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From Raminder Singh <raminderjsi...@gmail.com>
Subject Re: Proxy life time
Date Mon, 04 Feb 2013 18:54:15 GMT
Yes this is strange. Can you try to find airavata-server.properties properties and see you
updated the right property file? I have checked the code and its reading from the property
file. \

> [ERROR] The connection to the server failed (check host and port) [Caused
> by: Connection refused]
This error is problem with gram client when its not able to connect to same job handler after
renewing proxy. In some case if the job finish during the proxy was renewed then Gram API
will above error. 

Thanks
Raminder

On Feb 1, 2013, at 6:17 PM, Pedro da Silveira wrote:

> Hi Devs,
> 
> I updated the the file "airavata-server.properties"
> from "myproxy.life=3600" to "myproxy.life=172800". Then I restarted my
> Airavata Server and Xbaya.
> I had a workflow that was running for about 15 hours. In the Airavata
> Server log was informing that my proxy was renewing for 3600 lifetime:
> 
> 
> ===================================================================
> [INFO] job
> https://gridftp1.ls4.tacc.utexas.edu:50383/16289813886031905366/8943296923860001466/have
> same status: ACTIVE
> [INFO] Job proxy expired. Trying to renew proxy
> org.globus.gsi.gssapi.GlobusGSSCredentialImpl@8e5d057
> [INFO] Proxy file renewed to
> /tmp/x509up_uogcee6be0135-395e-440e-a402-b9f012492582 for the user ogce
> with 3600 lifetime.
> [INFO] Myproxy renewed
> [INFO] job
> https://gridftp1.ls4.tacc.utexas.edu:50383/16289813886031905366/8943296923860001466/have
> same status: ACTIVE
> ===================================================================
> 
> When my job successfully finished I still got the error message on the
> Apache Airavata Server:
> 
> 
> ===================================================================
> [INFO] job
> https://gridftp1.ls4.tacc.utexas.edu:50383/16289813886031905366/8943296923860001466/have
> same status: ACTIVE
> [INFO] Job proxy expired. Trying to renew proxy
> org.globus.gsi.gssapi.GlobusGSSCredentialImpl@415c515e
> [INFO] Proxy file renewed to
> /tmp/x509up_uogcecd28decc-eb9d-469b-af77-380b26a7020c for the user ogce
> with 3600 lifetime.
> [ERROR] Context passed was NULL.
> java.lang.RuntimeException: Context passed was NULL.
> at
> org.apache.airavata.workflow.tracking.impl.ProvenanceNotifierImpl.sendingFault(ProvenanceNotifierImpl.java:496)
> at
> org.apache.airavata.workflow.tracking.impl.ProvenanceNotifierImpl.sendingFault(ProvenanceNotifierImpl.java:485)
> at
> org.apache.airavata.core.gfac.notification.impl.WorkflowTrackingNotification.executionFail(WorkflowTrackingNotification.java:108)
> at
> org.apache.airavata.core.gfac.notification.impl.DefaultNotifier.executionFail(DefaultNotifier.java:135)
> at
> org.apache.airavata.core.gfac.exception.JobSubmissionFault.sendFaultNotification(JobSubmissionFault.java:52)
> at
> org.apache.airavata.core.gfac.provider.impl.GramProvider.executeApplication(GramProvider.java:231)
> at
> org.apache.airavata.core.gfac.provider.AbstractProvider.execute(AbstractProvider.java:69)
> at
> org.apache.airavata.core.gfac.services.impl.AbstractSimpleService.execute(AbstractSimpleService.java:118)
> at org.apache.airavata.core.gfac.GfacAPI.gridJobSubmit(GfacAPI.java:140)
> at
> org.apache.airavata.xbaya.invoker.EmbeddedGFacInvoker.invoke(EmbeddedGFacInvoker.java:256)
> at
> org.apache.airavata.xbaya.interpretor.WorkflowInterpreter.handleWSComponent(WorkflowInterpreter.java:749)
