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From scnakand...@apache.org
Subject [19/24] airavata git commit: adding mongo base matadata catalog and replica catalog
Date Wed, 23 Dec 2015 18:00:08 GMT
http://git-wip-us.apache.org/repos/asf/airavata/blob/b61cfcd3/airavata-api/airavata-client-sdks/airavata-php-sdk/src/main/resources/lib/Thrift/Exception/TException.php
----------------------------------------------------------------------
diff --git a/airavata-api/airavata-client-sdks/airavata-php-sdk/src/main/resources/lib/Thrift/Exception/TException.php b/airavata-api/airavata-client-sdks/airavata-php-sdk/src/main/resources/lib/Thrift/Exception/TException.php
deleted file mode 100644
index 8e8cd28..0000000
--- a/airavata-api/airavata-client-sdks/airavata-php-sdk/src/main/resources/lib/Thrift/Exception/TException.php
+++ /dev/null
@@ -1,369 +0,0 @@
-<?php
-/*
- * Licensed to the Apache Software Foundation (ASF) under one
- * or more contributor license agreements. See the NOTICE file
- * distributed with this work for additional information
- * regarding copyright ownership. The ASF licenses this file
- * to you under the Apache License, Version 2.0 (the
- * "License"); you may not use this file except in compliance
- * with the License. You may obtain a copy of the License at
- *
- *   http://www.apache.org/licenses/LICENSE-2.0
- *
- * Unless required by applicable law or agreed to in writing,
- * software distributed under the License is distributed on an
- * "AS IS" BASIS, WITHOUT WARRANTIES OR CONDITIONS OF ANY
- * KIND, either express or implied. See the License for the
- * specific language governing permissions and limitations
- * under the License.
- *
- * @package thrift
- */
-
-namespace Thrift\Exception;
-
-use Thrift\Type\TType;
-use Thrift\Base\TBase;
-
-/**
- * NOTE(mcslee): This currently contains a ton of duplicated code from TBase
- * because we need to save CPU cycles and this is not yet in an extension.
- * Ideally we'd multiply-inherit TException from both Exception and Base, but
- * that's not possible in PHP and there are no modules either, so for now we
- * apologetically take a trip to HackTown.
- *
- * Can be called with standard Exception constructor (message, code) or with
- * Thrift Base object constructor (spec, vals).
- *
- * @param mixed $p1 Message (string) or type-spec (array)
- * @param mixed $p2 Code (integer) or values (array)
- */
-class TException extends \Exception {
-  function __construct($p1=null, $p2=0) {
-    if (is_array($p1) && is_array($p2)) {
-      $spec = $p1;
-      $vals = $p2;
-      foreach ($spec as $fid => $fspec) {
-        $var = $fspec['var'];
-        if (isset($vals[$var])) {
-          $this->$var = $vals[$var];
-        }
-      }
-    } else {
-      parent::__construct($p1, $p2);
-    }
-  }
-
-  static $tmethod = array(TType::BOOL   => 'Bool',
-                          TType::BYTE   => 'Byte',
-                          TType::I16    => 'I16',
-                          TType::I32    => 'I32',
-                          TType::I64    => 'I64',
-                          TType::DOUBLE => 'Double',
-                          TType::STRING => 'String');
-
-  private function _readMap(&$var, $spec, $input) {
-    $xfer = 0;
-    $ktype = $spec['ktype'];
-    $vtype = $spec['vtype'];
-    $kread = $vread = null;
-    if (isset(TBase::$tmethod[$ktype])) {
-      $kread = 'read'.TBase::$tmethod[$ktype];
-    } else {
-      $kspec = $spec['key'];
-    }
-    if (isset(TBase::$tmethod[$vtype])) {
-      $vread = 'read'.TBase::$tmethod[$vtype];
-    } else {
-      $vspec = $spec['val'];
-    }
-    $var = array();
-    $_ktype = $_vtype = $size = 0;
-    $xfer += $input->readMapBegin($_ktype, $_vtype, $size);
-    for ($i = 0; $i < $size; ++$i) {
-      $key = $val = null;
-      if ($kread !== null) {
-        $xfer += $input->$kread($key);
-      } else {
-        switch ($ktype) {
-        case TType::STRUCT:
-          $class = $kspec['class'];
-          $key = new $class();
-          $xfer += $key->read($input);
-          break;
-        case TType::MAP:
-          $xfer += $this->_readMap($key, $kspec, $input);
-          break;
-        case TType::LST:
-          $xfer += $this->_readList($key, $kspec, $input, false);
-          break;
-        case TType::SET:
-          $xfer += $this->_readList($key, $kspec, $input, true);
-          break;
-        }
-      }
-      if ($vread !== null) {
-        $xfer += $input->$vread($val);
-      } else {
-        switch ($vtype) {
-        case TType::STRUCT:
-          $class = $vspec['class'];
-          $val = new $class();
-          $xfer += $val->read($input);
-          break;
-        case TType::MAP:
-          $xfer += $this->_readMap($val, $vspec, $input);
-          break;
-        case TType::LST:
-          $xfer += $this->_readList($val, $vspec, $input, false);
-          break;
-        case TType::SET:
-          $xfer += $this->_readList($val, $vspec, $input, true);
-          break;
-        }
-      }
-      $var[$key] = $val;
-    }
-    $xfer += $input->readMapEnd();
-    return $xfer;
-  }
-
-  private function _readList(&$var, $spec, $input, $set=false) {
-    $xfer = 0;
-    $etype = $spec['etype'];
-    $eread = $vread = null;
-    if (isset(TBase::$tmethod[$etype])) {
-      $eread = 'read'.TBase::$tmethod[$etype];
-    } else {
-      $espec = $spec['elem'];
-    }
-    $var = array();
-    $_etype = $size = 0;
-    if ($set) {
-      $xfer += $input->readSetBegin($_etype, $size);
-    } else {
-      $xfer += $input->readListBegin($_etype, $size);
-    }
-    for ($i = 0; $i < $size; ++$i) {
-      $elem = null;
-      if ($eread !== null) {
-        $xfer += $input->$eread($elem);
-      } else {
-        $espec = $spec['elem'];
-        switch ($etype) {
-        case TType::STRUCT:
-          $class = $espec['class'];
-          $elem = new $class();
-          $xfer += $elem->read($input);
-          break;
-        case TType::MAP:
-          $xfer += $this->_readMap($elem, $espec, $input);
-          break;
-        case TType::LST:
-          $xfer += $this->_readList($elem, $espec, $input, false);
-          break;
-        case TType::SET:
-          $xfer += $this->_readList($elem, $espec, $input, true);
-          break;
-        }
-      }
-      if ($set) {
-        $var[$elem] = true;
-      } else {
-        $var []= $elem;
-      }
-    }
-    if ($set) {
-      $xfer += $input->readSetEnd();
-    } else {
-      $xfer += $input->readListEnd();
-    }
-    return $xfer;
-  }
-
-  protected function _read($class, $spec, $input) {
-    $xfer = 0;
-    $fname = null;
-    $ftype = 0;
-    $fid = 0;
-    $xfer += $input->readStructBegin($fname);
-    while (true) {
-      $xfer += $input->readFieldBegin($fname, $ftype, $fid);
-      if ($ftype == TType::STOP) {
-        break;
-      }
-      if (isset($spec[$fid])) {
-        $fspec = $spec[$fid];
-        $var = $fspec['var'];
-        if ($ftype == $fspec['type']) {
-          $xfer = 0;
-          if (isset(TBase::$tmethod[$ftype])) {
-            $func = 'read'.TBase::$tmethod[$ftype];
-            $xfer += $input->$func($this->$var);
-          } else {
-            switch ($ftype) {
-            case TType::STRUCT:
-              $class = $fspec['class'];
-              $this->$var = new $class();
-              $xfer += $this->$var->read($input);
-              break;
-            case TType::MAP:
-              $xfer += $this->_readMap($this->$var, $fspec, $input);
-              break;
-            case TType::LST:
-              $xfer += $this->_readList($this->$var, $fspec, $input, false);
-              break;
-            case TType::SET:
-              $xfer += $this->_readList($this->$var, $fspec, $input, true);
-              break;
-            }
-          }
-        } else {
-          $xfer += $input->skip($ftype);
-        }
-      } else {
-        $xfer += $input->skip($ftype);
-      }
-      $xfer += $input->readFieldEnd();
-    }
-    $xfer += $input->readStructEnd();
-    return $xfer;
-  }
-
-  private function _writeMap($var, $spec, $output) {
-    $xfer = 0;
-    $ktype = $spec['ktype'];
-    $vtype = $spec['vtype'];
-    $kwrite = $vwrite = null;
-    if (isset(TBase::$tmethod[$ktype])) {
-      $kwrite = 'write'.TBase::$tmethod[$ktype];
-    } else {
-      $kspec = $spec['key'];
-    }
-    if (isset(TBase::$tmethod[$vtype])) {
-      $vwrite = 'write'.TBase::$tmethod[$vtype];
-    } else {
-      $vspec = $spec['val'];
-    }
-    $xfer += $output->writeMapBegin($ktype, $vtype, count($var));
-    foreach ($var as $key => $val) {
-      if (isset($kwrite)) {
-        $xfer += $output->$kwrite($key);
-      } else {
-        switch ($ktype) {
-        case TType::STRUCT:
-          $xfer += $key->write($output);
-          break;
-        case TType::MAP:
-          $xfer += $this->_writeMap($key, $kspec, $output);
-          break;
-        case TType::LST:
-          $xfer += $this->_writeList($key, $kspec, $output, false);
-          break;
-        case TType::SET:
-          $xfer += $this->_writeList($key, $kspec, $output, true);
-          break;
-        }
-      }
-      if (isset($vwrite)) {
-        $xfer += $output->$vwrite($val);
-      } else {
-        switch ($vtype) {
-        case TType::STRUCT:
-          $xfer += $val->write($output);
-          break;
-        case TType::MAP:
-          $xfer += $this->_writeMap($val, $vspec, $output);
-          break;
-        case TType::LST:
-          $xfer += $this->_writeList($val, $vspec, $output, false);
-          break;
-        case TType::SET:
-          $xfer += $this->_writeList($val, $vspec, $output, true);
-          break;
-        }
-      }
-    }
-    $xfer += $output->writeMapEnd();
-    return $xfer;
-  }
-
-  private function _writeList($var, $spec, $output, $set=false) {
-    $xfer = 0;
-    $etype = $spec['etype'];
-    $ewrite = null;
-    if (isset(TBase::$tmethod[$etype])) {
-      $ewrite = 'write'.TBase::$tmethod[$etype];
-    } else {
-      $espec = $spec['elem'];
-    }
-    if ($set) {
-      $xfer += $output->writeSetBegin($etype, count($var));
-    } else {
-      $xfer += $output->writeListBegin($etype, count($var));
-    }
-    foreach ($var as $key => $val) {
-      $elem = $set ? $key : $val;
-      if (isset($ewrite)) {
-        $xfer += $output->$ewrite($elem);
-      } else {
-        switch ($etype) {
-        case TType::STRUCT:
-          $xfer += $elem->write($output);
-          break;
-        case TType::MAP:
-          $xfer += $this->_writeMap($elem, $espec, $output);
-          break;
-        case TType::LST:
-          $xfer += $this->_writeList($elem, $espec, $output, false);
-          break;
-        case TType::SET:
-          $xfer += $this->_writeList($elem, $espec, $output, true);
-          break;
-        }
-      }
-    }
-    if ($set) {
-      $xfer += $output->writeSetEnd();
-    } else {
-      $xfer += $output->writeListEnd();
-    }
-    return $xfer;
-  }
-
-  protected function _write($class, $spec, $output) {
-    $xfer = 0;
-    $xfer += $output->writeStructBegin($class);
-    foreach ($spec as $fid => $fspec) {
-      $var = $fspec['var'];
-      if ($this->$var !== null) {
-        $ftype = $fspec['type'];
-        $xfer += $output->writeFieldBegin($var, $ftype, $fid);
-        if (isset(TBase::$tmethod[$ftype])) {
-          $func = 'write'.TBase::$tmethod[$ftype];
-          $xfer += $output->$func($this->$var);
-        } else {
-          switch ($ftype) {
-          case TType::STRUCT:
-            $xfer += $this->$var->write($output);
-            break;
-          case TType::MAP:
-            $xfer += $this->_writeMap($this->$var, $fspec, $output);
-            break;
-          case TType::LST:
-            $xfer += $this->_writeList($this->$var, $fspec, $output, false);
-            break;
-          case TType::SET:
-            $xfer += $this->_writeList($this->$var, $fspec, $output, true);
-            break;
-          }
-        }
-        $xfer += $output->writeFieldEnd();
-      }
-    }
-    $xfer += $output->writeFieldStop();
-    $xfer += $output->writeStructEnd();
-    return $xfer;
-  }
-
-}

