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From Amila Jayasekara <thejaka.am...@gmail.com>
Subject Re: [DISCUSS] Apache Airavata Release 0.8 - RC3
Date Thu, 04 Jul 2013 14:31:42 GMT
On Wed, Jul 3, 2013 at 1:18 PM, Viknes Balasubramanee <viknesb@msn.com>wrote:

> Sure, here is the JIRA issue
> https://issues.apache.org/jira/browse/AIRAVATA-879


What is the final verdict on above issue ?
Are we going to treat
AIRAVATA-879<https://issues.apache.org/jira/browse/AIRAVATA-879> as
a blocker for the release ?

Further is there a Windows environment which we can use to test this issue ?

Thanks
Amila


>
>
> Thanks
> Viknes
>
> -----Original Message-----
> From: Suresh Marru [mailto:smarru@apache.org]
> Sent: Wednesday, July 03, 2013 12:44 PM
> To: dev@airavata.apache.org
> Subject: Re: [DISCUSS] Apache Airavata Release 0.8 - RC3
>
> On Jul 3, 2013, at 12:37 PM, Marlon Pierce <marpierc@iu.edu> wrote:
>
> > -----BEGIN PGP SIGNED MESSAGE-----
> > Hash: SHA1
> >
> > My concern about making this a known issue is that many who will try
> > out the release for the first time will hit this bug.
> >
>
> Thats true and may not be a good thing. Any volunteers to get to the bottom
> of this race condition and fix it in the trunk? If we first make sure we
> really fixed it, certainly worth a new RC.
>
> Viknes, can you please crate a JIRA and fill in the steps to reproduce it?
>
> Suresh
>
> >
> >
> > Marlon
> >
> >
> > On 7/3/13 12:33 PM, Suresh Marru wrote:
> >> Hi Viknes,
> >>
> >> It seems the issues of "database not getting created the first time"
> >> is reproducible on Linux and Windows as well,  for some reason Mac's
> >> are ok. Will wait for others to chime in. We can either proceed with
> >> the release by adding this as a Known issue, or if any one raises a
> >> blocker, we can address and re-spin the release.
> >>
> >> Suresh
> >>
> >> On Jul 3, 2013, at 12:27 PM, Viknes Balasubramanee <viknesb@msn.com>
> >> wrote:
> >>
> >>> Since no one else is getting this error, it might be a Windows
> >>> specific or system specific issue. I will give my vote.
> >>>
> >>> Thanks Viknes
> >>>
> >>> -----Original Message----- From: Suresh Marru
> >>> [mailto:smarru@apache.org] Sent: Monday, July 01, 2013 4:10 PM
> >>> To: dev@airavata.apache.org Subject: Re: [DISCUSS] Apache Airavata
> >>> Release 0.8 - RC3
> >>>
> >>> I did not do extensive testing yet, but a quick try on a mac and did
> >>> not give this error either.
> >>>
> >>> Suresh
> >>>
> >>> On Jul 1, 2013, at 4:06 PM, Amila Jayasekara
> >>> <thejaka.amila@gmail.com> wrote:
> >>>
> >>>> Strange, I am not experiencing this issue. Wonder whether this is a
> >>>> Windows specific issue. Any one else experiencing this issue ?
> >>>>
> >>>> Thanks Amila
> >>>>
> >>>>
> >>>> On Mon, Jul 1, 2013 at 3:50 PM, Viknes Balasubramanee
> >>> <viknesb@msn.com>wrote:
> >>>>
> >>>>> Hi all,
> >>>>>
> >>>>> I downloaded the server bin distribution, tried to start the
> >>>>> server and I got the below exception. It seems this error occurs
> >>>>> only the first time I start the server. It does not occur the
> >>>>> subsequent times during the startup.
> >>>>>
> >>>>> Mon Jul 01 15:13:32 EDT 2013 : Apache Derby Network Server -
> >>>>> 10.9.1.0 - (1344872) started and ready to accept connection s on
> >>>>> port 1527
> >>>>>
> >>>>> DriverClassName=org.apache.derby.jdbc.ClientDriver,Url=jdbc:derby:
> >>>>> //l
> >>>>>
> >>>>>
> > ocalhos t:1527/persistent_data;create=true;user=aira
> >>>>>
> >>>>> vata;password=airavata,Username=airavata,Password=airavata,validat
> >>>>> ion
> >>>>>
> >>>>>
> > Query=S ELECT 1 from Configuration,MaxActive=10,MaxI
> >>>>> dle=5,MinIdle=2,MaxWait=60000,testWhileIdle=true,testOnBorrow=true
> >>>>>
> >>>>>
> > 52  airavata_data  INFO   [Thread-8] openjpa.Runtime - Starting OpenJPA
> >>>>> 2.2.0 [ERROR] Error while initializing the Airavata API
> >>>>>
> org.apache.airavata.client.api.exception.AiravataAPIInvocationException:
> >>>>>
> >>>>>
> > Error while initializing the Airavata API
> >>>>> at
> >>>>>
> >>>>> org.apache.airavata.client.AiravataAPIFactory.getAPI(AiravataAPIFa
> >>>>> cto
> >>>>>
> >>>>>
> > ry.java
> >>>>> :64) at
> >>>>>
> >>>>> org.apache.airavata.client.AiravataAPIFactory.getAPI(AiravataAPIFa
> >>>>> cto
> >>>>>
> >>>>>
> > ry.java
> >>>>> :43) at
> >>>>>
> >>>>> org.apache.airavata.client.AiravataAPIFactory.getAPI(AiravataAPIFa
