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From sma...@apache.org
Subject [airavata-sandbox] 04/05: Revert "Added entities, repositories, utils and updated pom file"
Date Fri, 17 Nov 2017 23:57:36 GMT
This is an automated email from the ASF dual-hosted git repository.

smarru pushed a commit to branch master
in repository https://gitbox.apache.org/repos/asf/airavata-sandbox.git

commit 676140dfcaaea634d03d33828cfa4daaa029f261
Author: Harsha Phulwani <harshaphulwani16@gmail.com>
AuthorDate: Fri Nov 17 18:30:32 2017 -0500

    Revert "Added entities,repositories,utils and updated pom file"
    
    This reverts commit 9859fd79e659db94e86489cdb2611e84a3c398c4.
---
 .gitignore                                         |  30 +-
 .../airavata-allocation-manager-server/pom.xml     |  64 +---
 .../manager/db/entities/DomainEntity.java          | 116 -------
 .../manager/db/entities/RequestStatusEntity.java   |  78 -----
 .../db/entities/UserAllocationDetailEntity.java    | 205 -----------
 .../db/entities/UserAllocationDetailEntityPK.java  |  57 ---
 .../manager/db/entities/UserDetailEntity.java      |  78 -----
 .../db/repositories/AbstractRepository.java        | 163 ---------
 .../manager/db/repositories/DomainRepository.java  |  33 --
 .../db/repositories/RequestStatusRepository.java   |  14 -
 .../UserAllocationDetailPKRepository.java          |  14 -
 .../UserAllocationDetailRepository.java            |  14 -
 .../db/repositories/UserDetailRepository.java      |  19 -
 .../allocation/manager/db/utils/Committer.java     |  26 --
 .../manager/db/utils/ConnectionPool.java           | 381 ---------------------
 .../allocation/manager/db/utils/DBConstants.java   | 106 ------
 .../manager/db/utils/DatabaseCreator.java          | 352 -------------------
 .../allocation/manager/db/utils/JPAUtils.java      | 215 ------------
 .../allocation/manager/db/utils/JdbcStorage.java   | 174 ----------
 .../manager/db/utils/ObjectMapperSingleton.java    |  38 --
 .../airavata/allocation/manager/models/Domain.java |   5 -
 bin/README.txt                                     |  16 -
 bin/build.xml                                      |  53 ---
 bin/db.config                                      |  24 --
 .../airavata/jobsubmission/gram/errors.properties  | 176 ----------
 25 files changed, 27 insertions(+), 2424 deletions(-)

diff --git a/.gitignore b/.gitignore
index db19882..d6e588b 100644
--- a/.gitignore
+++ b/.gitignore
@@ -1,11 +1,5 @@
-# Compiled class file
 *.class
-
-# Log file
-*.log
-
-# BlueJ files
-*.ctxt
+*id_rsa*
 
 # Mobile Tools for Java (J2ME)
 .mtj.tmp/
@@ -14,18 +8,18 @@
 *.jar
 *.war
 *.ear
-*.zip
-*.tar.gz
-*.rar
 
-# virtual machine crash logs, see http://www.java.com/en/download/help/error_hotspot.xml
-hs_err_pid*
 
-# Ignore files ending with target
-*target/
-
-# Ignore files starting with dot
-.*
-!.gitignore
+target/
+.idea/
+tmp/
+logs/
+gaussian_sample/
+*.ser
+*.iml
+*.gen
 
+# virtual machine crash logs, see http://www.java.com/en/download/help/error_hotspot.xml
+hs_err_pid*
+solr-server/logs/solr.log
 
diff --git a/allocation-manager/airavata-allocation-manager/airavata-allocation-manager-server/pom.xml b/allocation-manager/airavata-allocation-manager/airavata-allocation-manager-server/pom.xml
index 8cb41b4..86dd4fc 100644
--- a/allocation-manager/airavata-allocation-manager/airavata-allocation-manager-server/pom.xml
+++ b/allocation-manager/airavata-allocation-manager/airavata-allocation-manager-server/pom.xml
@@ -1,55 +1,21 @@
-<project xmlns="http://maven.apache.org/POM/4.0.0" xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance"
-	xsi:schemaLocation="http://maven.apache.org/POM/4.0.0 http://maven.apache.org/xsd/maven-4.0.0.xsd">
-	<modelVersion>4.0.0</modelVersion>
-	<parent>
-		<groupId>org.apache.airavata</groupId>
-		<artifactId>airavata-allocation-manager</artifactId>
-		<version>0.0.1-SNAPSHOT</version>
-	</parent>
-	<artifactId>airavata-allocation-manager-server</artifactId>
-	<dependencies>
-		<dependency>
-			<groupId>org.apache.airavata</groupId>
-			<artifactId>airavata-allocation-manager-stubs</artifactId>
-			<version>0.0.1-SNAPSHOT</version>
-		</dependency>
-		<dependency>
-			<groupId>org.slf4j</groupId>
-			<artifactId>slf4j-api</artifactId>
-			<version>1.7.10</version>
-		</dependency>
-		<dependency>
-			<groupId>net.sf.dozer</groupId>
-			<artifactId>dozer</artifactId>
-			<version>5.4.0</version>
-			<exclusions>
-				<exclusion>
-					<groupId>org.slf4j</groupId>
-					<artifactId>slf4j-log4j12</artifactId>
-				</exclusion>
-			</exclusions>
-		</dependency>
-		<dependency>
-			<groupId>org.apache.openjpa</groupId>
-			<artifactId>openjpa-all</artifactId>
-			<version>2.2.0</version>
-		</dependency>
-		<!-- https://mvnrepository.com/artifact/mysql/mysql-connector-java -->
-		<dependency>
-			<groupId>mysql</groupId>
-			<artifactId>mysql-connector-java</artifactId>
-			<version>5.1.34</version>
-		</dependency>
-		<!-- https://mvnrepository.com/artifact/org.apache.thrift/libthrift -->
+<project xmlns="http://maven.apache.org/POM/4.0.0" xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:schemaLocation="http://maven.apache.org/POM/4.0.0 http://maven.apache.org/xsd/maven-4.0.0.xsd">
+  <modelVersion>4.0.0</modelVersion>
+  <parent>
+    <groupId>org.apache.airavata</groupId>
+    <artifactId>airavata-allocation-manager</artifactId>
+    <version>0.0.1-SNAPSHOT</version>
+  </parent>
+  <artifactId>airavata-allocation-manager-server</artifactId>
+  <dependencies>
 		<dependency>
 			<groupId>org.apache.thrift</groupId>
 			<artifactId>libthrift</artifactId>
 			<version>0.10.0</version>
-			<type>pom</type>
+		</dependency>
+		<dependency>
+			<groupId>org.apache.airavata</groupId>
+			<artifactId>airavata-allocation-manager-stubs</artifactId>
+			<version>0.0.1-SNAPSHOT</version>
 		</dependency>
 	</dependencies>
-	<properties>
-		<maven.compiler.source>1.8</maven.compiler.source>
-		<maven.compiler.target>1.8</maven.compiler.target>
-	</properties>
-</project> 
\ No newline at end of file
+</project>
\ No newline at end of file
diff --git a/allocation-manager/airavata-allocation-manager/airavata-allocation-manager-server/src/main/java/org/apache/airavata/allocation/manager/db/entities/DomainEntity.java b/allocation-manager/airavata-allocation-manager/airavata-allocation-manager-server/src/main/java/org/apache/airavata/allocation/manager/db/entities/DomainEntity.java
deleted file mode 100644
index 2aed6f9..0000000
--- a/allocation-manager/airavata-allocation-manager/airavata-allocation-manager-server/src/main/java/org/apache/airavata/allocation/manager/db/entities/DomainEntity.java
+++ /dev/null
@@ -1,116 +0,0 @@
-/**
- *
- * Licensed to the Apache Software Foundation (ASF) under one
- * or more contributor license agreements.  See the NOTICE file
- * distributed with this work for additional information
- * regarding copyright ownership.  The ASF licenses this file
- * to you under the Apache License, Version 2.0 (the
- * "License"); you may not use this file except in compliance
- * with the License.  You may obtain a copy of the License at
- *
- *   http://www.apache.org/licenses/LICENSE-2.0
- *
- * Unless required by applicable law or agreed to in writing,
- * software distributed under the License is distributed on an
- * "AS IS" BASIS, WITHOUT WARRANTIES OR CONDITIONS OF ANY
- * KIND, either express or implied.  See the License for the
- * specific language governing permissions and limitations
- * under the License.
- */
-package org.apache.airavata.allocation.manager.db.entities;
-
-import org.slf4j.Logger;
-import org.slf4j.LoggerFactory;
-
-import javax.persistence.*;
-
-@Entity
-@Table(name = "DOMAIN", schema = "" )
-public class DomainEntity {
-    private final static Logger logger = LoggerFactory.getLogger(DomainEntity.class);
-    private String domainId;
-    private String name;
-    private String description;
-    private Long createdTime;
-    private Long updatedTime;
-
-    @Id
-    @Column(name = "DOMAIN_ID")
-    public String getDomainId() {
-        return domainId;
-    }
-
-    public void setDomainId(String domainId) {
-        this.domainId = domainId;
-    }
-
-    @Basic
-    @Column(name = "NAME")
-    public String getName() {
-        return name;
-    }
-
-    public void setName(String name) {
-        this.name = name;
-    }
-
-    @Basic
-    @Column(name = "DESCRIPTION")
-    public String getDescription() {
-        return description;
-    }
-
-    public void setDescription(String description) {
-        this.description = description;
-    }
-
-    @Basic
-    @Column(name = "CREATED_TIME")
-    public Long getCreatedTime() {
-        return createdTime;
-    }
-
-    public void setCreatedTime(Long createdTime) {
-        this.createdTime = createdTime;
-    }
-
-    @Basic
-    @Column(name = "UPDATED_TIME")
-    public Long getUpdatedTime() {
-        return updatedTime;
-    }
-
-    public void setUpdatedTime(Long updatedTime) {
-        this.updatedTime = updatedTime;
-    }
-
-    @Override
-    public boolean equals(Object o) {
-        if (this == o) return true;
-        if (o == null || getClass() != o.getClass()) return false;
-
-        DomainEntity that = (DomainEntity) o;
-
-        if (getDomainId() != null ? !getDomainId().equals(that.getDomainId()) : that.getDomainId() != null)
-            return false;
-        if (getName() != null ? !getName().equals(that.getName()) : that.getName() != null) return false;
-        if (getDescription() != null ? !getDescription().equals(that.getDescription()) : that.getDescription() != null)
-            return false;
-        if (getCreatedTime() != null ? !getCreatedTime().equals(that.getCreatedTime()) : that.getCreatedTime() != null)
-            return false;
-        if (getUpdatedTime() != null ? !getUpdatedTime().equals(that.getUpdatedTime()) : that.getUpdatedTime() != null)
-            return false;
-
-        return true;
-    }
-
-    @Override
-    public int hashCode() {
-        int result = getDomainId() != null ? getDomainId().hashCode() : 0;
-        result = 31 * result + (getName() != null ? getName().hashCode() : 0);
-        result = 31 * result + (getDescription() != null ? getDescription().hashCode() : 0);
-        result = 31 * result + (getCreatedTime() != null ? getCreatedTime().hashCode() : 0);
-        result = 31 * result + (getUpdatedTime() != null ? getUpdatedTime().hashCode() : 0);
-        return result;
-    }
-}
\ No newline at end of file
diff --git a/allocation-manager/airavata-allocation-manager/airavata-allocation-manager-server/src/main/java/org/apache/airavata/allocation/manager/db/entities/RequestStatusEntity.java b/allocation-manager/airavata-allocation-manager/airavata-allocation-manager-server/src/main/java/org/apache/airavata/allocation/manager/db/entities/RequestStatusEntity.java
deleted file mode 100644
index 42ccc4a..0000000
--- a/allocation-manager/airavata-allocation-manager/airavata-allocation-manager-server/src/main/java/org/apache/airavata/allocation/manager/db/entities/RequestStatusEntity.java
+++ /dev/null
@@ -1,78 +0,0 @@
-package org.apache.airavata.allocation.manager.db.entities;
-
-import java.io.Serializable;
-import javax.persistence.*;
-import java.math.BigInteger;
-
-
-/**
- * The persistent class for the REQUEST_STATUS database table.
