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From Suresh Marru <sma...@apache.org>
Subject Re: [DISCUSS] Apache Airavata release 0.10 - RC1
Date Tue, 05 Nov 2013 15:26:38 GMT
Hi Amila,,

Are you still seeing this issue? Sorry I did not try and reproduce.

Suresh

From:  Amila Jayasekara <thejaka.amila@gmail.com>
Reply-To:  Airavata Dev <dev@airavata.apache.org>
Date:  Friday, November 1, 2013 at 2:01 PM
To:  Airavata Dev <dev@airavata.apache.org>
Subject:  Re: [DISCUSS] Apache Airavata release 0.10 - RC1

> When I try to run sample-gateway tests I get following behavior.
> 
> The job seems to be successfully getting submitted to resource and I am
> getting following output [1] in the server;
> But my test case is not returning with the output.
> 
> Can someone please check whether there is an API change that needs to be
> incorporated into org.apache.airavata.sample.gateway.executor.WorkflowExecutor
> ?
> 
> Thanks
> Amila
> 
> 
> 
> [1] 
> DriverClassName=org.apache.derby.jdbc.ClientDriver,Url=jdbc:derby://localhost:
> 1527/persistent_data;create=true;user=airavata;password=airavata,Username=aira
> vata,Password=airavata,validationQuery=SELECT 1 from
> Configuration,MaxActive=10,MaxIdle=5,MinIdle=2,MaxWait=60000,testWhileIdle=tru
> e,testOnBorrow=true
> 47  airavata_data  INFO   [http-bio-8080-exec-2] openjpa.Runtime - Starting
> OpenJPA 2.2.0
> 116  airavata_data  INFO   [http-bio-8080-exec-2] openjpa.jdbc.JDBC - Using
> dictionary class "org.apache.openjpa.jdbc.sql.DerbyDictionary" (Apache Derby
> 10.9.1.0 - (1344872) ,Apache Derby Network Client JDBC Driver 10.9.1.0 -
> (1344872)).
> [INFO] Experiment launched :Echo_99aeaa4f-7a0a-468b-bd48-d8d5410bf87b
> [INFO] Invoking ApplicationDescriptorCheckHandler ...
> [INFO] Invoking GramDirectorySetupHandler ...
> [WARN] Error closing connection.
> [INFO] Could not find credentials for token - null and gateway id - null
> [INFO] Host FTP = gsiftp://trestles-dm1.sdsc.edu:2811
> <http://trestles-dm1.sdsc.edu:2811>
> [INFO] temp directory = gsiftp://trestles-dm1.sdsc.edu:2811//home/ogce/scratch
> <http://trestles-dm1.sdsc.edu:2811//home/ogce/scratch>
> [INFO] Working directory =
> gsiftp://trestles-dm1.sdsc.edu:2811//home/ogce/scratch/Echo_Fri_Nov_01_14_54_4
> 6_EDT_2013_ebabb487-cba4-45f9-b37b-cdde9b0f43fa
> <http://trestles-dm1.sdsc.edu:2811//home/ogce/scratch/Echo_Fri_Nov_01_14_54_46
> _EDT_2013_ebabb487-cba4-45f9-b37b-cdde9b0f43fa>
> [INFO] Input directory =
> gsiftp://trestles-dm1.sdsc.edu:2811//home/ogce/scratch/Echo_Fri_Nov_01_14_54_4
> 6_EDT_2013_ebabb487-cba4-45f9-b37b-cdde9b0f43fa/inputData
> <http://trestles-dm1.sdsc.edu:2811//home/ogce/scratch/Echo_Fri_Nov_01_14_54_46
> _EDT_2013_ebabb487-cba4-45f9-b37b-cdde9b0f43fa/inputData>
> [INFO] Output directory =
> gsiftp://trestles-dm1.sdsc.edu:2811//home/ogce/scratch/Echo_Fri_Nov_01_14_54_4
> 6_EDT_2013_ebabb487-cba4-45f9-b37b-cdde9b0f43fa/outputData
> <http://trestles-dm1.sdsc.edu:2811//home/ogce/scratch/Echo_Fri_Nov_01_14_54_46
> _EDT_2013_ebabb487-cba4-45f9-b37b-cdde9b0f43fa/outputData>
> [INFO] Creating Directory = trestles-dm1.sdsc.edu:2811=//home/ogce/scratch
> [INFO] Creating Directory =
> trestles-dm1.sdsc.edu:2811=//home/ogce/scratch/Echo_Fri_Nov_01_14_54_46_EDT_20
