airavata-dev mailing list archives

Site index · List index
Message view « Date » · « Thread »
Top « Date » · « Thread »
From Pedro da Silveira <pedro...@gmail.com>
Subject Submit task to Lonestar using my Xsede account instead of using ogce
Date Wed, 06 Feb 2013 00:49:36 GMT
Hi Dev,

I am trying to submit a workflow using my Xsede account using Xbaya. It has
worked successfully using "ogce" account.
I changed the file "airavata-server.properties" to use my Xsede portal
account.

myproxy.user=pedrorcs
myproxy.pass=******

I also changed the Application Service to use a different settings like my
user $SCRATCH directory.

Executable path:
/scratch/00091/tg458470/executePwscf.sh

Scratch Working directory:
/scratch/00091/tg458470/Phonon

I set the workflow to run then I setup correctly the local path to input
files on my desktop.
All input files got transferred correctly, but the job were never not
submitted to PBS.
Can someone please clarify if I am doing something wrong?

This is the log on Airavata-Server:

=================================================================================================================
[INFO] Experiment launched
:SimplePhonon_01a4d374-486f-4948-937f-a9de4b2b45eb
[INFO] -----DATA-----
[INFO] Start scheduling
[INFO] -----END DATA-----
[INFO] Searching registry for some deployed application hosts
[INFO] Found service on: lonestar4.tacc.teragrid.org
[INFO] Found service on: lonestar4.tacc.teragrid.org
[INFO] -----DATA-----
[INFO] Finish scheduling
[INFO] -----END DATA-----
null
[INFO] Proxy file renewed to
/tmp/x509up_upedrorcsed4c4290-90e6-40a6-bfe7-3c5239da1b7c for the user
pedrorcs with 3600 lifetime.
[INFO] Creating Directory = gridftp1.ls4.tacc.utexas.edu:2811
=//scratch/00091/tg458470/Phonon
[INFO] Creating Directory = gridftp1.ls4.tacc.utexas.edu:2811
=//scratch/00091/tg458470/Phonon/AppSimplePhonon_Tue_Feb_05_18_30_22_CST_2013_7a7dded8-e058-4be2-ad43-cacf77b3138d
[INFO] Creating Directory = gridftp1.ls4.tacc.utexas.edu:2811
=//scratch/00091/tg458470/Phonon/AppSimplePhonon_Tue_Feb_05_18_30_22_CST_2013_7a7dded8-e058-4be2-ad43-cacf77b3138d/inputData
[INFO] Creating Directory = gridftp1.ls4.tacc.utexas.edu:2811
=//scratch/00091/tg458470/Phonon/AppSimplePhonon_Tue_Feb_05_18_30_22_CST_2013_7a7dded8-e058-4be2-ad43-cacf77b3138d/outputData
org.globus.gsi.gssapi.GlobusGSSCredentialImpl@2161df1f
[INFO] The remote file is
///scratch/00091/tg458470/Phonon/AppSimplePhonon_Tue_Feb_05_18_30_22_CST_2013_7a7dded8-e058-4be2-ad43-cacf77b3138d/inputData/Pwscf_Input
[INFO] Uploading file
[INFO] Upload file
to:///scratch/00091/tg458470/Phonon/AppSimplePhonon_Tue_Feb_05_18_30_22_CST_2013_7a7dded8-e058-4be2-ad43-cacf77b3138d/inputData/Pwscf_Input
is done
org.globus.gsi.gssapi.GlobusGSSCredentialImpl@2161df1f
[INFO] The remote file is