http://git-wip-us.apache.org/repos/asf/airavata/blob/b61cfcd3/airavata-api/airavata-client-sdks/airavata-php-sdk/src/main/resources/lib/Thrift/Exception/TProtocolException.php
----------------------------------------------------------------------
diff --git a/airavata-api/airavata-client-sdks/airavata-php-sdk/src/main/resources/lib/Thrift/Exception/TProtocolException.php b/airavata-api/airavata-client-sdks/airavata-php-sdk/src/main/resources/lib/Thrift/Exception/TProtocolException.php
deleted file mode 100644
index 98a8d9d..0000000
--- a/airavata-api/airavata-client-sdks/airavata-php-sdk/src/main/resources/lib/Thrift/Exception/TProtocolException.php
+++ /dev/null
@@ -1,48 +0,0 @@
-<?php
-/*
- * Licensed to the Apache Software Foundation (ASF) under one
- * or more contributor license agreements. See the NOTICE file
- * distributed with this work for additional information
- * regarding copyright ownership. The ASF licenses this file
- * to you under the Apache License, Version 2.0 (the
- * "License"); you may not use this file except in compliance
- * with the License. You may obtain a copy of the License at
- *
- *   http://www.apache.org/licenses/LICENSE-2.0
- *
- * Unless required by applicable law or agreed to in writing,
- * software distributed under the License is distributed on an
- * "AS IS" BASIS, WITHOUT WARRANTIES OR CONDITIONS OF ANY
- * KIND, either express or implied. See the License for the
- * specific language governing permissions and limitations
- * under the License.
- *
- * @package thrift.protocol
- * @author: rmarin (marin.radu@facebook.com)
- */
-
-namespace Thrift\Exception;
-
-use Thrift\Exception\TException;
-
-/**
- * Protocol module. Contains all the types and definitions needed to implement
- * a protocol encoder/decoder.
- *
- * @package thrift.protocol
- */
-
-/**
- * Protocol exceptions
- */
-class TProtocolException extends TException {
-  const UNKNOWN = 0;
-  const INVALID_DATA = 1;
-  const NEGATIVE_SIZE = 2;
-  const SIZE_LIMIT = 3;
-  const BAD_VERSION = 4;
-
-  function __construct($message=null, $code=0) {
-    parent::__construct($message, $code);
-  }
-}

http://git-wip-us.apache.org/repos/asf/airavata/blob/b61cfcd3/airavata-api/airavata-client-sdks/airavata-php-sdk/src/main/resources/lib/Thrift/Exception/TTransportException.php
----------------------------------------------------------------------
diff --git a/airavata-api/airavata-client-sdks/airavata-php-sdk/src/main/resources/lib/Thrift/Exception/TTransportException.php b/airavata-api/airavata-client-sdks/airavata-php-sdk/src/main/resources/lib/Thrift/Exception/TTransportException.php
deleted file mode 100644
index f467eb9..0000000
--- a/airavata-api/airavata-client-sdks/airavata-php-sdk/src/main/resources/lib/Thrift/Exception/TTransportException.php
+++ /dev/null
@@ -1,41 +0,0 @@
-<?php
-/*
- * Licensed to the Apache Software Foundation (ASF) under one
- * or more contributor license agreements. See the NOTICE file
- * distributed with this work for additional information
- * regarding copyright ownership. The ASF licenses this file
- * to you under the Apache License, Version 2.0 (the
- * "License"); you may not use this file except in compliance
- * with the License. You may obtain a copy of the License at
- *
- *   http://www.apache.org/licenses/LICENSE-2.0
- *
- * Unless required by applicable law or agreed to in writing,
- * software distributed under the License is distributed on an
- * "AS IS" BASIS, WITHOUT WARRANTIES OR CONDITIONS OF ANY
- * KIND, either express or implied. See the License for the
- * specific language governing permissions and limitations
- * under the License.
- *
- * @package thrift.transport
- */
-
-namespace Thrift\Exception;
-
-use Thrift\Exception\TException;
-
-/**
- * Transport exceptions
- */
-class TTransportException extends TException {
-
-  const UNKNOWN = 0;
-  const NOT_OPEN = 1;
-  const ALREADY_OPEN = 2;
-  const TIMED_OUT = 3;
-  const END_OF_FILE = 4;
-
-  function __construct($message=null, $code=0) {
-    parent::__construct($message, $code);
-  }
-}
\ No newline at end of file

http://git-wip-us.apache.org/repos/asf/airavata/blob/b61cfcd3/airavata-api/airavata-client-sdks/airavata-php-sdk/src/main/resources/lib/Thrift/Factory/TBinaryProtocolFactory.php
----------------------------------------------------------------------
diff --git a/airavata-api/airavata-client-sdks/airavata-php-sdk/src/main/resources/lib/Thrift/Factory/TBinaryProtocolFactory.php b/airavata-api/airavata-client-sdks/airavata-php-sdk/src/main/resources/lib/Thrift/Factory/TBinaryProtocolFactory.php
deleted file mode 100644
index 85da567..0000000
--- a/airavata-api/airavata-client-sdks/airavata-php-sdk/src/main/resources/lib/Thrift/Factory/TBinaryProtocolFactory.php
+++ /dev/null
@@ -1,43 +0,0 @@
-<?php
-/*
- * Licensed to the Apache Software Foundation (ASF) under one
- * or more contributor license agreements. See the NOTICE file
- * distributed with this work for additional information
- * regarding copyright ownership. The ASF licenses this file
- * to you under the Apache License, Version 2.0 (the
- * "License"); you may not use this file except in compliance
- * with the License. You may obtain a copy of the License at
- *
- *   http://www.apache.org/licenses/LICENSE-2.0
- *
- * Unless required by applicable law or agreed to in writing,
- * software distributed under the License is distributed on an
- * "AS IS" BASIS, WITHOUT WARRANTIES OR CONDITIONS OF ANY
- * KIND, either express or implied. See the License for the
- * specific language governing permissions and limitations
- * under the License.
- *
- * @package thrift.protocol
- */
-
-namespace Thrift\Factory;
-
-use Thrift\Factory\TProtocolFactory;
-use Thrift\Protocol\TBinaryProtocol;
-
-/**
- * Binary Protocol Factory
- */
-class TBinaryProtocolFactory implements TProtocolFactory {
-  private $strictRead_ = false;
-  private $strictWrite_ = false;
-
-  public function __construct($strictRead=false, $strictWrite=false) {
-    $this->strictRead_ = $strictRead;
-    $this->strictWrite_ = $strictWrite;
-  }
-
-  public function getProtocol($trans) {
-    return new TBinaryProtocol($trans, $this->strictRead_, $this->strictWrite_);
-  }
-}
\ No newline at end of file

http://git-wip-us.apache.org/repos/asf/airavata/blob/b61cfcd3/airavata-api/airavata-client-sdks/airavata-php-sdk/src/main/resources/lib/Thrift/Factory/TCompactProtocolFactory.php
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diff --git a/airavata-api/airavata-client-sdks/airavata-php-sdk/src/main/resources/lib/Thrift/Factory/TCompactProtocolFactory.php b/airavata-api/airavata-client-sdks/airavata-php-sdk/src/main/resources/lib/Thrift/Factory/TCompactProtocolFactory.php
deleted file mode 100644
index 9f972aa..0000000
--- a/airavata-api/airavata-client-sdks/airavata-php-sdk/src/main/resources/lib/Thrift/Factory/TCompactProtocolFactory.php
+++ /dev/null
@@ -1,39 +0,0 @@
-<?php
-/*
- * Licensed to the Apache Software Foundation (ASF) under one
- * or more contributor license agreements. See the NOTICE file
- * distributed with this work for additional information
- * regarding copyright ownership. The ASF licenses this file
- * to you under the Apache License, Version 2.0 (the
- * "License"); you may not use this file except in compliance
- * with the License. You may obtain a copy of the License at
- *
- *   http://www.apache.org/licenses/LICENSE-2.0
- *
- * Unless required by applicable law or agreed to in writing,
- * software distributed under the License is distributed on an
- * "AS IS" BASIS, WITHOUT WARRANTIES OR CONDITIONS OF ANY
- * KIND, either express or implied. See the License for the
- * specific language governing permissions and limitations
- * under the License.
- *
- * @package thrift.protocol
- */
-
-namespace Thrift\Factory;
-
-use Thrift\Factory\TProtocolFactory;
-use Thrift\Protocol\TCompactProtocol;
-
-/**
- * Compact Protocol Factory
- */
-class TCompactProtocolFactory implements TProtocolFactory {
-
-  public function __construct() {
-  }
-
-  public function getProtocol($trans) {
-    return new TCompactProtocol($trans);
-  }
-}
\ No newline at end of file

http://git-wip-us.apache.org/repos/asf/airavata/blob/b61cfcd3/airavata-api/airavata-client-sdks/airavata-php-sdk/src/main/resources/lib/Thrift/Factory/TJSONProtocolFactory.php
----------------------------------------------------------------------
diff --git a/airavata-api/airavata-client-sdks/airavata-php-sdk/src/main/resources/lib/Thrift/Factory/TJSONProtocolFactory.php b/airavata-api/airavata-client-sdks/airavata-php-sdk/src/main/resources/lib/Thrift/Factory/TJSONProtocolFactory.php
deleted file mode 100644
index 27e4391..0000000
--- a/airavata-api/airavata-client-sdks/airavata-php-sdk/src/main/resources/lib/Thrift/Factory/TJSONProtocolFactory.php
+++ /dev/null
@@ -1,41 +0,0 @@
-<?php
-/*
- * Licensed to the Apache Software Foundation (ASF) under one
- * or more contributor license agreements. See the NOTICE file
- * distributed with this work for additional information
- * regarding copyright ownership. The ASF licenses this file
- * to you under the Apache License, Version 2.0 (the
- * "License"); you may not use this file except in compliance
- * with the License. You may obtain a copy of the License at
- *
- *   http://www.apache.org/licenses/LICENSE-2.0
- *
- * Unless required by applicable law or agreed to in writing,
- * software distributed under the License is distributed on an
- * "AS IS" BASIS, WITHOUT WARRANTIES OR CONDITIONS OF ANY
- * KIND, either express or implied. See the License for the
- * specific language governing permissions and limitations
- * under the License.
- *
- * @package thrift.protocol
- */
-
-namespace Thrift\Factory;
-
-use Thrift\Factory\TProtocolFactory;
-use Thrift\Protocol\TJSONProtocol;
-
-/**
- * JSON Protocol Factory
- */
-class TJSONProtocolFactory implements TProtocolFactory
-{
-    public function __construct()
-    {
-    }
-
-    public function getProtocol($trans)
-    {
-        return new TJSONProtocol($trans);
-    }
-}

