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From samin...@apache.org
Subject [48/90] [abbrv] [partial] AIRAVATA-1124
Date Mon, 14 Apr 2014 18:30:50 GMT
http://git-wip-us.apache.org/repos/asf/airavata/blob/0e2c10f5/modules/distribution/xbaya-gui/src/main/resources/NOTICE
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diff --git a/modules/distribution/xbaya-gui/src/main/resources/NOTICE b/modules/distribution/xbaya-gui/src/main/resources/NOTICE
deleted file mode 100644
index 431db59..0000000
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+++ /dev/null
@@ -1,163 +0,0 @@
-Apache Airavata
-Copyright 2014 The Apache Software Foundation
-
-This product includes software developed at
-The Apache Software Foundation (http://www.apache.org/).
-
-===============================================================================
-Apache Xerces Java Notice:
-
-   Portions of this software were originally based on the following:
-     - software copyright (c) 1999, IBM Corporation., http://www.ibm.com.
-     - software copyright (c) 1999, Sun Microsystems., http://www.sun.com.
-     - voluntary contributions made by Paul Eng on behalf of the
-       Apache Software Foundation that were originally developed at iClick, Inc.,
-       software copyright (c) 1999.
-
-================================================================================
-Apache XmlBeans Notice: 
-
-   Portions of this software were originally based on the following:
-     - software copyright (c) 2000-2003, BEA Systems, <http://www.bea.com/>.
-
-   Aside from contributions to the Apache XMLBeans project, this
-   software also includes:
-
-    - one or more source files from the Apache Xerces-J and Apache Axis
-      products, Copyright (c) 1999-2003 Apache Software Foundation
-
-    - W3C XML Schema documents Copyright 2001-2003 (c) World Wide Web
-      Consortium (Massachusetts Institute of Technology, European Research
-      Consortium for Informatics and Mathematics, Keio University)
-
-    - resolver.jar from Apache Xml Commons project,
-      Copyright (c) 2001-2003 Apache Software Foundation
-
-    - Piccolo XML Parser for Java from http://piccolo.sourceforge.net/,
-      Copyright 2002 Yuval Oren under the terms of the Apache Software License 2.0
-
-    - JSR-173 Streaming API for XML from http://sourceforge.net/projects/xmlpullparser/,
-      Copyright 2005 BEA under the terms of the Apache Software License 2.0
-      
-=========================================================================================
-Apache Axis2 Notice: (axis2-*, mex-1.5.1-impl)
-
-Portions Copyright 2006 International Business Machines Corp.
-Portions Copyright 2005-2007 WSO2, Inc.
-
-This product also includes schemas and specification developed by:
-- the W3C consortium (http://www.w3c.org)
-
-This product also includes WS-* schemas developed by International
-Business Machines Corporation, Microsoft Corporation, BEA Systems, 
-TIBCO Software, SAP AG, Sonic Software, and VeriSign
-
-This product also includes a WSDL developed by salesforce.com
-- Copyright 1999-2006 salesforce.com, inc.
-Portions of the included xmlbeans library were originally based on the following:
-- software copyright (c) 2000-2003, BEA Systems, <http://www.bea.com/>.
-
-====================================================================================
-Apache Derby Notice:
-
-Portions of Derby were originally developed by
-International Business Machines Corporation and are
-licensed to the Apache Software Foundation under the
-"Software Grant and Corporate Contribution License Agreement",
-informally known as the "Derby CLA".
-The following copyright notice(s) were affixed to portions of the code
-with which this file is now or was at one time distributed
-and are placed here unaltered.
-
-(C) Copyright 1997,2004 International Business Machines Corporation.  All rights reserved.
-
-(C) Copyright IBM Corp. 2003. 
-
-=======================
-
-The portion of the functionTests under 'nist' was originally 
-developed by the National Institute of Standards and Technology (NIST), 
-an agency of the United States Department of Commerce, and adapted by
-International Business Machines Corporation in accordance with the NIST
-Software Acknowledgment and Redistribution document at
-http://www.itl.nist.gov/div897/ctg/sql_form.htm
-
-========================
-
-The JDBC apis for small devices and JDBC3 (under java/stubs/jsr169 and
-java/stubs/jdbc3) were produced by trimming sources supplied by the
-Apache Harmony project. In addition, the Harmony SerialBlob and
-SerialClob implementations are used. The following notice covers the Harmony sources:
-
-Portions of Harmony were originally developed by
-Intel Corporation and are licensed to the Apache Software
-Foundation under the "Software Grant and Corporate Contribution
-License Agreement", informally known as the "Intel Harmony CLA".
-
-=============================================================================
-Apache Woden Notice:
-
-   This product also includes software developed by :
-   
-     - IBM Corporation (http://www.ibm.com),
-         WSDL4J was the initial code contribution for the Apache Woden
-         project and some of the WSDL4J design and code has been reused.
-     - The W3C Consortium (http://www.w3c.org),
-         Common W3C XML Schema and DTD files are packaged with Apache Woden.
-
-   Please read the different LICENSE files present in the root directory of
-   this distribution.
-
-=========================================================================
-Woodstox Notice: 
-
-This product includes software developed by the Woodstox Project 
-(http://woodstox.codehaus.org/)
-
-This product currently only contains code developed by authors
-of specific components, as identified by the source code files.
-
-Since product implements StAX API, it has dependencies to StAX API
-classes.
-
-For additional credits (generally to people who reported problems)
-see CREDITS file.
-
-===========================================================================
-Apache xml-commons xml-apis Notice:
-
-   Portions of this software were originally based on the following:
-     - software copyright (c) 1999, IBM Corporation., http://www.ibm.com.
-     - software copyright (c) 1999, Sun Microsystems., http://www.sun.com.
-     - software copyright (c) 2000 World Wide Web Consortium, http://www.w3.org
-
-================================================================================================
-Apache  Xalan Notice: 
-
-Portions of this software was originally based on the following:
-     - software copyright (c) 1999-2002, Lotus Development Corporation., http://www.lotus.com.
-     - software copyright (c) 2001-2002, Sun Microsystems., http://www.sun.com.
-     - software copyright (c) 2003, IBM Corporation., http://www.ibm.com.
-     - voluntary contributions made by Ovidiu Predescu (ovidiu@cup.hp.com) on behalf of the