- * 
- */
-@Entity
-@Table(name="REQUEST_STATUS")
-@NamedQuery(name="RequestStatusEntity.findAll", query="SELECT r FROM RequestStatusEntity r")
-public class RequestStatusEntity implements Serializable {
-	private static final long serialVersionUID = 1L;
-
-	@Id
-	@Column(name="PROJECT_ID")
-	private String projectId;
-
-	@Column(name="END_DATE")
-	private BigInteger endDate;
-
-	@Lob
-	@Column(name="REVIEWERS")
-	private String reviewers;
-
-	@Column(name="START_DATE")
-	private BigInteger startDate;
-
-	@Column(name="STATUS")
-	private String status;
-
-	public RequestStatusEntity() {
-	}
-
-	public String getProjectId() {
-		return this.projectId;
-	}
-
-	public void setProjectId(String projectId) {
-		this.projectId = projectId;
-	}
-
-	public BigInteger getEndDate() {
-		return this.endDate;
-	}
-
-	public void setEndDate(BigInteger endDate) {
-		this.endDate = endDate;
-	}
-
-	public String getReviewers() {
-		return this.reviewers;
-	}
-
-	public void setReviewers(String reviewers) {
-		this.reviewers = reviewers;
-	}
-
-	public BigInteger getStartDate() {
-		return this.startDate;
-	}
-
-	public void setStartDate(BigInteger startDate) {
-		this.startDate = startDate;
-	}
-
-	public String getStatus() {
-		return this.status;
-	}
-
-	public void setStatus(String status) {
-		this.status = status;
-	}
-
-}
\ No newline at end of file
diff --git a/allocation-manager/airavata-allocation-manager/airavata-allocation-manager-server/src/main/java/org/apache/airavata/allocation/manager/db/entities/UserAllocationDetailEntity.java b/allocation-manager/airavata-allocation-manager/airavata-allocation-manager-server/src/main/java/org/apache/airavata/allocation/manager/db/entities/UserAllocationDetailEntity.java
deleted file mode 100644
index 35ab18d..0000000
--- a/allocation-manager/airavata-allocation-manager/airavata-allocation-manager-server/src/main/java/org/apache/airavata/allocation/manager/db/entities/UserAllocationDetailEntity.java
+++ /dev/null
@@ -1,205 +0,0 @@
-package org.apache.airavata.allocation.manager.db.entities;
-
-import java.io.Serializable;
-import javax.persistence.*;
-import java.math.BigInteger;
-
-
-/**
- * The persistent class for the USER_ALLOCATION_DETAILS database table.
- * 
- */
-@Entity
-@Table(name="USER_ALLOCATION_DETAILS")
-@NamedQuery(name="UserAllocationDetailEntity.findAll", query="SELECT u FROM UserAllocationDetailEntity u")
-public class UserAllocationDetailEntity implements Serializable {
-	private static final long serialVersionUID = 1L;
-
-	@EmbeddedId
-	private UserAllocationDetailEntityPK id;
-
-	@Lob
-	@Column(name="APPLICATIONS_TO_BE_USED")
-	private String applicationsToBeUsed;
-
-	@Column(name="DISK_USAGE_RANGE_PER_JOB")
-	private BigInteger diskUsageRangePerJob;
-
-	@Lob
-	@Column(name="DOCUMENTS")
-	private byte[] documents;
-
-	@Lob
-	@Column(name="FIELD_OF_SCIENCE")
-	private String fieldOfScience;
-
-	@Lob
-	@Column(name="KEYWORDS")
-	private String keywords;
-
-	@Column(name="MAX_MEMORY_PER_CPU")
-	private BigInteger maxMemoryPerCpu;
-
-	@Column(name="NUMBER_OF_CPU_PER_JOB")
-	private BigInteger numberOfCpuPerJob;
-
-	@Lob
-	@Column(name="PROJECT_DESCRIPTION")
-	private String projectDescription;
-
-	@Lob
-	@Column(name="PROJECT_REVIEWED_AND_FUNDED_BY")
-	private String projectReviewedAndFundedBy;
-
-	@Column(name="REQ_DATE")
-	private BigInteger reqDate;
-
-	@Column(name="SERVICE_UNITS")
-	private BigInteger serviceUnits;
-
-	@Lob
-	@Column(name="SPECIFIC_RESOURCE_SELECTION")
-	private String specificResourceSelection;
-
-	@Lob
-	@Column(name="TITLE")
-	private String title;
-
-	@Column(name="TYPE_OF_ALLOCATION")
-	private String typeOfAllocation;
-
-	@Column(name="TYPICAL_SU_PER_JOB")
-	private BigInteger typicalSuPerJob;
-
-	public UserAllocationDetailEntity() {
-	}
-
-	public UserAllocationDetailEntityPK getId() {
-		return this.id;
-	}
-
-	public void setId(UserAllocationDetailEntityPK id) {
-		this.id = id;
-	}
-
-	public String getApplicationsToBeUsed() {
-		return this.applicationsToBeUsed;
-	}
-
-	public void setApplicationsToBeUsed(String applicationsToBeUsed) {
-		this.applicationsToBeUsed = applicationsToBeUsed;
-	}
-
-	public BigInteger getDiskUsageRangePerJob() {
-		return this.diskUsageRangePerJob;
-	}
-
-	public void setDiskUsageRangePerJob(BigInteger diskUsageRangePerJob) {
-		this.diskUsageRangePerJob = diskUsageRangePerJob;
-	}
-
-	public byte[] getDocuments() {
-		return this.documents;
-	}
-
-	public void setDocuments(byte[] documents) {
-		this.documents = documents;
-	}
-
-	public String getFieldOfScience() {
-		return this.fieldOfScience;
-	}
-
-	public void setFieldOfScience(String fieldOfScience) {
-		this.fieldOfScience = fieldOfScience;
-	}
-
-	public String getKeywords() {
-		return this.keywords;
-	}
-
-	public void setKeywords(String keywords) {
-		this.keywords = keywords;
-	}
-
-	public BigInteger getMaxMemoryPerCpu() {
-		return this.maxMemoryPerCpu;
-	}
-
-	public void setMaxMemoryPerCpu(BigInteger maxMemoryPerCpu) {
-		this.maxMemoryPerCpu = maxMemoryPerCpu;
-	}
-
-	public BigInteger getNumberOfCpuPerJob() {
-		return this.numberOfCpuPerJob;
-	}
-
-	public void setNumberOfCpuPerJob(BigInteger numberOfCpuPerJob) {
-		this.numberOfCpuPerJob = numberOfCpuPerJob;
-	}
-
-	public String getProjectDescription() {
-		return this.projectDescription;
-	}
-
-	public void setProjectDescription(String projectDescription) {
-		this.projectDescription = projectDescription;
-	}
-
-	public String getProjectReviewedAndFundedBy() {
-		return this.projectReviewedAndFundedBy;
-	}
-
-	public void setProjectReviewedAndFundedBy(String projectReviewedAndFundedBy) {
-		this.projectReviewedAndFundedBy = projectReviewedAndFundedBy;
-	}
-
-	public BigInteger getReqDate() {
-		return this.reqDate;
-	}
-
-	public void setReqDate(BigInteger reqDate) {
-		this.reqDate = reqDate;
-	}
-
-	public BigInteger getServiceUnits() {
-		return this.serviceUnits;
-	}
-
-	public void setServiceUnits(BigInteger serviceUnits) {
-		this.serviceUnits = serviceUnits;
-	}
-
-	public String getSpecificResourceSelection() {
-		return this.specificResourceSelection;
-	}
-
-	public void setSpecificResourceSelection(String specificResourceSelection) {
-		this.specificResourceSelection = specificResourceSelection;
-	}
-
-	public String getTitle() {
-		return this.title;
-	}
-
-	public void setTitle(String title) {
-		this.title = title;
-	}
-
-	public String getTypeOfAllocation() {
-		return this.typeOfAllocation;
-	}
-
-	public void setTypeOfAllocation(String typeOfAllocation) {
-		this.typeOfAllocation = typeOfAllocation;
-	}
-
-	public BigInteger getTypicalSuPerJob() {
-		return this.typicalSuPerJob;
-	}
-
-	public void setTypicalSuPerJob(BigInteger typicalSuPerJob) {
-		this.typicalSuPerJob = typicalSuPerJob;
-	}
-
-}
\ No newline at end of file
diff --git a/allocation-manager/airavata-allocation-manager/airavata-allocation-manager-server/src/main/java/org/apache/airavata/allocation/manager/db/entities/UserAllocationDetailEntityPK.java b/allocation-manager/airavata-allocation-manager/airavata-allocation-manager-server/src/main/java/org/apache/airavata/allocation/manager/db/entities/UserAllocationDetailEntityPK.java
deleted file mode 100644
index e768883..0000000
--- a/allocation-manager/airavata-allocation-manager/airavata-allocation-manager-server/src/main/java/org/apache/airavata/allocation/manager/db/entities/UserAllocationDetailEntityPK.java
+++ /dev/null
@@ -1,57 +0,0 @@
-package org.apache.airavata.allocation.manager.db.entities;
-
-import java.io.Serializable;
-import javax.persistence.*;
-
-/**
- * The primary key class for the USER_ALLOCATION_DETAILS database table.
- * 
- */
-@Embeddable
-public class UserAllocationDetailEntityPK implements Serializable {
-	//default serial version id, required for serializable classes.
-	private static final long serialVersionUID = 1L;
-
-	@Column(name="PROJECT_ID")
-	private String projectId;
-
-	@Column(name="USERNAME")
-	private String username;
-
-	public UserAllocationDetailEntityPK() {
-	}
-	public String getProjectId() {
-		return this.projectId;
-	}
-	public void setProjectId(String projectId) {
-		this.projectId = projectId;
-	}
-	public String getUsername() {
-		return this.username;
-	}
-	public void setUsername(String username) {
-		this.username = username;
-	}
-
-	public boolean equals(Object other) {
-		if (this == other) {
-			return true;
-		}
-		if (!(other instanceof UserAllocationDetailEntityPK)) {
-			return false;
-		}
-		UserAllocationDetailEntityPK castOther = (UserAllocationDetailEntityPK)other;
-		return 
-			this.projectId.equals(castOther.projectId)
-			&& this.username.equals(castOther.username);
-	}
-
-	public int hashCode() {
-		final int prime = 31;
-		int hash = 17;
-		hash = hash * prime + this.projectId.hashCode();
-		hash = hash * prime + this.username.hashCode();
-		
-		return hash;
-	}
-}
\ No newline at end of file
diff --git a/allocation-manager/airavata-allocation-manager/airavata-allocation-manager-server/src/main/java/org/apache/airavata/allocation/manager/db/entities/UserDetailEntity.java b/allocation-manager/airavata-allocation-manager/airavata-allocation-manager-server/src/main/java/org/apache/airavata/allocation/manager/db/entities/UserDetailEntity.java
deleted file mode 100644
index 9eb04fc..0000000
--- a/allocation-manager/airavata-allocation-manager/airavata-allocation-manager-server/src/main/java/org/apache/airavata/allocation/manager/db/entities/UserDetailEntity.java
+++ /dev/null
@@ -1,78 +0,0 @@
-package org.apache.airavata.allocation.manager.db.entities;
-
-import java.io.Serializable;
-import javax.persistence.*;
-
-
-/**
- * The persistent class for the USER_DETAILS database table.
- * 
- */
-@Entity
-@Table(name="USER_DETAILS")
-@NamedQuery(name="UserDetailEntity.findAll", query="SELECT u FROM UserDetailEntity u")
-public class UserDetailEntity implements Serializable {
-	private static final long serialVersionUID = 1L;
-
-	@Id
-	@Column(name="USERNAME")
-	private String username;
-
-	@Lob
-	@Column(name="EMAIL")
-	private String email;
-
-	@Lob
-	@Column(name="FULL_NAME")
-	private String fullName;
-
-	@Column(name="PASSWORD")
-	private String password;
-
-	@Column(name="USER_TYPE")
-	private String userType;
-
-	public UserDetailEntity() {
-	}
-
-	public String getUsername() {
-		return this.username;
-	}
-
-	public void setUsername(String username) {
-		this.username = username;
-	}
-
-	public String getEmail() {
-		return this.email;
-	}
-
-	public void setEmail(String email) {
-		this.email = email;
-	}
-
-	public String getFullName() {
-		return this.fullName;
-	}
-
-	public void setFullName(String fullName) {
-		this.fullName = fullName;
-	}
-
-	public String getPassword() {
-		return this.password;
-	}
-
-	public void setPassword(String password) {
-		this.password = password;
-	}
-
-	public String getUserType() {
-		return this.userType;
-	}
-
-	public void setUserType(String userType) {
-		this.userType = userType;
-	}
-
-}
\ No newline at end of file
diff --git a/allocation-manager/airavata-allocation-manager/airavata-allocation-manager-server/src/main/java/org/apache/airavata/allocation/manager/db/repositories/AbstractRepository.java b/allocation-manager/airavata-allocation-manager/airavata-allocation-manager-server/src/main/java/org/apache/airavata/allocation/manager/db/repositories/AbstractRepository.java
deleted file mode 100644
index 6449b4a..0000000
--- a/allocation-manager/airavata-allocation-manager/airavata-allocation-manager-server/src/main/java/org/apache/airavata/allocation/manager/db/repositories/AbstractRepository.java
+++ /dev/null
@@ -1,163 +0,0 @@
-/**
- *
- * Licensed to the Apache Software Foundation (ASF) under one
- * or more contributor license agreements.  See the NOTICE file
- * distributed with this work for additional information
- * regarding copyright ownership.  The ASF licenses this file
- * to you under the Apache License, Version 2.0 (the
- * "License"); you may not use this file except in compliance
- * with the License.  You may obtain a copy of the License at
- *
- *   http://www.apache.org/licenses/LICENSE-2.0
- *
- * Unless required by applicable law or agreed to in writing,
- * software distributed under the License is distributed on an
- * "AS IS" BASIS, WITHOUT WARRANTIES OR CONDITIONS OF ANY
- * KIND, either express or implied.  See the License for the
- * specific language governing permissions and limitations
- * under the License.
