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From Benjamin Parrish <benjamin.d.parr...@gmail.com>
Subject Re: Installing with Hadoop 2.2.0
Date Tue, 18 Mar 2014 15:04:22 GMT
First off, are there specific ports that need to be opened up for accumulo?
I have hadoop operating without any issues as a 5 node cluster.  Zookeeper
seems to be operating with 2181, 3888, 2888 ports open.

Here is some data from trying to get everything started and getting into
the shell. I discluded the bash portion as Eric suggested because the
mailing list rejected it for length and thinking it was spam.

bin/start-all.sh

[root@hadoop-node-1 zookeeper]# bash -x /usr/local/accumulo/bin/start-all.sh
Starting monitor on hadoop-node-1
WARN : Max files open on hadoop-node-1 is 1024, recommend 65536
Starting tablet servers ....... done
Starting tablet server on hadoop-node-3
Starting tablet server on hadoop-node-5
Starting tablet server on hadoop-node-2
Starting tablet server on hadoop-node-4
WARN : Max files open on hadoop-node-3 is 1024, recommend 65536
WARN : Max files open on hadoop-node-2 is 1024, recommend 65536
WARN : Max files open on hadoop-node-5 is 1024, recommend 65536
WARN : Max files open on hadoop-node-4 is 1024, recommend 65536
Java HotSpot(TM) 64-Bit Server VM warning: You have loaded library
/usr/local/hadoop/lib/native/libhadoop.so.1.0.0 which might have disabled
stack guard. The VM will try to fix the stack guard no
w.
It's highly recommended that you fix the library with 'execstack -c
<libfile>', or link it with '-z noexecstack'.
2014-03-18 10:38:43,143 [util.NativeCodeLoader] WARN : Unable to load
native-hadoop library for your platform... using builtin-java classes where
applicable
2014-03-18 10:38:44,194 [server.Accumulo] INFO : Attempting to talk to
zookeeper
2014-03-18 10:38:44,389 [server.Accumulo] INFO : Zookeeper connected and
initialized, attemping to talk to HDFS
2014-03-18 10:38:44,558 [server.Accumulo] INFO : Connected to HDFS
Starting master on hadoop-node-1
WARN : Max files open on hadoop-node-1 is 1024, recommend 65536
Starting garbage collector on hadoop-node-1
WARN : Max files open on hadoop-node-1 is 1024, recommend 65536
Starting tracer on hadoop-node-1
WARN : Max files open on hadoop-node-1 is 1024, recommend 65536

starting shell as root...

[root@hadoop-node-1 zookeeper]# bash -x /usr/local/accumulo/bin/accumulo
shell -u root
Java HotSpot(TM) 64-Bit Server VM warning: You have loaded library
/usr/local/hadoop/lib/native/libhadoop.so.1.0.0 which might have disabled
stack guard. The VM will try to fix the stack guard no
w.
It's highly recommended that you fix the library with 'execstack -c
<libfile>', or link it with '-z noexecstack'.
2014-03-18 10:38:56,002 [util.NativeCodeLoader] WARN : Unable to load
native-hadoop library for your platform... using builtin-java classes where
applicable
Password: ****
2014-03-18 10:38:58,762 [impl.ServerClient] WARN : There are no tablet
servers: check that zookeeper and accumulo are running.

... this is the point where it sits and acts like it doesn't do anything

-- LOGS -- (most of this looks to be that I cannot connect to anything)

here is the tail -f
$ACCUMULO_HOME/logs/monitor_hadoop-node-1.local.debug.log

2014-03-18 10:42:54,617 [impl.ThriftScanner] DEBUG:  Failed to locate
tablet for table : !0 row : ~err_
2014-03-18 10:42:57,625 [monitor.Monitor] INFO :  Failed to obtain problem
reports
java.lang.RuntimeException:
org.apache.accumulo.core.client.impl.ThriftScanner$ScanTimedOutException
        at
org.apache.accumulo.core.client.impl.ScannerIterator.hasNext(ScannerIterator.java:174)
        at
org.apache.accumulo.server.problems.ProblemReports$3.hasNext(ProblemReports.java:241)
        at
org.apache.accumulo.server.problems.ProblemReports.summarize(ProblemReports.java:299)
        at
org.apache.accumulo.server.monitor.Monitor.fetchData(Monitor.java:399)
        at
org.apache.accumulo.server.monitor.Monitor$1.run(Monitor.java:530)
        at
org.apache.accumulo.core.util.LoggingRunnable.run(LoggingRunnable.java:34)
        at java.lang.Thread.run(Thread.java:744)
Caused by:
org.apache.accumulo.core.client.impl.ThriftScanner$ScanTimedOutException
        at
org.apache.accumulo.core.client.impl.ThriftScanner.scan(ThriftScanner.java:212)
        at
org.apache.accumulo.core.client.impl.ScannerIterator$Reader.run(ScannerIterator.java:82)
        at
org.apache.accumulo.core.client.impl.ScannerIterator.hasNext(ScannerIterator.java:164)
        ... 6 more