http://git-wip-us.apache.org/repos/asf/airavata/blob/b61cfcd3/airavata-api/airavata-client-sdks/airavata-php-sdk/src/main/resources/lib/Thrift/Factory/TProtocolFactory.php
----------------------------------------------------------------------
diff --git a/airavata-api/airavata-client-sdks/airavata-php-sdk/src/main/resources/lib/Thrift/Factory/TProtocolFactory.php b/airavata-api/airavata-client-sdks/airavata-php-sdk/src/main/resources/lib/Thrift/Factory/TProtocolFactory.php
deleted file mode 100644
index 6b322eb..0000000
--- a/airavata-api/airavata-client-sdks/airavata-php-sdk/src/main/resources/lib/Thrift/Factory/TProtocolFactory.php
+++ /dev/null
@@ -1,35 +0,0 @@
-<?php
-/*
- * Licensed to the Apache Software Foundation (ASF) under one
- * or more contributor license agreements. See the NOTICE file
- * distributed with this work for additional information
- * regarding copyright ownership. The ASF licenses this file
- * to you under the Apache License, Version 2.0 (the
- * "License"); you may not use this file except in compliance
- * with the License. You may obtain a copy of the License at
- *
- *   http://www.apache.org/licenses/LICENSE-2.0
- *
- * Unless required by applicable law or agreed to in writing,
- * software distributed under the License is distributed on an
- * "AS IS" BASIS, WITHOUT WARRANTIES OR CONDITIONS OF ANY
- * KIND, either express or implied. See the License for the
- * specific language governing permissions and limitations
- * under the License.
- *
- * @package thrift.protocol
- */
-
-namespace Thrift\Factory;
-
-/**
- * Protocol factory creates protocol objects from transports
- */
-interface TProtocolFactory {
-  /**
-   * Build a protocol from the base transport
-   *
-   * @return Thrift\Protocol\TProtocol protocol
-   */
-  public function getProtocol($trans);
-}

http://git-wip-us.apache.org/repos/asf/airavata/blob/b61cfcd3/airavata-api/airavata-client-sdks/airavata-php-sdk/src/main/resources/lib/Thrift/Factory/TStringFuncFactory.php
----------------------------------------------------------------------
diff --git a/airavata-api/airavata-client-sdks/airavata-php-sdk/src/main/resources/lib/Thrift/Factory/TStringFuncFactory.php b/airavata-api/airavata-client-sdks/airavata-php-sdk/src/main/resources/lib/Thrift/Factory/TStringFuncFactory.php
deleted file mode 100644
index edc3649..0000000
--- a/airavata-api/airavata-client-sdks/airavata-php-sdk/src/main/resources/lib/Thrift/Factory/TStringFuncFactory.php
+++ /dev/null
@@ -1,63 +0,0 @@
-<?php
-/*
- * Licensed to the Apache Software Foundation (ASF) under one
- * or more contributor license agreements. See the NOTICE file
- * distributed with this work for additional information
- * regarding copyright ownership. The ASF licenses this file
- * to you under the Apache License, Version 2.0 (the
- * "License"); you may not use this file except in compliance
- * with the License. You may obtain a copy of the License at
- *
- *   http://www.apache.org/licenses/LICENSE-2.0
- *
- * Unless required by applicable law or agreed to in writing,
- * software distributed under the License is distributed on an
- * "AS IS" BASIS, WITHOUT WARRANTIES OR CONDITIONS OF ANY
- * KIND, either express or implied. See the License for the
- * specific language governing permissions and limitations
- * under the License.
- *
- */
-
-namespace Thrift\Factory;
-
-use Thrift\StringFunc\Mbstring;
-use Thrift\StringFunc\Core;
-
-class TStringFuncFactory {
-    private static $_instance;
-
-    /**
-     * Get the Singleton instance of TStringFunc implementation that is
-     * compatible with the current system's mbstring.func_overload settings.
-     *
-     * @return TStringFunc
-     */
-    public static function create() {
-        if(!self::$_instance) {
-            self::_setInstance();
-        }
-
-        return self::$_instance;
-    }
-
-    private static function _setInstance() {
-        /**
-         * Cannot use str* functions for byte counting because multibyte
-         * characters will be read a single bytes.
-         *
-         * See: http://us.php.net/manual/en/mbstring.overload.php
-         */
-        if(ini_get('mbstring.func_overload') & 2) {
-            self::$_instance = new Mbstring();
-        }
-        /**
-         * mbstring is not installed or does not have function overloading
-         * of the str* functions enabled so use PHP core str* functions for
-         * byte counting.
-         */
-        else {
-            self::$_instance = new Core();
-        }
-    }
-}
\ No newline at end of file

http://git-wip-us.apache.org/repos/asf/airavata/blob/b61cfcd3/airavata-api/airavata-client-sdks/airavata-php-sdk/src/main/resources/lib/Thrift/Factory/TTransportFactory.php
----------------------------------------------------------------------
diff --git a/airavata-api/airavata-client-sdks/airavata-php-sdk/src/main/resources/lib/Thrift/Factory/TTransportFactory.php b/airavata-api/airavata-client-sdks/airavata-php-sdk/src/main/resources/lib/Thrift/Factory/TTransportFactory.php
deleted file mode 100644
index f3ae123..0000000
--- a/airavata-api/airavata-client-sdks/airavata-php-sdk/src/main/resources/lib/Thrift/Factory/TTransportFactory.php
+++ /dev/null
@@ -1,16 +0,0 @@
-<?php
-
-namespace Thrift\Factory;
-
-use Thrift\Transport\TTransport;
-
-class TTransportFactory {
-  /**
-   * @static
-   * @param TTransport $transport
-   * @return TTransport
-   */
-  public static function getTransport(TTransport $transport) {
-    return $transport;
-  }
-}

http://git-wip-us.apache.org/repos/asf/airavata/blob/b61cfcd3/airavata-api/airavata-client-sdks/airavata-php-sdk/src/main/resources/lib/Thrift/Protocol/JSON/BaseContext.php
----------------------------------------------------------------------
diff --git a/airavata-api/airavata-client-sdks/airavata-php-sdk/src/main/resources/lib/Thrift/Protocol/JSON/BaseContext.php b/airavata-api/airavata-client-sdks/airavata-php-sdk/src/main/resources/lib/Thrift/Protocol/JSON/BaseContext.php
deleted file mode 100644
index e96e504..0000000
--- a/airavata-api/airavata-client-sdks/airavata-php-sdk/src/main/resources/lib/Thrift/Protocol/JSON/BaseContext.php
+++ /dev/null
@@ -1,39 +0,0 @@
-<?php
-/*
- * Licensed to the Apache Software Foundation (ASF) under one
- * or more contributor license agreements. See the NOTICE file
- * distributed with this work for additional information
- * regarding copyright ownership. The ASF licenses this file
- * to you under the Apache License, Version 2.0 (the
- * "License"); you may not use this file except in compliance
- * with the License. You may obtain a copy of the License at
- *
- *   http://www.apache.org/licenses/LICENSE-2.0
- *
- * Unless required by applicable law or agreed to in writing,
- * software distributed under the License is distributed on an
- * "AS IS" BASIS, WITHOUT WARRANTIES OR CONDITIONS OF ANY
- * KIND, either express or implied. See the License for the
- * specific language governing permissions and limitations
- * under the License.
- *
- * @package thrift.protocol
- */
-
-namespace Thrift\Protocol\JSON;
-
-class BaseContext
-{
-    function escapeNum()
-    {
-        return false;
-    }
-
-    function write()
-    {
-    }
-
-    function read()
-    {
-    }
-}
\ No newline at end of file

http://git-wip-us.apache.org/repos/asf/airavata/blob/b61cfcd3/airavata-api/airavata-client-sdks/airavata-php-sdk/src/main/resources/lib/Thrift/Protocol/JSON/ListContext.php
----------------------------------------------------------------------
diff --git a/airavata-api/airavata-client-sdks/airavata-php-sdk/src/main/resources/lib/Thrift/Protocol/JSON/ListContext.php b/airavata-api/airavata-client-sdks/airavata-php-sdk/src/main/resources/lib/Thrift/Protocol/JSON/ListContext.php
deleted file mode 100644
index a2b75b1..0000000
--- a/airavata-api/airavata-client-sdks/airavata-php-sdk/src/main/resources/lib/Thrift/Protocol/JSON/ListContext.php
+++ /dev/null
@@ -1,52 +0,0 @@
-<?php
-/*
- * Licensed to the Apache Software Foundation (ASF) under one
- * or more contributor license agreements. See the NOTICE file
- * distributed with this work for additional information
- * regarding copyright ownership. The ASF licenses this file
- * to you under the Apache License, Version 2.0 (the
- * "License"); you may not use this file except in compliance
- * with the License. You may obtain a copy of the License at
- *
- *   http://www.apache.org/licenses/LICENSE-2.0
- *
- * Unless required by applicable law or agreed to in writing,
- * software distributed under the License is distributed on an
- * "AS IS" BASIS, WITHOUT WARRANTIES OR CONDITIONS OF ANY
- * KIND, either express or implied. See the License for the
- * specific language governing permissions and limitations
- * under the License.
- *
- * @package thrift.protocol
- */
-
-namespace Thrift\Protocol\JSON;
-
-use Thrift\Protocol\JSON\BaseContext;
-use Thrift\Protocol\TJSONProtocol;
-
-class ListContext extends BaseContext
-{
-    private $first_ = true;
-    private $p_;
-
-    public function __construct($p) {
-        $this->p_ = $p;
-    }
-
-    public function write() {
-        if ($this->first_) {
-            $this->first_ = false;
-        } else {
-            $this->p_->getTransport()->write(TJSONProtocol::COMMA);
-        }
-    }
-
-    public function read() {
-        if ($this->first_) {
-            $this->first_ = false;
-        } else {
-            $this->p_->readJSONSyntaxChar(TJSONProtocol::COMMA);
-        }
-    }
-}
\ No newline at end of file

http://git-wip-us.apache.org/repos/asf/airavata/blob/b61cfcd3/airavata-api/airavata-client-sdks/airavata-php-sdk/src/main/resources/lib/Thrift/Protocol/JSON/LookaheadReader.php
----------------------------------------------------------------------
diff --git a/airavata-api/airavata-client-sdks/airavata-php-sdk/src/main/resources/lib/Thrift/Protocol/JSON/LookaheadReader.php b/airavata-api/airavata-client-sdks/airavata-php-sdk/src/main/resources/lib/Thrift/Protocol/JSON/LookaheadReader.php
deleted file mode 100644
index 128b5fc..0000000
--- a/airavata-api/airavata-client-sdks/airavata-php-sdk/src/main/resources/lib/Thrift/Protocol/JSON/LookaheadReader.php
+++ /dev/null
@@ -1,54 +0,0 @@
-<?php
-/*
- * Licensed to the Apache Software Foundation (ASF) under one
- * or more contributor license agreements. See the NOTICE file
- * distributed with this work for additional information
- * regarding copyright ownership. The ASF licenses this file
- * to you under the Apache License, Version 2.0 (the
- * "License"); you may not use this file except in compliance
- * with the License. You may obtain a copy of the License at
- *
- *   http://www.apache.org/licenses/LICENSE-2.0
- *
- * Unless required by applicable law or agreed to in writing,
- * software distributed under the License is distributed on an
- * "AS IS" BASIS, WITHOUT WARRANTIES OR CONDITIONS OF ANY
- * KIND, either express or implied. See the License for the
- * specific language governing permissions and limitations
- * under the License.
- *
- * @package thrift.protocol
- */
-
-namespace Thrift\Protocol\JSON;
-
-class LookaheadReader
-{
-    private $hasData_ = false;
-    private $data_ = array();
-    private $p_;
-
-    public function __construct($p)
-    {
-        $this->p_ = $p;
-    }
-
-    public function read() {
-        if ($this->hasData_) {
-            $this->hasData_ = false;
-        } else {
-            $this->data_ = $this->p_->getTransport()->readAll(1);
-        }
-
-        return substr($this->data_, 0, 1);
-    }
-
-    public function peek() {
-        if (!$this->hasData_) {
-            $this->data_ = $this->p_->getTransport()->readAll(1);
-        }
-
-        $this->hasData_ = true;
-        return substr($this->data_, 0, 1);
-    }
-}
\ No newline at end of file