> >>>>> cto
> >>>>>
> >>>>>
> > ry.java
> >>>>> :39) at
> >>>>>
> >>>>> org.apache.airavata.wsmg.msgbox.MsgBoxServiceLifeCycle$1.run(MsgBo
> >>>>> xSe
> >>>>>
> >>>>>
> > rviceLi
> >>>>> feCycle.java:117) Caused by:
> >>>>>
> org.apache.airavata.client.api.exception.AiravataAPIInvocationException:
> >>>>>
> >>>>>
> > Error while initializing the Airavat
> >>>>> a API at
> >>>>>
> >>>>> org.apache.airavata.client.AiravataClient.initialize(AiravataClien
> >>>>> t.j
> >>>>>
> >>>>>
> > ava:163
> >>>>> ) at
> >>>>>
> >>>>> org.apache.airavata.client.AiravataAPIFactory.getAPI(AiravataAPIFa
> >>>>> cto
> >>>>>
> >>>>>
> > ry.java
> >>>>> :61) ... 3 more Caused by: <openjpa-2.2.0-r422266:1244990 fatal
> >>>>> general error>
> >>>>> org.apache.openjpa.persistence.PersistenceException: Cann ot
> >>>>> create PoolableConnectionFactory (Schema 'AIRAVATA' does not
> >>>>> exist) at
> >>>>>
> >>>>> org.apache.openjpa.jdbc.sql.DBDictionaryFactory.newDBDictionary(DB
> >>>>> Dic
> >>>>>
> >>>>>
> > tionary
> >>>>> Factory.java:102) at
> >>>>>
> >>>>> org.apache.openjpa.jdbc.conf.JDBCConfigurationImpl.getDBDictionary
> >>>>> Ins
> >>>>>
> >>>>>
> > tance(J
> >>>>> DBCConfigurationImpl.java:603) at
> >>>>>
> >>>>> org.apache.openjpa.jdbc.meta.MappingRepository.endConfiguration(Ma
> >>>>> ppi
> >>>>>
> >>>>>
> > ngRepos
> >>>>> itory.java:1510) at
> >>>>>
> >>>>>
> >>>
>
> org.apache.openjpa.lib.conf.Configurations.configureInstance(Configurations.
> >>>>>
> >>>
> > java:518)
> >>>>> at
> >>>>>
> >>>>>
> >>>
>
> org.apache.openjpa.lib.conf.Configurations.configureInstance(Configurations.
> >>>>>
> >>>
> > java:443)
> >>>>> at
> >>>>> org.apache.openjpa.lib.conf.PluginValue.instantiate(PluginValue.ja
> >>>>> va:104)
> >>>>>
> >>>>>
> > at
> >>>>>
> >>>>> org.apache.openjpa.conf.MetaDataRepositoryValue.instantiate(MetaDa
> >>>>> taR
> >>>>>
> >>>>>
> > eposito
> >>>>> ryValue.java:68) at
> >>>>> org.apache.openjpa.lib.conf.ObjectValue.instantiate(ObjectValue.ja
> >>>>> va:83)
> >>>>>
> >>>>>
> > at
> >>>>>
> >>>>> org.apache.openjpa.conf.OpenJPAConfigurationImpl.newMetaDataReposi
> >>>>> tor
> >>>>>
> >>>>>
> > yInstan
> >>>>> ce(OpenJPAConfigurationImpl.java: 968) at
> >>>>>
> >>>>> org.apache.openjpa.conf.OpenJPAConfigurationImpl.getMetaDataReposi
> >>>>> tor
> >>>>>
> >>>>>
> > yInstan
> >>>>> ce(OpenJPAConfigurationImpl.java: 959) at
> >>>>>
> >>>>> org.apache.openjpa.kernel.AbstractBrokerFactory.makeReadOnly(Abstr
> >>>>> act
> >>>>>
> >>>>>
> > BrokerF
> >>>>> actory.java:638) at
> >>>>>
> >>>>> org.apache.openjpa.kernel.AbstractBrokerFactory.newBroker(Abstract
> >>>>> Bro
> >>>>>
> >>>>>
> > kerFact
> >>>>> ory.java:203) at
> >>>>>
> >>>>> org.apache.openjpa.kernel.DelegatingBrokerFactory.newBroker(Delega
> >>>>> tin
> >>>>>
> >>>>>
> > gBroker
> >>>>> Factory.java:156) at
> >>>>>
> >>>>> org.apache.openjpa.persistence.EntityManagerFactoryImpl.createEnti
> >>>>> tyM
> >>>>>
> >>>>>
> > anager(
> >>>>> EntityManagerFactoryImpl.java:227 ) at
> >>>>>
> >>>>> org.apache.openjpa.persistence.EntityManagerFactoryImpl.createEnti
> >>>>> tyM
> >>>>>
> >>>>>
> > anager(
> >>>>> EntityManagerFactoryImpl.java:154 ) at
> >>>>>
> >>>>> org.apache.openjpa.persistence.EntityManagerFactoryImpl.createEnti
> >>>>> tyM
> >>>>>
> >>>>>
> > anager(
> >>>>> EntityManagerFactoryImpl.java:60)
> >>>>>
> >>>>> at
> >>>>>
> >>>>> org.apache.airavata.persistance.registry.jpa.ResourceUtils.getEnti
> >>>>> tyM
> >>>>>
> >>>>>
> > anager(
> >>>>> ResourceUtils.java:68) at
> >>>>>
> >>>>> org.apache.airavata.persistance.registry.jpa.ResourceUtils.getConf
> >>>>> igu
> >>>>>
> >>>>>
> > rations
> >>>>> (ResourceUtils.java:201) at
> >>>>>
> >>>>> org.apache.airavata.persistance.registry.jpa.ResourceUtils.getConf
> >>>>> igu
> >>>>>
> >>>>>
> > ration(
> >>>>> ResourceUtils.java:223) at
> >>>>>
> >>>>> org.apache.airavata.persistance.registry.jpa.impl.AiravataJPARegis
> >>>>> try
> >>>>>
> >>>>>
> > .getCon
> >>>>> figuration(AiravataJPARegistry.ja va:226) at
> >>>>>
> >>>>> org.apache.airavata.persistance.registry.jpa.impl.AiravataJPARegis
> >>>>> try
> >>>>>
> >>>>>
> > .initia
> >>>>> lize(AiravataJPARegistry.java:159 ) at
> >>>>>
> >>>>> org.apache.airavata.registry.api.AiravataRegistryFactory.getRegist
> >>>>> ry(
> >>>>>
> >>>>>
> > Airavat
> >>>>> aRegistryFactory.java:81) at
> >>>>>
> >>>>> org.apache.airavata.client.AiravataClient.getRegistry(AiravataClient.