-       Apache Software Foundation and was originally developed at Hewlett Packard Company.

-================================================================================================
-Apache  OpenJPA Notice: 
-
-OpenJPA includes software developed by the SERP project
-Copyright (c) 2002-2006, A. Abram White. All rights reserved.
-
-OpenJPA includes the persistence and orm schemas from the JPA specifications.
-Copyright 2005-2009 Sun Microsystems, Inc. All rights reserved.
-OpenJPA elects to include this software in this distribution under the
-CDDL license.  You can obtain a copy of the License at:
-    https://glassfish.dev.java.net/public/CDDL+GPL.html
-The source code is available at:
-    https://glassfish.dev.java.net/source/browse/glassfish/
-
-OpenJPA includes software written by Miroslav Nachev
-OpenJPA uses test code written by Charles Tillman.
-================================================================================================
-Apache XmlSchema Notice:
-
-Portions Copyright 2006 International Business Machines Corp.
-================================================================================================
\ No newline at end of file

http://git-wip-us.apache.org/repos/asf/airavata/blob/0e2c10f5/modules/distribution/xbaya-gui/src/main/resources/README
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diff --git a/modules/distribution/xbaya-gui/src/main/resources/README b/modules/distribution/xbaya-gui/src/main/resources/README
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index 6ca8faf..0000000
--- a/modules/distribution/xbaya-gui/src/main/resources/README
+++ /dev/null
@@ -1,101 +0,0 @@
-Apache Airavata XBaya - README.txt
-Licensed under Apache License 2.0 - http://www.apache.org/licenses/LICENSE-2.0
---------------------------------------------------------------------------------
-
-About
-=====
-Apache Airavata, a software framework to executing and managing computational jobs on 
-distributed computing resources including local clusters, supercomputers, national grids,