- */
-package org.apache.airavata.allocation.manager.db.repositories;
-
-import org.apache.airavata.allocation.manager.db.utils.Committer;
-import org.apache.airavata.allocation.manager.db.utils.DBConstants;
-import org.apache.airavata.allocation.manager.db.utils.JPAUtils;
-import org.apache.airavata.allocation.manager.db.utils.ObjectMapperSingleton;
-import org.apache.airavata.allocation.manager.models.AllocationManagerException;
-import org.dozer.Mapper;
-import org.slf4j.Logger;
-import org.slf4j.LoggerFactory;
-
-import javax.persistence.EntityManager;
-import javax.persistence.Query;
-import java.util.ArrayList;
-import java.util.List;
-import java.util.Map;
-
-public abstract class AbstractRepository<T, E, Id> {
-    private final static Logger logger = LoggerFactory.getLogger(AbstractRepository.class);
-
-    private Class<T> thriftGenericClass;
-    private Class<E> dbEntityGenericClass;
-
-    public AbstractRepository(Class<T> thriftGenericClass, Class<E> dbEntityGenericClass){
-        this.thriftGenericClass = thriftGenericClass;
-        this.dbEntityGenericClass = dbEntityGenericClass;
-    }
-
-    public T create(T t) throws Exception {
-        return update(t);
-    }
-
-    //FIXME do a bulk insert
-    public List<T> create(List<T> tList) throws Exception {
-        return update(tList);
-    }
-
-    public  T update(T t) throws Exception {
-        Mapper mapper = ObjectMapperSingleton.getInstance();
-        E entity = mapper.map(t, dbEntityGenericClass);
-        E persistedCopy = execute(entityManager -> entityManager.merge(entity));
-        return mapper.map(persistedCopy, thriftGenericClass);
-    }
-
-    //FIXME do a bulk update
-    public  List<T> update(List<T> tList) throws Exception {
-        List<T> returnList = new ArrayList<T>();
-        for(T temp : tList)
-            returnList.add(update(temp));
-        return returnList;
-    }
-
-    public boolean delete(Id id) throws Exception {
-        execute(entityManager -> {
-             E entity = entityManager.find(dbEntityGenericClass, id);
-             entityManager.remove(entity);
-             return entity;
-         });
-        return true;
-    }
-
-    public boolean delete(List<Id> idList) throws Exception {
-        for(Id id : idList)
-            delete(id);
-        return true;
-    }
-
-    public T get(Id id) throws Exception {
-        E entity = execute(entityManager -> entityManager
-                .find(dbEntityGenericClass, id));
-        Mapper mapper = ObjectMapperSingleton.getInstance();
-        if(entity == null)
-            return null;
-        return mapper.map(entity, thriftGenericClass);
-    }
-
-    public boolean isExists(Id id) throws Exception {
-        return get(id) != null;
-    }
-
-    public List<T> get(List<Id> idList) throws Exception {
-        List<T> returnList = new ArrayList<>();
-        for(Id id : idList)
-            returnList.add(get(id));
-        return returnList;
-    }
-
-    public List<T> select(Map<String, String> filters, int offset, int limit) throws Exception {
-        String query = "SELECT DISTINCT p from " + dbEntityGenericClass.getSimpleName() + " as p";
-        ArrayList<String> parameters = new ArrayList<>();
-        int parameterCount = 1;
-        if (filters != null && filters.size() != 0) {
-            query += " WHERE ";
-            for (String k : filters.keySet()) {
-                query += "p." + k + " = ?" + parameterCount + " AND ";
-                parameters.add(filters.get(k));
-                parameterCount++;
-            }
-            query = query.substring(0, query.length() - 5);
-        }
-
-        query += " ORDER BY p.createdTime DESC";
-        String queryString = query;
-        int newLimit = limit < 0 ? DBConstants.SELECT_MAX_ROWS: limit;
-        List resultSet = execute(entityManager -> {
-            javax.persistence.Query q = entityManager.createQuery(queryString);
-            for (int i = 0; i < parameters.size(); i++) {
-                q.setParameter(i + 1, parameters.get(i));
-            }
-            return q.setFirstResult(offset).setMaxResults(newLimit).getResultList();
-        });
-        Mapper mapper = ObjectMapperSingleton.getInstance();
-        List<T> gatewayList = new ArrayList<>();
-        resultSet.stream().forEach(rs -> gatewayList.add(mapper.map(rs, thriftGenericClass)));
-        return gatewayList;
-    }
-
-    public List<T> select(String queryString, Map<String,Object> queryParameters, int offset, int limit) throws Exception {
-        int newLimit = limit < 0 ? DBConstants.SELECT_MAX_ROWS: limit;
-        List resultSet = execute(entityManager -> {
-            Query q =  entityManager.createQuery(queryString);
-            for(Map.Entry<String, Object> queryParam : queryParameters.entrySet()){
-                q.setParameter(queryParam.getKey(), queryParam.getValue());
-            }
-            return q.setFirstResult(offset).setMaxResults(newLimit).getResultList();
-        });
-        Mapper mapper = ObjectMapperSingleton.getInstance();
-        List<T> gatewayList = new ArrayList<>();
-        resultSet.stream().forEach(rs -> gatewayList.add(mapper.map(rs, thriftGenericClass)));
-        return gatewayList;
-    }
-
-    public <R> R execute(Committer<EntityManager, R> committer) throws Exception {
-        EntityManager entityManager = JPAUtils.getEntityManager();
-        try {
-            entityManager.getTransaction().begin();
-            R r = committer.commit(entityManager);
-            entityManager.getTransaction().commit();
-            return r;
-        } finally {
-            entityManager.close();
-        }
-    }
-}
\ No newline at end of file
diff --git a/allocation-manager/airavata-allocation-manager/airavata-allocation-manager-server/src/main/java/org/apache/airavata/allocation/manager/db/repositories/DomainRepository.java b/allocation-manager/airavata-allocation-manager/airavata-allocation-manager-server/src/main/java/org/apache/airavata/allocation/manager/db/repositories/DomainRepository.java
deleted file mode 100644
index c86d85b..0000000
--- a/allocation-manager/airavata-allocation-manager/airavata-allocation-manager-server/src/main/java/org/apache/airavata/allocation/manager/db/repositories/DomainRepository.java
+++ /dev/null
@@ -1,33 +0,0 @@
-/**
- *
- * Licensed to the Apache Software Foundation (ASF) under one
- * or more contributor license agreements.  See the NOTICE file
- * distributed with this work for additional information
- * regarding copyright ownership.  The ASF licenses this file
- * to you under the Apache License, Version 2.0 (the
- * "License"); you may not use this file except in compliance
- * with the License.  You may obtain a copy of the License at
- *
- *   http://www.apache.org/licenses/LICENSE-2.0
- *
- * Unless required by applicable law or agreed to in writing,
- * software distributed under the License is distributed on an
- * "AS IS" BASIS, WITHOUT WARRANTIES OR CONDITIONS OF ANY
- * KIND, either express or implied.  See the License for the
- * specific language governing permissions and limitations
- * under the License.
- */
-package org.apache.airavata.allocation.manager.db.repositories;
-
-import org.apache.airavata.allocation.manager.db.entities.DomainEntity;
-import org.apache.airavata.allocation.manager.models.Domain;
-import org.slf4j.Logger;
-import org.slf4j.LoggerFactory;
-
-public class DomainRepository extends AbstractRepository<Domain, DomainEntity, String> {
-    private final static Logger logger = LoggerFactory.getLogger(DomainRepository.class);
-
-    public DomainRepository(){
-        super(Domain.class, DomainEntity.class);
-    }
-}
\ No newline at end of file
diff --git a/allocation-manager/airavata-allocation-manager/airavata-allocation-manager-server/src/main/java/org/apache/airavata/allocation/manager/db/repositories/RequestStatusRepository.java b/allocation-manager/airavata-allocation-manager/airavata-allocation-manager-server/src/main/java/org/apache/airavata/allocation/manager/db/repositories/RequestStatusRepository.java
deleted file mode 100644
index 71cbba8..0000000
--- a/allocation-manager/airavata-allocation-manager/airavata-allocation-manager-server/src/main/java/org/apache/airavata/allocation/manager/db/repositories/RequestStatusRepository.java
+++ /dev/null
@@ -1,14 +0,0 @@
-package org.apache.airavata.allocation.manager.db.repositories;
-
-import org.apache.airavata.allocation.manager.db.entities.RequestStatusEntity;
-import org.apache.airavata.allocation.manager.models.RequestStatus;
-import org.slf4j.Logger;
-import org.slf4j.LoggerFactory;
-
-public class RequestStatusRepository extends AbstractRepository<RequestStatus, RequestStatusEntity,String> {
-    private final static Logger logger = LoggerFactory.getLogger(DomainRepository.class);
-
-    public RequestStatusRepository(){
-        super(RequestStatus.class, RequestStatusEntity.class);
-    }
-}
\ No newline at end of file
diff --git a/allocation-manager/airavata-allocation-manager/airavata-allocation-manager-server/src/main/java/org/apache/airavata/allocation/manager/db/repositories/UserAllocationDetailPKRepository.java b/allocation-manager/airavata-allocation-manager/airavata-allocation-manager-server/src/main/java/org/apache/airavata/allocation/manager/db/repositories/UserAllocationDetailPKRepository.java
deleted file mode 100644
index 265e063..0000000
--- a/allocation-manager/airavata-allocation-manager/airavata-allocation-manager-server/src/main/java/org/apache/airavata/allocation/manager/db/repositories/UserAllocationDetailPKRepository.java
+++ /dev/null
@@ -1,14 +0,0 @@
-package org.apache.airavata.allocation.manager.db.repositories;
-
-import org.apache.airavata.allocation.manager.db.entities.UserAllocationDetailEntityPK;
-import org.apache.airavata.allocation.manager.models.UserAllocationDetailPK;
-import org.slf4j.Logger;
-import org.slf4j.LoggerFactory;
-
-public class UserAllocationDetailPKRepository extends AbstractRepository<UserAllocationDetailPK, UserAllocationDetailPK, String> {
-    private final static Logger logger = LoggerFactory.getLogger(DomainRepository.class);
-
-    public UserAllocationDetailPKRepository(){
-        super(UserAllocationDetailPK.class, UserAllocationDetailPK.class);
-    }
-}
\ No newline at end of file
diff --git a/allocation-manager/airavata-allocation-manager/airavata-allocation-manager-server/src/main/java/org/apache/airavata/allocation/manager/db/repositories/UserAllocationDetailRepository.java b/allocation-manager/airavata-allocation-manager/airavata-allocation-manager-server/src/main/java/org/apache/airavata/allocation/manager/db/repositories/UserAllocationDetailRepository.java
deleted file mode 100644
index adfd6d2..0000000
--- a/allocation-manager/airavata-allocation-manager/airavata-allocation-manager-server/src/main/java/org/apache/airavata/allocation/manager/db/repositories/UserAllocationDetailRepository.java
+++ /dev/null
@@ -1,14 +0,0 @@
-package org.apache.airavata.allocation.manager.db.repositories;
-
-import org.apache.airavata.allocation.manager.db.entities.UserAllocationDetailEntity;
-import org.apache.airavata.allocation.manager.models.UserAllocationDetail;
-import org.slf4j.Logger;
-import org.slf4j.LoggerFactory;
-
-public class UserAllocationDetailRepository extends AbstractRepository<UserAllocationDetail, UserAllocationDetailEntity, String> {
-    private final static Logger logger = LoggerFactory.getLogger(DomainRepository.class);
-
-    public UserAllocationDetailRepository(){
-        super(UserAllocationDetail.class, UserAllocationDetailEntity.class);
-    }
-}
\ No newline at end of file
diff --git a/allocation-manager/airavata-allocation-manager/airavata-allocation-manager-server/src/main/java/org/apache/airavata/allocation/manager/db/repositories/UserDetailRepository.java b/allocation-manager/airavata-allocation-manager/airavata-allocation-manager-server/src/main/java/org/apache/airavata/allocation/manager/db/repositories/UserDetailRepository.java
deleted file mode 100644
index c05ff5c..0000000
--- a/allocation-manager/airavata-allocation-manager/airavata-allocation-manager-server/src/main/java/org/apache/airavata/allocation/manager/db/repositories/UserDetailRepository.java
+++ /dev/null
@@ -1,19 +0,0 @@
-package org.apache.airavata.allocation.manager.db.repositories;
-
-import org.apache.airavata.allocation.manager.db.entities.UserDetailEntity;
-import org.apache.airavata.allocation.manager.models.UserDetail;
-import org.slf4j.Logger;
-import org.slf4j.LoggerFactory;
-
-public class UserDetailRepository extends AbstractRepository<UserDetail, UserDetailEntity, String> {
-    private final static Logger logger = LoggerFactory.getLogger(DomainRepository.class);
-
-    public UserDetailRepository(){
-        super(UserDetail.class, UserDetailEntity.class);
-    }
-
-    public static void main(String args[])
-    {
-
-    }
-}
\ No newline at end of file
diff --git a/allocation-manager/airavata-allocation-manager/airavata-allocation-manager-server/src/main/java/org/apache/airavata/allocation/manager/db/utils/Committer.java b/allocation-manager/airavata-allocation-manager/airavata-allocation-manager-server/src/main/java/org/apache/airavata/allocation/manager/db/utils/Committer.java
deleted file mode 100644
index 64e9abc..0000000
--- a/allocation-manager/airavata-allocation-manager/airavata-allocation-manager-server/src/main/java/org/apache/airavata/allocation/manager/db/utils/Committer.java
+++ /dev/null
@@ -1,26 +0,0 @@
-/**
- *
- * Licensed to the Apache Software Foundation (ASF) under one
- * or more contributor license agreements.  See the NOTICE file
- * distributed with this work for additional information
- * regarding copyright ownership.  The ASF licenses this file
- * to you under the Apache License, Version 2.0 (the
- * "License"); you may not use this file except in compliance
- * with the License.  You may obtain a copy of the License at
- *
- *   http://www.apache.org/licenses/LICENSE-2.0
- *
- * Unless required by applicable law or agreed to in writing,
- * software distributed under the License is distributed on an
- * "AS IS" BASIS, WITHOUT WARRANTIES OR CONDITIONS OF ANY
- * KIND, either express or implied.  See the License for the
- * specific language governing permissions and limitations
- * under the License.