> at
> org.apache.airavata.xbaya.interpretor.WorkflowInterpreter.executeDynamically(WorkflowInterpreter.java:533)
> at
> org.apache.airavata.xbaya.interpretor.WorkflowInterpreter.scheduleDynamically(WorkflowInterpreter.java:218)
> at
> org.apache.airavata.xbaya.interpretor.WorkflowInterpretorSkeleton.executeWorkflow(WorkflowInterpretorSkeleton.java:389)
> at
> org.apache.airavata.xbaya.interpretor.WorkflowInterpretorSkeleton.access$400(WorkflowInterpretorSkeleton.java:87)
> at
> org.apache.airavata.xbaya.interpretor.WorkflowInterpretorSkeleton$2.run(WorkflowInterpretorSkeleton.java:382)
> at java.lang.Thread.run(Thread.java:680)
> [INFO] -----DATA-----
> [INFO] lonestar4.tacc.teragrid.org,&( queue = "normal" )( stdout =
> "/scratch/01437/ogce/Vlab/Phonon/__p4_14/AppPhonon_Thu_Jan_31_19_04_24_CST_2013_cffbf571-663d-4642-a095-dca3a3da887f/lonestar_application.stdout"
> )( count = "72" )( executable =
> "/scratch/01437/ogce/Vlab/Phonon/executePhonon_test2.sh" )( stderr =
> "/scratch/01437/ogce/Vlab/Phonon/__p4_14/AppPhonon_Thu_Jan_31_19_04_24_CST_2013_cffbf571-663d-4642-a095-dca3a3da887f/lonestar_application.stderr"
> )( maxwalltime = "1440" )( hostCount = "6" )( minmemory = "10240" )(
> project = "TG-STA110014S" )( jobtype = "mpi" )( environment = ( "inputData"
> "/scratch/01437/ogce/Vlab/Phonon/__p4_14/AppPhonon_Thu_Jan_31_19_04_24_CST_2013_cffbf571-663d-4642-a095-dca3a3da887f/inputData"
> ) ( "outputData"
> "/scratch/01437/ogce/Vlab/Phonon/__p4_14/AppPhonon_Thu_Jan_31_19_04_24_CST_2013_cffbf571-663d-4642-a095-dca3a3da887f/outputData"
> ) )( proxy_timeout = "1" )( arguments =
> "///scratch/01437/ogce/Vlab/Phonon/__p4_14/AppPhonon_Thu_Jan_31_19_04_24_CST_2013_cffbf571-663d-4642-a095-dca3a3da887f/inputData/Phonon_Input"
> )( directory =
> "/scratch/01437/ogce/Vlab/Phonon/__p4_14/AppPhonon_Thu_Jan_31_19_04_24_CST_2013_cffbf571-663d-4642-a095-dca3a3da887f"
> )( maxmemory = "15360" )
> [INFO] -----END DATA-----
> [ERROR] The connection to the server failed (check host and port) [Caused
> by: Connection refused]
> org.apache.airavata.core.gfac.exception.JobSubmissionFault: The connection
> to the server failed (check host and port) [Caused by: Connection refused]
> at
> org.apache.airavata.core.gfac.provider.impl.GramProvider.executeApplication(GramProvider.java:229)
> at
> org.apache.airavata.core.gfac.provider.AbstractProvider.execute(AbstractProvider.java:69)
> at
> org.apache.airavata.core.gfac.services.impl.AbstractSimpleService.execute(AbstractSimpleService.java:118)
> at org.apache.airavata.core.gfac.GfacAPI.gridJobSubmit(GfacAPI.java:140)
> at
> org.apache.airavata.xbaya.invoker.EmbeddedGFacInvoker.invoke(EmbeddedGFacInvoker.java:256)
> at
> org.apache.airavata.xbaya.interpretor.WorkflowInterpreter.handleWSComponent(WorkflowInterpreter.java:749)
> at
> org.apache.airavata.xbaya.interpretor.WorkflowInterpreter.executeDynamically(WorkflowInterpreter.java:533)
> at
> org.apache.airavata.xbaya.interpretor.WorkflowInterpreter.scheduleDynamically(WorkflowInterpreter.java:218)
> at
> org.apache.airavata.xbaya.interpretor.WorkflowInterpretorSkeleton.executeWorkflow(WorkflowInterpretorSkeleton.java:389)
> at
> org.apache.airavata.xbaya.interpretor.WorkflowInterpretorSkeleton.access$400(WorkflowInterpretorSkeleton.java:87)
> at
> org.apache.airavata.xbaya.interpretor.WorkflowInterpretorSkeleton$2.run(WorkflowInterpretorSkeleton.java:382)
> at java.lang.Thread.run(Thread.java:680)
> Caused by: org.globus.gram.GramException: The connection to the server