> >>>>>
> >>>>>
> > java:21
> >>>>> 6) at
> >>>>>
> >>>>> org.apache.airavata.client.AiravataClient.createConfig(AiravataCli
> >>>>> ent
> >>>>>
> >>>>>
> > .java:1
> >>>>> 12) at
> >>>>>
> >>>>> org.apache.airavata.client.AiravataClient.initialize(AiravataClien
> >>>>> t.j
> >>>>>
> >>>>>
> > ava:144
> >>>>> ) ... 4 more Caused by:
> >>>>> org.apache.commons.dbcp.SQLNestedException: Cannot create
> >>>>> PoolableConnectionFactory (Schema 'AIRAVATA' does n ot
> >>>>> exist) at
> >>>>>
> >>>>> org.apache.commons.dbcp.BasicDataSource.createPoolableConnectionFa
> >>>>> cto
> >>>>>
> >>>>>
> > ry(Basi
> >>>>> cDataSource.java:1549) at
> >>>>>
> >>>>> org.apache.commons.dbcp.BasicDataSource.createDataSource(BasicData
> >>>>> Sou
> >>>>>
> >>>>>
> > rce.jav
> >>>>> a:1388) at
> >>>>>
> >>>>> org.apache.commons.dbcp.BasicDataSource.getConnection(BasicDataSou
> >>>>> rce
> >>>>>
> >>>>>
> > .java:1
> >>>>> 044) at
> >>>>>
> >>>>> org.apache.openjpa.lib.jdbc.DelegatingDataSource.getConnection(Del
> >>>>> ega
> >>>>>
> >>>>>
> > tingDat
> >>>>> aSource.java:110) at
> >>>>>
> >>>>> org.apache.openjpa.lib.jdbc.DecoratingDataSource.getConnection(Dec
> >>>>> ora
> >>>>>
> >>>>>
> > tingDat
> >>>>> aSource.java:87) at
> >>>>>
> >>>>> org.apache.openjpa.jdbc.sql.DBDictionaryFactory.newDBDictionary(DB
> >>>>> Dic
> >>>>>
> >>>>>
> > tionary
> >>>>> Factory.java:91) ... 28 more Caused by:
> >>>>> java.sql.SQLSyntaxErrorException: Schema 'AIRAVATA' does not exist
> >>>>> at
> >>>>> org.apache.derby.client.am.SQLExceptionFactory40.getSQLException(U
> >>>>> nkn
> >>>>>
> >>>>>
> > own
> >>>>> Source) at
> >>>>> org.apache.derby.client.am.SqlException.getSQLException(Unknown
> >>>>>
> >>>>>
> > Source)
> >>>>> at org.apache.derby.client.am.Statement.executeQuery(Unknown
> >>>>> Source) at
> >>>>>
> >>>>> org.apache.commons.dbcp.DelegatingStatement.executeQuery(Delegatin
> >>>>> gSt
> >>>>>
> >>>>>
> > atement
> >>>>> .java:208) at
> >>>>>
> >>>>> org.apache.commons.dbcp.PoolableConnectionFactory.validateConnecti
> >>>>> on(
> >>>>>
> >>>>>
> > Poolabl
> >>>>> eConnectionFactory.java:658) at
> >>>>>
> >>>>> org.apache.commons.dbcp.BasicDataSource.validateConnectionFactory(
> >>>>> Bas
> >>>>>
> >>>>>
> > icDataS
> >>>>> ource.java:1558) at
> >>>>>
> >>>>> org.apache.commons.dbcp.BasicDataSource.createPoolableConnectionFa
> >>>>> cto
> >>>>>
> >>>>>
> > ry(Basi
> >>>>> cDataSource.java:1545) ... 33 more Caused by:
> >>>>> org.apache.derby.client.am.SqlException: Schema 'AIRAVATA'
> >>>>> does not exist at
> >>>>> org.apache.derby.client.am.Statement.completeSqlca(Unknown
> >>>>> Source) at
> >>>>> org.apache.derby.client.net.NetStatementReply.parsePrepareError(Un
> >>>>> kno
> >>>>>
> >>>>>
> > wn
> >>>>> Source) at
> >>>>> org.apache.derby.client.net.NetStatementReply.parsePRPSQLSTTreply(
> >>>>> Unk
> >>>>>
> >>>>>
> > nown
> >>>>> Source) at
> >>>>>
> >>>>> org.apache.derby.client.net.NetStatementReply.readPrepareDescribeO
> >>>>> utp
> >>>>>
> >>>>>
> > ut(Unkn
> >>>>> own Source) at
> >>>>>
> >>>>> org.apache.derby.client.net.StatementReply.readPrepareDescribeOutp
> >>>>> ut(
> >>>>>
> >>>>>
> > Unknown
> >>>>> Source) at
> >>>>> org.apache.derby.client.net.NetStatement.readPrepareDescribeOutput
> >>>>> _(U
> >>>>>
> >>>>>
> > nknown
> >>>>> Source) at
> >>>>> org.apache.derby.client.am.Statement.readPrepareDescribeOutput(Unk
> >>>>> now
> >>>>>
> >>>>>
> > n
> >>>>> Source) at
> >>>>> org.apache.derby.client.am.Statement.flowExecute(Unknown
> >>> Source)
> >>>>> at
> >>>>> org.apache.derby.client.am.Statement.executeQueryX(Unknown
> >>>>> Source) ... 38 more [ERROR] Error while initializing the Airavata