> 13_ebabb487-cba4-45f9-b37b-cdde9b0f43fa
> [INFO] Creating Directory =
> trestles-dm1.sdsc.edu:2811=//home/ogce/scratch/Echo_Fri_Nov_01_14_54_46_EDT_20
> 13_ebabb487-cba4-45f9-b37b-cdde9b0f43fa/inputData
> [INFO] Creating Directory =
> trestles-dm1.sdsc.edu:2811=//home/ogce/scratch/Echo_Fri_Nov_01_14_54_46_EDT_20
> 13_ebabb487-cba4-45f9-b37b-cdde9b0f43fa/outputData
> [INFO] Invoking GridFTPInputHandler ...
> [INFO] Two phase commit is set to true
> [INFO] Execution has started ...
> [INFO] GFac event of type StartExecutionEvent received.
> [INFO] Request to contact:trestles-login2.sdsc.edu:2119/jobmanager-pbstest2
> <http://trestles-login2.sdsc.edu:2119/jobmanager-pbstest2>
> [INFO] Finished launching job, Host = trestles.sdsc.edu
> <http://trestles.sdsc.edu>  RSL = &( queue = "shared" )( stdout =
> "/home/ogce/scratch/Echo_Fri_Nov_01_14_54_46_EDT_2013_ebabb487-cba4-45f9-b37b-
> cdde9b0f43fa/EchoApplication.stdout" )( count = "1" )( executable =
> "/bin/echo" )( stderr =
> "/home/ogce/scratch/Echo_Fri_Nov_01_14_54_46_EDT_2013_ebabb487-cba4-45f9-b37b-
> cdde9b0f43fa/EchoApplication.stderr" )( maxwalltime = "30" )( hostCount = "1"
> )( project = "sds128" )( environment = ( "inputData"
> "/home/ogce/scratch/Echo_Fri_Nov_01_14_54_46_EDT_2013_ebabb487-cba4-45f9-b37b-
> cdde9b0f43fa/inputData" ) ( "outputData"
> "/home/ogce/scratch/Echo_Fri_Nov_01_14_54_46_EDT_2013_ebabb487-cba4-45f9-b37b-
> cdde9b0f43fa/outputData" ) )( arguments = "echo_output=Hello World" )(
> proxy_timeout = "1" )( jobtype = "single" )( directory =
> "/home/ogce/scratch/Echo_Fri_Nov_01_14_54_46_EDT_2013_ebabb487-cba4-45f9-b37b-
> cdde9b0f43fa" )(twoPhase=yes) working directory =
> /home/ogce/scratch/Echo_Fri_Nov_01_14_54_46_EDT_2013_ebabb487-cba4-45f9-b37b-c
> dde9b0f43fa temp directory = /home/ogce/scratch Globus GateKeeper Endpoint =
> trestles-login2.sdsc.edu:2119/jobmanager-pbstest2
> <http://trestles-login2.sdsc.edu:2119/jobmanager-pbstest2>
> org.globus.gram.internal.gramerrors.properties not found
> [INFO] Un-submitted JobID=
> https://trestles-login2.sdsc.edu:50383/16361902090717749526/941255132809112770
> 6/
> [INFO] GFac event of type JobIDEvent received.
> [INFO] JobID = 
> https://trestles-login2.sdsc.edu:50383/16361902090717749526/941255132809112770
> 6/
> [INFO] Two phase commit: sending COMMIT_REQUEST signal; Job id -
> https://trestles-login2.sdsc.edu:50383/16361902090717749526/941255132809112770
> 6/
> [INFO] Submitted JobID=
> https://trestles-login2.sdsc.edu:50383/16361902090717749526/941255132809112770
> 6/
> [INFO] GFac event of type JobIDEvent received.
> 
> On Fri, Nov 1, 2013 at 2:38 PM, Marlon Pierce <marpierc@iu.edu> wrote:
>> Is RC1 good enough to start a [VOTE] thread?
>> 
>> 
>> Marlon
>> 
>> On 11/1/13 2:36 PM, Saminda Wijeratne wrote:
>>> > Following tests were done.
>>> >
>>> >
>>> > Used tar.gz distributions and tested both on standalone Airavata server
>>> > distribution and tomcat deployed Airavata services in Linux OS,
>>> >
>>> >    - 5 and 10 minute tutorials (need to update [1] with the new registry
>>> >    service url & fix spelling mistake "defualt")
>>> >    - Airavata Client samples
>>> >    - Airavata Client library test