- */
-package org.apache.airavata.allocation.manager.db.utils;
-
-@FunctionalInterface
-public interface Committer<T, R>  {
-
-    R commit(T t);
-}
\ No newline at end of file
diff --git a/allocation-manager/airavata-allocation-manager/airavata-allocation-manager-server/src/main/java/org/apache/airavata/allocation/manager/db/utils/ConnectionPool.java b/allocation-manager/airavata-allocation-manager/airavata-allocation-manager-server/src/main/java/org/apache/airavata/allocation/manager/db/utils/ConnectionPool.java
deleted file mode 100644
index 2d3a64e..0000000
--- a/allocation-manager/airavata-allocation-manager/airavata-allocation-manager-server/src/main/java/org/apache/airavata/allocation/manager/db/utils/ConnectionPool.java
+++ /dev/null
@@ -1,381 +0,0 @@
-/**
- *
- * Licensed to the Apache Software Foundation (ASF) under one
- * or more contributor license agreements.  See the NOTICE file
- * distributed with this work for additional information
- * regarding copyright ownership.  The ASF licenses this file
- * to you under the Apache License, Version 2.0 (the
- * "License"); you may not use this file except in compliance
- * with the License.  You may obtain a copy of the License at
- *
- *   http://www.apache.org/licenses/LICENSE-2.0
- *
- * Unless required by applicable law or agreed to in writing,
- * software distributed under the License is distributed on an
- * "AS IS" BASIS, WITHOUT WARRANTIES OR CONDITIONS OF ANY
- * KIND, either express or implied.  See the License for the
- * specific language governing permissions and limitations
- * under the License.
- */
-package org.apache.airavata.allocation.manager.db.utils;
-
-import org.slf4j.Logger;
-import org.slf4j.LoggerFactory;
-
-import javax.sql.DataSource;
-import java.sql.Connection;
-import java.sql.DriverManager;
-import java.sql.SQLException;
-import java.util.HashMap;
-import java.util.Iterator;
-import java.util.Stack;
-import java.util.concurrent.Semaphore;
-
-
-/**
- * A class for preallocating, recycling, and managing JDBC connections.
- */
-public class ConnectionPool {
-    private static final Logger logger = LoggerFactory.getLogger(ConnectionPool.class);
-
-    private long MAX_IDLE_TIME = 5 * 60 * 1000; // 5 minutes
-
-    private String driver;
-    private String url;
-    private String username;
-    private String password;
-    private String jdbcUrl;
-
-    private int maxConnections;
-
-    private boolean autoCommit = true;
-    private boolean waitIfBusy;
-
-    private Semaphore needConnection = new Semaphore(0);
-    private boolean stop;
-
-    private Stack<Connection> availableConnections;
-    private Stack<Connection> busyConnections;
-
-    private HashMap<Connection, Long> lastAccessTimeRecord = new HashMap<Connection, Long>();
-
-    private String urlType = "";
-
-    private DataSource datasource;
-
-    private int transactionIsolation = Connection.TRANSACTION_NONE;
-
-    private Thread clenupThread;
-    private Thread producerThread;
-
-    public ConnectionPool(String driver, String url, String username, String password, int initialConnections,
-                          int maxConnections, boolean waitIfBusy) throws SQLException {
-        this.driver = driver;
-        this.url = url;
-        this.username = username;
-        this.password = password;
-        this.urlType = "speratedURL";
-        initialize(initialConnections, maxConnections, waitIfBusy);
-    }
-
-    public ConnectionPool(String driver, String jdbcUrl, int initialConnections, int maxConnections,
-                          boolean waitIfBusy, boolean autoCommit, int transactionIsolation) throws SQLException {
-        this.driver = driver;
-        this.jdbcUrl = jdbcUrl;
-        this.urlType = "simpleURL";
-        this.autoCommit = autoCommit;
-        this.transactionIsolation = transactionIsolation;
-        initialize(initialConnections, maxConnections, waitIfBusy);
-    }
-
-    public ConnectionPool(String driver, String jdbcUrl, int initialConnections, int maxConnections, boolean waitIfBusy)
-            throws SQLException {
-        this.driver = driver;
-        this.jdbcUrl = jdbcUrl;
-        this.urlType = "simpleURL";
-        initialize(initialConnections, maxConnections, waitIfBusy);
-    }
-
-    public ConnectionPool(DataSource dataSource, int initialConnections, int maxConnections, boolean waitIfBusy)
-            throws SQLException {
-        this.urlType = "dataSource";
-        this.datasource = dataSource;
-        initialize(initialConnections, maxConnections, waitIfBusy);
-    }
-
-    /**
-     * Check if this connection pool is auto commit or not
-     *
-     * @return
-     */
-    public boolean isAutoCommit() {
-        return this.autoCommit;
-    }
-
-    private void initialize(int initialConnections, int maxConnections, boolean waitIfBusy) throws SQLException {
-        this.maxConnections = maxConnections;
-        this.waitIfBusy = waitIfBusy;
-
-        int sizeOfConnections = (initialConnections > maxConnections) ? maxConnections : initialConnections;
-
-        availableConnections = new Stack<Connection>();
-        busyConnections = new Stack<Connection>();
-
-        for (int i = 0; i < sizeOfConnections; i++) {
-            Connection con = makeNewConnection();
-            setTimeStamp(con);
-            availableConnections.push(con);
-
-        }
-
-        producerThread = new Thread(new FillUpThread());
-        producerThread.start();
-
-        clenupThread = new Thread(new CleanUpThread());
-        clenupThread.start();
-    }
-
-    public synchronized Connection getConnection() throws SQLException {
-        if (!availableConnections.isEmpty()) {
-            Connection existingConnection = availableConnections.pop();
-
-            // If connection on available list is closed (e.g.,
-            // it timed out), then remove it from available list
-            // and race for a connection again.
-            if (existingConnection.isClosed()) {
-                lastAccessTimeRecord.remove(existingConnection);
-                // notifyAll for fairness
-                notifyAll();
-            } else {
-                busyConnections.push(existingConnection);
-                setTimeStamp(existingConnection);
-                return existingConnection;
-            }
-        } else if (!waitIfBusy && busyConnections.size() >= maxConnections) {
-            // You reached maxConnections limit and waitIfBusy flag is false.
-            // Throw SQLException in such a case.
-            throw new SQLException("Connection limit reached");
-        } else {
-
-            if (busyConnections.size() < maxConnections) {
-                // available connection is empty, but total number of connection
-                // doesn't reach maxConnection. Request for more connection
-                needConnection.release();
-            }
-
-            try {
-                // wait for free connection
-                wait();
-            } catch (InterruptedException ie) {
-            }
-        }
-        // always race for connection forever
-        return getConnection();
-    }
-
-    // This explicitly makes a new connection. Called in
-    // the foreground when initializing the ConnectionPool,
-    // and called in the background when running.
-    private Connection makeNewConnection() throws SQLException {
-        try {
-            // Load database driver if not already loaded
-            Class.forName(driver);
-            Connection connection;
-            // Establish network connection to database
-            if (urlType.equals("speratedURL")) {
-                connection = DriverManager.getConnection(url, username, password);
-            } else if (urlType.equals("simpleURL")) {
-                connection = DriverManager.getConnection(jdbcUrl);
-            } else { // if(urlType.equals("dataSource")){
-                connection = datasource.getConnection();
-            }
-            connection.setTransactionIsolation(this.transactionIsolation);
-            connection.setAutoCommit(this.autoCommit);
-            return connection;
-        } catch (ClassNotFoundException cnfe) {
-            // Simplify try/catch blocks of people using this by
-            // throwing only one exception type.
-            throw new SQLException("Can't find class for driver: " + driver);
-        }
-    }
-
-    private synchronized void fillUpConnection(Connection conn) {
-        setTimeStamp(conn);
-        availableConnections.push(conn);
-
-        // notify all since new connection is created
-        notifyAll();
-    }
-
-    private void setTimeStamp(Connection connection) {
-        lastAccessTimeRecord.put(connection, System.currentTimeMillis());
-    }
-
-    // The database connection cannot be left idle for too long, otherwise TCP
-    // connection will be broken.
-    /**
-     * From http://forums.mysql.com/read.php?39,28450,57460#msg-57460 Okay, then it looks like wait_timeout on the
-     * server is killing your connection (it is set to 8 hours of idle time by default). Either set that value higher on
-     * your server, or configure your connection pool to not hold connections idle that long (I prefer the latter). Most
-     * folks I know that run MySQL with a connection pool in high-load production environments only let connections sit
-     * idle for a matter of minutes, since it only takes a few milliseconds to open a connection, and the longer one
-     * sits idle the more chance it will go "bad" because of a network hiccup or the MySQL server being restarted.
-     *
-     * @throws java.sql.SQLException
-     */
-    private boolean isConnectionStale(Connection connection) {
-        long currentTime = System.currentTimeMillis();
-        long lastAccess = lastAccessTimeRecord.get(connection);
-        if (currentTime - lastAccess > MAX_IDLE_TIME) {
-            return true;
-        } else
-            return false;
-    }
-
-    private synchronized void closeStaleConnections() {
-        // close idle connections
-        Iterator<Connection> iter = availableConnections.iterator();
-        while (iter.hasNext()) {
-            Connection existingConnection = iter.next();
-            if (isConnectionStale(existingConnection)) {
-                try {
-                    existingConnection.close();
-                    iter.remove();
-                } catch (SQLException sql) {
-                    logger.error(sql.getMessage(), sql);
-                }
-            }
-        }
-        // close busy connections that have been checked out for too long.
-        // This should not happen since this means program has bug for not
-        // releasing connections .
-        iter = busyConnections.iterator();
-        while (iter.hasNext()) {
-            Connection busyConnection = iter.next();
-            if (isConnectionStale(busyConnection)) {
-                try {
-                    busyConnection.close();
-                    iter.remove();
-                    logger.warn("****Connection has checked out too long. Forced release. Check the program for calling release connection [free(Connection) method]");
-                } catch (SQLException sql) {
-                    logger.error(sql.getMessage(), sql);
-                }
-            }
-        }
-    }
-
-    public synchronized void free(Connection connection) {
-        busyConnections.removeElement(connection);
-        availableConnections.addElement(connection);
-        // Wake up threads that are waiting for a connection
-        notifyAll();
-    }
-
-    /**
-     * Close all the connections. Use with caution: be sure no connections are in use before calling. Note that you are
-     * not <I>required</I> to call this when done with a ConnectionPool, since connections are guaranteed to be closed
-     * when garbage collected. But this method gives more control regarding when the connections are closed.