> >>>>> API
> >>>>>
> org.apache.airavata.client.api.exception.AiravataAPIInvocationException:
> >>>>>
> >>>>>
> > Error while initializing the Airavata API
> >>>>> at
> >>>>>
> >>>>> org.apache.airavata.client.AiravataAPIFactory.getAPI(AiravataAPIFa
> >>>>> cto
> >>>>>
> >>>>>
> > ry.java
> >>>>> :64) at
> >>>>>
> >>>>> org.apache.airavata.client.AiravataAPIFactory.getAPI(AiravataAPIFa
> >>>>> cto
> >>>>>
> >>>>>
> > ry.java
> >>>>> :43) at
> >>>>>
> >>>>> org.apache.airavata.client.AiravataAPIFactory.getAPI(AiravataAPIFa
> >>>>> cto
> >>>>>
> >>>>>
> > ry.java
> >>>>> :39) at
> >>>>>
> >>>>> org.apache.airavata.wsmg.broker.BrokerServiceLifeCycle$1.run(Broke
> >>>>> rSe
> >>>>>
> >>>>>
> > rviceLi
> >>>>> feCycle.java:156) Caused by:
> >>>>>
> org.apache.airavata.client.api.exception.AiravataAPIInvocationException:
> >>>>>
> >>>>>
> > Error while initializing the Airavat
> >>>>> a API at
> >>>>>
> >>>>> org.apache.airavata.client.AiravataClient.initialize(AiravataClien
> >>>>> t.j
> >>>>>
> >>>>>
> > ava:163
> >>>>> ) at
> >>>>>
> >>>>> org.apache.airavata.client.AiravataAPIFactory.getAPI(AiravataAPIFa
> >>>>> cto
> >>>>>
> >>>>>
> > ry.java
> >>>>> :61) ... 3 more Caused by: <openjpa-2.2.0-r422266:1244990 fatal
> >>>>> general error>
> >>>>> org.apache.openjpa.persistence.PersistenceException: Cann ot
> >>>>> create PoolableConnectionFactory (Schema 'AIRAVATA' does not
> >>>>> exist) at
> >>>>>
> >>>>> org.apache.openjpa.jdbc.sql.DBDictionaryFactory.newDBDictionary(DB
> >>>>> Dic
> >>>>>
> >>>>>
> > tionary
> >>>>> Factory.java:102) at
> >>>>>
> >>>>> org.apache.openjpa.jdbc.conf.JDBCConfigurationImpl.getDBDictionary
> >>>>> Ins
> >>>>>
> >>>>>
> > tance(J
> >>>>> DBCConfigurationImpl.java:603) at
> >>>>>
> >>>>> org.apache.openjpa.jdbc.meta.MappingRepository.endConfiguration(Ma
> >>>>> ppi
> >>>>>
> >>>>>
> > ngRepos
> >>>>> itory.java:1510) at
> >>>>>
> >>>>>
> >>>
>
> org.apache.openjpa.lib.conf.Configurations.configureInstance(Configurations.
> >>>>>
> >>>
> > java:518)
> >>>>> at
> >>>>>
> >>>>>
> >>>
>
> org.apache.openjpa.lib.conf.Configurations.configureInstance(Configurations.
> >>>>>
> >>>
> > java:443)
> >>>>> at
> >>>>> org.apache.openjpa.lib.conf.PluginValue.instantiate(PluginValue.ja
> >>>>> va:104)
> >>>>>
> >>>>>
> > at
> >>>>>
> >>>>> org.apache.openjpa.conf.MetaDataRepositoryValue.instantiate(MetaDa
> >>>>> taR
> >>>>>
> >>>>>
> > eposito
> >>>>> ryValue.java:68) at
> >>>>> org.apache.openjpa.lib.conf.ObjectValue.instantiate(ObjectValue.ja
> >>>>> va:83)
> >>>>>
> >>>>>
> > at
> >>>>>
> >>>>> org.apache.openjpa.conf.OpenJPAConfigurationImpl.newMetaDataReposi
> >>>>> tor
> >>>>>
> >>>>>
> > yInstan
> >>>>> ce(OpenJPAConfigurationImpl.java: 968) at
> >>>>>
> >>>>> org.apache.openjpa.conf.OpenJPAConfigurationImpl.getMetaDataReposi
> >>>>> tor
> >>>>>
> >>>>>
> > yInstan
> >>>>> ce(OpenJPAConfigurationImpl.java: 959) at
> >>>>>
> >>>>> org.apache.openjpa.jdbc.conf.JDBCConfigurationImpl.getMappingRepos
> >>>>> ito
> >>>>>
> >>>>>
> > ryInsta
> >>>>> nce(JDBCConfigurationImpl.java:71 1) at
> >>>>>
> >>>>> org.apache.openjpa.jdbc.kernel.JDBCBrokerFactory.synchronizeMappin
> >>>>> gs(
> >>>>>
> >>>>>
> > JDBCBro
> >>>>> kerFactory.java:140) at
> >>>>>
> >>>>> org.apache.openjpa.jdbc.kernel.JDBCBrokerFactory.synchronizeMappin
> >>>>> gs(
> >>>>>
> >>>>>
> > JDBCBro
> >>>>> kerFactory.java:164) at
> >>>>>
> >>>>> org.apache.openjpa.jdbc.kernel.JDBCBrokerFactory.newBrokerImpl(JDB
> >>>>> CBr
> >>>>>
> >>>>>
> > okerFac
> >>>>> tory.java:122) at
> >>>>>
> >>>>> org.apache.openjpa.kernel.AbstractBrokerFactory.newBroker(Abstract
> >>>>> Bro
> >>>>>
> >>>>>
> > kerFact
