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From "Shinyoung Ahn (JIRA)" <j...@apache.org>
Subject [jira] [Created] (AIRAVATA-820) Parameter mismatching when using ForEach
Date Thu, 11 Apr 2013 00:27:16 GMT
Shinyoung Ahn created AIRAVATA-820:
--------------------------------------

             Summary: Parameter mismatching when using ForEach 
                 Key: AIRAVATA-820
                 URL: https://issues.apache.org/jira/browse/AIRAVATA-820
             Project: Airavata
          Issue Type: Bug
            Reporter: Shinyoung Ahn


When an application have three parameters, fir and second parameter's type is String type
and
the third parameter is StringArray type.

Third parameter is connected to ForEach.

When I execute the applications
Airavat show unexpected behavior like below. 'Invoking service' do not use right value that
I expected…
I expect the input parameters’ values of bwa_aln_fwd_p_invoke are same with the parameter
of 'WorkflowInvoked'.

The Notification Message as follows
-----------------------------------------------------------------------------------------------------------------
Status'workflowInvoked' 
<ns:workflowInvoked infoModelVersion="2.6"
  xmlns:ns="http://airavata.apache.org/schemas/wft/2011/08">
  <ns:notificationSource ns:serviceID="Workflow1_b8721d2f_d131_4ec3_bbb3_6fe12f528ed8"
ns:experimentID="Workflow1_b8721d2f-d131-4ec3-bbb3-6fe12f528ed8" />
  <ns:timestamp>2013-04-11T09:15:41.988+09:00</ns:timestamp>
  <ns:description>thread=4, refIndexFile=/home/team/genome/bwaindex/chr22.fa, Input=/home/team/genome/Demo/sample_1.fq.00,/home/team/genome/Demo/sample_1.fq.01,
Input=/home/team/genome/Demo/sample_1.fq.00,/home/team/genome/Demo/sample_1.fq.01</ns:description>
  <ns:annotation />
  <ns:initiator ns:serviceID="Workflow1_b8721d2f_d131_4ec3_bbb3_6fe12f528ed8" />
</ns:workflowInvoked>

-------------------------------------------------------------------------------------------------------------------
Status: invokingService
<ns:invokingService infoModelVersion="2.6"
  xmlns:ns="http://airavata.apache.org/schemas/wft/2011/08">
  <ns:notificationSource ns:serviceID="Workflow1_b8721d2f_d131_4ec3_bbb3_6fe12f528ed8"
ns:experimentID="Workflow1_b8721d2f-d131-4ec3-bbb3-6fe12f528ed8" />
  <ns:timestamp>2013-04-11T09:15:42.240+09:00</ns:timestamp>
  <ns:description>thread=/home/team/genome/Demo/sample_1.fq.00, refIndexFile=/home/team/genome/Demo/sample_1.fq.00,
bwdFqFile=/home/team/genome/Demo/sample_1.fq.00</ns:description>
  <ns:annotation />
  <ns:request>
    <ns:body>
      <n1:invoke_InputParams
        xmlns:n1="http://airavata.apache.org/schemas/gfac/2012/12/bwa_aln_bwd/xsd">
        <thread>/home/team/genome/Demo/sample_1.fq.00</thread>
        <refIndexFile>/home/team/genome/Demo/sample_1.fq.00</refIndexFile>
        <bwdFqFile>/home/team/genome/Demo/sample_1.fq.00</bwdFqFile>
      </n1:invoke_InputParams>
    </ns:body>
  </ns:request>
  <ns:receiver ns:serviceID="bwa_aln_bwd_invoke" ns:workflowID="Workflow1_b8721d2f_d131_4ec3_bbb3_6fe12f528ed8"
ns:workflowTimestep="0" ns:workflowNodeID="bwa_aln_bwd_invoke" />
</ns:invokingService>

-------------------------------------------------------------------------------------------------------------------------

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