-academic and commercial clouds. Airavata can be used as individual components or 
-as an integrated solution to build science gateways or general-purpose distributed 
-application and workflow management systems. Users can use Airavata back end services 
-and build gadgets to deploy in open social containers such as Apache Rave and modify them

-to suit their needs. Airavata builds on general concepts of service oriented computing, 
-distributed messaging, and workflow composition and orchestration.
-
-This distribution is a client gui application capable of composing workflows, application

-descriptors & communicating with the airavata server to persist user data, run &
monitor 
-experiments and analyze the results.
-
-Release Notes
-=============
-0.11 is the tenth release of Airavata (skipped 0.1-INCUBATNG). This release focuses GFac
rearchitecturing and more GFac level changes. For detailed tasks list, please see RELEASE_NOTES.
-
-Building from source
-====================
-For brief installation instructions, see INSTALL
-For detailed installation and further instructions refer http://airavata.apache.org/ - Documentation
section in left hand panel. Step by step with proper documentation are provided.
-
-Known Issues in This Release
-============================
-This is the base release and is focused on a good foundation and less on features. This 
-version is not recommended for production usage.
-
-Airavata XBaya Distribution Directory Structure
-================================================
-
-    AIRAVATA_XBAYA
-		├── bin
-		│   ├── airavata-client.properties
-		│   ├── log4j.properties
-		│   ├── setenv.bat
-		│   ├── setenv.sh
-		│   ├── xbaya-gui.bat
-		│   └── xbaya-gui.sh
-		├── lib
-		├── samples
-		├── INSTALL
-		├── LICENSE
-		├── NOTICE
-		└── README
-
-How to test and run samples
-===========================
-* If you built Airavata from source, and if you see "BUILD SUCCESS", then the test cases
should have passes.
-* The test cases are beyond unit level, they startup embedded services and run through basic
workflow use cases.
-* To walk through Airavata features, follow "Airavata in Five Minutes" tutorial at http://airavata.apache.org/documentation/tutorials/airavata-in-5-minutes.html
-* For intermediate level Airavata features, follow "Airavata in Ten Minutes" tutorial at
http://airavata.apache.org/documentation/tutorials/airavata-in-10-minutes.html 
-* For advanced use cases, please contact mailing lists - http://airavata.apache.org/community/mailing-lists.html
-
-Description of Directory Structure
-==================================
-
-    - bin
-      This contains the configuration files for Airavata XBaya & the scripts to run XBaya
GUI Application.
-
-    - samples
-      This contains sample scripts to define the sample descriptor in http://airavata.apache.org/documentation/tutorials/airavata-in-10-minutes.html
-
-    - lib
-      This contains all the libraries required to run the client side code with the jars
required to run XBaya GUI.
-
-    - README
-      This document.
-
-    - INSTALL
-          This document will contain information on installing Apache-Airavata XBaya.
-
-Other Available Distributions
-=============================
-
-Server Distributions
---------------------
-* Airavata Server
-  The Airavata Server binary distribution allows you to run a standalone Airavata Server
which includes all the airavata services 
-  shipped with a default derby database as the backend registry. For stable purposes, a mysql
configuration is recommended. 
-
-* Airavata Server Web Application
-  This is similar package as the Airavata Server but is distributed as the server Web Application
archive.
-  This war is compatible with Apache Tomcat application server. The war bundles all airavata
services 
-  enabled by defualt to startup a derby database as the backend registry. For stable purposes,
a mysql configuration is recommended. 
-
-Client Distributions
---------------------
-* Airavata XBaya
-  The Airavata XBaya distribution is a client GUI application with features to register applications
as web services, construct workflows,
-  execute and monitor workflows and browse the generated results from the airavata registry.
-
-* Airavata XBaya JNLP
-  The Airavata XBaya JNLP distribution is the simular GUI distribution but prepackeged to
be ready to be deployed to 
-   a web server as a web start application. The GUI provides features to register applications
as web services, construct workflows,
-  execute and monitor workflows and browse the generated results from the airavata registry.