> >>>>> ory.java:209) at
> >>>>>
> >>>>> org.apache.openjpa.kernel.DelegatingBrokerFactory.newBroker(Delega
> >>>>> tin
> >>>>>
> >>>>>
> > gBroker
> >>>>> Factory.java:156) at
> >>>>>
> >>>>> org.apache.openjpa.persistence.EntityManagerFactoryImpl.createEnti
> >>>>> tyM
> >>>>>
> >>>>>
> > anager(
> >>>>> EntityManagerFactoryImpl.java:227 ) at
> >>>>>
> >>>>> org.apache.openjpa.persistence.EntityManagerFactoryImpl.createEnti
> >>>>> tyM
> >>>>>
> >>>>>
> > anager(
> >>>>> EntityManagerFactoryImpl.java:154 ) at
> >>>>>
> >>>>> org.apache.openjpa.persistence.EntityManagerFactoryImpl.createEnti
> >>>>> tyM
> >>>>>
> >>>>>
> > anager(
> >>>>> EntityManagerFactoryImpl.java:60)
> >>>>>
> >>>>> at
> >>>>>
> >>>>> org.apache.airavata.persistance.registry.jpa.ResourceUtils.getEnti
> >>>>> tyM
> >>>>>
> >>>>>
> > anager(
> >>>>> ResourceUtils.java:68) at
> >>>>>
> >>>>> org.apache.airavata.persistance.registry.jpa.ResourceUtils.getConf
> >>>>> igu
> >>>>>
> >>>>>
> > rations
> >>>>> (ResourceUtils.java:201) at
> >>>>>
> >>>>> org.apache.airavata.persistance.registry.jpa.ResourceUtils.getConf
> >>>>> igu
> >>>>>
> >>>>>
> > ration(
> >>>>> ResourceUtils.java:223) at
> >>>>>
> >>>>> org.apache.airavata.persistance.registry.jpa.impl.AiravataJPARegis
> >>>>> try
> >>>>>
> >>>>>
> > .getCon
> >>>>> figuration(AiravataJPARegistry.ja va:226) at
> >>>>>
> >>>>> org.apache.airavata.persistance.registry.jpa.impl.AiravataJPARegis
> >>>>> try
> >>>>>
> >>>>>
> > .initia
> >>>>> lize(AiravataJPARegistry.java:159 ) at
> >>>>>
> >>>>> org.apache.airavata.registry.api.AiravataRegistryFactory.getRegist
> >>>>> ry(
> >>>>>
> >>>>>
> > Airavat
> >>>>> aRegistryFactory.java:81) at
> >>>>>
> >>>>> org.apache.airavata.client.AiravataClient.getRegistry(AiravataClient.
> >>>>>
> >>>>>
> > java:21
> >>>>> 6) at
> >>>>>
> >>>>> org.apache.airavata.client.AiravataClient.createConfig(AiravataCli
> >>>>> ent
> >>>>>
> >>>>>
> > .java:1
> >>>>> 12) at
> >>>>>
> >>>>> org.apache.airavata.client.AiravataClient.initialize(AiravataClien
> >>>>> t.j
> >>>>>
> >>>>>
> > ava:144
> >>>>> ) ... 4 more Caused by:
> >>>>> org.apache.commons.dbcp.SQLNestedException: Cannot create
> >>>>> PoolableConnectionFactory (Schema 'AIRAVATA' does n ot
> >>>>> exist) at
> >>>>>
> >>>>> org.apache.commons.dbcp.BasicDataSource.createPoolableConnectionFa
> >>>>> cto
> >>>>>
> >>>>>
> > ry(Basi
> >>>>> cDataSource.java:1549) at
> >>>>>
> >>>>> org.apache.commons.dbcp.BasicDataSource.createDataSource(BasicData
> >>>>> Sou
> >>>>>
> >>>>>
> > rce.jav
> >>>>> a:1388) at
> >>>>>
> >>>>> org.apache.commons.dbcp.BasicDataSource.getConnection(BasicDataSou
> >>>>> rce
> >>>>>
> >>>>>
> > .java:1
> >>>>> 044) at
> >>>>>
> >>>>> org.apache.openjpa.lib.jdbc.DelegatingDataSource.getConnection(Del
> >>>>> ega
> >>>>>
> >>>>>
> > tingDat
> >>>>> aSource.java:110) at
> >>>>>
> >>>>> org.apache.openjpa.lib.jdbc.DecoratingDataSource.getConnection(Dec
> >>>>> ora
> >>>>>
> >>>>>
> > tingDat
> >>>>> aSource.java:87) at
> >>>>>
> >>>>> org.apache.openjpa.jdbc.sql.DBDictionaryFactory.newDBDictionary(DB
> >>>>> Dic
> >>>>>
> >>>>>
> > tionary
> >>>>> Factory.java:91) ... 31 more Caused by:
> >>>>> java.sql.SQLSyntaxErrorException: Schema 'AIRAVATA' does not exist
> >>>>> at
> >>>>> org.apache.derby.client.am.SQLExceptionFactory40.getSQLException(U
> >>>>> nkn
> >>>>>
> >>>>>
> > own
> >>>>> Source) at
> >>>>> org.apache.derby.client.am.SqlException.getSQLException(Unknown
> >>>>>
> >>>>>
> > Source)
> >>>>> at org.apache.derby.client.am.Statement.executeQuery(Unknown
> >>>>> Source) at
> >>>>>
> >>>>> org.apache.commons.dbcp.DelegatingStatement.executeQuery(Delegatin
> >>>>> gSt