-     */
-    public synchronized void dispose() {
-        logger.info("Connection Pool Shutting down");
-
-        // stop clean up thread
-        this.stop = true;
-        this.clenupThread.interrupt();
-
-        // stop producer up thread
-        this.producerThread.interrupt();
-
-        // close all connection
-        closeConnections(availableConnections);
-        availableConnections = new Stack<Connection>();
-        closeConnections(busyConnections);
-        busyConnections = new Stack<Connection>();
-        lastAccessTimeRecord.clear();
-
-        logger.info("All connection is closed");
-
-        try {
-            this.clenupThread.join();
-            this.producerThread.join();
-        } catch (Exception e) {
-            logger.error("Cannot shutdown cleanup thread", e);
-        }
-
-        logger.info("Connection Pool Shutdown");
-    }
-
-    private void closeConnections(Stack<Connection> connections) {
-        while (!connections.isEmpty()) {
-            Connection connection = connections.pop();
-            try {
-                if (!connection.isClosed()) {
-                    connection.close();
-                }
-            } catch (SQLException sqle) {
-                // Ignore errors; garbage collect anyhow
-                logger.warn(sqle.getMessage());
-            }
-        }
-    }
-
-    public synchronized String toString() {
-        String info = "ConnectionPool(" + url + "," + username + ")" + ", available=" + availableConnections.size()
-                + ", busy=" + busyConnections.size() + ", max=" + maxConnections;
-        return (info);
-    }
-
-    class CleanUpThread implements Runnable {
-        public void run() {
-            while (!stop) {
-                try {
-                    Thread.sleep(MAX_IDLE_TIME);
-                    closeStaleConnections();
-                } catch (InterruptedException e) {
-                    logger.info("Clean up thread is interrupted to close");
-                }
-            }
-        }
-    }
-
-    class FillUpThread implements Runnable {
-        public void run() {
-            while (!stop) {
-                try {
-                    // block until get
-                    needConnection.acquire();
-
-                    Connection conn = makeNewConnection();
-                    fillUpConnection(conn);
-                } catch (SQLException e) {
-                    // cannot create connection (increase semaphore value back)
-                    needConnection.release();
-                    logger.error(e.getMessage(), e);
-                } catch (InterruptedException e) {
-                    logger.info("Fill up thread is interrupted to close");
-                    break;
-                }
-            }
-        }
-    }
-
-    public void shutdown() throws SQLException{
-        for (Connection c : availableConnections) {
-            try {
-                c.close();
-            } catch (SQLException e) {
-                logger.error("Error while closing the connection", e);
-                throw new SQLException("Error while closing the connection", e);
-            }
-        }
-
-        for (Connection c : busyConnections) {
-            try {
-                c.close();
-            } catch (SQLException e) {
-                logger.error("Error while closing the connection", e);
-                throw new SQLException("Error while closing the connection", e);
-            }
-        }
-    }
-}
\ No newline at end of file
diff --git a/allocation-manager/airavata-allocation-manager/airavata-allocation-manager-server/src/main/java/org/apache/airavata/allocation/manager/db/utils/DBConstants.java b/allocation-manager/airavata-allocation-manager/airavata-allocation-manager-server/src/main/java/org/apache/airavata/allocation/manager/db/utils/DBConstants.java
deleted file mode 100644
index 1de1363..0000000
--- a/allocation-manager/airavata-allocation-manager/airavata-allocation-manager-server/src/main/java/org/apache/airavata/allocation/manager/db/utils/DBConstants.java
+++ /dev/null
@@ -1,106 +0,0 @@
-/**
- *
- * Licensed to the Apache Software Foundation (ASF) under one
- * or more contributor license agreements.  See the NOTICE file
- * distributed with this work for additional information
- * regarding copyright ownership.  The ASF licenses this file
- * to you under the Apache License, Version 2.0 (the
- * "License"); you may not use this file except in compliance
- * with the License.  You may obtain a copy of the License at
- *
- *   http://www.apache.org/licenses/LICENSE-2.0
- *
- * Unless required by applicable law or agreed to in writing,
- * software distributed under the License is distributed on an
- * "AS IS" BASIS, WITHOUT WARRANTIES OR CONDITIONS OF ANY
- * KIND, either express or implied.  See the License for the
- * specific language governing permissions and limitations
- * under the License.
- */
-package org.apache.airavata.allocation.manager.db.utils;
-
-import org.slf4j.Logger;
-import org.slf4j.LoggerFactory;
-
-public class DBConstants {
-    private final static Logger logger = LoggerFactory.getLogger(DBConstants.class);
-
-    public static int SELECT_MAX_ROWS = 1000;
-
-    public static class DomainTable {
-        public static final String DOMAIN_ID = "domainId";
-        public static final String NAME = "name";
-        public static final String DESCRIPTION = "description";
-        public static final String CREATED_TIME = "createdTime";
-        public static final String UPDATED_TIME = "updatedTime";
-    }
-
-    public static class UserTable {
-        public static final String USER_ID = "userId";
-        public static final String DOMAIN_ID = "domainId";
-        public static final String USER_NAME = "userName";
-        public static final String CREATED_TIME = "createdTime";
-        public static final String UPDATED_TIME = "updatedTime";
-    }
-
-    public static class UserGroupTable {
-        public static final String GROUP_ID = "groupId";
-        public static final String DOMAIN_ID = "domainId";
-        public static final String NAME = "name";
-        public static final String DESCRIPTION = "description";
-        public static final String OWNER_ID = "ownerId";
-        public static final String GROUP_TYPE = "groupType";
-        public static final String GROUP_CARDINALITY = "groupCardinality";
-        public static final String CREATED_TIME = "createdTime";
-        public static final String UPDATED_TIME = "updatedTime";
-    }
-
-    public static class GroupMembershipTable {
-        public static final String PARENT_ID = "parentId";
-        public static final String CHILD_ID = "childId";
-        public static final String CHILD_TYPE = "childType";
-        public static final String DOMAIN_ID = "domainId";
-        public static final String CREATED_TIME = "createdTime";
-        public static final String UPDATED_TIME = "updatedTime";
-    }
-
-    public static class EntityTypeTable {
-        public static final String ENTITY_TYPE_ID = "entityTypeId";
-        public static final String DOMAIN_ID = "domainId";
-        public static final String CREATED_TIME = "createdTime";
-        public static final String UPDATED_TIME = "updatedTime";
-    }
-
-    public static class PermissionTypeTable {
-        public static final String ENTITY_TYPE_ID = "permissionTypeId";
-        public static final String DOMAIN_ID = "domainId";
-        public static final String NAME = "name";
-        public static final String CREATED_TIME = "createdTime";
-        public static final String UPDATED_TIME = "updatedTime";
-    }
-
-    public static class EntityTable {
-        public static final String ENTITY_ID = "entityId";
-        public static final String PARENT_ENTITY_ID = "parentEntityId";
-        public static final String ENTITY_TYPE_ID = "entityTypeId";
-        public static final String NAME = "name";
-        public static final String DESCRIPTION = "description";
-        public static final String FULL_TEXT = "fullText";
-        public static final String CREATED_TIME = "createdTime";
-        public static final String UPDATED_TIME = "updatedTime";
-        public static final String DOMAIN_ID = "domainId";
-        public static final String ORIGINAL_ENTITY_CREATION_TIME = "originalEntityCreationTime";
-        public static final String SHARED = "shared";
-    }
-
-    public static class SharingTable {
-        public static final String DOMAIN_ID = "domainId";
-        public static final String PERMISSION_TYPE_ID = "permissionTypeId";
-        public static final String ENTITY_ID = "entityId";
-        public static final String GROUP_ID = "groupId";
-        public static final String INHERITED_PARENT_ID = "inheritedParentId";
-        public static final String SHARING_TYPE = "sharingType";
-        public static final String CREATED_TIME = "createdTime";
-        public static final String UPDATED_TIME = "updatedTime";
-    }
-}
\ No newline at end of file
diff --git a/allocation-manager/airavata-allocation-manager/airavata-allocation-manager-server/src/main/java/org/apache/airavata/allocation/manager/db/utils/DatabaseCreator.java b/allocation-manager/airavata-allocation-manager/airavata-allocation-manager-server/src/main/java/org/apache/airavata/allocation/manager/db/utils/DatabaseCreator.java
deleted file mode 100644
index d8368f5..0000000
--- a/allocation-manager/airavata-allocation-manager/airavata-allocation-manager-server/src/main/java/org/apache/airavata/allocation/manager/db/utils/DatabaseCreator.java
+++ /dev/null
@@ -1,352 +0,0 @@
-/**
- *
- * Licensed to the Apache Software Foundation (ASF) under one
- * or more contributor license agreements.  See the NOTICE file
- * distributed with this work for additional information
- * regarding copyright ownership.  The ASF licenses this file
- * to you under the Apache License, Version 2.0 (the
- * "License"); you may not use this file except in compliance
- * with the License.  You may obtain a copy of the License at
- *
- *   http://www.apache.org/licenses/LICENSE-2.0
- *
- * Unless required by applicable law or agreed to in writing,
- * software distributed under the License is distributed on an
- * "AS IS" BASIS, WITHOUT WARRANTIES OR CONDITIONS OF ANY
- * KIND, either express or implied.  See the License for the
- * specific language governing permissions and limitations
- * under the License.
- */
-package org.apache.airavata.allocation.manager.db.utils;
-
-import org.slf4j.Logger;
-import org.slf4j.LoggerFactory;
-
-import java.io.BufferedReader;
-import java.io.IOException;
-import java.io.InputStream;
-import java.io.InputStreamReader;
-import java.sql.*;
-import java.util.StringTokenizer;
-
-/**
- * This class creates the database tables required for airavata with default configuration this
- * class creates derby database in server mode. User can specify required database in appropriate
- * properties files.
- */
-public class DatabaseCreator {
-    private final static Logger logger = LoggerFactory.getLogger(DatabaseCreator.class);
-
-    public enum DatabaseType {
-        derby("(?i).*derby.*"), mysql("(?i).*mysql.*"), other("");
-
-        private String pattern;
-
-        private DatabaseType(String matchingPattern) {
-            this.pattern = matchingPattern;
-        }
-
-        public String getMatchingPattern() {
-            return this.pattern;
-        }
-    }
-
-    private static DatabaseType[] supportedDatabase = new DatabaseType[] { DatabaseType.derby, DatabaseType.mysql };
-
-    private static Logger log = LoggerFactory.getLogger(DatabaseCreator.class);
-    private static final String delimiter = ";";
-
-    /**
-     * Creates database
-     *
-     * @throws Exception
-     */
-    public static void createRegistryDatabase(String prefix, Connection conn) throws Exception {
-        createDatabase(prefix, conn);
-    }
-
-
-
-    /**
-     * Checks whether database tables are created by using select * on given table name
-     *
-     * @param tableName
-     *            Table which should be existed
-     * @return <code>true</core> if checkSQL is success, else <code>false</code> .