http://git-wip-us.apache.org/repos/asf/airavata/blob/0e2c10f5/modules/distribution/xbaya-gui/src/main/resources/airavata-logo.gif
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http://git-wip-us.apache.org/repos/asf/airavata/blob/0e2c10f5/modules/distribution/xbaya-gui/src/main/resources/bin/setenv.bat
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diff --git a/modules/distribution/xbaya-gui/src/main/resources/bin/setenv.bat b/modules/distribution/xbaya-gui/src/main/resources/bin/setenv.bat
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index e02e0d6..0000000
--- a/modules/distribution/xbaya-gui/src/main/resources/bin/setenv.bat
+++ /dev/null
@@ -1,42 +0,0 @@
-rem Licensed to the Apache Software Foundation (ASF) under one
-rem or more contributor license agreements. See the NOTICE file
-rem distributed with this work for additional information
-rem regarding copyright ownership. The ASF licenses this file
-rem to you under the Apache License, Version 2.0 (the
-rem "License"); you may not use this file except in compliance
-rem with the License. You may obtain a copy of the License at
-rem
-rem http://www.apache.org/licenses/LICENSE-2.0
-rem
-rem Unless required by applicable law or agreed to in writing,
-rem software distributed under the License is distributed on an
-rem "AS IS" BASIS, WITHOUT WARRANTIES OR CONDITIONS OF ANY
-rem KIND, either express or implied. See the License for the
-rem specific language governing permissions and limitations
-rem under the License.
-
-@echo off
-
-:checkJava
-if "%JAVA_HOME%" == "" goto noJavaHome
-if not exist "%JAVA_HOME%\bin\java.exe" goto noJavaHome
-goto initialize
-
-:noJavaHome
-echo You must set the JAVA_HOME environment variable before running Airavata.
-goto end
-
-:initialize
-if "%XBAYA_HOME%"=="" set XBAYA_HOME=%~sdp0..
-SET curDrive=%cd:~0,1%
-SET xBayaDrive=%XBAYA_HOME:~0,1%
-if not "%curDrive%" == "%xBayaDrive%" %xBayaDrive%:
-goto updateClasspath
-
-rem ----- update classpath -----------------------------------------------------
-:updateClasspath
-cd %XBAYA_HOME%
-set XBAYA_CLASSPATH=
-FOR %%C in ("%XBAYA_HOME%\lib\*.jar") DO set XBAYA_CLASSPATH=!XBAYA_CLASSPATH!;..\lib\%%~nC%%~xC
-
-:end
\ No newline at end of file