http://git-wip-us.apache.org/repos/asf/airavata/blob/b61cfcd3/airavata-api/airavata-client-sdks/airavata-php-sdk/src/main/resources/lib/Thrift/Protocol/JSON/PairContext.php
----------------------------------------------------------------------
diff --git a/airavata-api/airavata-client-sdks/airavata-php-sdk/src/main/resources/lib/Thrift/Protocol/JSON/PairContext.php b/airavata-api/airavata-client-sdks/airavata-php-sdk/src/main/resources/lib/Thrift/Protocol/JSON/PairContext.php
deleted file mode 100644
index 1c87dd3..0000000
--- a/airavata-api/airavata-client-sdks/airavata-php-sdk/src/main/resources/lib/Thrift/Protocol/JSON/PairContext.php
+++ /dev/null
@@ -1,60 +0,0 @@
-<?php
-/*
- * Licensed to the Apache Software Foundation (ASF) under one
- * or more contributor license agreements. See the NOTICE file
- * distributed with this work for additional information
- * regarding copyright ownership. The ASF licenses this file
- * to you under the Apache License, Version 2.0 (the
- * "License"); you may not use this file except in compliance
- * with the License. You may obtain a copy of the License at
- *
- *   http://www.apache.org/licenses/LICENSE-2.0
- *
- * Unless required by applicable law or agreed to in writing,
- * software distributed under the License is distributed on an
- * "AS IS" BASIS, WITHOUT WARRANTIES OR CONDITIONS OF ANY
- * KIND, either express or implied. See the License for the
- * specific language governing permissions and limitations
- * under the License.
- *
- * @package thrift.protocol
- */
-
-namespace Thrift\Protocol\JSON;
-
-use Thrift\Protocol\JSON\BaseContext;
-use Thrift\Protocol\TJSONProtocol;
-
-class PairContext extends BaseContext {
-    private $first_ = true;
-    private $colon_ = true;
-    private $p_ = null;
-
-    public function __construct($p) {
-        $this->p_ = $p;
-    }
-
-    public function write() {
-        if ($this->first_) {
-            $this->first_ = false;
-            $this->colon_ = true;
-        } else {
-            $this->p_->getTransport()->write($this->colon_ ? TJSONProtocol::COLON : TJSONProtocol::COMMA);
-            $this->colon_ = !$this->colon_;
-        }
-    }
-
-    public function read() {
-        if ($this->first_) {
-            $this->first_ = false;
-            $this->colon_ = true;
-        } else {
-            $this->p_->readJSONSyntaxChar($this->colon_ ? TJSONProtocol::COLON : TJSONProtocol::COMMA);
-            $this->colon_ = !$this->colon_;
-        }
-    }
-
-    public function escapeNum() {
-        return $this->colon_;
-    }
-}
\ No newline at end of file

http://git-wip-us.apache.org/repos/asf/airavata/blob/b61cfcd3/airavata-api/airavata-client-sdks/airavata-php-sdk/src/main/resources/lib/Thrift/Protocol/TBinaryProtocol.php
----------------------------------------------------------------------
diff --git a/airavata-api/airavata-client-sdks/airavata-php-sdk/src/main/resources/lib/Thrift/Protocol/TBinaryProtocol.php b/airavata-api/airavata-client-sdks/airavata-php-sdk/src/main/resources/lib/Thrift/Protocol/TBinaryProtocol.php
deleted file mode 100644
index b1fddac..0000000
--- a/airavata-api/airavata-client-sdks/airavata-php-sdk/src/main/resources/lib/Thrift/Protocol/TBinaryProtocol.php
+++ /dev/null
@@ -1,396 +0,0 @@
-<?php
-/*
- * Licensed to the Apache Software Foundation (ASF) under one
- * or more contributor license agreements. See the NOTICE file
- * distributed with this work for additional information
- * regarding copyright ownership. The ASF licenses this file
- * to you under the Apache License, Version 2.0 (the
- * "License"); you may not use this file except in compliance
- * with the License. You may obtain a copy of the License at
- *
- *   http://www.apache.org/licenses/LICENSE-2.0
- *
- * Unless required by applicable law or agreed to in writing,
- * software distributed under the License is distributed on an
- * "AS IS" BASIS, WITHOUT WARRANTIES OR CONDITIONS OF ANY
- * KIND, either express or implied. See the License for the
- * specific language governing permissions and limitations
- * under the License.
- *
- * @package thrift.protocol
- */
-
-namespace Thrift\Protocol;
-
-use Thrift\Protocol\TProtocol;
-use Thrift\Type\TType;
-use Thrift\Exception\TProtocolException;
-use Thrift\Factory\TStringFuncFactory;
-
-/**
- * Binary implementation of the Thrift protocol.
- *
- */
-class TBinaryProtocol extends TProtocol {
-
-  const VERSION_MASK = 0xffff0000;
-  const VERSION_1 = 0x80010000;
-
-  protected $strictRead_ = false;
-  protected $strictWrite_ = true;
-
-  public function __construct($trans, $strictRead=false, $strictWrite=true) {
-    parent::__construct($trans);
-    $this->strictRead_ = $strictRead;
-    $this->strictWrite_ = $strictWrite;
-  }
-
-  public function writeMessageBegin($name, $type, $seqid) {
-    if ($this->strictWrite_) {
-      $version = self::VERSION_1 | $type;
-      return
-        $this->writeI32($version) +
-        $this->writeString($name) +
-        $this->writeI32($seqid);
-    } else {
-      return
-        $this->writeString($name) +
-        $this->writeByte($type) +
-        $this->writeI32($seqid);
-    }
-  }
-
-  public function writeMessageEnd() {
-    return 0;
-  }
-
-  public function writeStructBegin($name) {
-    return 0;
-  }
-
-  public function writeStructEnd() {
-    return 0;
-  }
-
-  public function writeFieldBegin($fieldName, $fieldType, $fieldId) {
-    return
-      $this->writeByte($fieldType) +
-      $this->writeI16($fieldId);
-  }
-
-  public function writeFieldEnd() {
-    return 0;
-  }
-
-  public function writeFieldStop() {
-    return
-      $this->writeByte(TType::STOP);
-  }
-
-  public function writeMapBegin($keyType, $valType, $size) {
-    return
-      $this->writeByte($keyType) +
-      $this->writeByte($valType) +
-      $this->writeI32($size);
-  }
-
-  public function writeMapEnd() {
-    return 0;
-  }
-
-  public function writeListBegin($elemType, $size) {
-    return
-      $this->writeByte($elemType) +
-      $this->writeI32($size);
-  }
-
-  public function writeListEnd() {
-    return 0;
-  }
-
-  public function writeSetBegin($elemType, $size) {
-    return
-      $this->writeByte($elemType) +
-      $this->writeI32($size);
-  }
-
-  public function writeSetEnd() {
-    return 0;
-  }
-
-  public function writeBool($value) {
-    $data = pack('c', $value ? 1 : 0);
-    $this->trans_->write($data, 1);
-    return 1;
-  }
-
-  public function writeByte($value) {
-    $data = pack('c', $value);
-    $this->trans_->write($data, 1);
-    return 1;
-  }
-
-  public function writeI16($value) {
-    $data = pack('n', $value);
-    $this->trans_->write($data, 2);
-    return 2;
-  }
-
-  public function writeI32($value) {
-    $data = pack('N', $value);
-    $this->trans_->write($data, 4);
-    return 4;
-  }
-
-  public function writeI64($value) {
-    // If we are on a 32bit architecture we have to explicitly deal with
-    // 64-bit twos-complement arithmetic since PHP wants to treat all ints
-    // as signed and any int over 2^31 - 1 as a float
-    if (PHP_INT_SIZE == 4) {
-      $neg = $value < 0;
-
-      if ($neg) {
-        $value *= -1;
-      }
-
-      $hi = (int)($value / 4294967296);
-      $lo = (int)$value;
-
-      if ($neg) {
-        $hi = ~$hi;
-        $lo = ~$lo;
-        if (($lo & (int)0xffffffff) == (int)0xffffffff) {
-          $lo = 0;
-          $hi++;
-        } else {
-          $lo++;
-        }
-      }
-      $data = pack('N2', $hi, $lo);
-
-    } else {
-      $hi = $value >> 32;
-      $lo = $value & 0xFFFFFFFF;
-      $data = pack('N2', $hi, $lo);
-    }
-
-    $this->trans_->write($data, 8);
-    return 8;
-  }
-
-  public function writeDouble($value) {
-    $data = pack('d', $value);
-    $this->trans_->write(strrev($data), 8);
-    return 8;
-  }
-
-  public function writeString($value) {
-    $len = TStringFuncFactory::create()->strlen($value);
-    $result = $this->writeI32($len);
-    if ($len) {
-      $this->trans_->write($value, $len);
-    }
-    return $result + $len;
-  }
-
-  public function readMessageBegin(&$name, &$type, &$seqid) {
-    $result = $this->readI32($sz);
-    if ($sz < 0) {
-      $version = (int) ($sz & self::VERSION_MASK);
-      if ($version != (int) self::VERSION_1) {
-        throw new TProtocolException('Bad version identifier: '.$sz, TProtocolException::BAD_VERSION);
-      }
-      $type = $sz & 0x000000ff;
-      $result +=
-        $this->readString($name) +
-        $this->readI32($seqid);
-    } else {
-      if ($this->strictRead_) {
-        throw new TProtocolException('No version identifier, old protocol client?', TProtocolException::BAD_VERSION);
-      } else {
-        // Handle pre-versioned input
-        $name = $this->trans_->readAll($sz);
-        $result +=
-          $sz +
-          $this->readByte($type) +
-          $this->readI32($seqid);
-      }
-    }
-    return $result;
-  }
-
-  public function readMessageEnd() {
-    return 0;
-  }
-
-  public function readStructBegin(&$name) {
-    $name = '';
-    return 0;
-  }
-
-  public function readStructEnd() {
-    return 0;
-  }
-
-  public function readFieldBegin(&$name, &$fieldType, &$fieldId) {
-    $result = $this->readByte($fieldType);
-    if ($fieldType == TType::STOP) {
-      $fieldId = 0;
-      return $result;
-    }
-    $result += $this->readI16($fieldId);
-    return $result;
-  }
-
-  public function readFieldEnd() {
-    return 0;
-  }
-
-  public function readMapBegin(&$keyType, &$valType, &$size) {
-    return
-      $this->readByte($keyType) +
-      $this->readByte($valType) +
-      $this->readI32($size);
-  }
-
-  public function readMapEnd() {
-    return 0;
-  }
-
-  public function readListBegin(&$elemType, &$size) {
-    return
-      $this->readByte($elemType) +
-      $this->readI32($size);
-  }
-
-  public function readListEnd() {
-    return 0;
-  }
-
-  public function readSetBegin(&$elemType, &$size) {
-    return
-      $this->readByte($elemType) +
-      $this->readI32($size);
-  }
-
-  public function readSetEnd() {
-    return 0;
-  }
-
-  public function readBool(&$value) {
-    $data = $this->trans_->readAll(1);
-    $arr = unpack('c', $data);
-    $value = $arr[1] == 1;
-    return 1;
-  }
-
-  public function readByte(&$value) {
-    $data = $this->trans_->readAll(1);
-    $arr = unpack('c', $data);
-    $value = $arr[1];
-    return 1;
-  }
-
-  public function readI16(&$value) {
-    $data = $this->trans_->readAll(2);
-    $arr = unpack('n', $data);
-    $value = $arr[1];
-    if ($value > 0x7fff) {
-      $value = 0 - (($value - 1) ^ 0xffff);
-    }
-    return 2;
-  }
-
-  public function readI32(&$value) {
-    $data = $this->trans_->readAll(4);
-    $arr = unpack('N', $data);
-    $value = $arr[1];
-    if ($value > 0x7fffffff) {
-      $value = 0 - (($value - 1) ^ 0xffffffff);
-    }
-    return 4;
-  }
-
-  public function readI64(&$value) {
-    $data = $this->trans_->readAll(8);
-
-    $arr = unpack('N2', $data);
-
-    // If we are on a 32bit architecture we have to explicitly deal with
-    // 64-bit twos-complement arithmetic since PHP wants to treat all ints
-    // as signed and any int over 2^31 - 1 as a float
-    if (PHP_INT_SIZE == 4) {
-
-      $hi = $arr[1];
-      $lo = $arr[2];
-      $isNeg = $hi  < 0;
-
-      // Check for a negative
-      if ($isNeg) {
-        $hi = ~$hi & (int)0xffffffff;
-        $lo = ~$lo & (int)0xffffffff;
-
-        if ($lo == (int)0xffffffff) {
-          $hi++;
-          $lo = 0;
-        } else {
-          $lo++;
-        }
-      }
-
-      // Force 32bit words in excess of 2G to pe positive - we deal wigh sign
-      // explicitly below
-
-      if ($hi & (int)0x80000000) {
-        $hi &= (int)0x7fffffff;
-        $hi += 0x80000000;
-      }
-
-      if ($lo & (int)0x80000000) {
-        $lo &= (int)0x7fffffff;
-        $lo += 0x80000000;
-      }
-
-      $value = $hi * 4294967296 + $lo;
-
-      if ($isNeg) {
-        $value = 0 - $value;
-      }
-    } else {
-
-      // Upcast negatives in LSB bit
-      if ($arr[2] & 0x80000000) {
-        $arr[2] = $arr[2] & 0xffffffff;
-      }
-
-      // Check for a negative
-      if ($arr[1] & 0x80000000) {
-        $arr[1] = $arr[1] & 0xffffffff;
-        $arr[1] = $arr[1] ^ 0xffffffff;
-        $arr[2] = $arr[2] ^ 0xffffffff;
-        $value = 0 - $arr[1]*4294967296 - $arr[2] - 1;
-      } else {
-        $value = $arr[1]*4294967296 + $arr[2];
-      }
-    }
-
-    return 8;
-  }
-
-  public function readDouble(&$value) {
-    $data = strrev($this->trans_->readAll(8));
-    $arr = unpack('d', $data);
-    $value = $arr[1];
-    return 8;
-  }
-
-  public function readString(&$value) {
-    $result = $this->readI32($len);
-    if ($len) {
-      $value = $this->trans_->readAll($len);
-    } else {
-      $value = '';
-    }
-    return $result + $len;
-  }
-}