///scratch/00091/tg458470/Phonon/AppSimplePhonon_Tue_Feb_05_18_30_22_CST_2013_7a7dded8-e058-4be2-ad43-cacf77b3138d/inputData/Mg.vbc3
[INFO] Uploading file
[INFO] Upload file
to:///scratch/00091/tg458470/Phonon/AppSimplePhonon_Tue_Feb_05_18_30_22_CST_2013_7a7dded8-e058-4be2-ad43-cacf77b3138d/inputData/Mg.vbc3
is done
org.globus.gsi.gssapi.GlobusGSSCredentialImpl@2161df1f
[INFO] The remote file is
///scratch/00091/tg458470/Phonon/AppSimplePhonon_Tue_Feb_05_18_30_22_CST_2013_7a7dded8-e058-4be2-ad43-cacf77b3138d/inputData/008Ocabm3.vdb
[INFO] Uploading file
[INFO] Upload file
to:///scratch/00091/tg458470/Phonon/AppSimplePhonon_Tue_Feb_05_18_30_22_CST_2013_7a7dded8-e058-4be2-ad43-cacf77b3138d/inputData/008Ocabm3.vdb
is done
[INFO] -----DATA-----
[INFO] Start execution
[INFO] -----END DATA-----
org.globus.gsi.gssapi.GlobusGSSCredentialImpl@2161df1f
[INFO] -----DATA-----
[INFO] Finished launching job, Host = lonestar4.tacc.teragrid.org RSL = &(
queue = "development" )( stdout =
"/scratch/00091/tg458470/Phonon/AppSimplePhonon_Tue_Feb_05_18_30_22_CST_2013_7a7dded8-e058-4be2-ad43-cacf77b3138d/lonestar_application.stdout"
)( count = "12" )( executable = "/scratch/00091/tg458470/executePwscf.sh"
)( stderr =
"/scratch/00091/tg458470/Phonon/AppSimplePhonon_Tue_Feb_05_18_30_22_CST_2013_7a7dded8-e058-4be2-ad43-cacf77b3138d/lonestar_application.stderr"
)( maxwalltime = "20" )( hostCount = "1" )( minmemory = "1024" )( project =
"TG-TRA120030" )( jobtype = "mpi" )( environment = ( "inputData"
"/scratch/00091/tg458470/Phonon/AppSimplePhonon_Tue_Feb_05_18_30_22_CST_2013_7a7dded8-e058-4be2-ad43-cacf77b3138d/inputData"
) ( "outputData"
"/scratch/00091/tg458470/Phonon/AppSimplePhonon_Tue_Feb_05_18_30_22_CST_2013_7a7dded8-e058-4be2-ad43-cacf77b3138d/outputData"
) )( proxy_timeout = "1" )( arguments =
"///scratch/00091/tg458470/Phonon/AppSimplePhonon_Tue_Feb_05_18_30_22_CST_2013_7a7dded8-e058-4be2-ad43-cacf77b3138d/inputData/Pwscf_Input"
"///scratch/00091/tg458470/Phonon/AppSimplePhonon_Tue_Feb_05_18_30_22_CST_2013_7a7dded8-e058-4be2-ad43-cacf77b3138d/inputData/Mg.vbc3"
"///scratch/00091/tg458470/Phonon/AppSimplePhonon_Tue_Feb_05_18_30_22_CST_2013_7a7dded8-e058-4be2-ad43-cacf77b3138d/inputData/008Ocabm3.vdb"
)( directory =
"/scratch/00091/tg458470/Phonon/AppSimplePhonon_Tue_Feb_05_18_30_22_CST_2013_7a7dded8-e058-4be2-ad43-cacf77b3138d"
)( maxmemory = "2048" ) working directory =
/scratch/00091/tg458470/Phonon/AppSimplePhonon_Tue_Feb_05_18_30_22_CST_2013_7a7dded8-e058-4be2-ad43-cacf77b3138d
temp directory = /scratch/00091/tg458470/Phonon Globus GateKeeper Endpoint
= gridftp1.ls4.tacc.utexas.edu:2119/jobmanager-sge
[INFO] -----END DATA-----
=================================================================================================================


Thank you so much,


Pedro da Silveira

Mime
  • Unnamed multipart/alternative (inline, None, 0 bytes)
View raw message