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From Lahiru Gunathilake <glah...@gmail.com>
Subject Re: Update cog-jglobus to bc146
Date Fri, 08 Feb 2013 19:34:23 GMT
Hi Shahbaz,

So you are getting this error when you have your unicore libraries in your
repo ? Can you please try building removing unicore jars and see whether
this works.

I doubt about you using /~ to represent your home directory, can you again
try with full qualified paths.

Lahiru

On Fri, Feb 8, 2013 at 1:09 PM, Shahbaz Memon <m.memon@fz-juelich.de> wrote:

> Hi Lahiru,
>
> > Can you send us the error ? I got some errors when I run with my IDE but
> > when I run in maven it works fine.
>
> After invoking "mvn test" on gfac-core, GramProviderTest complains
> with the following trace.
>
> .... <log truncated>
> [main] INFO  utils.GramJobSubmissionListener  - temp directory =
> gsiftp://
> gridftp.ranger.tacc.teragrid.org:2811/~/xsede-text/t1/SimpleEcho_Fri_Feb_08_18_10_01_CET_2013_f45af2be-d7a7-4958-ab66-ecf25d3884aa
> [main] INFO  utils.GramJobSubmissionListener  - Working directory =
> gsiftp://
> gridftp.ranger.tacc.teragrid.org:2811/~/xsede-text/t1/SimpleEcho_Fri_Feb_08_18_10_01_CET_2013_f45af2be-d7a7-4958-ab66-ecf25d3884aa
> [main] INFO  utils.GramJobSubmissionListener  - Input directory =
> gsiftp://
> gridftp.ranger.tacc.teragrid.org:2811/~/xsede-text/t1/SimpleEcho_Fri_Feb_08_18_10_01_CET_2013_f45af2be-d7a7-4958-ab66-ecf25d3884aa/inputData
> [main] INFO  utils.GramJobSubmissionListener  - Output directory =
> gsiftp://
> gridftp.ranger.tacc.teragrid.org:2811/~/xsede-text/t1/SimpleEcho_Fri_Feb_08_18_10_01_CET_2013_f45af2be-d7a7-4958-ab66-ecf25d3884aa/outputData
> [main] INFO  external.GridFtp  - Creating Directory =
> gridftp.ranger.tacc.teragrid.org:2811
> =/~/xsede-text/t1/SimpleEcho_Fri_Feb_08_18_10_01_CET_2013_f45af2be-d7a7-4958-ab66-ecf25d3884aa
> [main] WARN  external.GridFtp  - Cannot close GridFTP client connection
> java.net.SocketException: Socket closed
>         at
> java.net.SocketOutputStream.socketWrite(SocketOutputStream.java:99)
>         at java.net.SocketOutputStream.write(SocketOutputStream.java:136)
>         at
> java.io.BufferedOutputStream.flushBuffer(BufferedOutputStream.java:65)
>         at
> java.io.BufferedOutputStream.flush(BufferedOutputStream.java:123)
>         at
> org.globus.ftp.extended.GridFTPOutputStream.writeToken(GridFTPOutputStream.java:59)
>         at
> org.globus.ftp.extended.GridFTPOutputStream.flush(GridFTPOutputStream.java:42)
>         at
> org.globus.gsi.gssapi.net.GssOutputStream.flushData(GssOutputStream.java:115)
>         at
> org.globus.gsi.gssapi.net.GssOutputStream.close(GssOutputStream.java:122)
>         at
> org.globus.ftp.vanilla.FTPControlChannel.close(FTPControlChannel.java:267)
>         at org.globus.ftp.FTPClient.close(FTPClient.java:958)
>         at org.globus.ftp.FTPClient.close(FTPClient.java:930)
>         at
> org.apache.airavata.gfac.external.GridFtp.makeDir(GridFtp.java:124)
>         at
> org.apache.airavata.gfac.handler.GramDirectorySetupHandler.invoke(GramDirectorySetupHandler.java:81)
>         at
> org.apache.airavata.gfac.GFacAPI.invokeInFlowHandlers(GFacAPI.java:131)
>         at org.apache.airavata.gfac.GFacAPI.schedule(GFacAPI.java:63)
>         at org.apache.airavata.gfac.GFacAPI.submitJob(GFacAPI.java:53)
>         at
> org.apache.airavata.core.gfac.services.impl.GramProviderTest.testGramProvider(GramProviderTest.java:163)
>         at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
>         at
> sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:39)
>         at
> sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:25)
>         at java.lang.reflect.Method.invoke(Method.java:597)
>         at
> org.junit.runners.model.FrameworkMethod$1.runReflectiveCall(FrameworkMethod.java:44)
>         at
> org.junit.internal.runners.model.ReflectiveCallable.run(ReflectiveCallable.java:15)
>         at
> org.junit.runners.model.FrameworkMethod.invokeExplosively(FrameworkMethod.java:41)
>         at
