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From sma...@apache.org
Subject [10/12] airavata git commit: Merge remote-tracking branch 'origin/develop'
Date Fri, 11 Mar 2016 06:59:19 GMT
Merge remote-tracking branch 'origin/develop'


Project: http://git-wip-us.apache.org/repos/asf/airavata/repo
Commit: http://git-wip-us.apache.org/repos/asf/airavata/commit/630c7511
Tree: http://git-wip-us.apache.org/repos/asf/airavata/tree/630c7511
Diff: http://git-wip-us.apache.org/repos/asf/airavata/diff/630c7511

Branch: refs/heads/develop
Commit: 630c75116925e86a49b5e78f0e962c6ea567ead0
Parents: e6d6827 851117f
Author: smarru <smarru@apache.org>
Authored: Thu Mar 3 13:14:47 2016 -0500
Committer: smarru <smarru@apache.org>
Committed: Thu Mar 3 13:14:47 2016 -0500

----------------------------------------------------------------------
 .../java/org/apache/airavata/api/Airavata.java  |   2 +-
 .../application_deployment_model_types.cpp      |  22 +-
 .../application_deployment_model_types.h        |  22 +-
 .../airavata/compute_resource_model_types.cpp   | 546 ++++++++++---------
 .../lib/airavata/compute_resource_model_types.h |  11 +-
 .../lib/airavata/experiment_model_types.cpp     |  52 +-
 .../lib/airavata/experiment_model_types.h       |  12 +-
 .../airavata/parallelism_model_constants.cpp    |  34 ++
 .../lib/airavata/parallelism_model_constants.h  |  41 ++
 .../lib/airavata/parallelism_model_types.cpp    |  51 ++
 .../lib/airavata/parallelism_model_types.h      |  54 ++
 .../Model/AppCatalog/AppDeployment/Types.php    |  33 --
 .../Model/AppCatalog/ComputeResource/Types.php  | 221 +++++---
 .../Model/AppCatalog/Parallelism/Types.php      |  53 ++
 .../lib/Airavata/Model/Experiment/Types.php     |  67 ++-
 .../model/appcatalog/appdeployment/ttypes.py    |  43 +-
 .../model/appcatalog/computeresource/ttypes.py  | 138 +++--
 .../model/appcatalog/parallelism/__init__.py    |   1 +
 .../model/appcatalog/parallelism/constants.py   |  11 +
 .../model/appcatalog/parallelism/ttypes.py      |  60 ++
 .../apache/airavata/model/experiment/ttypes.py  |  61 ++-
 .../client/samples/RegisterSampleData.java      |   2 +-
 .../tools/RegisterOGCEUS3Application.java       |   2 +-
 .../tools/RegisterSampleApplications.java       |   2 +-
 .../tools/RegisterSampleApplicationsUtils.java  |   2 +-
 .../client/tools/RegisterUS3Application.java    |   2 +-
 .../apache/airavata/model/ComponentStatus.java  |   2 +-
 .../org/apache/airavata/model/EdgeModel.java    |   2 +-
 .../org/apache/airavata/model/NodeModel.java    |   2 +-
 .../org/apache/airavata/model/PortModel.java    |   2 +-
 .../apache/airavata/model/WorkflowModel.java    |   2 +-
 .../apache/airavata/model/WorkflowStatus.java   |   2 +-
 .../ApplicationDeploymentDescription.java       |  28 +-
 .../appdeployment/ApplicationModule.java        |   2 +-
 .../ApplicationParallelismType.java             |  90 ---
 .../appcatalog/appdeployment/CommandObject.java |   2 +-
 .../appcatalog/appdeployment/SetEnvPaths.java   |   2 +-
 .../ApplicationInterfaceDescription.java        |   2 +-
 .../appcatalog/computeresource/BatchQueue.java  |   2 +-
 .../computeresource/CloudJobSubmission.java     |   2 +-
 .../ComputeResourceDescription.java             | 218 ++++----
 .../computeresource/GlobusJobSubmission.java    |  34 +-
 .../computeresource/JobSubmissionInterface.java |   2 +-
 .../computeresource/LOCALSubmission.java        |   2 +-
 .../computeresource/ResourceJobManager.java     | 207 ++++++-
 .../computeresource/SSHJobSubmission.java       |  34 +-
 .../computeresource/UnicoreJobSubmission.java   |   2 +-
 .../ComputeResourcePreference.java              |   2 +-
 .../gatewayprofile/GatewayResourceProfile.java  |   2 +-
 .../gatewayprofile/StoragePreference.java       |   2 +-
 .../StorageResourceDescription.java             |   2 +-
 .../application/io/InputDataObjectType.java     |   2 +-
 .../application/io/OutputDataObjectType.java    |   2 +-
 .../airavata/model/commons/ErrorModel.java      |   2 +-
 .../model/commons/ValidationResults.java        |   2 +-
 .../airavata/model/commons/ValidatorResult.java |   2 +-
 .../data/movement/DataMovementInterface.java    |   2 +-
 .../data/movement/GridFTPDataMovement.java      |   2 +-
 .../model/data/movement/LOCALDataMovement.java  |   2 +-
 .../model/data/movement/SCPDataMovement.java    |   2 +-
 .../data/movement/UnicoreDataMovement.java      |   2 +-
 .../data/resource/DataReplicaLocationModel.java |   2 +-
 .../model/data/resource/DataResourceModel.java  |   2 +-