http://git-wip-us.apache.org/repos/asf/airavata/blob/b61cfcd3/airavata-api/airavata-client-sdks/airavata-php-sdk/src/main/resources/lib/Thrift/Protocol/TBinaryProtocolAccelerated.php
----------------------------------------------------------------------
diff --git a/airavata-api/airavata-client-sdks/airavata-php-sdk/src/main/resources/lib/Thrift/Protocol/TBinaryProtocolAccelerated.php b/airavata-api/airavata-client-sdks/airavata-php-sdk/src/main/resources/lib/Thrift/Protocol/TBinaryProtocolAccelerated.php
deleted file mode 100644
index 392aa21..0000000
--- a/airavata-api/airavata-client-sdks/airavata-php-sdk/src/main/resources/lib/Thrift/Protocol/TBinaryProtocolAccelerated.php
+++ /dev/null
@@ -1,47 +0,0 @@
-<?php
-/*
- * Licensed to the Apache Software Foundation (ASF) under one
- * or more contributor license agreements. See the NOTICE file
- * distributed with this work for additional information
- * regarding copyright ownership. The ASF licenses this file
- * to you under the Apache License, Version 2.0 (the
- * "License"); you may not use this file except in compliance
- * with the License. You may obtain a copy of the License at
- *
- *   http://www.apache.org/licenses/LICENSE-2.0
- *
- * Unless required by applicable law or agreed to in writing,
- * software distributed under the License is distributed on an
- * "AS IS" BASIS, WITHOUT WARRANTIES OR CONDITIONS OF ANY
- * KIND, either express or implied. See the License for the
- * specific language governing permissions and limitations
- * under the License.
- *
- * @package thrift.protocol
- */
-
-namespace Thrift\Protocol;
-
-use Thrift\Protocol\TBinaryProtocol;
-use Thrift\Transport\TBufferedTransport;
-
-/**
- * Accelerated binary protocol: used in conjunction with the thrift_protocol
- * extension for faster deserialization
- */
-class TBinaryProtocolAccelerated extends TBinaryProtocol {
-  public function __construct($trans, $strictRead=false, $strictWrite=true) {
-    // If the transport doesn't implement putBack, wrap it in a
-    // TBufferedTransport (which does)
-    if (!method_exists($trans, 'putBack')) {
-      $trans = new TBufferedTransport($trans);
-    }
-    parent::__construct($trans, $strictRead, $strictWrite);
-  }
-  public function isStrictRead() {
-    return $this->strictRead_;
-  }
-  public function isStrictWrite() {
-    return $this->strictWrite_;
-  }
-}
\ No newline at end of file

