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From Pedro da Silveira <pedro...@gmail.com>
Subject Proxy life time
Date Fri, 01 Feb 2013 23:17:34 GMT
Hi Devs,

I updated the the file "airavata-server.properties"
from "myproxy.life=3600" to "myproxy.life=172800". Then I restarted my
Airavata Server and Xbaya.
I had a workflow that was running for about 15 hours. In the Airavata
Server log was informing that my proxy was renewing for 3600 lifetime:


===================================================================
[INFO] job
https://gridftp1.ls4.tacc.utexas.edu:50383/16289813886031905366/8943296923860001466/have
same status: ACTIVE
[INFO] Job proxy expired. Trying to renew proxy
org.globus.gsi.gssapi.GlobusGSSCredentialImpl@8e5d057
[INFO] Proxy file renewed to
/tmp/x509up_uogcee6be0135-395e-440e-a402-b9f012492582 for the user ogce
with 3600 lifetime.
[INFO] Myproxy renewed
[INFO] job
https://gridftp1.ls4.tacc.utexas.edu:50383/16289813886031905366/8943296923860001466/have
same status: ACTIVE
===================================================================

When my job successfully finished I still got the error message on the
Apache Airavata Server:


===================================================================
[INFO] job
https://gridftp1.ls4.tacc.utexas.edu:50383/16289813886031905366/8943296923860001466/have
same status: ACTIVE
[INFO] Job proxy expired. Trying to renew proxy
org.globus.gsi.gssapi.GlobusGSSCredentialImpl@415c515e
[INFO] Proxy file renewed to
/tmp/x509up_uogcecd28decc-eb9d-469b-af77-380b26a7020c for the user ogce
with 3600 lifetime.
[ERROR] Context passed was NULL.
java.lang.RuntimeException: Context passed was NULL.
at
org.apache.airavata.workflow.tracking.impl.ProvenanceNotifierImpl.sendingFault(ProvenanceNotifierImpl.java:496)
at
org.apache.airavata.workflow.tracking.impl.ProvenanceNotifierImpl.sendingFault(ProvenanceNotifierImpl.java:485)
at
org.apache.airavata.core.gfac.notification.impl.WorkflowTrackingNotification.executionFail(WorkflowTrackingNotification.java:108)
at
org.apache.airavata.core.gfac.notification.impl.DefaultNotifier.executionFail(DefaultNotifier.java:135)
at
org.apache.airavata.core.gfac.exception.JobSubmissionFault.sendFaultNotification(JobSubmissionFault.java:52)
at
org.apache.airavata.core.gfac.provider.impl.GramProvider.executeApplication(GramProvider.java:231)
at
org.apache.airavata.core.gfac.provider.AbstractProvider.execute(AbstractProvider.java:69)
at
org.apache.airavata.core.gfac.services.impl.AbstractSimpleService.execute(AbstractSimpleService.java:118)
at org.apache.airavata.core.gfac.GfacAPI.gridJobSubmit(GfacAPI.java:140)
at
org.apache.airavata.xbaya.invoker.EmbeddedGFacInvoker.invoke(EmbeddedGFacInvoker.java:256)
at
org.apache.airavata.xbaya.interpretor.WorkflowInterpreter.handleWSComponent(WorkflowInterpreter.java:749)
at
org.apache.airavata.xbaya.interpretor.WorkflowInterpreter.executeDynamically(WorkflowInterpreter.java:533)
at
org.apache.airavata.xbaya.interpretor.WorkflowInterpreter.scheduleDynamically(WorkflowInterpreter.java:218)
at
org.apache.airavata.xbaya.interpretor.WorkflowInterpretorSkeleton.executeWorkflow(WorkflowInterpretorSkeleton.java:389)
at