 .../model/error/AiravataClientException.java    |   2 +-
 .../model/error/AiravataSystemException.java    |   2 +-
 .../model/error/AuthenticationException.java    |   2 +-
 .../model/error/AuthorizationException.java     |   2 +-
 .../error/ExperimentNotFoundException.java      |   2 +-
 .../model/error/InvalidRequestException.java    |   2 +-
 .../model/error/LaunchValidationException.java  |   2 +-
 .../model/error/ProjectNotFoundException.java   |   2 +-
 .../airavata/model/error/TimedOutException.java |   2 +-
 .../airavata/model/error/ValidationResults.java |   2 +-
 .../airavata/model/error/ValidatorResult.java   |   2 +-
 .../model/experiment/ExperimentModel.java       | 208 +++++--
 .../model/experiment/ExperimentStatistics.java  |   2 +-
 .../experiment/ExperimentSummaryModel.java      |   2 +-
 .../experiment/UserConfigurationDataModel.java  |   2 +-
 .../org/apache/airavata/model/job/JobModel.java |   2 +-
 .../event/ExperimentStatusChangeEvent.java      |   2 +-
 .../model/messaging/event/JobIdentifier.java    |   2 +-
 .../messaging/event/JobStatusChangeEvent.java   |   2 +-
 .../event/JobStatusChangeRequestEvent.java      |   2 +-
 .../airavata/model/messaging/event/Message.java |   2 +-
 .../messaging/event/ProcessIdentifier.java      |   2 +-
 .../event/ProcessStatusChangeEvent.java         |   2 +-
 .../event/ProcessStatusChangeRequestEvent.java  |   2 +-
 .../messaging/event/ProcessSubmitEvent.java     |   2 +-
 .../messaging/event/ProcessTerminateEvent.java  |   2 +-
 .../model/messaging/event/TaskIdentifier.java   |   2 +-
 .../messaging/event/TaskOutputChangeEvent.java  |   2 +-
 .../messaging/event/TaskStatusChangeEvent.java  |   2 +-
 .../event/TaskStatusChangeRequestEvent.java     |   2 +-
 .../parallelism/ApplicationParallelismType.java |  90 +++
 .../airavata/model/process/ProcessModel.java    |   2 +-
 .../ComputationalResourceSchedulingModel.java   |   2 +-
 .../airavata/model/security/AuthzToken.java     |   2 +-
 .../airavata/model/status/ExperimentStatus.java |   2 +-
 .../apache/airavata/model/status/JobStatus.java |   2 +-
 .../airavata/model/status/ProcessStatus.java    |   2 +-
 .../airavata/model/status/TaskStatus.java       |   2 +-
 .../model/task/DataStagingTaskModel.java        |   2 +-
 .../model/task/EnvironmentSetupTaskModel.java   |   2 +-
 .../model/task/JobSubmissionTaskModel.java      |   2 +-
 .../airavata/model/task/MonitorTaskModel.java   |   2 +-
 .../apache/airavata/model/task/TaskModel.java   |   2 +-
 .../airavata/model/workspace/Gateway.java       |   2 +-
 .../apache/airavata/model/workspace/Group.java  |   2 +-
 .../airavata/model/workspace/Project.java       |   2 +-
 .../apache/airavata/model/workspace/User.java   |   2 +-
 .../apache/airavata/gfac/core/GFacUtils.java    |  30 +-
 .../impl/task/DefaultJobSubmissionTask.java     |   3 +-
 .../task/utils/bes/ApplicationProcessor.java    |   2 +-
 .../catalog/impl/ApplicationDeploymentImpl.java |   2 +-
 .../app/catalog/impl/ComputeResourceImpl.java   |  33 ++
 .../catalog/model/ParallelismPrefixCommand.java |  78 +++
 .../model/ParallelismPrefixCommand_PK.java      |  62 +++
 .../resources/AppCatAbstractResource.java       |   7 +
 .../ParallelismPrefixCommandResource.java       | 350 ++++++++++++
 .../app/catalog/util/AppCatalogJPAUtils.java    |  18 +
 .../catalog/util/AppCatalogResourceType.java    |   1 +
 .../util/AppCatalogThriftConversion.java        |  12 +
 .../catalog/impl/ExperimentRegistry.java        |   2 +
 .../experiment/catalog/model/Experiment.java    |  11 +
 .../catalog/resources/ExperimentResource.java   |  11 +
 .../experiment/catalog/resources/Utils.java     |   1 +
 .../utils/ThriftDataModelConversion.java        |   1 +
 .../src/main/resources/META-INF/persistence.xml |   1 +
 .../src/main/resources/appcatalog-derby.sql     |   9 +
 .../src/main/resources/appcatalog-mysql.sql     |   9 +
 .../src/main/resources/expcatalog-derby.sql     |   1 +
 .../src/main/resources/expcatalog-mysql.sql     |   1 +
 .../test-suite/multi-tenanted-airavata/pom.xml  |  10 +-
 .../ApplicationRegister.java                    |   2 +-
 .../application_deployment_model.thrift         |  28 +-
 .../app-catalog-models/parallelism_model.thrift |  54 ++
 .../experiment_model.thrift                     |  17 +-
 .../compute_resource_model.thrift               |   4 +-
 138 files changed, 2336 insertions(+), 1030 deletions(-)
----------------------------------------------------------------------



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