http://git-wip-us.apache.org/repos/asf/airavata/blob/b61cfcd3/airavata-api/airavata-client-sdks/airavata-php-sdk/src/main/resources/lib/Thrift/Protocol/TCompactProtocol.php
----------------------------------------------------------------------
diff --git a/airavata-api/airavata-client-sdks/airavata-php-sdk/src/main/resources/lib/Thrift/Protocol/TCompactProtocol.php b/airavata-api/airavata-client-sdks/airavata-php-sdk/src/main/resources/lib/Thrift/Protocol/TCompactProtocol.php
deleted file mode 100644
index e637a59..0000000
--- a/airavata-api/airavata-client-sdks/airavata-php-sdk/src/main/resources/lib/Thrift/Protocol/TCompactProtocol.php
+++ /dev/null
@@ -1,669 +0,0 @@
-<?php
-/*
- * Licensed to the Apache Software Foundation (ASF) under one
- * or more contributor license agreements. See the NOTICE file
- * distributed with this work for additional information
- * regarding copyright ownership. The ASF licenses this file
- * to you under the Apache License, Version 2.0 (the
- * "License"); you may not use this file except in compliance
- * with the License. You may obtain a copy of the License at
- *
- *   http://www.apache.org/licenses/LICENSE-2.0
- *
- * Unless required by applicable law or agreed to in writing,
- * software distributed under the License is distributed on an
- * "AS IS" BASIS, WITHOUT WARRANTIES OR CONDITIONS OF ANY
- * KIND, either express or implied. See the License for the
- * specific language governing permissions and limitations
- * under the License.
- *
- * @package thrift.protocol
- */
-
-namespace Thrift\Protocol;
-
-use Thrift\Protocol\TProtocol;
-use Thrift\Type\TType;
-use Thrift\Exception\TProtocolException;
-use Thrift\Factory\TStringFuncFactory;
-
-/**
- * Compact implementation of the Thrift protocol.
- *
- */
-class TCompactProtocol extends TProtocol {
-
-  const COMPACT_STOP = 0x00;
-  const COMPACT_TRUE = 0x01;
-  const COMPACT_FALSE = 0x02;
-  const COMPACT_BYTE = 0x03;
-  const COMPACT_I16 = 0x04;
-  const COMPACT_I32 = 0x05;
-  const COMPACT_I64 = 0x06;
-  const COMPACT_DOUBLE = 0x07;
-  const COMPACT_BINARY = 0x08;
-  const COMPACT_LIST = 0x09;
-  const COMPACT_SET = 0x0A;
-  const COMPACT_MAP = 0x0B;
-  const COMPACT_STRUCT = 0x0C;
-
-  const STATE_CLEAR = 0;
-  const STATE_FIELD_WRITE = 1;
-  const STATE_VALUE_WRITE = 2;
-  const STATE_CONTAINER_WRITE = 3;
-  const STATE_BOOL_WRITE = 4;
-  const STATE_FIELD_READ = 5;
-  const STATE_CONTAINER_READ = 6;
-  const STATE_VALUE_READ = 7;
-  const STATE_BOOL_READ = 8;
-
-  const VERSION_MASK = 0x1f;
-  const VERSION = 1;
-  const PROTOCOL_ID = 0x82;
-  const TYPE_MASK = 0xe0;
-  const TYPE_SHIFT_AMOUNT = 5;
-
-  protected static $ctypes = array(
-    TType::STOP => TCompactProtocol::COMPACT_STOP,
-    TType::BOOL => TCompactProtocol::COMPACT_TRUE, // used for collection
-    TType::BYTE => TCompactProtocol::COMPACT_BYTE,
-    TType::I16 => TCompactProtocol::COMPACT_I16,
-    TType::I32 => TCompactProtocol::COMPACT_I32,
-    TType::I64 => TCompactProtocol::COMPACT_I64,
-    TType::DOUBLE => TCompactProtocol::COMPACT_DOUBLE,
-    TType::STRING => TCompactProtocol::COMPACT_BINARY,
-    TType::STRUCT => TCompactProtocol::COMPACT_STRUCT,
-    TType::LST => TCompactProtocol::COMPACT_LIST,
-    TType::SET => TCompactProtocol::COMPACT_SET,
-    TType::MAP => TCompactProtocol::COMPACT_MAP,
-  );
-
-  protected static $ttypes = array(
-    TCompactProtocol::COMPACT_STOP => TType::STOP ,
-    TCompactProtocol::COMPACT_TRUE => TType::BOOL, // used for collection
-    TCompactProtocol::COMPACT_FALSE => TType::BOOL,
-    TCompactProtocol::COMPACT_BYTE => TType::BYTE,
-    TCompactProtocol::COMPACT_I16 => TType::I16,
-    TCompactProtocol::COMPACT_I32 => TType::I32,
-    TCompactProtocol::COMPACT_I64 => TType::I64,
-    TCompactProtocol::COMPACT_DOUBLE => TType::DOUBLE,
-    TCompactProtocol::COMPACT_BINARY => TType::STRING,
-    TCompactProtocol::COMPACT_STRUCT => TType::STRUCT,
-    TCompactProtocol::COMPACT_LIST => TType::LST,
-    TCompactProtocol::COMPACT_SET => TType::SET,
-    TCompactProtocol::COMPACT_MAP => TType::MAP,
-  );
-
-  protected $state = TCompactProtocol::STATE_CLEAR;
-  protected $lastFid = 0;
-  protected $boolFid = null;
-  protected $boolValue = null;
-  protected $structs = array();
-  protected $containers = array();
-
-  // Some varint / zigzag helper methods
-  public function toZigZag($n, $bits) {
-    return ($n << 1) ^ ($n >> ($bits - 1));
-  }
-
-  public function fromZigZag($n) {
-    return ($n >> 1) ^ -($n & 1);
-  }
-
-  public function getVarint($data) {
-    $out = "";
-    while (true) {
-      if (($data & ~0x7f) === 0) {
-        $out .= chr($data);
-        break;
-      } else {
-        $out .= chr(($data & 0xff) | 0x80);
-        $data = $data >> 7;
-      }
-    }
-    return $out;
-  }
-
-  public function writeVarint($data) {
-    $out = $this->getVarint($data);
-    $result = TStringFuncFactory::create()->strlen($out);
-    $this->trans_->write($out, $result);
-    return $result;
-  }
-
-  public function readVarint(&$result) {
-    $idx = 0;
-    $shift = 0;
-    $result = 0;
-    while (true) {
-      $x = $this->trans_->readAll(1);
-      $arr = unpack('C', $x);
-      $byte = $arr[1];
-      $idx += 1;
-      $result |= ($byte & 0x7f) << $shift;
-      if (($byte >> 7) === 0) {
-        return $idx;
-      }
-      $shift += 7;
-    }
-
-    return $idx;
-  }
-
-  public function __construct($trans) {
-    parent::__construct($trans);
-  }
-
-  public function writeMessageBegin($name, $type, $seqid) {
-    $written =
-      $this->writeUByte(TCompactProtocol::PROTOCOL_ID) +
-      $this->writeUByte(TCompactProtocol::VERSION |
-                        ($type << TCompactProtocol::TYPE_SHIFT_AMOUNT)) +
-      $this->writeVarint($seqid) +
-      $this->writeString($name);
-    $this->state = TCompactProtocol::STATE_VALUE_WRITE;
-    return $written;
-  }
-
-  public function writeMessageEnd() {
-    $this->state = TCompactProtocol::STATE_CLEAR;
-    return 0;
-  }
-
-  public function writeStructBegin($name) {
-    $this->structs[] = array($this->state, $this->lastFid);
-    $this->state = TCompactProtocol::STATE_FIELD_WRITE;
-    $this->lastFid = 0;
-    return 0;
-  }
-
-  public function writeStructEnd() {
-    $old_values = array_pop($this->structs);
-    $this->state = $old_values[0];
-    $this->lastFid = $old_values[1];
-    return 0;
-  }
-
-  public function writeFieldStop() {
-    return $this->writeByte(0);
-  }
-
-  public function writeFieldHeader($type, $fid) {
-    $written = 0;
-    $delta = $fid - $this->lastFid;
-    if (0 < $delta && $delta <= 15) {
-      $written = $this->writeUByte(($delta << 4) | $type);
-    } else {
-      $written = $this->writeByte($type) +
-        $this->writeI16($fid);
-    }
-    $this->lastFid = $fid;
-    return $written;
-  }
-
-  public function writeFieldBegin($field_name, $field_type, $field_id) {
-    if ($field_type == TTYPE::BOOL) {
-      $this->state = TCompactProtocol::STATE_BOOL_WRITE;
-      $this->boolFid = $field_id;
-      return 0;
-    } else {
-      $this->state = TCompactProtocol::STATE_VALUE_WRITE;
-      return $this->writeFieldHeader(self::$ctypes[$field_type], $field_id);
-    }
-  }
-
-  public function writeFieldEnd() {
-    $this->state = TCompactProtocol::STATE_FIELD_WRITE;
-    return 0;
-  }
-
-  public function writeCollectionBegin($etype, $size) {
-    $written = 0;
-    if ($size <= 14) {
-      $written = $this->writeUByte($size << 4 |
-                                    self::$ctypes[$etype]);
-    } else {
-      $written = $this->writeUByte(0xf0 |
-                                   self::$ctypes[$etype]) +
-        $this->writeVarint($size);
-    }
-    $this->containers[] = $this->state;
-    $this->state = TCompactProtocol::STATE_CONTAINER_WRITE;
-
-    return $written;
-  }
-
-  public function writeMapBegin($key_type, $val_type, $size) {
-    $written = 0;
-    if ($size == 0) {
-      $written = $this->writeByte(0);
-    } else {
-      $written = $this->writeVarint($size) +
-        $this->writeUByte(self::$ctypes[$key_type] << 4 |
-                          self::$ctypes[$val_type]);
-    }
-    $this->containers[] = $this->state;
-    return $written;
-  }
-
-  public function writeCollectionEnd() {
-    $this->state = array_pop($this->containers);
-    return 0;
-  }
-
-  public function writeMapEnd() {
-    return $this->writeCollectionEnd();
-  }
-
-  public function writeListBegin($elem_type, $size) {
-    return $this->writeCollectionBegin($elem_type, $size);
-  }
-
-  public function writeListEnd() {
-    return $this->writeCollectionEnd();
-  }
-
-  public function writeSetBegin($elem_type, $size) {
-    return $this->writeCollectionBegin($elem_type, $size);
-  }
-
-  public function writeSetEnd() {
-    return $this->writeCollectionEnd();
-  }
-
-  public function writeBool($value) {
-    if ($this->state == TCompactProtocol::STATE_BOOL_WRITE) {
-      $ctype = TCompactProtocol::COMPACT_FALSE;
-      if ($value) {
-        $ctype = TCompactProtocol::COMPACT_TRUE;
-      }
-      return $this->writeFieldHeader($ctype, $this->boolFid);
-    } else if ($this->state == TCompactProtocol::STATE_CONTAINER_WRITE) {
-      return $this->writeByte($value ? 1 : 0);
-    } else {
-      throw new TProtocolException('Invalid state in compact protocol');
-    }
-  }
-
-  public function writeByte($value) {
-    $data = pack('c', $value);
-    $this->trans_->write($data, 1);
-    return 1;
-  }
-
-  public function writeUByte($byte) {
-    $this->trans_->write(pack('C', $byte), 1);
-    return 1;
-  }
-
-  public function writeI16($value) {