-     */
-    public static boolean isDatabaseStructureCreated(String tableName, Connection conn) {
-        try {
-
-            log.debug("Running a query to test the database tables existence.");
-
-            // check whether the tables are already created with a query
-            Statement statement = null;
-            try {
-                statement = conn.createStatement();
-                ResultSet rs = statement.executeQuery("select * from " + tableName);
-                if (rs != null) {
-                    rs.close();
-                }
-            } finally {
-                try {
-                    if (statement != null) {
-                        statement.close();
-                    }
-                } catch (SQLException e) {
-                    return false;
-                }
-            }
-        } catch (SQLException e) {
-            return false;
-        }
-
-        return true;
-    }
-
-    /**
-     * executes given sql
-     *
-     * @param sql
-     * @throws Exception
-     */
-    private static void executeSQL(String sql, Connection conn) throws Exception {
-        // Check and ignore empty statements
-        if ("".equals(sql.trim())) {
-            return;
-        }
-
-        Statement statement = null;
-        try {
-            log.debug("SQL : " + sql);
-
-            boolean ret;
-            int updateCount = 0, updateCountTotal = 0;
-            statement = conn.createStatement();
-            ret = statement.execute(sql);
-            updateCount = statement.getUpdateCount();
-            do {
-                if (!ret) {
-                    if (updateCount != -1) {
-                        updateCountTotal += updateCount;
-                    }
-                }
-                ret = statement.getMoreResults();
-                if (ret) {
-                    updateCount = statement.getUpdateCount();
-                }
-            } while (ret);
-
-            log.debug(sql + " : " + updateCountTotal + " rows affected");
-
-            SQLWarning warning = conn.getWarnings();
-            while (warning != null) {
-                log.info(warning + " sql warning");
-                warning = warning.getNextWarning();
-            }
-            conn.clearWarnings();
-        } catch (SQLException e) {
-            if (e.getSQLState().equals("X0Y32")) {
-                // eliminating the table already exception for the derby
-                // database
-                log.info("Table Already Exists", e);
-            } else {
-                throw new Exception("Error occurred while executing : " + sql, e);
-            }
-        } finally {
-            if (statement != null) {
-                try {
-                    statement.close();
-                } catch (SQLException e) {
-                    log.error("Error occurred while closing result set.", e);
-                }
-            }
-        }
-    }
-
-    /**
-     * computes relatational database type using database name
-     *
-     * @return DatabaseType
-     * @throws Exception
-     *
-     */
-    public static DatabaseType getDatabaseType(Connection conn) throws Exception {
-        try {
-            if (conn != null && (!conn.isClosed())) {
-                DatabaseMetaData metaData = conn.getMetaData();
-                String databaseProductName = metaData.getDatabaseProductName();
-                return checkType(databaseProductName);
-            }
-        } catch (SQLException e) {
-            String msg = "Failed to create Airavata database." + e.getMessage();
-            log.error(msg, e);
-            throw new Exception(msg, e);
-        }
-        return DatabaseType.other;
-    }
-
-    /**
-     * Overloaded method with String input
-     *
-     * @return DatabaseType
-     * @throws Exception
-     *
-     */
-    public static DatabaseType getDatabaseType(String dbUrl) throws Exception {
-        return checkType(dbUrl);
-    }
-
-    private static DatabaseType checkType(String text) throws Exception {
-        try {
-            if (text != null) {
-                for (DatabaseType type : supportedDatabase) {
-                    if (text.matches(type.getMatchingPattern()))
-                        return type;
-                }
-            }
-            String msg = "Unsupported database: " + text
-                    + ". Database will not be created automatically by the Airavata. "
-                    + "Please create the database using appropriate database scripts for " + "the database.";
-            throw new Exception(msg);
-
-        } catch (SQLException e) {
-            String msg = "Failed to create Airavatadatabase." + e.getMessage();
-            log.error(msg, e);
-            throw new Exception(msg, e);
-        }
-    }
-
-    /**
-     * Get scripts location which is prefix + "-" + databaseType + ".sql"
-     *
-     * @param prefix
-     * @param databaseType
-     * @return script location
-     */
-    private static String getScriptLocation(String prefix, DatabaseType databaseType) {
-        String scriptName = prefix + "-" + databaseType + ".sql";
-        log.debug("Loading database script from :" + scriptName);
-        return  scriptName;
-    }
-
-    private static void createDatabase(String prefix, Connection conn) throws Exception {
-        Statement statement = null;
-        try {
-            conn.setAutoCommit(false);
-            statement = conn.createStatement();
-            executeSQLScript(getScriptLocation(prefix, DatabaseCreator.getDatabaseType(conn)), conn);
-            conn.commit();
-            log.debug("Tables are created successfully.");
-        } catch (SQLException e) {
-            String msg = "Failed to create database tables for Airavata resource store. " + e.getMessage();
-            log.error(msg, e);
-            conn.rollback();
-            throw new Exception(msg, e);
-        } finally {
-            conn.setAutoCommit(true);
-            try {
-                if (statement != null) {
-                    statement.close();
-                }
-            } catch (SQLException e) {
-                log.error("Failed to close statement.", e);
-            }
-        }
-    }
-
-    private static void executeSQLScript(String dbscriptName, Connection conn) throws Exception {
-        StringBuffer sql = new StringBuffer();
-        BufferedReader reader = null;
-
-        try {
-            InputStream is = DatabaseCreator.class.getClassLoader().getResourceAsStream(dbscriptName);
-            if(is == null) {
-                logger.info("Script file not found at " + dbscriptName + ". Uses default database script file");
-                DatabaseType databaseType = DatabaseCreator.getDatabaseType(conn);
-                if(databaseType.equals(DatabaseType.derby)){
-                    is = DatabaseCreator.class.getClassLoader().getResourceAsStream("sharing-registry-derby.sql");
-                }else if(databaseType.equals(DatabaseType.mysql)){
-                    is = DatabaseCreator.class.getClassLoader().getResourceAsStream("sharing-registry-mysql.sql");
-                }
-            }
-            reader = new BufferedReader(new InputStreamReader(is));
-            String line;
-            while ((line = reader.readLine()) != null) {
-                line = line.trim();
-                if (line.startsWith("//")) {
-                    continue;
-                }
-                if (line.startsWith("--")) {
-                    continue;
-                }
-                StringTokenizer st = new StringTokenizer(line);
-                if (st.hasMoreTokens()) {
-                    String token = st.nextToken();
-                    if ("REM".equalsIgnoreCase(token)) {
-                        continue;
-                    }
-                }
-                sql.append(" ").append(line);
-
-                // SQL defines "--" as a comment to EOL
-                // and in Oracle it may contain a hint
-                // so we cannot just remove it, instead we must end it
-                if (line.indexOf("--") >= 0) {
-                    sql.append("\n");
-                }
-                if ((checkStringBufferEndsWith(sql, delimiter))) {
-                    executeSQL(sql.substring(0, sql.length() - delimiter.length()), conn);
-                    sql.replace(0, sql.length(), "");
-                }
-            }
-            // Catch any statements not followed by ;
-            if (sql.length() > 0) {
-                executeSQL(sql.toString(), conn);
-            }
-        } catch (IOException e) {
-            log.error("Error occurred while executing SQL script for creating Airavata database", e);
-            throw new Exception("Error occurred while executing SQL script for creating Airavata database", e);
-
-        } finally {
-            if (reader != null) {
-                reader.close();
-            }
-        }
-    }
-
-    /**
-     * Checks that a string buffer ends up with a given string. It may sound trivial with the existing JDK API but the
-     * various implementation among JDKs can make those methods extremely resource intensive and perform poorly due to
-     * massive memory allocation and copying. See
-     *
-     * @param buffer
-     *            the buffer to perform the check on
-     * @param suffix
-     *            the suffix
-     * @return <code>true</code> if the character sequence represented by the argument is a suffix of the character
-     *         sequence represented by the StringBuffer object; <code>false</code> otherwise. Note that the result will
-     *         be <code>true</code> if the argument is the empty string.
-     */
-    public static boolean checkStringBufferEndsWith(StringBuffer buffer, String suffix) {
-        if (suffix.length() > buffer.length()) {
-            return false;
-        }
-        // this loop is done on purpose to avoid memory allocation performance
-        // problems on various JDKs
-        // StringBuffer.lastIndexOf() was introduced in jdk 1.4 and
-        // implementation is ok though does allocation/copying
-        // StringBuffer.toString().endsWith() does massive memory
-        // allocation/copying on JDK 1.5
-        // See http://issues.apache.org/bugzilla/show_bug.cgi?id=37169
-        int endIndex = suffix.length() - 1;
-        int bufferIndex = buffer.length() - 1;
-        while (endIndex >= 0) {
-            if (buffer.charAt(bufferIndex) != suffix.charAt(endIndex)) {
-                return false;
-            }
-            bufferIndex--;
-            endIndex--;
-        }
-        return true;
-    }
-}
\ No newline at end of file
diff --git a/allocation-manager/airavata-allocation-manager/airavata-allocation-manager-server/src/main/java/org/apache/airavata/allocation/manager/db/utils/JPAUtils.java b/allocation-manager/airavata-allocation-manager/airavata-allocation-manager-server/src/main/java/org/apache/airavata/allocation/manager/db/utils/JPAUtils.java
deleted file mode 100644
index 3781c4b..0000000
--- a/allocation-manager/airavata-allocation-manager/airavata-allocation-manager-server/src/main/java/org/apache/airavata/allocation/manager/db/utils/JPAUtils.java
+++ /dev/null
@@ -1,215 +0,0 @@
-/**
- *
- * Licensed to the Apache Software Foundation (ASF) under one
- * or more contributor license agreements.  See the NOTICE file
- * distributed with this work for additional information
- * regarding copyright ownership.  The ASF licenses this file
- * to you under the Apache License, Version 2.0 (the
- * "License"); you may not use this file except in compliance
- * with the License.  You may obtain a copy of the License at
- *
- *   http://www.apache.org/licenses/LICENSE-2.0
- *
- * Unless required by applicable law or agreed to in writing,
- * software distributed under the License is distributed on an
- * "AS IS" BASIS, WITHOUT WARRANTIES OR CONDITIONS OF ANY
- * KIND, either express or implied.  See the License for the
- * specific language governing permissions and limitations
- * under the License.
- */
-package org.apache.airavata.allocation.manager.db.utils;
-
-import org.apache.airavata.common.exception.ApplicationSettingsException;
-import org.apache.airavata.common.utils.ServerSettings;
-import org.apache.airavata.allocation.manager.models.AllocationManagerException;
-import org.apache.derby.drda.NetworkServerControl;
-import org.slf4j.Logger;
-import org.slf4j.LoggerFactory;
-
-import javax.persistence.*;
-import java.io.IOException;
-import java.net.InetAddress;
-import java.net.URI;
-import java.sql.Connection;
-import java.sql.SQLException;
-import java.util.HashMap;
-import java.util.Map;
-
-public class JPAUtils {
-    private final static Logger logger = LoggerFactory.getLogger(JPAUtils.class);
-
-    public static final String PERSISTENCE_UNIT_NAME = "airavata-sharing-registry";
-    public static final String SHARING_REG_JDBC_DRIVER = "sharingcatalog.jdbc.driver";
-    public static final String SHARING_REG_JDBC_URL = "sharingcatalog.jdbc.url";
-    public static final String SHARING_REG_JDBC_USER = "sharingcatalog.jdbc.user";
-    public static final String SHARING_REG_JDBC_PWD = "sharingcatalog.jdbc.password";
-    public static final String SHARING_REG_VALIDATION_QUERY = "sharingcatalog.validationQuery";
-    public static final String JPA_CACHE_SIZE = "jpa.cache.size";
-    public static final String JPA_CACHE_ENABLED = "cache.enable";
-
-    public static final String CONFIGURATION = "CONFIGURATION";
-    public static final String START_DERBY_ENABLE = "start.derby.server.mode";
-    public static final String DERBY_SERVER_MODE_SYS_PROPERTY = "derby.drda.startNetworkServer";
-    private static NetworkServerControl server;
-    private static JdbcStorage db;
-    private static String jdbcURl;
-    private static String jdbcDriver;
-    private static String jdbcUser;
-    private static String jdbcPassword;
-
-    @PersistenceUnit(unitName = PERSISTENCE_UNIT_NAME)
-    protected static EntityManagerFactory factory;
-    @PersistenceContext(unitName = PERSISTENCE_UNIT_NAME)
-    private static EntityManager entityManager;
-
-    public synchronized static EntityManager getEntityManager() throws Exception {
-        if (factory == null) {
-            String connectionProperties = "DriverClassName=" + readServerProperties(SHARING_REG_JDBC_DRIVER) + "," +