>>> >
>>> >
>>> >    - Source distribution built successfully (unit testing + integration
>>> >    tests with clean maven repo)
>>> >    - Source tag built successfully (unit testing + integration tests with
>>> >    clean maven repo)
>>> >
>>> >
>>> >    - Signatures verified
>>> >    - LICENCE & NOTICE files present in all the distributions
>>> >
>>> >
>>> > 1. http://airavata.apache.org/documentation/quickstart-tutorials.html
>>> > On Thu, Oct 31, 2013 at 2:27 PM, Chathuri Wimalasena
>>> > <kamalasini@gmail.com>wrote:
>>> >
>>>> >> Hi Devs,
>>>> >>
>>>> >> I did the following tests.
>>>> >>
>>>> >>    - 5 mins and 10 mins tutorials
>>>> >>    - Basic functionality using xbaya
>>>> >>    - Build source packs
>>>> >>    - Ran job in BR2 using xbaya
>>>> >>
>>>> >> I encountered [1] and I think we should document how to use new
features
>>>> >> (GSI-SSH) in our wiki. There are configuration changes that user
need to
do
>>>> >> in order to submit jobs in GSI-SSH supporting resources. Also when
>>>> running
>>>> >> a job, if it is in the queue, I'm getting the following log messages
in
>>>> >> airavata server console.
>>>> >>
>>>> >> [INFO] GFac event of type StatusChangeEvent received.
>>>> >> [INFO] Job status has changed ...
>>>> >> [INFO] Job status has changed to : Q
>>>> >> [ERROR] Standard Error output :
>>>> >> [INFO] GFac event of type StatusChangeEvent received.
>>>> >> [INFO] Job status has changed ...
>>>> >> [INFO] Job status has changed to : Q
>>>> >> [ERROR] Standard Error output :
>>>> >> [INFO] GFac event of type StatusChangeEvent received.
>>>> >> [INFO] Job status has changed ...
>>>> >> [INFO] Job status has changed to : Q
>>>> >>
>>>> >> I'm wondering why there is a message with ERROR.
>>>> >>
>>>> >> Regards,
>>>> >> Chathuri
>>>> >>
>>>> >> [1] https://issues.apache.org/jira/browse/AIRAVATA-950
>>>> >>
>>>> >>
>>>> >>
>>>> >> On Wed, Oct 30, 2013 at 3:01 PM, Raminder Singh
>>>> <raminderjsingh@gmail.com>wrote:
>>>> >>
>>>>> >>> Discussion thread for vote on Apache Airavata 0.10 release
candidate.
>>>>> >>>
>>>>> >>> If you have any questions or feedback or to post results
of validating
>>>>> the release, please reply to this thread. Once you verify the release,
>>>>> please post your vote to the VOTE thread.
>>>>> >>>
>>>>> >>> For reference, the Apache release guide  -
>>>>> http://www.apache.org/dev/release.html
>>>>> >>>
>>>>> >>> Some tips to validate the release before you vote:
>>>>> >>>
>>>>> >>> * Download the binary version and run the 5 minute or 10
minute
>>>>> tutorial as described in README and website.
>>>>> >>> * Download the source files from compressed files and release
tag and
>>>>> build (which includes tests).
>>>>> >>> * Verify the distribution for the required LICENSE and NOTICE
files
>>>>> >>> * Verify if all the staged files are signed and the signature
is
>>>>> verifiable.
>>>>> >>> * Verify if the signing key in the project's KEYS file is
hosted on a
>>>>> public server
>>>>> >>>
>>>>> >>> Thanks for your time in validating the release and voting,
>>>>> >>> Raminder Singh
>>>>> >>> (On Behalf of Airavata PMC)
>>>>> >>>
>>>>> >>>
>>>>> >>>
>> 
> 



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