> >>>>>
> >>>>>
> > atement
> >>>>> .java:208) at
> >>>>>
> >>>>> org.apache.commons.dbcp.PoolableConnectionFactory.validateConnecti
> >>>>> on(
> >>>>>
> >>>>>
> > Poolabl
> >>>>> eConnectionFactory.java:658) at
> >>>>>
> >>>>> org.apache.commons.dbcp.BasicDataSource.validateConnectionFactory(
> >>>>> Bas
> >>>>>
> >>>>>
> > icDataS
> >>>>> ource.java:1558) at
> >>>>>
> >>>>> org.apache.commons.dbcp.BasicDataSource.createPoolableConnectionFa
> >>>>> cto
> >>>>>
> >>>>>
> > ry(Basi
> >>>>> cDataSource.java:1545) ... 36 more Caused by:
> >>>>> org.apache.derby.client.am.SqlException: Schema 'AIRAVATA'
> >>>>> does not exist at
> >>>>> org.apache.derby.client.am.Statement.completeSqlca(Unknown
> >>>>> Source) at
> >>>>> org.apache.derby.client.net.NetStatementReply.parsePrepareError(Un
> >>>>> kno
> >>>>>
> >>>>>
> > wn
> >>>>> Source) at
> >>>>> org.apache.derby.client.net.NetStatementReply.parsePRPSQLSTTreply(
> >>>>> Unk
> >>>>>
> >>>>>
> > nown
> >>>>> Source) at
> >>>>>
> >>>>> org.apache.derby.client.net.NetStatementReply.readPrepareDescribeO
> >>>>> utp
> >>>>>
> >>>>>
> > ut(Unkn
> >>>>> own Source) at
> >>>>>
> >>>>> org.apache.derby.client.net.StatementReply.readPrepareDescribeOutp
> >>>>> ut(
> >>>>>
> >>>>>
> > Unknown
> >>>>> Source) at
> >>>>> org.apache.derby.client.net.NetStatement.readPrepareDescribeOutput
> >>>>> _(U
> >>>>>
> >>>>>
> > nknown
> >>>>> Source) at
> >>>>> org.apache.derby.client.am.Statement.readPrepareDescribeOutput(Unk
> >>>>> now
> >>>>>
> >>>>>
> > n
> >>>>> Source) at
> >>>>> org.apache.derby.client.am.Statement.flowExecute(Unknown
> >>> Source)
> >>>>> at
> >>>>> org.apache.derby.client.am.Statement.executeQueryX(Unknown
> >>>>> Source) ... 41 more [INFO] New Database created for Registry
> >>>>> 59649  airavata_data  INFO   [Thread-3] openjpa.jdbc.JDBC -
> >>>>> Using dictionary class "org.apache.openjpa.jdbc.sql.DerbyDic
> >>>>> tionary" (Apache Derby 10.9.1.0 - (1344872) ,Apache Derby Network
> >>>>> Client JDBC Driver 10.9.1.0 - (1344872)). [INFO] Deploying Web
> >>>>> service: airavata-registry-service-0.8.jar -
> >>>>> file:/C:/Users/Viknes/DOWNLO~1/APACHE~1.8-B/APACHE~1.8
> >>>>> /bin/../repository/services/airavata-registry-service-0.8.jar
> >>>>>
> >>>>>
> > [INFO] Deploying Web service: airavata-xbaya-gui-0.8.jar -
> >>>>> file:/C:/Users/Viknes/DOWNLO~1/APACHE~1.8-B/APACHE~1.8/bin/..
> >>>>>
> >>>>>
> > /repository/services/airavata-xbaya-gui-0.8.jar
> >>>>> [INFO] Deploying Web service: version-1.5.1.aar -
> >>>>> file:/C:/Users/Viknes/DOWNLO~1/APACHE~1.8-B/APACHE~1.8/bin/../repo
> >>>>> sit
> >>>>>
> >>>>>
> > o
> >>>>> ry/services/version-1.5.1.aar Jul 01, 2013 3:14:42 PM
> >>>>> org.apache.coyote.AbstractProtocol start INFO: Starting
> >>>>> ProtocolHandler ["http-bio-8080"] [ERROR] Unable to create
> >>>>> Airavata API
> >>>>>
> org.apache.airavata.client.api.exception.AiravataAPIInvocationException:
> >>>>>
> >>>>>
> > Error while initializing the Airavata API
> >>>>> at
> >>>>>
> >>>>> org.apache.airavata.client.AiravataAPIFactory.getAPI(AiravataAPIFa
> >>>>> cto
> >>>>>
> >>>>>
> > ry.java
> >>>>> :64) at
> >>>>>
> >>>>> org.apache.airavata.client.AiravataAPIFactory.getAPI(AiravataAPIFa
> >>>>> cto
> >>>>>
> >>>>>
> > ry.java
> >>>>> :43) at
> >>>>>
> >>>>> org.apache.airavata.client.AiravataAPIFactory.getAPI(AiravataAPIFa
> >>>>> cto
> >>>>>
> >>>>>
> > ry.java
> >>>>> :39) at
> >>>>>
> >>>>> org.apache.airavata.xbaya.interpretor.WorkflowInterpretorSkeleton.
> >>>>> get
> >>>>>
> >>>>>
> > Airavat
> >>>>> aAPI(WorkflowInterpretorSkeleton. java:122) at
> >>>>>
> >>>>> org.apache.airavata.xbaya.interpretor.WorkflowInterpretorSkeleton.
