:cargo-maven2-plugin:1.3.1:start failed: Failed to
> > start t
> > he Tomcat 7.x container. Deployable [
> > http://localhost:8080/cargocpc/index.html]
> > failed to finish deploying within the timeout period [120000]. The
> > Deployable st
> > ate is thus unknown. -> [Help 1]
> >
> ____________________________________________________________________________
> >
> > Thanks,
> > Nadeem.
> >
> >
> > On Wed, Mar 5, 2014 at 10:34 PM, Supun Nakandala
> > <supun.nakandala@gmail.com>wrote:
> >
> >> Hi Nadeem,
> >>
> >> I also got this error sometimes. Since I had previously build Airavata
> >> successfully  in my local machine I used the maven offline build (mvn -o
> >> clean install) so that the dependencies are not downloaded again from
> >> remote sites.
> >>
> >> Regards
> >> Supun
> >>
> >>
> >>
> >> On Wed, Mar 5, 2014 at 10:22 PM, Nadeem Anjum <nadeem.cs.iit@gmail.com
> >wrote:
> >>
> >>> Hi all,
> >>>
> >>> I am getting the following error while building airavata from source
> >>> (0.11 release):
> >>> ______________________________________________________________________
> >>>
> >>> Downloading:
> >>>
> http://community.ucs.indiana.edu:9090/archiva/repository/ogce.m2.all/de/fzj/unicore/jsdl-xmlbeans/2.1.1-SNAPSHOT/maven-metadata.xml
> >>> [WARNING] Could not transfer metadata
> >>> de.fzj.unicore:jsdl-xmlbeans:2.1.1-SNAPSHOT/maven-metadata.xml from/to
> >>> ogce.m2.all (
> >>> http://community.ucs.indiana.edu:9090/archiva/repository/ogce.m2.all):
> >>> community.ucs.indiana.edu
> >>> [WARNING] Failure to transfer
> >>> de.fzj.unicore:jsdl-xmlbeans:2.1.1-SNAPSHOT/maven-metadata.xml from
> >>> http://community.ucs.indiana.edu:9090/archiva/repository/ogce.m2.allwas
> >>> cached in the local repository, resolution will not be reattempted
> until
> >>> the update interval of ogce.m2.all has elapsed or updates are forced.
> >>> Original error: Could not transfer metadata
> >>> de.fzj.unicore:jsdl-xmlbeans:2.1.1-SNAPSHOT/maven-metadata.xml from/to
> >>> ogce.m2.all (
> >>> http://community.ucs.indiana.edu:9090/archiva/repository/ogce.m2.all):
> >>> community.ucs.indiana.edu
> >>>
> >>> [ERROR] Failed to execute goal on project airavata-gfac-core: Could not
> >>> resolve dependencies for project
> >>> org.apache.airavata:airavata-gfac-core:jar:0.11: Failed to collect
> >>> dependencies at eu.unicore:ogsabes-client:jar:1.7.0-rc ->
> >>> eu.unicore:uas-client:jar:1.7.0-rc ->
> >>> eu.unicore.services:use-wsrfclient:jar:3.0.0-rc ->
> >>> org.apache.xmlbeans:xmlbeans-xpath:jar:2.6.0 ->
> net.sf.saxon:saxon:jar:9:
> >>> Failed to read artifact descriptor for net.sf.saxon:saxon:jar:9: Could
> not
> >>> transfer artifact net.sf.saxon:saxon:pom:9 from/to ogce.m2.all (
> >>> http://community.ucs.indiana.edu:9090/archiva/repository/ogce.m2.all):
> >>> community.ucs.indiana.edu: Unknown host community.ucs.indiana.edu ->
> >>> [Help 1]
> >>>
> >>>
> __________________________________________________________________________________________________
> >>>
> >>> Apparently,
> >>> http://community.ucs.indiana.edu:9090/archiva/repository/ogce.m2.all
> >>> is'nt accessible over browser as well.
> >>>
> >>> Could anyone suggest a possible solution?
> >>>
> >>> Thanks,
> >>> Nadeem
> >>>
> >>
> >>
> >> --
> >> Thank you
> >> Supun Nakandala
> >> Dept. Computer Science and Engineering
> >> University of Moratuwa
> >>
>
>

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