-                    "Url=" + readServerProperties(SHARING_REG_JDBC_URL) + "?autoReconnect=true," +
-                    "Username=" + readServerProperties(SHARING_REG_JDBC_USER) + "," +
-                    "Password=" + readServerProperties(SHARING_REG_JDBC_PWD) +
-                    ",validationQuery=" + readServerProperties(SHARING_REG_VALIDATION_QUERY);
-
-//            String connectionProperties = "DriverClassName=com.mysql.jdbc.Driver," +
-//                    "Url=jdbc:mysql://localhost:3306/airavata_sharing_catalog?autoReconnect=true," +
-//                    "Username=root," +
-//                    "Password=," +
-//                    ",validationQuery=SELECT 1 FROM CONFIGURATION";
-
-            Map<String, String> properties = new HashMap<String, String>();
-            properties.put("openjpa.ConnectionDriverName", "org.apache.commons.dbcp.BasicDataSource");
-            properties.put("openjpa.ConnectionProperties", connectionProperties);
-            properties.put("openjpa.DynamicEnhancementAgent", "true");
-            properties.put("openjpa.RuntimeUnenhancedClasses", "unsupported");
-
-//            properties.put("openjpa.DataCache", "" + readServerProperties(JPA_CACHE_ENABLED)
-//                    + "(CacheSize=" + Integer.valueOf(readServerProperties(JPA_CACHE_SIZE)) + ", SoftReferenceSize=0)");
-//            properties.put("openjpa.QueryCache", "" + readServerProperties(JPA_CACHE_ENABLED)
-//                    + "(CacheSize=" + Integer.valueOf(readServerProperties(JPA_CACHE_SIZE)) + ", SoftReferenceSize=0)");
-
-            properties.put("openjpa.RemoteCommitProvider", "sjvm");
-            properties.put("openjpa.Log", "DefaultLevel=INFO, Runtime=INFO, Tool=INFO, SQL=INFO");
-            properties.put("openjpa.jdbc.SynchronizeMappings", "buildSchema(ForeignKeys=true)");
-            properties.put("openjpa.jdbc.QuerySQLCache", "false");
-//            properties.put("openjpa.Multithreaded", "true");
-            properties.put("openjpa.ConnectionFactoryProperties", "PrettyPrint=true, PrettyPrintLineLength=72," +
-                    " PrintParameters=true, MaxActive=10, MaxIdle=5, MinIdle=2, MaxWait=31536000,  autoReconnect=true");
-            properties.put("openjpa.RuntimeUnenhancedClasses", "warn");
-            factory = Persistence.createEntityManagerFactory(PERSISTENCE_UNIT_NAME, properties);
-        }
-
-        entityManager = factory.createEntityManager();
-        return entityManager;
-    }
-
-    public static void initializeDB() throws Exception {
-        jdbcDriver = readServerProperties(SHARING_REG_JDBC_DRIVER);
-        jdbcURl = readServerProperties(SHARING_REG_JDBC_URL);
-        jdbcUser = readServerProperties(SHARING_REG_JDBC_USER);
-        jdbcPassword = readServerProperties(SHARING_REG_JDBC_PWD);
-        jdbcURl = jdbcURl + "?" + "user=" + jdbcUser + "&" + "password=" + jdbcPassword;
-
-        if (getDBType(jdbcURl).equals("derby") && isDerbyStartEnabled()) {
-            startDerbyInServerMode();
-        }
-        db = new JdbcStorage(10, 50, jdbcURl, jdbcDriver, true);
-
-        Connection conn = null;
-        try {
-            conn = db.connect();
-            if (!DatabaseCreator.isDatabaseStructureCreated(CONFIGURATION, conn)) {
-                DatabaseCreator.createRegistryDatabase("database_scripts/sharing-registry", conn);
-                logger.info("New Database created for Sharing Catalog !!! ");
-            } else {
-                logger.info("Database already created for Sharing Catalog !!!");
-            }
-        } catch (Exception e) {
-            logger.error(e.getMessage(), e);
-            throw new RuntimeException("Database failure", e);
-        } finally {
-            db.closeConnection(conn);
-            try {
-                if(conn != null){
-                    if (!conn.getAutoCommit()) {
-                        conn.commit();
-                    }
-                    conn.close();
-                }
-            } catch (SQLException e) {
-                logger.error("Error while closing database connection...", e.getMessage(), e);
-            }
-        }
-    }
-
-    public static String getDBType(String jdbcUrl){
-        try{
-            String cleanURI = jdbcUrl.substring(5);
-            URI uri = URI.create(cleanURI);
-            return uri.getScheme();
-        } catch (Exception e) {
-            logger.error(e.getMessage(), e);
-            return null;
-        }
-    }
-
-    public static boolean isDerbyStartEnabled(){
-        try {
-            String s = ServerSettings.getSetting(START_DERBY_ENABLE);
-            if("true".equals(s)){
-                return true;
-            }
-        }  catch (ApplicationSettingsException e) {
-            logger.error("Unable to read airavata server properties", e.getMessage(), e);
-            return false;
-        }
-        return false;
-    }
-
-    public static void startDerbyInServerMode() {
-        try {
-            System.setProperty(DERBY_SERVER_MODE_SYS_PROPERTY, "true");
-            server = new NetworkServerControl(InetAddress.getByName("0.0.0.0"),
-                    getPort(jdbcURl),
-                    jdbcUser, jdbcPassword);
-            java.io.PrintWriter consoleWriter = new java.io.PrintWriter(System.out, true);
-            server.start(consoleWriter);
-        } catch (IOException e) {
-            logger.error("Unable to start Apache derby in the server mode! Check whether " +
-                    "specified port is available");
-        } catch (Exception e) {
-            logger.error("Unable to start Apache derby in the server mode! Check whether " +
-                    "specified port is available");
-        }
-    }
-
-    public static void stopDerbyInServerMode() {
-        System.setProperty(DERBY_SERVER_MODE_SYS_PROPERTY, "false");
-        if (server!=null){
-            try {
-                server.shutdown();
-            } catch (Exception e) {
-                logger.error("Error when stopping the derby server : "+e.getLocalizedMessage());
-            }
-        }
-    }
-
-    public static int getPort(String jdbcURL){
-        try{
-            String cleanURI = jdbcURL.substring(5);
-            URI uri = URI.create(cleanURI);
-            return uri.getPort();
-        } catch (Exception e) {
-            logger.error(e.getMessage(), e);
-            return -1;
-        }
-    }
-
-    public static String readServerProperties(String propertyName) throws Exception {
-        try {
-            return ServerSettings.getSetting(propertyName);
-        } catch (ApplicationSettingsException e) {
-            logger.error("Unable to read airavata-server.properties...", e);
-            throw new Exception("Unable to read airavata-server.properties...");
-        }
-    }
-}
\ No newline at end of file
diff --git a/allocation-manager/airavata-allocation-manager/airavata-allocation-manager-server/src/main/java/org/apache/airavata/allocation/manager/db/utils/JdbcStorage.java b/allocation-manager/airavata-allocation-manager/airavata-allocation-manager-server/src/main/java/org/apache/airavata/allocation/manager/db/utils/JdbcStorage.java
deleted file mode 100644
index ea3a360..0000000
--- a/allocation-manager/airavata-allocation-manager/airavata-allocation-manager-server/src/main/java/org/apache/airavata/allocation/manager/db/utils/JdbcStorage.java
+++ /dev/null
@@ -1,174 +0,0 @@
-/**
- *
- * Licensed to the Apache Software Foundation (ASF) under one
- * or more contributor license agreements.  See the NOTICE file
- * distributed with this work for additional information
- * regarding copyright ownership.  The ASF licenses this file
- * to you under the Apache License, Version 2.0 (the
- * "License"); you may not use this file except in compliance
- * with the License.  You may obtain a copy of the License at
- *
- *   http://www.apache.org/licenses/LICENSE-2.0
- *
- * Unless required by applicable law or agreed to in writing,
- * software distributed under the License is distributed on an
- * "AS IS" BASIS, WITHOUT WARRANTIES OR CONDITIONS OF ANY
- * KIND, either express or implied.  See the License for the
- * specific language governing permissions and limitations
- * under the License.
- */
-package org.apache.airavata.allocation.manager.db.utils;
-import org.slf4j.Logger;
-import org.slf4j.LoggerFactory;
-
-import java.sql.*;
-
-public class JdbcStorage {
-    private static Logger log = LoggerFactory.getLogger(JdbcStorage.class);
-
-    private ConnectionPool connectionPool;
-
-    public JdbcStorage(String jdbcUrl, String jdbcDriver) {
-        // default init connection and max connection
-        this(3, 50, jdbcUrl, jdbcDriver, true);
-    }
-
-    public JdbcStorage(int initCon, int maxCon, String url, String driver, boolean enableTransactions) {
-        try {
-            if (enableTransactions) {
-                connectionPool = new ConnectionPool(driver, url, initCon, maxCon, true, false,
-                        Connection.TRANSACTION_SERIALIZABLE);
-            } else {
-                connectionPool = new ConnectionPool(driver, url, initCon, maxCon, true);
-            }
-        } catch (Exception e) {
-            throw new RuntimeException("Failed to create database connection pool.", e);
-        }
-    }
-
-    /**
-     * Check if this connection pool is auto commit or not
-     *
-     * @return
-     */
-    public boolean isAutoCommit() {
-        return connectionPool.isAutoCommit();
-    }
-
-    public void commit(Connection conn) {
-        try {
-            if (conn != null && !conn.getAutoCommit()) {
-                conn.commit();
-            }
-        } catch (SQLException sqle) {
-            log.error("Cannot commit data", sqle);
-        }
-    }
-
-    public void commitAndFree(Connection conn) {
-        commit(conn);
-        closeConnection(conn);
-    }
-
-    public void rollback(Connection conn) {
-        try {
-            if (conn != null && !conn.getAutoCommit()) {
-                conn.rollback();
-            }
-        } catch (SQLException sqle) {
-            log.error("Cannot Rollback data", sqle);
-        }
-    }
-
-    public void rollbackAndFree(Connection conn) {
-        rollback(conn);
-        closeConnection(conn);
-    }
-
-    public Connection connect() {
-
-        Connection conn = null;
-        try {
-            conn = connectionPool.getConnection();
-        } catch (SQLException e) {
-            log.error(e.getMessage(), e);
-        }
-        return conn;
-    }
-
-    /**
-     * This method is provided so that you can have better control over the statement. For example: You can use
-     * stmt.setString to convert quotation mark automatically in an UPDATE statement
-     *
-     * NOTE: Statement is closed after execution
-     */
-    public int executeUpdateAndClose(PreparedStatement stmt) throws SQLException {
-        int rows = 0;
-        try {
-            rows = stmt.executeUpdate();
-            if (rows == 0) {
-                log.info("Problem: 0 rows affected by insert/update/delete statement.");
-            }
-        } finally {
-            stmt.close();
-        }
-        return rows;
-    }
-
-    public int countRow(String tableName, String columnName) throws SQLException {
-        String query = new String("SELECT COUNT(" + columnName + ") FROM " + tableName);
-        int count = -1;
-        Connection conn = null;
-        PreparedStatement stmt = null;
-        try {
-            conn = connectionPool.getConnection();
-            stmt = conn.prepareStatement(query);
-            ResultSet rs = stmt.executeQuery();
-            rs.next();
-            count = rs.getInt(1);
-            commit(conn);
-        } catch (SQLException sql) {
-            rollback(conn);
-            throw sql;
-        } finally {
-            try {
-                if (stmt != null && !stmt.isClosed()) {
-                    stmt.close();
-                }
-            } finally {
-                closeConnection(conn);
-            }
-        }
-        return count;
-    }
-
-    public void quietlyClose(Connection conn, Statement... stmts) {
-        if (stmts != null) {
-            for (Statement stmt : stmts) {
-                try {
-                    if (stmt != null && !stmt.isClosed()) {
-                        stmt.close();
-                    }
-                } catch (SQLException sql) {
-                    log.error(sql.getMessage(), sql);
-                }
-            }
-        }
-        closeConnection(conn);
-    }
-
-    public void closeConnection(Connection conn) {
-        if (conn != null) {
-            connectionPool.free(conn);
-        }
-    }
-
-    public void closeAllConnections() {
-        if (connectionPool != null)
-            connectionPool.dispose();
-    }
-
-    public void shutdown() throws SQLException {
-        connectionPool.shutdown();
-    }
-}
\ No newline at end of file
diff --git a/allocation-manager/airavata-allocation-manager/airavata-allocation-manager-server/src/main/java/org/apache/airavata/allocation/manager/db/utils/ObjectMapperSingleton.java b/allocation-manager/airavata-allocation-manager/airavata-allocation-manager-server/src/main/java/org/apache/airavata/allocation/manager/db/utils/ObjectMapperSingleton.java
deleted file mode 100644
index b5f6c00..0000000
--- a/allocation-manager/airavata-allocation-manager/airavata-allocation-manager-server/src/main/java/org/apache/airavata/allocation/manager/db/utils/ObjectMapperSingleton.java
+++ /dev/null
@@ -1,38 +0,0 @@
-/**
- *
- * Licensed to the Apache Software Foundation (ASF) under one
- * or more contributor license agreements.  See the NOTICE file
- * distributed with this work for additional information
- * regarding copyright ownership.  The ASF licenses this file
- * to you under the Apache License, Version 2.0 (the
- * "License"); you may not use this file except in compliance
- * with the License.  You may obtain a copy of the License at
- *
- *   http://www.apache.org/licenses/LICENSE-2.0
- *
- * Unless required by applicable law or agreed to in writing,
- * software distributed under the License is distributed on an
- * "AS IS" BASIS, WITHOUT WARRANTIES OR CONDITIONS OF ANY
- * KIND, either express or implied.  See the License for the
- * specific language governing permissions and limitations
- * under the License.