> >>>>> acc
> >>>>>
> >>>>>
> > ess$200
> >>>>> (WorkflowInterpretorSkeleton.java :78) at
> >>>>>
> >>>>> org.apache.airavata.xbaya.interpretor.WorkflowInterpretorSkeleton$
> >>>>> 1.r
> >>>>>
> >>>>>
> > un(Work
> >>>>> flowInterpretorSkeleton.java:158)
> >>>>>
> >>>>> Caused by:
> >>>>>
> org.apache.airavata.client.api.exception.AiravataAPIInvocationException:
> >>>>>
> >>>>>
> > Error while initializing the Airavat
> >>>>> a API at
> >>>>>
> >>>>> org.apache.airavata.client.AiravataClient.initialize(AiravataClien
> >>>>> t.j
> >>>>>
> >>>>>
> > ava:163
> >>>>> ) at
> >>>>>
> >>>>> org.apache.airavata.client.AiravataAPIFactory.getAPI(AiravataAPIFa
> >>>>> cto
> >>>>>
> >>>>>
> > ry.java
> >>>>> :61) ... 5 more Caused by: <openjpa-2.2.0-r422266:1244990 nonfatal
> >>>>> user error>
> >>>>> org.apache.openjpa.persistence.ArgumentException: An erro r
> >>>>> occurred while parsing the query filter "SELECT p FROM
> >>>>> Configuration p WHERE p.config_key =:param0". Error message:
> >>>>> Th e name "Configuration" is not a recognized entity or
> >>>>> identifier. Known entity names: [] at
> >>>>>
> >>>>> org.apache.openjpa.kernel.exps.AbstractExpressionBuilder.parseExce
> >>>>> pti
> >>>>>
> >>>>>
> > on(Abst
> >>>>> ractExpressionBuilder.java:119) at
> >>>>>
> >>>>> org.apache.openjpa.kernel.jpql.JPQLExpressionBuilder.getClassMetaD
> >>>>> ata
> >>>>>
> >>>>>
> > (JPQLEx
> >>>>> pressionBuilder.java:197) at
> >>>>>
> >>>>> org.apache.openjpa.kernel.jpql.JPQLExpressionBuilder.resolveClassM
> >>>>> eta
> >>>>>
> >>>>>
> > Data(JP
> >>>>> QLExpressionBuilder.java:167) at
> >>>>>
> >>>>> org.apache.openjpa.kernel.jpql.JPQLExpressionBuilder.getCandidateM
> >>>>> eta
> >>>>>
> >>>>>
> > Data(JP
> >>>>> QLExpressionBuilder.java:242) at
> >>>>>
> >>>>> org.apache.openjpa.kernel.jpql.JPQLExpressionBuilder.getCandidateM
> >>>>> eta
> >>>>>
> >>>>>
> > Data(JP
> >>>>> QLExpressionBuilder.java:212) at
> >>>>>
> >>>>> org.apache.openjpa.kernel.jpql.JPQLExpressionBuilder.getCandidateT
> >>>>> ype
> >>>>>
> >>>>>
> > (JPQLEx
> >>>>> pressionBuilder.java:205) at
> >>>>>
> >>>>> org.apache.openjpa.kernel.jpql.JPQLExpressionBuilder.access$200(JP
> >>>>> QLE
> >>>>>
> >>>>>
> > xpressi
> >>>>> onBuilder.java:80) at
> >>>>>
> >>>>> org.apache.openjpa.kernel.jpql.JPQLExpressionBuilder$ParsedJPQL.po
> >>>>> pul
> >>>>>
> >>>>>
> > ate(JPQ
> >>>>> LExpressionBuilder.java:2417) at
> >>>>> org.apache.openjpa.kernel.jpql.JPQLParser.populate(JPQLParser.java
> >>>>> :61)
> >>>>>
> >>>>>
> > at
> >>>>>
> >>>>> org.apache.openjpa.kernel.ExpressionStoreQuery.populateFromCompila
> >>>>> tio
> >>>>>
> >>>>>
> > n(Expre
> >>>>> ssionStoreQuery.java:162) at
> >>>>> org.apache.openjpa.kernel.QueryImpl.newCompilation(QueryImpl.java:
> >>>>> 673)
> >>>>>
> >>>>>
> > at
> >>>>>
> >>>>>
> >>> org.apache.openjpa.kernel.QueryImpl.compilationFromCache(QueryImpl.j
> >>> ava:654)
> >>>>>
> >>>
> > at
> >>>>>
> >>>>> org.apache.openjpa.kernel.QueryImpl.compileForCompilation(QueryImp
> >>>>> l.j
> >>>>>
> >>>>>
> > ava:620
> >>>>> ) at
> >>>>>
> >>> org.apache.openjpa.kernel.QueryImpl.compileForExecutor(QueryImpl.jav
> >>> a:682)
> >>>>>
> >>>
> > at org.apache.openjpa.kernel.QueryImpl.compile(QueryImpl.java:589)
> >>>>> at
> >>>>>
> >>>>> org.apache.openjpa.persistence.EntityManagerImpl.createQuery(Entit
> >>>>> yMa
> >>>>>
> >>>>>
> > nagerIm
> >>>>> pl.java:997) at
> >>>>>
> >>>>> org.apache.openjpa.persistence.EntityManagerImpl.createQuery(Entit
> >>>>> yMa
> >>>>>
> >>>>>
> > nagerIm
> >>>>> pl.java:979) at
> >>>>>
> >>>>> org.apache.openjpa.persistence.EntityManagerImpl.createQuery(Entit
> >>>>> yMa
> >>>>>
> >>>>>
> > nagerIm
> >>>>> pl.java:102) at
> >>>>>
> >>>>> org.apache.airavata.persistance.registry.jpa.utils.QueryGenerator.
> >>>>> gen
> >>>>>
> >>>>>
> > erateQu
> >>>>> eryWithParameters(QueryGenerator. java:95) at
> >>>>>
> >>>>> org.apache.airavata.persistance.registry.jpa.utils.QueryGenerator.
> >>>>> sel
> >>>>>
> >>>>>
> > ectQuer
> >>>>> y(QueryGenerator.java:64) at
> >>>>>
> >>>>> org.apache.airavata.persistance.registry.jpa.ResourceUtils.getConf
> >>>>> igu
> >>>>>
> >>>>>
> > rations
> >>>>> (ResourceUtils.java:205) at
> >>>>>
> >>>>> org.apache.airavata.persistance.registry.jpa.ResourceUtils.getConf
> >>>>> igu
> >>>>>
> >>>>>
> > ration(
> >>>>> ResourceUtils.java:223) at
> >>>>>
> >>>>> org.apache.airavata.persistance.registry.jpa.impl.AiravataJPARegis
> >>>>> try
> >>>>>
> >>>>>
> > .getCon
> >>>>> figuration(AiravataJPARegistry.ja va:226) at
> >>>>>
> >>>>> org.apache.airavata.persistance.registry.jpa.impl.AiravataJPARegis
> >>>>> try
> >>>>>
> >>>>>
> > .initia
> >>>>> lize(AiravataJPARegistry.java:159 ) at
> >>>>>
> >>>>> org.apache.airavata.registry.api.AiravataRegistryFactory.getRegist
> >>>>> ry(
> >>>>>
> >>>>>
> > Airavat
> >>>>> aRegistryFactory.java:81) at
> >>>>>
> >>>>> org.apache.airavata.client.AiravataClient.getRegistry(AiravataClient.