http://git-wip-us.apache.org/repos/asf/airavata/blob/0e2c10f5/modules/distribution/xbaya-gui/src/main/resources/bin/setenv.sh
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diff --git a/modules/distribution/xbaya-gui/src/main/resources/bin/setenv.sh b/modules/distribution/xbaya-gui/src/main/resources/bin/setenv.sh
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index 84673db..0000000
--- a/modules/distribution/xbaya-gui/src/main/resources/bin/setenv.sh
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@@ -1,77 +0,0 @@
-#!/bin/sh
-
-# Licensed to the Apache Software Foundation (ASF) under one
-# or more contributor license agreements. See the NOTICE file
-# distributed with this work for additional information
-# regarding copyright ownership. The ASF licenses this file
-# to you under the Apache License, Version 2.0 (the
-# "License"); you may not use this file except in compliance
-# with the License. You may obtain a copy of the License at
-# 
-# http://www.apache.org/licenses/LICENSE-2.0
-# 
-# Unless required by applicable law or agreed to in writing,
-# software distributed under the License is distributed on an
-# "AS IS" BASIS, WITHOUT WARRANTIES OR CONDITIONS OF ANY
-# KIND, either express or implied. See the License for the
-# specific language governing permissions and limitations
-# under the License.
-
-
-# Get standard environment variables
-# if JAVA_HOME is not set we're not happy
-if [ -z "$JAVA_HOME" ]; then
-  echo "You must set the JAVA_HOME variable before running Airavata Scripts."
-  exit 1
-fi
-
-# OS specific support.  $var _must_ be set to either true or false.
-cygwin=false
-os400=false
-case "`uname`" in
-CYGWIN*) cygwin=true;;
-OS400*) os400=true;;
-esac
-
-# resolve links - $0 may be a softlink
-PRG="$0"
-
-while [ -h "$PRG" ]; do
-  ls=`ls -ld "$PRG"`
-  link=`expr "$ls" : '.*-> \(.*\)$'`
-  if expr "$link" : '.*/.*' > /dev/null; then
-    PRG="$link"
-  else
-    PRG=`dirname "$PRG"`/"$link"
-  fi
-done
-
-
-PRGDIR=`dirname "$PRG"`
-
-# Only set AIRAVATA_HOME if not already set
-[ -z "$AIRAVATA_HOME" ] && AIRAVATA_HOME=`cd "$PRGDIR/.." ; pwd`
-
-XBAYA_CLASSPATH=""
-
-
-
-for f in "$AIRAVATA_HOME"/lib/*.jar
-do
-  XBAYA_CLASSPATH="$XBAYA_CLASSPATH":$f
-done
-
-for f in "$AIRAVATA_HOME"/repository/services/*.jar
-do
-  XBAYA_CLASSPATH="$XBAYA_CLASSPATH":$f
-done
-
-XBAYA_CLASSPATH="$XBAYA_HOME":"$XBAYA_HOME/conf":"$XBAYA_CLASSPATH":"$CLASSPATH"
-
-
-
-
-export AIRAVATA_HOME
-export XBAYA_CLASSPATH
-
-

http://git-wip-us.apache.org/repos/asf/airavata/blob/0e2c10f5/modules/distribution/xbaya-gui/src/main/resources/bin/xbaya-gui.bat
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diff --git a/modules/distribution/xbaya-gui/src/main/resources/bin/xbaya-gui.bat b/modules/distribution/xbaya-gui/src/main/resources/bin/xbaya-gui.bat
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--- a/modules/distribution/xbaya-gui/src/main/resources/bin/xbaya-gui.bat
+++ /dev/null
@@ -1,23 +0,0 @@
-@echo off
-rem Licensed to the Apache Software Foundation (ASF) under one
-rem or more contributor license agreements. See the NOTICE file
-rem distributed with this work for additional information
-rem regarding copyright ownership. The ASF licenses this file
-rem to you under the Apache License, Version 2.0 (the
-rem "License"); you may not use this file except in compliance
-rem with the License. You may obtain a copy of the License at
-rem
-rem http://www.apache.org/licenses/LICENSE-2.0
-rem
-rem Unless required by applicable law or agreed to in writing,
-rem software distributed under the License is distributed on an
-rem "AS IS" BASIS, WITHOUT WARRANTIES OR CONDITIONS OF ANY
-rem KIND, either express or implied. See the License for the
-rem specific language governing permissions and limitations
-rem under the License.
-
-setlocal EnableDelayedExpansion
-call "%~dp0"setenv.bat
-
-cd "%XBAYA_HOME%\bin"
-"%JAVA_HOME%\bin\java.exe" %JAVA_OPTS% -classpath "%XBAYA_CLASSPATH%" org.apache.airavata.xbaya.XBaya
%*