here is the tail -f $ACCUMULO+HOME/logs/tracer_hadoop-node-1.local.debug.log

2014-03-18 10:47:44,759 [impl.ServerClient] DEBUG: ClientService request
failed null, retrying ...
org.apache.thrift.transport.TTransportException: Failed to connect to a
server
        at
org.apache.accumulo.core.client.impl.ThriftTransportPool.getAnyTransport(ThriftTransportPool.java:455)
        at
org.apache.accumulo.core.client.impl.ServerClient.getConnection(ServerClient.java:154)
        at
org.apache.accumulo.core.client.impl.ServerClient.getConnection(ServerClient.java:128)
        at
org.apache.accumulo.core.client.impl.ServerClient.getConnection(ServerClient.java:123)
        at
org.apache.accumulo.core.client.impl.ServerClient.executeRaw(ServerClient.java:105)
        at
org.apache.accumulo.core.client.impl.ServerClient.execute(ServerClient.java:71)
        at
org.apache.accumulo.core.client.impl.ConnectorImpl.<init>(ConnectorImpl.java:64)
        at
org.apache.accumulo.server.client.HdfsZooInstance.getConnector(HdfsZooInstance.java:154)
        at
org.apache.accumulo.server.client.HdfsZooInstance.getConnector(HdfsZooInstance.java:149)
        at
org.apache.accumulo.server.trace.TraceServer.<init>(TraceServer.java:200)
        at
org.apache.accumulo.server.trace.TraceServer.main(TraceServer.java:295)
        at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
        at
sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:57)
        at
sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
        at java.lang.reflect.Method.invoke(Method.java:606)
        at org.apache.accumulo.start.Main$1.run(Main.java:103)
        at java.lang.Thread.run(Thread.java:744)


On Tue, Mar 18, 2014 at 9:37 AM, Eric Newton <eric.newton@gmail.com> wrote:

> Can you post the exact error message you are seeing?
>
> Verify that your HADOOP_PREFIX and HADOOP_CONF_DIR are being set properly
> in accumulo-site.xml.
>
> The output of:
>
> bash -x $ACCUMULO_HOME/bin/accumulo shell -u root
>
>
> would also help.
>
> It's going to be something simple.
>
>
> On Tue, Mar 18, 2014 at 9:14 AM, Benjamin Parrish <
> benjamin.d.parrish@gmail.com> wrote:
>
>> Looking to see if there was an answer to this issue or if you could point
>> me in a direction or example that could lead to a solution.
>>
>>
>> On Sun, Mar 16, 2014 at 9:52 PM, Benjamin Parrish <
>> benjamin.d.parrish@gmail.com> wrote:
>>
>>> I am running Accumulo 1.5.1
>>>
>>> <?xml version="1.0" encoding="UTF-8"?>
>>> <!--
>>>   Licensed to the Apache Software Foundation (ASF) under one or more
>>>   contributor license agreements.  See the NOTICE file distributed with
>>>   this work for additional information regarding copyright ownership.
>>>   The ASF licenses this file to You under the Apache License, Version 2.0
>>>   (the "License"); you may not use this file except in compliance with
>>>   the License.  You may obtain a copy of the License at
>>>
>>>       http://www.apache.org/licenses/LICENSE-2.0
>>>
>>>   Unless required by applicable law or agreed to in writing, software
>>>   distributed under the License is distributed on an "AS IS" BASIS,
>>>   WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or
>>> implied.
>>>   See the License for the specific language governing permissions and
>>>   limitations under the License.
>>> -->
>>> <?xml-stylesheet type="text/xsl" href="configuration.xsl"?>
>>>
>>> <configuration>
>>>   <!-- Put your site-specific accumulo configurations here. The
>>> available configuration values along with their defaults are documented in
>>> docs/config.html Unless
>>>     you are simply testing at your workstation, you will most definitely
>>> need to change the three entries below. -->
>>>
>>>   <property>
>>>     <name>instance.zookeeper.host</name>
>>>
>>> <value>hadoop-node-1:2181,hadoop-node-2:2181,hadoop-node-3:2181,hadoop-node-4:2181,hadoop-node-5:2181</value>
>>>     <description>comma separated list of zookeeper servers</description>
>>>   </property>
>>>
>>>   <property>
>>>     <name>logger.dir.walog</name>
>>>     <value>walogs</value>
>>>     <description>The property only needs to be set if upgrading from 1.4
>>> which used to store write-ahead logs on the local
>>>       filesystem. In 1.5 write-ahead logs are stored in DFS.  When 1.5
>>> is started for the first time it will copy any 1.4
>>>       write ahead logs into DFS.  It is possible to specify a
>>> comma-separated list of directories.
>>>     </description>
>>>   </property>
>>>
>>>   <property>
>>>     <name>instance.secret</name>
>>>     <value></value>
>>>     <description>A secret unique to a given instance that all servers
>>> must know in order to communicate with one another.
>>>       Change it before initialization. To
>>>       change it later use ./bin/accumulo
>>> org.apache.accumulo.server.util.ChangeSecret --old [oldpasswd] --new
>>> [newpasswd],
>>>       and then update this file.
>>>     </description>
>>>   </property>
>>>
>>>   <property>
>>>     <name>tserver.memory.maps.max</name>
>>>     <value>1G</value>
>>>   </property>
>>>
>>>   <property>
>>>     <name>tserver.cache.data.size</name>
>>>     <value>128M</value>
>>>   </property>
>>>
>>>   <property>
>>>     <name>tserver.cache.index.size</name>
>>>     <value>128M</value>
>>>   </property>
>>>
>>>   <property>
>>>     <name>trace.token.property.password</name>
>>>     <!-- change this to the root user's password, and/or change the user
>>> below -->
>>>     <value></value>
>>>   </property>
>>>
>>>   <property>
>>>     <name>trace.user</name>
>>>     <value>root</value>
>>>   </property>
>>>
>>>   <property>
>>>     <name>general.classpaths</name>
>>>     <value>
>>>       $HADOOP_PREFIX/share/hadoop/common/.*.jar,
>>>       $HADOOP_PREFIX/share/hadoop/common/lib/.*.jar,
>>>       $HADOOP_PREFIX/share/hadoop/hdfs/.*.jar,
>>>       $HADOOP_PREFIX/share/hadoop/mapreduce/.*.jar,
>>>       $HADOOP_PREFIX/share/hadoop/yarn/.*.jar,
>>>       /usr/lib/hadoop/.*.jar,
>>>       /usr/lib/hadoop/lib/.*.jar,
>>>       /usr/lib/hadoop-hdfs/.*.jar,
>>>       /usr/lib/hadoop-mapreduce/.*.jar,
>>>       /usr/lib/hadoop-yarn/.*.jar,
>>>       $ACCUMULO_HOME/server/target/classes/,
>>>       $ACCUMULO_HOME/lib/accumulo-server.jar,
>>>       $ACCUMULO_HOME/core/target/classes/,
>>>       $ACCUMULO_HOME/lib/accumulo-core.jar,
>>>       $ACCUMULO_HOME/start/target/classes/,
>>>       $ACCUMULO_HOME/lib/accumulo-start.jar,
>>>       $ACCUMULO_HOME/fate/target/classes/,
>>>       $ACCUMULO_HOME/lib/accumulo-fate.jar,
>>>       $ACCUMULO_HOME/proxy/target/classes/,
>>>       $ACCUMULO_HOME/lib/accumulo-proxy.jar,
>>>       $ACCUMULO_HOME/lib/[^.].*.jar,
>>>       $ZOOKEEPER_HOME/zookeeper[^.].*.jar,
>>>       $HADOOP_CONF_DIR,
>>>       $HADOOP_PREFIX/[^.].*.jar,
>>>       $HADOOP_PREFIX/lib/[^.].*.jar,
>>>     </value>
>>>     <description>Classpaths that accumulo checks for updates and class
>>> files.
>>>       When using the Security Manager, please remove the
>>> ".../target/classes/" values.
>>>     </description>
>>>   </property>
>>> </configuration>
>>>
>>>
>>> On Sun, Mar 16, 2014 at 9:06 PM, Josh Elser <josh.elser@gmail.com>wrote:
>>>
>>>> Posting your accumulo-site.xml (filtering out instance.secret and
>>>> trace.password before you post) would also help us figure out what exactly
>>>> is going on.
>>>>
>>>>
>>>> On 3/16/14, 8:41 PM, Mike Drob wrote:
>>>>
>>>>> Which version of Accumulo are you using?
>>>>>
>>>>> You might be missing the hadoop libraries from your classpath. For
>>>>> this,
>>>>> you would check your accumulo-site.xml and find the comment about
>>>>> Hadoop
>>>>> 2 in the file.
>>>>>
>>>>>
>>>>> On Sun, Mar 16, 2014 at 8:28 PM, Benjamin Parrish
>>>>> <benjamin.d.parrish@gmail.com <mailto:benjamin.d.parrish@gmail.com>>
>>>>> wrote:
>>>>>
>>>>>     I have a couple of issues when trying to use Accumulo on Hadoop
>>>>> 2.2.0
>>>>>
>>>>>     1) I start with accumulo init and everything runs through just
>>>>> fine,
>>>>>     but I can find '/accumulo' using 'hadoop fs -ls /'
>>>>>
>>>>>     2) I try to run 'accumulo shell -u root' and it says that that
>>>>>     Hadoop and ZooKeeper are not started, but if I run 'jps' on the
>>>>> each
>>>>>     cluster node it shows all the necessary processes for both in the
>>>>>     JVM.  Is there something I am missing?
>>>>>
>>>>>     --
>>>>>     Benjamin D. Parrish
>>>>>     H: 540-597-7860 <tel:540-597-7860>
>>>>>
>>>>>
>>>>>
>>>
>>>
>>> --
>>> Benjamin D. Parrish
>>> H: 540-597-7860
>>>
>>
>>
>>
>> --
>> Benjamin D. Parrish
>> H: 540-597-7860
>>
>
>


-- 
Benjamin D. Parrish
H: 540-597-7860

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