> >>>>>
> >>>>>
> > java:21
> >>>>> 6) at
> >>>>>
> >>>>> org.apache.airavata.client.AiravataClient.createConfig(AiravataCli
> >>>>> ent
> >>>>>
> >>>>>
> > .java:1
> >>>>> 12) at
> >>>>>
> >>>>> org.apache.airavata.client.AiravataClient.initialize(AiravataClien
> >>>>> t.j
> >>>>>
> >>>>>
> > ava:144
> >>>>> ) ... 6 more Exception in thread "Thread-29"
> >>>>> java.lang.NullPointerException at
> >>>>>
> >>>>> org.apache.airavata.xbaya.interpretor.WorkflowInterpretorSkeleton$
> >>>>> 1.r
> >>>>>
> >>>>>
> > un(Work
> >>>>> flowInterpretorSkeleton.java:159)
> >>>>>
> >>>>> Thanks Viknes
> >>>>>
> >>>>> -----Original Message----- From: Saminda Wijeratne
> >>>>> [mailto:samindaw@gmail.com] Sent: Monday, July 01, 2013 12:25 PM
> >>>>> To: dev@airavata.apache.org Subject: Re: [DISCUSS] Apache Airavata
> >>>>> Release 0.8 - RC3
> >>>>>
> >>>>> ok Suresh. Thanks.
> >>>>>
> >>>>>
> >>>>> On Mon, Jul 1, 2013 at 12:10 PM, Suresh Marru <smarru@apache.org>
> >>>>> wrote:
> >>>>>
> >>>>>> Hi Saminda,
> >>>>>>
> >>>>>> I should have mentioned this in the vote email. INFRA has
> >>>>>> restricted the distributions to 100MB and the war distribution is
> >>>>>> little over it. I made a request to manually checkin the war
> >>>>>> distribution. Until then, please use this link to get the war
> >>>>>> distribution:
> >>>>>>
> >>>>>> http://people.apache.org/~smarru/airavata_tmp_dist/
> >>>>>>
> >>>>>> Suresh
> >>>>>>
> >>>>>>
> >>>>>> On Jul 1, 2013, at 11:50 AM, Saminda Wijeratne
> >>>>>> <samindaw@gmail.com>
> >>>>> wrote:
> >>>>>>
> >>>>>>> Suresh, we are missing the war binary from the RC. Can you
> >>>>>>> include that
> >>>>>> as
> >>>>>>> well please.
> >>>>>>>
> >>>>>>>
> >>>>>>> On Mon, Jul 1, 2013 at 11:09 AM, Suresh Marru
> >>>>>>> <smarru@apache.org>
> >>>>> wrote:
> >>>>>>>
> >>>>>>>> Will appreciate if every one can rest this RC sooner than
> >>>>>>>> later. If we start seeing the release validation is going on
> >>>>>>>> well, we can open the
> >>>>>> trunk
> >>>>>>>> for development for 0.9.
> >>>>>>>>
> >>>>>>>> Suresh
> >>>>>>>>
> >>>>>>>> On Jul 1, 2013, at 12:06 AM, Suresh Marru <smarru@apache.org>
> >>>>>>>> wrote:
> >>>>>>>>
> >>>>>>>>> Discussion thread for vote on Apache Airavata 0.8 release
> >>>>>>>>> candidate
> >>>>> 3.
> >>>>>>>>>
> >>>>>>>>> If you have any questions or feedback or to post results of
> >>>>>>>>> validating
> >>>>>>>> the release, please reply to this thread. Once you verify the
> >>>>>>>> release, please post your vote to the VOTE thread.
> >>>>>>>>>
> >>>>>>>>> For reference, the Apache release guide  -
> >>>>>>>> http://www.apache.org/dev/release.html
> >>>>>>>>>
> >>>>>>>>> Some tips to validate the release before you vote:
> >>>>>>>>>
> >>>>>>>>> * Download the binary version and run the 5 minute or
> >>>>>>>>> 10 minute
> >>>>>> tutorial
> >>>>>>>> as described in README and website.
> >>>>>>>>> * Download the source files from compressed files and release
> >>>>>>>>> tag and
> >>>>>>>> build (which includes tests).
> >>>>>>>>> * Verify the distribution for the required LICENSE and NOTICE
> >>>>>>>>> files * Verify if all the staged files are signed and the
> >>>>>>>>> signature is
> >>>>>>>> verifiable.
> >>>>>>>>> * Verify if the signing key in the project's KEYS file is
> >>>>>>>>> hosted on a
> >>>>>>>> public server
> >>>>>>>>>
> >>>>>>>>> Thanks for your time in validating the release and voting,
> >>>>>>>>> Suresh (On Behalf of Airavata PMC)
> >>>>>>>>
> >>>>>>>>
> >>>>>>
> >>>>>>
> >>>>>
> >>>
> >>
> > -----BEGIN PGP SIGNATURE-----
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> > Comment: GPGTools - http://gpgtools.org
> > Comment: Using GnuPG with Thunderbird - http://www.enigmail.net/
> >
> > iQEcBAEBAgAGBQJR1FNcAAoJEOEgD2XReDo57F0H/jnW2iy993DtKasYJEz03rWq
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> > =4mIG
> > -----END PGP SIGNATURE-----
>
>

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