http://git-wip-us.apache.org/repos/asf/airavata/blob/0e2c10f5/modules/distribution/xbaya-gui/src/main/resources/bin/xbaya-gui.sh
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diff --git a/modules/distribution/xbaya-gui/src/main/resources/bin/xbaya-gui.sh b/modules/distribution/xbaya-gui/src/main/resources/bin/xbaya-gui.sh
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--- a/modules/distribution/xbaya-gui/src/main/resources/bin/xbaya-gui.sh
+++ /dev/null
@@ -1,22 +0,0 @@
-#!/bin/sh
-
-# Licensed to the Apache Software Foundation (ASF) under one
-# or more contributor license agreements. See the NOTICE file
-# distributed with this work for additional information
-# regarding copyright ownership. The ASF licenses this file
-# to you under the Apache License, Version 2.0 (the
-# "License"); you may not use this file except in compliance
-# with the License. You may obtain a copy of the License at
-# 
-# http://www.apache.org/licenses/LICENSE-2.0
-# 
-# Unless required by applicable law or agreed to in writing,
-# software distributed under the License is distributed on an
-# "AS IS" BASIS, WITHOUT WARRANTIES OR CONDITIONS OF ANY
-# KIND, either express or implied. See the License for the
-# specific language governing permissions and limitations
-# under the License.
-
-. `dirname $0`/setenv.sh
-$JAVA_HOME/bin/java $JAVA_OPTS -classpath "$XBAYA_CLASSPATH" \
-    org.apache.airavata.xbaya.XBaya $* 

http://git-wip-us.apache.org/repos/asf/airavata/blob/0e2c10f5/modules/distribution/xbaya-gui/src/main/resources/jnlp/INSTALL
----------------------------------------------------------------------
diff --git a/modules/distribution/xbaya-gui/src/main/resources/jnlp/INSTALL b/modules/distribution/xbaya-gui/src/main/resources/jnlp/INSTALL
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--- a/modules/distribution/xbaya-gui/src/main/resources/jnlp/INSTALL
+++ /dev/null
@@ -1,48 +0,0 @@
-Installing  Apache Airavata XBaya 0.11
--------------------------------------
-
-Prerequisites
--------------
-Java 1.5 or later
-Maven (tested on v 3.0.2)
-
-Build Apache Airavata XBaya JNLP from Source
---------------------------------------------
-* Unzip/untar the source file or check out from svn.
-* cd to project folder and type
-	$ mvn clean install
-	Note: in order to skip tests use the command
-			$ mvn clean install -Dmaven.test.skip=true
-* The compressed binary distribution is created at <PROJECT DIR>/modules/distribution/xbaya-gui/target/apache-airavata-xbaya-gui-<airavata-version>-jnlp.zip
-
-Installing the JNLP Distribution
---------------------------------
-* Extract the Apache Airavata XBaya JNLP distribution to a web accessible location
-* Update the the xbaya.jnlp file "codebase" with the web access location of the jnlp
-      eg: <jnlp ... codebase="http://example-server.com/airavata/xbaya/" ...>
-           ...
-           ...
-          </jnlp> 
-
-Starting Apache Airavata XBaya JNLP
------------------------------------
-Using the web browser
-	* Using a browser navigate to the url <JNLP-web-access-url>/xbaya.jnlp
-		eg: http://example-server.com/airavata/xbaya/xbaya.jnlp
-	* Following the web start download instructions to run XBaya
-
-Using the commandline
-	* type for following command in the commandline to start the Airavata XBaya
-			$ javaws <JNLP-web-access-url>/xbaya.jnlp
-				eg: $ javaws http://example-server.com/airavata/xbaya/xbaya.jnlp
-
-Running Tests
--------------
-Once the binary is unzipped, instructions to run the tests should be followed from README
-
-Tutorials 
-----------
-The airavata website has instructions for basic tutorials:
-* For basic understanding of how Airavata works - http://airavata.apache.org/documentation/tutorials/airavata-in-5-minutes.html
-* Describing and executing applications using Airavata - http://airavata.apache.org/documentation/tutorials/airavata-in-10-minutes.html
-* Advanced tutorial to provide understanding of how to run sample workflows distributed with
Airavata - http://airavata.apache.org/documentation/tutorials/advanced-workflow-samples.html


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