-    $thing = $this->toZigZag($value, 16);
-    return $this->writeVarint($thing);
-  }
-
-  public function writeI32($value) {
-    $thing = $this->toZigZag($value, 32);
-    return $this->writeVarint($thing);
-  }
-
-  public function writeDouble($value) {
-    $data = pack('d', $value);
-    $this->trans_->write(strrev($data), 8);
-    return 8;
-  }
-
-  public function writeString($value) {
-    $len = TStringFuncFactory::create()->strlen($value);
-    $result = $this->writeVarint($len);
-    if ($len) {
-      $this->trans_->write($value, $len);
-    }
-    return $result + $len;
-  }
-
-  public function readFieldBegin(&$name, &$field_type, &$field_id) {
-    $result = $this->readUByte($field_type);
-
-    if (($field_type & 0x0f) == TType::STOP) {
-      $field_id = 0;
-      return $result;
-    }
-    $delta = $field_type >> 4;
-    if ($delta == 0) {
-      $result += $this->readI16($field_id);
-    } else {
-      $field_id = $this->lastFid + $delta;
-    }
-    $this->lastFid = $field_id;
-    $field_type = $this->getTType($field_type & 0x0f);
-    if ($field_type == TCompactProtocol::COMPACT_TRUE) {
-      $this->state = TCompactProtocol::STATE_BOOL_READ;
-      $this->boolValue = true;
-    } else if ($field_type == TCompactProtocol::COMPACT_FALSE) {
-      $this->state = TCompactProtocol::STATE_BOOL_READ;
-      $this->boolValue = false;
-    } else {
-      $this->state = TCompactProtocol::STATE_VALUE_READ;
-    }
-    return $result;
-  }
-
-  public function readFieldEnd() {
-    $this->state = TCompactProtocol::STATE_FIELD_READ;
-    return 0;
-  }
-
-  public function readUByte(&$value) {
-    $data = $this->trans_->readAll(1);
-    $arr = unpack('C', $data);
-    $value = $arr[1];
-    return 1;
-  }
-
-  public function readByte(&$value) {
-    $data = $this->trans_->readAll(1);
-    $arr = unpack('c', $data);
-    $value = $arr[1];
-    return 1;
-  }
-
-  public function readZigZag(&$value) {
-    $result = $this->readVarint($value);
-    $value = $this->fromZigZag($value);
-    return $result;
-  }
-
-  public function readMessageBegin(&$name, &$type, &$seqid) {
-    $protoId = 0;
-    $result = $this->readUByte($protoId);
-    if ($protoId != TCompactProtocol::PROTOCOL_ID) {
-      throw new TProtocolException('Bad protocol id in TCompact message');
-    }
-    $verType = 0;
-    $result += $this->readUByte($verType);
-    $type = ($verType & TCompactProtocol::TYPE_MASK) >>
-      TCompactProtocol::TYPE_SHIFT_AMOUNT;
-    $version = $verType & TCompactProtocol::VERSION_MASK;
-    if ($version != TCompactProtocol::VERSION) {
-      throw new TProtocolException('Bad version in TCompact message');
-    }
-    $result += $this->readVarint($seqId);
-    $name += $this->readString($name);
-
-    return $result;
-  }
-
-  public function readMessageEnd() {
-    return 0;
-  }
-
-  public function readStructBegin(&$name) {
-    $name = ''; // unused
-    $this->structs[] = array($this->state, $this->lastFid);
-    $this->state = TCompactProtocol::STATE_FIELD_READ;
-    $this->lastFid = 0;
-    return 0;
-  }
-
-  public function readStructEnd() {
-    $last = array_pop($this->structs);
-    $this->state = $last[0];
-    $this->lastFid = $last[1];
-    return 0;
-  }
-
-  public function readCollectionBegin(&$type, &$size) {
-    $sizeType = 0;
-    $result = $this->readUByte($sizeType);
-    $size = $sizeType >> 4;
-    $type = $this->getTType($sizeType);
-    if ($size == 15) {
-      $result += $this->readVarint($size);
-    }
-    $this->containers[] = $this->state;
-    $this->state = TCompactProtocol::STATE_CONTAINER_READ;
-
-    return $result;
-  }
-
-  public function readMapBegin(&$key_type, &$val_type, &$size) {
-    $result = $this->readVarint($size);
-    $types = 0;
-    if ($size > 0) {
-      $result += $this->readUByte($types);
-    }
-    $val_type = $this->getTType($types);
-    $key_type = $this->getTType($types >> 4);
-    $this->containers[] = $this->state;
-    $this->state = TCompactProtocol::STATE_CONTAINER_READ;
-
-    return $result;
-  }
-
-  public function readCollectionEnd() {
-    $this->state = array_pop($this->containers);
-    return 0;
-  }
-
-  public function readMapEnd() {
-    return $this->readCollectionEnd();
-  }
-
-  public function readListBegin(&$elem_type, &$size) {
-    return $this->readCollectionBegin($elem_type, $size);
-  }
-
-  public function readListEnd() {
-    return $this->readCollectionEnd();
-  }
-
-  public function readSetBegin(&$elem_type, &$size) {
-    return $this->readCollectionBegin($elem_type, $size);
-  }
-
-  public function readSetEnd() {
-    return $this->readCollectionEnd();
-  }
-
-  public function readBool(&$value) {
-    if ($this->state == TCompactProtocol::STATE_BOOL_READ) {
-      $value = $this->boolValue;
-      return 0;
-    } else if ($this->state == TCompactProtocol::STATE_CONTAINER_READ) {
-      return $this->readByte($value);
-    } else {
-      throw new TProtocolException('Invalid state in compact protocol');
-    }
-  }
-
-  public function readI16(&$value) {
-    return $this->readZigZag($value);
-  }
-
-  public function readI32(&$value) {
-    return $this->readZigZag($value);
-  }
-
-  public function readDouble(&$value) {
-    $data = strrev($this->trans_->readAll(8));
-    $arr = unpack('d', $data);
-    $value = $arr[1];
-    return 8;
-  }
-
-  public function readString(&$value) {
-    $result = $this->readVarint($len);
-    if ($len) {
-      $value = $this->trans_->readAll($len);
-    } else {
-      $value = '';
-    }
-    return $result + $len;
-  }
-
-  public function getTType($byte) {
-    return self::$ttypes[$byte & 0x0f];
-  }
-
-  // If we are on a 32bit architecture we have to explicitly deal with
-  // 64-bit twos-complement arithmetic since PHP wants to treat all ints
-  // as signed and any int over 2^31 - 1 as a float
-
-  // Read and write I64 as two 32 bit numbers $hi and $lo
-
-  public function readI64(&$value) {
-    // Read varint from wire
-    $hi = 0;
-    $lo = 0;
-
-    $idx = 0;
-    $shift = 0;
-
-    while (true) {
-      $x = $this->trans_->readAll(1);
-      $arr = unpack('C', $x);
-      $byte = $arr[1];
-      $idx += 1;
-      if ($shift < 32) {
-        $lo |= (($byte & 0x7f) << $shift) &
-          0x00000000ffffffff;
-      }
-      // Shift hi and lo together.
-      if ($shift >= 32) {
-        $hi |= (($byte & 0x7f) << ($shift - 32));
-      } else if ($shift > 25) {
-        $hi |= (($byte & 0x7f) >> ($shift - 25));
-      }
-      if (($byte >> 7) === 0) {
-        break;
-      }
-      $shift += 7;
-    }
-
-    // Now, unzig it.
-    $xorer = 0;
-    if ($lo & 1) {
-      $xorer = 0xffffffff;
-    }
-    $lo = ($lo >> 1) & 0x7fffffff;
-    $lo = $lo | (($hi & 1) << 31);
-    $hi = ($hi >> 1) ^ $xorer;
-    $lo = $lo ^ $xorer;
-
-    // Now put $hi and $lo back together
-    if (true) {
-      $isNeg = $hi  < 0;
-
-      // Check for a negative
-      if ($isNeg) {
-        $hi = ~$hi & (int)0xffffffff;
-        $lo = ~$lo & (int)0xffffffff;
-
-        if ($lo == (int)0xffffffff) {
-          $hi++;
-          $lo = 0;
-        } else {
-          $lo++;
-        }
-      }
-
-      // Force 32bit words in excess of 2G to be positive - we deal with sign
-      // explicitly below
-
-      if ($hi & (int)0x80000000) {
-        $hi &= (int)0x7fffffff;
-        $hi += 0x80000000;
-      }
-
-      if ($lo & (int)0x80000000) {
-        $lo &= (int)0x7fffffff;
-        $lo += 0x80000000;
-      }
-
-      $value = $hi * 4294967296 + $lo;
-
-      if ($isNeg) {
-        $value = 0 - $value;
-      }
-    } else {
-
-      // Upcast negatives in LSB bit
-      if ($arr[2] & 0x80000000) {
-        $arr[2] = $arr[2] & 0xffffffff;
-      }
-
-      // Check for a negative
-      if ($arr[1] & 0x80000000) {
-        $arr[1] = $arr[1] & 0xffffffff;
-        $arr[1] = $arr[1] ^ 0xffffffff;
-        $arr[2] = $arr[2] ^ 0xffffffff;
-        $value = 0 - $arr[1] * 4294967296 - $arr[2] - 1;
-      } else {
-        $value = $arr[1] * 4294967296 + $arr[2];
-      }
-    }
-
-    return $idx;
-  }
-
-  public function writeI64($value) {
-    // If we are in an I32 range, use the easy method below.
-    if (($value > 4294967296) || ($value < -4294967296)) {
-      // Convert $value to $hi and $lo
-      $neg = $value < 0;
-
-      if ($neg) {
-        $value *= -1;
-      }
-
-      $hi = (int)$value >> 32;
-      $lo = (int)$value & 0xffffffff;
-
-      if ($neg) {
-        $hi = ~$hi;
-        $lo = ~$lo;
-        if (($lo & (int)0xffffffff) == (int)0xffffffff) {
-          $lo = 0;
-          $hi++;
-        } else {
-          $lo++;
-        }
-      }
-
-      // Now do the zigging and zagging.
-      $xorer = 0;
-      if ($neg) {
-        $xorer = 0xffffffff;
-      }
-      $lowbit = ($lo >> 31) & 1;
-      $hi = ($hi << 1) | $lowbit;
-      $lo = ($lo << 1);
-      $lo = ($lo ^ $xorer) & 0xffffffff;
-      $hi = ($hi ^ $xorer) & 0xffffffff;
-
-      // now write out the varint, ensuring we shift both hi and lo
-      $out = "";
-      while (true) {
-        if (($lo & ~0x7f) === 0 &&
-           $hi === 0) {
-          $out .= chr($lo);
-          break;
-        } else {
-          $out .= chr(($lo & 0xff) | 0x80);
-          $lo = $lo >> 7;
-          $lo = $lo | ($hi << 25);
-          $hi = $hi >> 7;
-          // Right shift carries sign, but we don't want it to.
-          $hi = $hi & (127 << 25);
-        }
-      }
-
-      $ret = TStringFuncFactory::create()->strlen($out);
-      $this->trans_->write($out, $ret);
-
-      return $ret;
-    } else {
-      return $this->writeVarint($this->toZigZag($value, 64));
-    }
-  }
-}