> failed (check host and port) [Caused by: Connection refused]
> at org.globus.gram.Gram.renew(Gram.java:595)
> at org.globus.gram.GramJob.renew(GramJob.java:329)
> at org.globus.gram.GramJob.renew(GramJob.java:315)
> at
> org.apache.airavata.core.gfac.provider.utils.JobSubmissionListener.waitFor(JobSubmissionListener.java:72)
> at
> org.apache.airavata.core.gfac.provider.impl.GramProvider.executeApplication(GramProvider.java:206)
> ... 11 more
> Exception in thread "Thread-42"
> org.apache.airavata.workflow.model.exceptions.WorkflowRuntimeException:
> org.apache.airavata.workflow.model.exceptions.WorkflowException: The
> connection to the server failed (check host and port) [Caused by:
> Connection refused]
> at
> org.apache.airavata.xbaya.interpretor.WorkflowInterpretorSkeleton.executeWorkflow(WorkflowInterpretorSkeleton.java:392)
> at
> org.apache.airavata.xbaya.interpretor.WorkflowInterpretorSkeleton.access$400(WorkflowInterpretorSkeleton.java:87)
> at
> org.apache.airavata.xbaya.interpretor.WorkflowInterpretorSkeleton$2.run(WorkflowInterpretorSkeleton.java:382)
> at java.lang.Thread.run(Thread.java:680)
> Caused by: org.apache.airavata.workflow.model.exceptions.WorkflowException:
> The connection to the server failed (check host and port) [Caused by:
> Connection refused]
> at
> org.apache.airavata.xbaya.invoker.EmbeddedGFacInvoker.invoke(EmbeddedGFacInvoker.java:321)
> at
> org.apache.airavata.xbaya.interpretor.WorkflowInterpreter.handleWSComponent(WorkflowInterpreter.java:749)
> at
> org.apache.airavata.xbaya.interpretor.WorkflowInterpreter.executeDynamically(WorkflowInterpreter.java:533)
> at
> org.apache.airavata.xbaya.interpretor.WorkflowInterpreter.scheduleDynamically(WorkflowInterpreter.java:218)
> at
> org.apache.airavata.xbaya.interpretor.WorkflowInterpretorSkeleton.executeWorkflow(WorkflowInterpretorSkeleton.java:389)
> ... 3 more
> Caused by: org.apache.airavata.core.gfac.exception.JobSubmissionFault: The
> connection to the server failed (check host and port) [Caused by:
> Connection refused]
> at
> org.apache.airavata.core.gfac.provider.impl.GramProvider.executeApplication(GramProvider.java:229)
> at
> org.apache.airavata.core.gfac.provider.AbstractProvider.execute(AbstractProvider.java:69)
> at
> org.apache.airavata.core.gfac.services.impl.AbstractSimpleService.execute(AbstractSimpleService.java:118)
> at org.apache.airavata.core.gfac.GfacAPI.gridJobSubmit(GfacAPI.java:140)
> at
> org.apache.airavata.xbaya.invoker.EmbeddedGFacInvoker.invoke(EmbeddedGFacInvoker.java:256)
> ... 7 more
> Caused by: org.globus.gram.GramException: The connection to the server
> failed (check host and port) [Caused by: Connection refused]
> at org.globus.gram.Gram.renew(Gram.java:595)
> at org.globus.gram.GramJob.renew(GramJob.java:329)
> at org.globus.gram.GramJob.renew(GramJob.java:315)
> at
> org.apache.airavata.core.gfac.provider.utils.JobSubmissionListener.waitFor(JobSubmissionListener.java:72)
> at
> org.apache.airavata.core.gfac.provider.impl.GramProvider.executeApplication(GramProvider.java:206)
> ... 11 more
> 
> [WARN] User : admin Failed login attempt to system at 2013-02-01 17:06:25
> Feb 1, 2013 5:06:25 PM com.sun.jersey.spi.container.servlet.WebComponent
> filterFormParameters
> 
> ===================================================================
> 
> Is there any work around to avoid this error message?
> 
> Thank you,
> 
> Pedro da Silveira


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