org.apache.airavata.xbaya.interpretor.WorkflowInterpretorSkeleton.access$400(WorkflowInterpretorSkeleton.java:87)
at
org.apache.airavata.xbaya.interpretor.WorkflowInterpretorSkeleton$2.run(WorkflowInterpretorSkeleton.java:382)
at java.lang.Thread.run(Thread.java:680)
[INFO] -----DATA-----
[INFO] lonestar4.tacc.teragrid.org,&( queue = "normal" )( stdout =
"/scratch/01437/ogce/Vlab/Phonon/__p4_14/AppPhonon_Thu_Jan_31_19_04_24_CST_2013_cffbf571-663d-4642-a095-dca3a3da887f/lonestar_application.stdout"
)( count = "72" )( executable =
"/scratch/01437/ogce/Vlab/Phonon/executePhonon_test2.sh" )( stderr =
"/scratch/01437/ogce/Vlab/Phonon/__p4_14/AppPhonon_Thu_Jan_31_19_04_24_CST_2013_cffbf571-663d-4642-a095-dca3a3da887f/lonestar_application.stderr"
)( maxwalltime = "1440" )( hostCount = "6" )( minmemory = "10240" )(
project = "TG-STA110014S" )( jobtype = "mpi" )( environment = ( "inputData"
"/scratch/01437/ogce/Vlab/Phonon/__p4_14/AppPhonon_Thu_Jan_31_19_04_24_CST_2013_cffbf571-663d-4642-a095-dca3a3da887f/inputData"
) ( "outputData"
"/scratch/01437/ogce/Vlab/Phonon/__p4_14/AppPhonon_Thu_Jan_31_19_04_24_CST_2013_cffbf571-663d-4642-a095-dca3a3da887f/outputData"
) )( proxy_timeout = "1" )( arguments =
"///scratch/01437/ogce/Vlab/Phonon/__p4_14/AppPhonon_Thu_Jan_31_19_04_24_CST_2013_cffbf571-663d-4642-a095-dca3a3da887f/inputData/Phonon_Input"
)( directory =
"/scratch/01437/ogce/Vlab/Phonon/__p4_14/AppPhonon_Thu_Jan_31_19_04_24_CST_2013_cffbf571-663d-4642-a095-dca3a3da887f"
)( maxmemory = "15360" )
[INFO] -----END DATA-----
[ERROR] The connection to the server failed (check host and port) [Caused
by: Connection refused]
org.apache.airavata.core.gfac.exception.JobSubmissionFault: The connection
to the server failed (check host and port) [Caused by: Connection refused]
at
org.apache.airavata.core.gfac.provider.impl.GramProvider.executeApplication(GramProvider.java:229)
at
org.apache.airavata.core.gfac.provider.AbstractProvider.execute(AbstractProvider.java:69)
at
org.apache.airavata.core.gfac.services.impl.AbstractSimpleService.execute(AbstractSimpleService.java:118)
at org.apache.airavata.core.gfac.GfacAPI.gridJobSubmit(GfacAPI.java:140)
at
org.apache.airavata.xbaya.invoker.EmbeddedGFacInvoker.invoke(EmbeddedGFacInvoker.java:256)
at
org.apache.airavata.xbaya.interpretor.WorkflowInterpreter.handleWSComponent(WorkflowInterpreter.java:749)
at
org.apache.airavata.xbaya.interpretor.WorkflowInterpreter.executeDynamically(WorkflowInterpreter.java:533)
at
org.apache.airavata.xbaya.interpretor.WorkflowInterpreter.scheduleDynamically(WorkflowInterpreter.java:218)
at
org.apache.airavata.xbaya.interpretor.WorkflowInterpretorSkeleton.executeWorkflow(WorkflowInterpretorSkeleton.java:389)
at
org.apache.airavata.xbaya.interpretor.WorkflowInterpretorSkeleton.access$400(WorkflowInterpretorSkeleton.java:87)
at
org.apache.airavata.xbaya.interpretor.WorkflowInterpretorSkeleton$2.run(WorkflowInterpretorSkeleton.java:382)
at java.lang.Thread.run(Thread.java:680)
Caused by: org.globus.gram.GramException: The connection to the server
failed (check host and port) [Caused by: Connection refused]
at org.globus.gram.Gram.renew(Gram.java:595)
at org.globus.gram.GramJob.renew(GramJob.java:329)