- */
-package org.apache.airavata.allocation.manager.db.utils;
-
-import org.dozer.DozerBeanMapper;
-import org.slf4j.Logger;
-import org.slf4j.LoggerFactory;
-
-public class ObjectMapperSingleton extends DozerBeanMapper{
-    private final static Logger logger = LoggerFactory.getLogger(ObjectMapperSingleton.class);
-
-    private static ObjectMapperSingleton instance;
-
-    private ObjectMapperSingleton(){}
-
-    public static ObjectMapperSingleton getInstance(){
-        if(instance == null)
-            instance = new ObjectMapperSingleton();
-        return instance;
-    }
-}
\ No newline at end of file
diff --git a/allocation-manager/airavata-allocation-manager/airavata-allocation-manager-stubs/src/main/java/org/apache/airavata/allocation/manager/models/Domain.java b/allocation-manager/airavata-allocation-manager/airavata-allocation-manager-stubs/src/main/java/org/apache/airavata/allocation/manager/models/Domain.java
deleted file mode 100644
index 2eccf05..0000000
--- a/allocation-manager/airavata-allocation-manager/airavata-allocation-manager-stubs/src/main/java/org/apache/airavata/allocation/manager/models/Domain.java
+++ /dev/null
@@ -1,5 +0,0 @@
-package org.apache.airavata.allocation.manager.models;
-
-public class Domain {
-// Placeholder file for Madrina to create
-}
diff --git a/bin/README.txt b/bin/README.txt
deleted file mode 100644
index a5d51f6..0000000
--- a/bin/README.txt
+++ /dev/null
@@ -1,16 +0,0 @@
-
-
-## Temporarily using ANT compile the Aurora Management code.
-## TODO: integrate with maven build system, instead of using ANT
-
-#In the following directory run the compilation command:
-airavata/modules/cloud/AuroraIntegration/src
-
-#Compilation command
-ant all
-
-#Run command
-## TODO: add the command to run and test the code
-
-## Add sample output that shows the Aurora code working
-
diff --git a/bin/build.xml b/bin/build.xml
deleted file mode 100644
index 5533336..0000000
--- a/bin/build.xml
+++ /dev/null
@@ -1,53 +0,0 @@
-<?xml version="1.0" encoding="utf-8"?>
-<project name="aurora" default="compile_all" basedir="..">
-
-  <property name="BUILD.compiler"       value="modern"/>
-  <property name="src"                  value="src"/>
-  <property name="BUILD"                value="BUILD"/>
-  <property name="classes"              value="${BUILD}/classes"/>
-
-
-  <target name="all" depends="compile_all"/>
-
-  <target name="compile_all"
-          depends="org"/>
-
-  <target name="clean">
-       <delete dir="${BUILD}"/>
-  </target>
-
-  <!-- Prepare target directories -->
-  <target name="prepare">
-        <mkdir dir="${BUILD}"/>
-        <mkdir dir="${classes}"/>
-  </target>
-
-
- <target name="jar">
-        <mkdir dir="${BUILD}/jar"/>
-        <jar destfile="${BUILD}/jar/auroraDriverl.jar" basedir="${BUILD}/classes">
-            <manifest>
-                <attribute name="Main-Class" value="org.apache.airavata.cloud.aurora.driver.AuroraAdminDriver"/>
-            </manifest>
-        </jar>
-    </target>
-
-
-
-  <!-- ** means all subdirectories as well -->
-  <!-- * means all files in the current directory -->
-  <!-- for just java files use *.java -->
-
-  <target name="org" depends="prepare">
-    <javac srcdir="${src}"
-           includes="org/**"
-           excludes="**/package.html"
-           destdir="${classes}"
-           classpath="${classes}"
-           debug="on"
-           optimize="on"
-           deprecation="off"/>
-  </target>
-
-
-</project>
diff --git a/bin/db.config b/bin/db.config
deleted file mode 100644
index b2c7b9d..0000000
--- a/bin/db.config
+++ /dev/null
@@ -1,24 +0,0 @@
-#
-# Licensed to the Apache Software Foundation (ASF) under one
-# or more contributor license agreements. See the NOTICE file
-# distributed with this work for additional information
-# regarding copyright ownership. The ASF licenses this file
-# to you under the Apache License, Version 2.0 (the
-# "License"); you may not use this file except in compliance
-# with the License. You may obtain a copy of the License at
-#
-# http://www.apache.org/licenses/LICENSE-2.0
-#
-# Unless required by applicable law or agreed to in writing,
-# software distributed under the License is distributed on an
-# "AS IS" BASIS, WITHOUT WARRANTIES OR CONDITIONS OF ANY
-# KIND, either express or implied. See the License for the
-# specific language governing permissions and limitations
-# under the License.
-#
-#database connection string
-
-##mySQL
-jdbcDriver=com.mysql.jdbc.Driver
-
-#jdbcUrl=jdbc:mysql://localhost:3306/wsnt?user=wsnt2&password=PASSWORD
\ No newline at end of file
diff --git a/bin/org/apache/airavata/jobsubmission/gram/errors.properties b/bin/org/apache/airavata/jobsubmission/gram/errors.properties
deleted file mode 100644
index 3e4382b..0000000
--- a/bin/org/apache/airavata/jobsubmission/gram/errors.properties
+++ /dev/null
@@ -1,176 +0,0 @@
-1 = Parameter not supported
-2 = The RSL length is greater than the maximum allowed
-3 = No resources available
-4 = Bad directory specified
-5 = The executable does not exist
-6 = Insufficient funds
-7 = Authentication with the remote server failed
-8 = Job cancelled by user
-9 = Job cancelled by system
-
-10 = Data transfer to the server failed
-11 = The stdin file does not exist
-12 = The connection to the server failed (check host and port)
-13 = The provided RSL 'maxtime' value is invalid (not an integer or must be greater than 0)
-14 = The provided RSL 'count' value is invalid (not an integer or must be greater than 0)
-15 = The job manager received an invalid RSL
-16 = Could not connect to job manager
-17 = The job failed when the job manager attempted to run it
-18 = Paradyn error
-19 = The provided RSL 'jobtype' value is invalid
-
-20 = The provided RSL 'myjob' value is invalid
-21 = The job manager failed to locate an internal script argument file
-22 = The job manager failed to create an internal script argument file
-23 = The job manager detected an invalid job state
-24 = The job manager detected an invalid script response
-25 = The job manager detected an invalid job state
-26 = The provided RSL 'jobtype' value is not supported by this job manager
-27 = Unimplemented
-28 = The job manager failed to create an internal script submission file
-29 = The job manager cannot find the user proxy
-
-30 = The job manager failed to open the user proxy
-31 = The job manager failed to cancel the job as requested
-32 = System memory allocation failed
-33 = The interprocess job communication initialization failed
-34 = The interprocess job communication setup failed
-35 = The provided RSL 'host count' value is invalid
-36 = One of the provided RSL parameters is unsupported
-37 = The provided RSL 'queue' parameter is invalid
-38 = The provided RSL 'project' parameter is invalid
-39 = The provided RSL string includes variables that could not be identified
-
-40 = The provided RSL 'environment' parameter is invalid
-41 = The provided RSL 'dryrun' parameter is invalid
-42 = The provided RSL is invalid (an empty string)
-43 = The job manager failed to stage the executable
-44 = The job manager failed to stage the stdin file
-45 = The requested job manager type is invalid
-46 = The provided RSL 'arguments' parameter is invalid
-47 = The gatekeeper failed to run the job manager
-48 = The provided RSL could not be properly parsed
-49 = There is a version mismatch between GRAM components
-
-50 = The provided RSL 'arguments' parameter is invalid
-51 = The provided RSL 'count' parameter is invalid
-52 = The provided RSL 'directory' parameter is invalid
-53 = The provided RSL 'dryrun' parameter is invalid
-54 = The provided RSL 'environment' parameter is invalid
-55 = The provided RSL 'executable' parameter is invalid
-56 = The provided RSL 'host_count' parameter is invalid
-57 = The provided RSL 'jobtype' parameter is invalid
-58 = The provided RSL 'maxtime' parameter is invalid
-59 = The provided RSL 'myjob' parameter is invalid
-
-60 = The provided RSL 'paradyn' parameter is invalid
-61 = The provided RSL 'project' parameter is invalid
-62 = The provided RSL 'queue' parameter is invalid
-63 = The provided RSL 'stderr' parameter is invalid
-64 = The provided RSL 'stdin' parameter is invalid
-65 = The provided RSL 'stdout' parameter is invalid
-66 = The job manager failed to locate an internal script
-67 = The job manager failed on the system call pipe()
-68 = The job manager failed on the system call fcntl()
-69 = The job manager failed to create the temporary stdout filename
-
-70 = The job manager failed to create the temporary stderr filename
-71 = The job manager failed on the system call fork()
-72 = The executable file permissions do not allow execution
-73 = The job manager failed to open stdout
-74 = The job manager failed to open stderr
-75 = The cache file could not be opened in order to relocate the user proxy
-76 = Cannot access cache files in ~/.globus/.gass_cache, check permissions, quota, and disk space
-77 = The job manager failed to insert the contact in the client contact list
-78 = The contact was not found in the job manager's client contact list
-79 = Connecting to the job manager failed.  Possible reasons: job terminated, invalid job contact, network problems, ...
-
-80 = The syntax of the job contact is invalid
-81 = The executable parameter in the RSL is undefined
-82 = The job manager service is misconfigured.  condor arch undefined
-83 = The job manager service is misconfigured.  condor os undefined
-84 = The provided RSL 'min_memory' parameter is invalid
-85 = The provided RSL 'max_memory' parameter is invalid
-86 = The RSL 'min_memory' value is not zero or greater
-87 = The RSL 'max_memory' value is not zero or greater
-88 = The creation of a HTTP message failed
-89 = Parsing incoming HTTP message failed
-
-90 = The packing of information into a HTTP message failed
-91 = An incoming HTTP message did not contain the expected information
-92 = The job manager does not support the service that the client requested
-93 = The gatekeeper failed to find the requested service
-94 = The jobmanager does not accept any new requests (shutting down)
-95 = The client failed to close the listener associated with the callback URL
-96 = The gatekeeper contact cannot be parsed
-97 = The job manager could not find the 'poe' command
-98 = The job manager could not find the 'mpirun' command
-99 = The provided RSL 'start_time' parameter is invalid"
-100 = The provided RSL 'reservation_handle' parameter is invalid
-
-101 = The provided RSL 'max_wall_time' parameter is invalid
-102 = The RSL 'max_wall_time' value is not zero or greater
-103 = The provided RSL 'max_cpu_time' parameter is invalid
-104 = The RSL 'max_cpu_time' value is not zero or greater
-105 = The job manager is misconfigured, a scheduler script is missing
-106 = The job manager is misconfigured, a scheduler script has invalid permissions
-107 = The job manager failed to signal the job
-108 = The job manager did not recognize/support the signal type
-109 = The job manager failed to get the job id from the local scheduler
-
-110 = The job manager is waiting for a commit signal
-111 = The job manager timed out while waiting for a commit signal
-112 = The provided RSL 'save_state' parameter is invalid
-113 = The provided RSL 'restart' parameter is invalid
-114 = The provided RSL 'two_phase' parameter is invalid
-115 = The RSL 'two_phase' value is not zero or greater
-116 = The provided RSL 'stdout_position' parameter is invalid
-117 = The RSL 'stdout_position' value is not zero or greater
-118 = The provided RSL 'stderr_position' parameter is invalid
-119 = The RSL 'stderr_position' value is not zero or greater
-
-120 = The job manager restart attempt failed
-121 = The job state file doesn't exist
-122 = Could not read the job state file
-123 = Could not write the job state file
-124 = The old job manager is still alive
-125 = The job manager state file TTL expired
-126 = It is unknown if the job was submitted
-127 = The provided RSL 'remote_io_url' parameter is invalid
-128 = Could not write the remote io url file
-129 = The standard output/error size is different
-
-130 = The job manager was sent a stop signal (job is still running)
-131 = The user proxy expired (job is still running)
-132 = The job was not submitted by original jobmanager
-133 = The job manager is not waiting for that commit signal
-134 = The provided RSL scheduler specific parameter is invalid
-135 = The job manager could not stage in a file
-136 = The scratch directory could not be created
-137 = The provided 'gass_cache' parameter is invalid
-138 = The RSL contains attributes which are not valid for job submission
-139 = The RSL contains attributes which are not valid for stdio update
-
-140 = The RSL contains attributes which are not valid for job restart
-141 = The provided RSL 'file_stage_in' parameter is invalid
-142 = The provided RSL 'file_stage_in_shared' parameter is invalid
-143 = The provided RSL 'file_stage_out' parameter is invalid
-144 = The provided RSL 'gass_cache' parameter is invalid
-145 = The provided RSL 'file_cleanup' parameter is invalid
-146 = The provided RSL 'scratch_dir' parameter is invalid
-147 = The provided scheduler-specific RSL parameter is invalid
-148 = A required RSL attribute was not defined in the RSL spec
-149 = The gass_cache attribute points to an invalid cache directory
-
-150 = The provided RSL 'save_state' parameter has an invalid value
-151 = The job manager could not open the RSL attribute validation file
-152 = The  job manager could not read the RSL attribute validation file
-153 = The provided RSL 'proxy_timeout' is invalid
-154 = The RSL 'proxy_timeout' value is not greater than zero
-155 = The job manager could not stage out a file
-156 = The job contact string does not match any which the job manager is handling
-157 = Proxy delegation failed
-158 = The job manager could not lock the state lock file
-
-1000 = Failed to start up callback handler
-1003 = Job contact not set

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