> org.junit.internal.runners.statements.InvokeMethod.evaluate(InvokeMethod.java:20)
>         at
> org.junit.internal.runners.statements.RunBefores.evaluate(RunBefores.java:28)
>         at
> org.junit.runners.BlockJUnit4ClassRunner.runChild(BlockJUnit4ClassRunner.java:76)
>         at
> org.junit.runners.BlockJUnit4ClassRunner.runChild(BlockJUnit4ClassRunner.java:50)
>         at org.junit.runners.ParentRunner$3.run(ParentRunner.java:193)
>         at org.junit.runners.ParentRunner$1.schedule(ParentRunner.java:52)
>         at
> org.junit.runners.ParentRunner.runChildren(ParentRunner.java:191)
>         at org.junit.runners.ParentRunner.access$000(ParentRunner.java:42)
>         at org.junit.runners.ParentRunner$2.evaluate(ParentRunner.java:184)
>         at org.junit.runners.ParentRunner.run(ParentRunner.java:236)
>         at
> org.apache.maven.surefire.junit4.JUnit4Provider.execute(JUnit4Provider.java:236)
>         at
> org.apache.maven.surefire.junit4.JUnit4Provider.executeTestSet(JUnit4Provider.java:134)
>         at
> org.apache.maven.surefire.junit4.JUnit4Provider.invoke(JUnit4Provider.java:113)
>         at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
>         at
> sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:39)
>         at
> sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:25)
>         at java.lang.reflect.Method.invoke(Method.java:597)
>         at
> org.apache.maven.surefire.util.ReflectionUtils.invokeMethodWithArray(ReflectionUtils.java:189)
>         at
> org.apache.maven.surefire.booter.ProviderFactory$ProviderProxy.invoke(ProviderFactory.java:165)
>         at
> org.apache.maven.surefire.booter.ProviderFactory.invokeProvider(ProviderFactory.java:85)
>         at
> org.apache.maven.surefire.booter.ForkedBooter.runSuitesInProcess(ForkedBooter.java:103)
>         at
> org.apache.maven.surefire.booter.ForkedBooter.main(ForkedBooter.java:74)
> [main] INFO  gfac-logginglistener  - GFac event of type
> ExecutionFailEvent received.
> [main] ERROR gfac-logginglistener  - Execution failed.ExecutionFailEvent
>
> Tests run: 1, Failures: 0, Errors: 1, Skipped: 0, Time elapsed: 28.448
> sec <<< FAILURE!
>
>
> Results :
>
> Tests in error:
>
> testGramProvider(org.apache.airavata.core.gfac.services.impl.GramProviderTest):
> Error Executing a InFlow Handler
>
> I see no problems reaching ranger's home folder if I connect (from the
> same host) with the command line interface provided by globus online.
>
> Thanks.
>
> Shahbaz
>
> On Fri, Feb 8, 2013 at 4:08 PM, Lahiru Gunathilake <glahiru@gmail.com>
> wrote:
> > Hi Shabhaz,
> >
> > Please write to the mailing list.
> >
> > Can you send us the error ? I got some errors when I run with my IDE but
> > when I run in maven it works fine.
> >
> > Regards
> > Lahiru
> >
> > 2013/2/8 Shahbaz Memon <m.memon@fz-juelich.de>
> >>
> >> Hi,
> >>
> >> I am unable to run GramProvider test case because of cog's dependency
> >> conflict with bouncycastle146. Please could you update cog-jglobus
> >> patch to the bc146?
> >>
> >> Cheers,
> >>
> >> Shahbaz
> >>
> >>
> >>
> >>
> ------------------------------------------------------------------------------------------------
> >>
> >>
> ------------------------------------------------------------------------------------------------
> >> Forschungszentrum Juelich GmbH
> >> 52425 Juelich
> >> Sitz der Gesellschaft: Juelich
> >> Eingetragen im Handelsregister des Amtsgerichts Dueren Nr. HR B 3498
> >> Vorsitzender des Aufsichtsrats: MinDir Dr. Karl Eugen Huthmacher
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> >> Karsten Beneke (stellv. Vorsitzender), Prof. Dr.-Ing. Harald Bolt,
> >> Prof. Dr. Sebastian M. Schmidt
> >>
> >>
> ------------------------------------------------------------------------------------------------
> >>
> >>
> ------------------------------------------------------------------------------------------------
> >
> >
> >
> >
> > --
> > System Analyst Programmer
> > PTI Lab
> > Indiana University
>



-- 
System Analyst Programmer
PTI Lab
Indiana University

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