at org.globus.gram.GramJob.renew(GramJob.java:315)
at
org.apache.airavata.core.gfac.provider.utils.JobSubmissionListener.waitFor(JobSubmissionListener.java:72)
at
org.apache.airavata.core.gfac.provider.impl.GramProvider.executeApplication(GramProvider.java:206)
... 11 more
Exception in thread "Thread-42"
org.apache.airavata.workflow.model.exceptions.WorkflowRuntimeException:
org.apache.airavata.workflow.model.exceptions.WorkflowException: The
connection to the server failed (check host and port) [Caused by:
Connection refused]
at
org.apache.airavata.xbaya.interpretor.WorkflowInterpretorSkeleton.executeWorkflow(WorkflowInterpretorSkeleton.java:392)
at
org.apache.airavata.xbaya.interpretor.WorkflowInterpretorSkeleton.access$400(WorkflowInterpretorSkeleton.java:87)
at
org.apache.airavata.xbaya.interpretor.WorkflowInterpretorSkeleton$2.run(WorkflowInterpretorSkeleton.java:382)
at java.lang.Thread.run(Thread.java:680)
Caused by: org.apache.airavata.workflow.model.exceptions.WorkflowException:
The connection to the server failed (check host and port) [Caused by:
Connection refused]
at
org.apache.airavata.xbaya.invoker.EmbeddedGFacInvoker.invoke(EmbeddedGFacInvoker.java:321)
at
org.apache.airavata.xbaya.interpretor.WorkflowInterpreter.handleWSComponent(WorkflowInterpreter.java:749)
at
org.apache.airavata.xbaya.interpretor.WorkflowInterpreter.executeDynamically(WorkflowInterpreter.java:533)
at
org.apache.airavata.xbaya.interpretor.WorkflowInterpreter.scheduleDynamically(WorkflowInterpreter.java:218)
at
org.apache.airavata.xbaya.interpretor.WorkflowInterpretorSkeleton.executeWorkflow(WorkflowInterpretorSkeleton.java:389)
... 3 more
Caused by: org.apache.airavata.core.gfac.exception.JobSubmissionFault: The
connection to the server failed (check host and port) [Caused by:
Connection refused]
at
org.apache.airavata.core.gfac.provider.impl.GramProvider.executeApplication(GramProvider.java:229)
at
org.apache.airavata.core.gfac.provider.AbstractProvider.execute(AbstractProvider.java:69)
at
org.apache.airavata.core.gfac.services.impl.AbstractSimpleService.execute(AbstractSimpleService.java:118)
at org.apache.airavata.core.gfac.GfacAPI.gridJobSubmit(GfacAPI.java:140)
at
org.apache.airavata.xbaya.invoker.EmbeddedGFacInvoker.invoke(EmbeddedGFacInvoker.java:256)
... 7 more
Caused by: org.globus.gram.GramException: The connection to the server
failed (check host and port) [Caused by: Connection refused]
at org.globus.gram.Gram.renew(Gram.java:595)
at org.globus.gram.GramJob.renew(GramJob.java:329)
at org.globus.gram.GramJob.renew(GramJob.java:315)
at
org.apache.airavata.core.gfac.provider.utils.JobSubmissionListener.waitFor(JobSubmissionListener.java:72)
at
org.apache.airavata.core.gfac.provider.impl.GramProvider.executeApplication(GramProvider.java:206)
... 11 more

[WARN] User : admin Failed login attempt to system at 2013-02-01 17:06:25
Feb 1, 2013 5:06:25 PM com.sun.jersey.spi.container.servlet.WebComponent
filterFormParameters

===================================================================

Is there any work around to avoid this error message?

Thank you,

Pedro da Silveira

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