http://git-wip-us.apache.org/repos/asf/airavata/blob/b61cfcd3/airavata-api/airavata-client-sdks/airavata-php-sdk/src/main/resources/lib/Thrift/Protocol/TJSONProtocol.php
----------------------------------------------------------------------
diff --git a/airavata-api/airavata-client-sdks/airavata-php-sdk/src/main/resources/lib/Thrift/Protocol/TJSONProtocol.php b/airavata-api/airavata-client-sdks/airavata-php-sdk/src/main/resources/lib/Thrift/Protocol/TJSONProtocol.php
deleted file mode 100644
index 3d39583..0000000
--- a/airavata-api/airavata-client-sdks/airavata-php-sdk/src/main/resources/lib/Thrift/Protocol/TJSONProtocol.php
+++ /dev/null
@@ -1,694 +0,0 @@
-<?php
-
-/*
- * Licensed to the Apache Software Foundation (ASF) under one
- * or more contributor license agreements. See the NOTICE file
- * distributed with this work for additional information
- * regarding copyright ownership. The ASF licenses this file
- * to you under the Apache License, Version 2.0 (the
- * "License"); you may not use this file except in compliance
- * with the License. You may obtain a copy of the License at
- *
- *   http://www.apache.org/licenses/LICENSE-2.0
- *
- * Unless required by applicable law or agreed to in writing,
- * software distributed under the License is distributed on an
- * "AS IS" BASIS, WITHOUT WARRANTIES OR CONDITIONS OF ANY
- * KIND, either express or implied. See the License for the
- * specific language governing permissions and limitations
- * under the License.
- *
- * @package thrift.protocol
- */
-
-namespace Thrift\Protocol;
-
-use Thrift\Protocol\TProtocol;
-use Thrift\Type\TType;
-use Thrift\Exception\TProtocolException;
-use Thrift\Protocol\JSON\BaseContext;
-use Thrift\Protocol\JSON\LookaheadReader;
-use Thrift\Protocol\JSON\PairContext;
-use Thrift\Protocol\JSON\ListContext;
-
-/**
- * JSON implementation of thrift protocol, ported from Java.
- */
-class TJSONProtocol extends TProtocol
-{
-    const COMMA = ',';
-    const COLON = ':';
-    const LBRACE = '{';
-    const RBRACE = '}';
-    const LBRACKET = '[';
-    const RBRACKET = ']';
-    const QUOTE = '"';
-    const BACKSLASH = '\\';
-    const ZERO = '0';
-    const ESCSEQ = '\\';
-    const DOUBLEESC = '__DOUBLE_ESCAPE_SEQUENCE__';
-
-    const VERSION = 1;
-
-    public static $JSON_CHAR_TABLE = array(
-        /*  0   1   2   3   4   5   6   7   8   9   A   B   C   D   E   F */
-        0, 0, 0, 0, 0, 0, 0, 0, 'b', 't', 'n', 0, 'f', 'r', 0, 0, // 0
-        0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, // 1
-        1, 1, '"', 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, // 2
-    );
-
-    public static $ESCAPE_CHARS = array('"', '\\', "b", "f", "n", "r", "t");
-
-    public static $ESCAPE_CHAR_VALS = array(
-        '"', '\\', "\x08", "\f", "\n", "\r", "\t",
-    );
-
-    const NAME_BOOL = "tf";
-    const NAME_BYTE = "i8";
-    const NAME_I16 = "i16";
-    const NAME_I32 = "i32";
-    const NAME_I64 = "i64";
-    const NAME_DOUBLE = "dbl";
-    const NAME_STRUCT = "rec";
-    const NAME_STRING = "str";
-    const NAME_MAP = "map";
-    const NAME_LIST = "lst";
-    const NAME_SET = "set";
-
-    private function getTypeNameForTypeID($typeID)
-    {
-        switch ($typeID) {
-            case TType::BOOL:
-                return self::NAME_BOOL;
-            case TType::BYTE:
-                return self::NAME_BYTE;
-            case TType::I16:
-                return self::NAME_I16;
-            case TType::I32:
-                return self::NAME_I32;
-            case TType::I64:
-                return self::NAME_I64;
-            case TType::DOUBLE:
-                return self::NAME_DOUBLE;
-            case TType::STRING:
-                return self::NAME_STRING;
-            case TType::STRUCT:
-                return self::NAME_STRUCT;
-            case TType::MAP:
-                return self::NAME_MAP;
-            case TType::SET:
-                return self::NAME_SET;
-            case TType::LST:
-                return self::NAME_LIST;
-            default:
-                throw new TProtocolException("Unrecognized type", TProtocolException::UNKNOWN);
-        }
-    }
-
-    private function getTypeIDForTypeName($name)
-    {
-        $result = TType::STOP;
-
-        if (strlen($name) > 1) {
-            switch (substr($name, 0, 1)) {
-                case 'd':
-                    $result = TType::DOUBLE;
-                    break;
-                case 'i':
-                    switch (substr($name, 1, 1)) {
-                        case '8':
-                            $result = TType::BYTE;
-                            break;
-                        case '1':
-                            $result = TType::I16;
-                            break;
-                        case '3':
-                            $result = TType::I32;
-                            break;
-                        case '6':
-                            $result = TType::I64;
-                            break;
-                    }
-                    break;
-                case 'l':
-                    $result = TType::LST;
-                    break;
-                case 'm':
-                    $result = TType::MAP;
-                    break;
-                case 'r':
-                    $result = TType::STRUCT;
-                    break;
-                case 's':
-                    if (substr($name, 1, 1) == 't') {
-                        $result = TType::STRING;
-                    }
-                    else if (substr($name, 1, 1) == 'e') {
-                        $result = TType::SET;
-                    }
-                    break;
-                case 't':
-                    $result = TType::BOOL;
-                    break;
-            }
-        }
-        if ($result == TType::STOP) {
-            throw new TProtocolException("Unrecognized type", TProtocolException::INVALID_DATA);
-        }
-        return $result;
-    }
-
-    public $contextStack_ = array();
-    public $context_;
-    public $reader_;
-
-    private function pushContext($c) {
-        array_push($this->contextStack_, $this->context_);
-        $this->context_ = $c;
-    }
-
-    private function popContext() {
-        $this->context_ = array_pop($this->contextStack_);
-    }
-
-    public function __construct($trans) {
-        parent::__construct($trans);
-        $this->context_ = new BaseContext();
-        $this->reader_ = new LookaheadReader($this);
-    }
-
-    public function reset() {
-        $this->contextStack_ = array();
-        $this->context_ = new BaseContext();
-        $this->reader_ = new LookaheadReader($this);
-    }
-
-    private $tmpbuf_ = array(4);
-
-    public function readJSONSyntaxChar($b) {
-        $ch = $this->reader_->read();
-
-        if (substr($ch, 0, 1) != $b) {
-            throw new TProtocolException("Unexpected character: " . $ch, TProtocolException::INVALID_DATA);
-        }
-    }
-
-    private function hexVal($s) {
-        for ($i = 0; $i < strlen($s); $i++) {
-            $ch = substr($s, $i, 1);
-
-            if (!($ch >= "a" && $ch <= "f") && !($ch >= "0" && $ch <= "9")) {
-                throw new TProtocolException("Expected hex character " . $ch, TProtocolException::INVALID_DATA);
-            }
-        }
-
-        return hexdec($s);
-    }
-
-    private function hexChar($val) {
-        return dechex($val);
-    }
-
-    private function writeJSONString($b) {
-        $this->context_->write();
-
-        if (is_numeric($b) && $this->context_->escapeNum()) {
-            $this->trans_->write(self::QUOTE);
-        }
-
-        $this->trans_->write(json_encode($b));
-
-        if (is_numeric($b) && $this->context_->escapeNum()) {
-            $this->trans_->write(self::QUOTE);
-        }
-    }
-
-    private function writeJSONInteger($num) {
-        $this->context_->write();
-
-        if ($this->context_->escapeNum()) {
-            $this->trans_->write(self::QUOTE);
-        }
-
-        $this->trans_->write($num);
-
-        if ($this->context_->escapeNum()) {
-            $this->trans_->write(self::QUOTE);
-        }
-    }
-
-    private function writeJSONDouble($num) {
-        $this->context_->write();
-
-        if ($this->context_->escapeNum()) {
-            $this->trans_->write(self::QUOTE);
-        }
-
-        $this->trans_->write(json_encode($num));
-
-        if ($this->context_->escapeNum()) {
-            $this->trans_->write(self::QUOTE);
-        }
-    }
-
-    private function writeJSONBase64($data) {
-        $this->context_->write();
-        $this->trans_->write(self::QUOTE);
-        $this->trans_->write(json_encode(base64_encode($data)));
-        $this->trans_->write(self::QUOTE);
-    }
-
-    private function writeJSONObjectStart() {
-      $this->context_->write();
-      $this->trans_->write(self::LBRACE);
-      $this->pushContext(new PairContext($this));
-    }
-
-    private function writeJSONObjectEnd() {
-      $this->popContext();
-      $this->trans_->write(self::RBRACE);
-    }
-
-    private function writeJSONArrayStart() {
-      $this->context_->write();
-      $this->trans_->write(self::LBRACKET);
-      $this->pushContext(new ListContext($this));
-    }
-
-    private function writeJSONArrayEnd() {
-      $this->popContext();
-      $this->trans_->write(self::RBRACKET);
-    }
-
-    private function readJSONString($skipContext) {
-      if (!$skipContext) {
-        $this->context_->read();
-      }
-
-      $jsonString = '';
-      $lastChar = NULL;
-      while (true) {
-        $ch = $this->reader_->read();
-        $jsonString .= $ch;
-        if ($ch == self::QUOTE &&
-          $lastChar !== NULL &&
-            $lastChar !== self::ESCSEQ) {
-          break;
-        }
-        if ($ch == self::ESCSEQ && $lastChar == self::ESCSEQ) {
-          $lastChar = self::DOUBLEESC;
-        } else {
-          $lastChar = $ch;
-        }
-      }
-      return json_decode($jsonString);
-    }
-
-    private function isJSONNumeric($b) {
-        switch ($b) {
-            case '+':
-            case '-':
-            case '.':
-            case '0':
-            case '1':
-            case '2':
-            case '3':
-            case '4':
-            case '5':
-            case '6':
-            case '7':
-            case '8':
-            case '9':
-            case 'E':
-            case 'e':
-              return true;
-            }
-        return false;
-    }
-
-    private function readJSONNumericChars() {
-        $strbld = array();
-
-        while (true) {
-            $ch = $this->reader_->peek();
-
-            if (!$this->isJSONNumeric($ch)) {
-                break;
-            }
-
-            $strbld[] = $this->reader_->read();
-        }
-
-        return implode("", $strbld);
-    }
-
-    private function readJSONInteger() {
-        $this->context_->read();
-
-        if ($this->context_->escapeNum()) {
-            $this->readJSONSyntaxChar(self::QUOTE);
-        }
-
-        $str = $this->readJSONNumericChars();
-
-        if ($this->context_->escapeNum()) {
-            $this->readJSONSyntaxChar(self::QUOTE);
-        }
-
-        if (!is_numeric($str)) {
-            throw new TProtocolException("Invalid data in numeric: " . $str, TProtocolException::INVALID_DATA);
-        }
-
-        return intval($str);
-    }
-
-    /**
-     * Identical to readJSONInteger but without the final cast.
-     * Needed for proper handling of i64 on 32 bit machines.  Why a
-     * separate function?  So we don't have to force the rest of the
-     * use cases through the extra conditional.
-     */
-    private function readJSONIntegerAsString() {
-        $this->context_->read();
-
-        if ($this->context_->escapeNum()) {
-            $this->readJSONSyntaxChar(self::QUOTE);
-        }
-
-        $str = $this->readJSONNumericChars();
-
-        if ($this->context_->escapeNum()) {
-            $this->readJSONSyntaxChar(self::QUOTE);
-        }
-
-        if (!is_numeric($str)) {
-            throw new TProtocolException("Invalid data in numeric: " . $str, TProtocolException::INVALID_DATA);
-        }
-
-        return $str;
-    }
-
-    private function readJSONDouble() {
-        $this->context_->read();
-
-        if (substr($this->reader_->peek(), 0, 1) == self::QUOTE) {
-            $arr = $this->readJSONString(true);
-
-            if ($arr == "NaN") {
-                return NAN;
-            } else if ($arr == "Infinity") {
-                return INF;
-            } else if (!$this->context_->escapeNum()) {
-                throw new TProtocolException("Numeric data unexpectedly quoted " . $arr,
-                                              TProtocolException::INVALID_DATA);
-            }
-
-            return floatval($arr);
-        } else {
-            if ($this->context_->escapeNum()) {
-                $this->readJSONSyntaxChar(self::QUOTE);
-            }
-
-            return floatval($this->readJSONNumericChars());
-        }
-    }
-
-    private function readJSONBase64() {
-        $arr = $this->readJSONString(false);
-        $data = base64_decode($arr, true);
-
-        if ($data === false) {
-            throw new TProtocolException("Invalid base64 data " . $arr, TProtocolException::INVALID_DATA);
-        }
-
-        return $data;
-    }
-
-    private function readJSONObjectStart() {
-        $this->context_->read();
-        $this->readJSONSyntaxChar(self::LBRACE);
-        $this->pushContext(new PairContext($this));
-    }
-
-    private function readJSONObjectEnd() {
-        $this->readJSONSyntaxChar(self::RBRACE);
-        $this->popContext();
-    }
-
-    private function readJSONArrayStart()
-    {
-        $this->context_->read();
-        $this->readJSONSyntaxChar(self::LBRACKET);
-        $this->pushContext(new ListContext($this));
-    }
-
-    private function readJSONArrayEnd() {
-        $this->readJSONSyntaxChar(self::RBRACKET);
-        $this->popContext();
-    }
-
-    /**
-     * Writes the message header
-     *
-     * @param string $name Function name
-     * @param int $type message type TMessageType::CALL or TMessageType::REPLY
-     * @param int $seqid The sequence id of this message
-     */
-    public function writeMessageBegin($name, $type, $seqid) {
-        $this->writeJSONArrayStart();
-        $this->writeJSONInteger(self::VERSION);
-        $this->writeJSONString($name);
-        $this->writeJSONInteger($type);
-        $this->writeJSONInteger($seqid);
-    }
-
-    /**
-     * Close the message
-     */
-    public function writeMessageEnd() {
-        $this->writeJSONArrayEnd();
-    }
-
-    /**
-     * Writes a struct header.
-     *
-     * @param string     $name Struct name
-     * @throws TException on write error
-     * @return int How many bytes written
-     */
-    public function writeStructBegin($name) {
-        $this->writeJSONObjectStart();
-    }
-
-    /**
-     * Close a struct.
-     *
-     * @throws TException on write error
-     * @return int How many bytes written
-     */
-    public function writeStructEnd() {
-        $this->writeJSONObjectEnd();
-    }
-
-    public function writeFieldBegin($fieldName, $fieldType, $fieldId) {
-        $this->writeJSONInteger($fieldId);
-        $this->writeJSONObjectStart();
-        $this->writeJSONString($this->getTypeNameForTypeID($fieldType));
-    }
-
-    public function writeFieldEnd() {
-        $this->writeJsonObjectEnd();
-    }
-
-    public function writeFieldStop() {
-    }
-
-    public function writeMapBegin($keyType, $valType, $size) {
-        $this->writeJSONArrayStart();
-        $this->writeJSONString($this->getTypeNameForTypeID($keyType));
-        $this->writeJSONString($this->getTypeNameForTypeID($valType));
-        $this->writeJSONInteger($size);
-        $this->writeJSONObjectStart();
-    }
-
-    public function writeMapEnd() {
-        $this->writeJSONObjectEnd();
-        $this->writeJSONArrayEnd();
-    }
-
-    public function writeListBegin($elemType, $size) {
-        $this->writeJSONArrayStart();
-        $this->writeJSONString($this->getTypeNameForTypeID($elemType));
-        $this->writeJSONInteger($size);
-    }
-
-    public function writeListEnd() {
-        $this->writeJSONArrayEnd();
-    }
-
-    public function writeSetBegin($elemType, $size) {
-        $this->writeJSONArrayStart();
-        $this->writeJSONString($this->getTypeNameForTypeID($elemType));
-        $this->writeJSONInteger($size);
-    }
-
-    public function writeSetEnd() {
-        $this->writeJSONArrayEnd();
-    }
-
-    public function writeBool($bool) {
-        $this->writeJSONInteger($bool ? 1 : 0);
-    }
-
-    public function writeByte($byte) {
-        $this->writeJSONInteger($byte);
-    }
-
-    public function writeI16($i16) {
-        $this->writeJSONInteger($i16);
-    }
-
-    public function writeI32($i32) {
-        $this->writeJSONInteger($i32);
-    }
-
-    public function writeI64($i64) {
-        $this->writeJSONInteger($i64);
-    }
-
-    public function writeDouble($dub) {
-        $this->writeJSONDouble($dub);
-    }
-
-    public function writeString($str) {
-        $this->writeJSONString($str);
-    }
-
-    /**
-     * Reads the message header
-     *
-     * @param string $name Function name
-     * @param int $type message type TMessageType::CALL or TMessageType::REPLY
-     * @parem int $seqid The sequence id of this message
-     */
-    public function readMessageBegin(&$name, &$type, &$seqid) {
-        $this->readJSONArrayStart();
-
-        if ($this->readJSONInteger() != self::VERSION) {
-            throw new TProtocolException("Message contained bad version", TProtocolException::BAD_VERSION);
-        }
-
-        $name = $this->readJSONString(false);
-        $type = $this->readJSONInteger();
-        $seqid = $this->readJSONInteger();
-
-        return true;
-    }
-
-    /**
-     * Read the close of message
-     */
-    public function readMessageEnd() {
-        $this->readJSONArrayEnd();
-    }
-
-    public function readStructBegin(&$name) {
-        $this->readJSONObjectStart();
-        return 0;
-    }
-
-    public function readStructEnd() {
-        $this->readJSONObjectEnd();
-    }
-
-    public function readFieldBegin(&$name, &$fieldType, &$fieldId) {
-        $ch = $this->reader_->peek();
-        $name = "";
-
-        if (substr($ch, 0, 1) == self::RBRACE) {
-            $fieldType = TType::STOP;
-        } else {
-            $fieldId = $this->readJSONInteger();
-            $this->readJSONObjectStart();
-            $fieldType = $this->getTypeIDForTypeName($this->readJSONString(false));
-        }
-    }
-
-    public function readFieldEnd() {
-        $this->readJSONObjectEnd();
-    }
-
-    public function readMapBegin(&$keyType, &$valType, &$size) {
-        $this->readJSONArrayStart();
-        $keyType = $this->getTypeIDForTypeName($this->readJSONString(false));
-        $valType = $this->getTypeIDForTypeName($this->readJSONString(false));
-        $size = $this->readJSONInteger();
-        $this->readJSONObjectStart();
-    }
-
-    public function readMapEnd() {
-        $this->readJSONObjectEnd();
-        $this->readJSONArrayEnd();
-    }
-
-    public function readListBegin(&$elemType, &$size) {
-        $this->readJSONArrayStart();
-        $elemType = $this->getTypeIDForTypeName($this->readJSONString(false));
-        $size = $this->readJSONInteger();
-        return true;
-    }
-
-    public function readListEnd() {
-        $this->readJSONArrayEnd();
-    }
-
-    public function readSetBegin(&$elemType, &$size) {
-        $this->readJSONArrayStart();
-        $elemType = $this->getTypeIDForTypeName($this->readJSONString(false));
-        $size = $this->readJSONInteger();
-        return true;
-    }
-
-    public function readSetEnd() {
-        $this->readJSONArrayEnd();
-    }
-
-    public function readBool(&$bool) {
-        $bool = $this->readJSONInteger() == 0 ? false : true;
-        return true;
-    }
-
-    public function readByte(&$byte) {
-        $byte = $this->readJSONInteger();
-        return true;
-    }
-
-    public function readI16(&$i16) {
-        $i16 = $this->readJSONInteger();
-        return true;
-    }
-
-    public function readI32(&$i32) {
-        $i32 = $this->readJSONInteger();
-        return true;
-    }
-
-    public function readI64(&$i64) {
-        if ( PHP_INT_SIZE === 4 ) {
-            $i64 = $this->readJSONIntegerAsString();
-        } else {
-            $i64 = $this->readJSONInteger();
-        }
-        return true;
-    }
-
-    public function readDouble(&$dub) {
-        $dub = $this->readJSONDouble();
-        return true;
-    }
-
-    public function readString(&$str) {
-        $str = $this->readJSONString(false);
-        return true;
-    }
-}


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