accumulo-user mailing list archives

Site index · List index
Message view « Date » · « Thread »
Top « Date » · « Thread »
From Benjamin Parrish <benjamin.d.parr...@gmail.com>
Subject Re: Installing with Hadoop 2.2.0
Date Tue, 18 Mar 2014 15:57:24 GMT
So here is the error from the tablet server...

2014-03-18 10:38:43,456 [client.ZooKeeperInstance] ERROR: unable obtain
instance id at /accumulo/instance_id
2014-03-18 10:38:43,456 [tabletserver.TabletServer] ERROR: Uncaught
exception in TabletServer.main, exiting
java.lang.RuntimeException: Accumulo not initialized, there is no instance
id at /accumulo/instance_id
        at
org.apache.accumulo.core.client.ZooKeeperInstance.getInstanceIDFromHdfs(ZooKeeperInstance.java:295)
        at
org.apache.accumulo.server.client.HdfsZooInstance._getInstanceID(HdfsZooInstance.java:126)
        at
org.apache.accumulo.server.client.HdfsZooInstance.getInstanceID(HdfsZooInstance.java:119)
        at
org.apache.accumulo.server.conf.ZooConfiguration.getInstance(ZooConfiguration.java:55)
        at
org.apache.accumulo.server.conf.ServerConfiguration.getZooConfiguration(ServerConfiguration.java:50)
        at
org.apache.accumulo.server.conf.ServerConfiguration.getConfiguration(ServerConfiguration.java:104)
        at org.apache.accumulo.server.Accumulo.init(Accumulo.java:98)
        at
org.apache.accumulo.server.tabletserver.TabletServer.main(TabletServer.java:3249)
        at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
        at
sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:57)
        at
sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
        at java.lang.reflect.Method.invoke(Method.java:606)
        at org.apache.accumulo.start.Main$1.run(Main.java:103)
        at java.lang.Thread.run(Thread.java:744)

Do I need to run bin/accumulo init on every box in the cluster?


On Tue, Mar 18, 2014 at 11:19 AM, Eric Newton <eric.newton@gmail.com> wrote:

> Port numbers (for 1.5+)
>
> 4560 Accumulo monitor (for centralized log display)
> 9997 Tablet Server
> 9999 Master Server
> 12234 Accumulo Tracer
> 50091 Accumulo GC
> 50095 Accumulo HTTP monitor
>
>
> On Tue, Mar 18, 2014 at 11:04 AM, Benjamin Parrish <
> benjamin.d.parrish@gmail.com> wrote:
>
>> First off, are there specific ports that need to be opened up for
>> accumulo? I have hadoop operating without any issues as a 5 node cluster.
>>  Zookeeper seems to be operating with 2181, 3888, 2888 ports open.
>>
>> Here is some data from trying to get everything started and getting into
>> the shell. I discluded the bash portion as Eric suggested because the
>> mailing list rejected it for length and thinking it was spam.
>>
>> bin/start-all.sh
>>
>> [root@hadoop-node-1 zookeeper]# bash -x
>> /usr/local/accumulo/bin/start-all.sh
>> Starting monitor on hadoop-node-1
>> WARN : Max files open on hadoop-node-1 is 1024, recommend 65536
>> Starting tablet servers ....... done
>> Starting tablet server on hadoop-node-3
>> Starting tablet server on hadoop-node-5
>> Starting tablet server on hadoop-node-2
>> Starting tablet server on hadoop-node-4
>> WARN : Max files open on hadoop-node-3 is 1024, recommend 65536
>> WARN : Max files open on hadoop-node-2 is 1024, recommend 65536
>> WARN : Max files open on hadoop-node-5 is 1024, recommend 65536
>> WARN : Max files open on hadoop-node-4 is 1024, recommend 65536
>> Java HotSpot(TM) 64-Bit Server VM warning: You have loaded library
>> /usr/local/hadoop/lib/native/libhadoop.so.1.0.0 which might have disabled
>> stack guard. The VM will try to fix the stack guard no
>> w.
>> It's highly recommended that you fix the library with 'execstack -c
>> <libfile>', or link it with '-z noexecstack'.
>> 2014-03-18 10:38:43,143 [util.NativeCodeLoader] WARN : Unable to load
>> native-hadoop library for your platform... using builtin-java classes where
>> applicable
>> 2014-03-18 10:38:44,194 [server.Accumulo] INFO : Attempting to talk to
>> zookeeper
>> 2014-03-18 10:38:44,389 [server.Accumulo] INFO : Zookeeper connected and
>> initialized, attemping to talk to HDFS
>> 2014-03-18 10:38:44,558 [server.Accumulo] INFO : Connected to HDFS
>> Starting master on hadoop-node-1
>> WARN : Max files open on hadoop-node-1 is 1024, recommend 65536
>> Starting garbage collector on hadoop-node-1
>> WARN : Max files open on hadoop-node-1 is 1024, recommend 65536
>> Starting tracer on hadoop-node-1
>> WARN : Max files open on hadoop-node-1 is 1024, recommend 65536
>>
>> starting shell as root...
>>
>> [root@hadoop-node-1 zookeeper]# bash -x /usr/local/accumulo/bin/accumulo
>> shell -u root
>> Java HotSpot(TM) 64-Bit Server VM warning: You have loaded library
>> /usr/local/hadoop/lib/native/libhadoop.so.1.0.0 which might have disabled
>> stack guard. The VM will try to fix the stack guard no
>> w.
>> It's highly recommended that you fix the library with 'execstack -c
>> <libfile>', or link it with '-z noexecstack'.
>> 2014-03-18 10:38:56,002 [util.NativeCodeLoader] WARN : Unable to load
>> native-hadoop library for your platform... using builtin-java classes where
>> applicable
>> Password: ****
>> 2014-03-18 10:38:58,762 [impl.ServerClient] WARN : There are no tablet
>> servers: check that zookeeper and accumulo are running.
>>
>> ... this is the point where it sits and acts like it doesn't do anything
>>
>> -- LOGS -- (most of this looks to be that I cannot connect to anything)
>>
>> here is the tail -f
>> $ACCUMULO_HOME/logs/monitor_hadoop-node-1.local.debug.log
>>
>> 2014-03-18 10:42:54,617 [impl.ThriftScanner] DEBUG:  Failed to locate
>> tablet for table : !0 row : ~err_
>> 2014-03-18 10:42:57,625 [monitor.Monitor] INFO :  Failed to obtain
>> problem reports
>> java.lang.RuntimeException:
>> org.apache.accumulo.core.client.impl.ThriftScanner$ScanTimedOutException
>>         at
>> org.apache.accumulo.core.client.impl.ScannerIterator.hasNext(ScannerIterator.java:174)
>>         at
>> org.apache.accumulo.server.problems.ProblemReports$3.hasNext(ProblemReports.java:241)
>>         at
>> org.apache.accumulo.server.problems.ProblemReports.summarize(ProblemReports.java:299)
>>         at
>> org.apache.accumulo.server.monitor.Monitor.fetchData(Monitor.java:399)
>>         at
>> org.apache.accumulo.server.monitor.Monitor$1.run(Monitor.java:530)
>>         at
>> org.apache.accumulo.core.util.LoggingRunnable.run(LoggingRunnable.java:34)
>>         at java.lang.Thread.run(Thread.java:744)
>> Caused by:
>> org.apache.accumulo.core.client.impl.ThriftScanner$ScanTimedOutException
>>         at
>> org.apache.accumulo.core.client.impl.ThriftScanner.scan(ThriftScanner.java:212)
>>         at
>> org.apache.accumulo.core.client.impl.ScannerIterator$Reader.run(ScannerIterator.java:82)
>>         at
>> org.apache.accumulo.core.client.impl.ScannerIterator.hasNext(ScannerIterator.java:164)
>>         ... 6 more
>>
>> here is the tail -f
>> $ACCUMULO+HOME/logs/tracer_hadoop-node-1.local.debug.log
>>
>> 2014-03-18 10:47:44,759 [impl.ServerClient] DEBUG: ClientService request
>> failed null, retrying ...
>> org.apache.thrift.transport.TTransportException: Failed to connect to a
>> server
>>         at
>> org.apache.accumulo.core.client.impl.ThriftTransportPool.getAnyTransport(ThriftTransportPool.java:455)
>>         at
>> org.apache.accumulo.core.client.impl.ServerClient.getConnection(ServerClient.java:154)
>>         at
>> org.apache.accumulo.core.client.impl.ServerClient.getConnection(ServerClient.java:128)
>>         at
>> org.apache.accumulo.core.client.impl.ServerClient.getConnection(ServerClient.java:123)
>>         at
>> org.apache.accumulo.core.client.impl.ServerClient.executeRaw(ServerClient.java:105)
>>         at
>> org.apache.accumulo.core.client.impl.ServerClient.execute(ServerClient.java:71)
>>         at
>> org.apache.accumulo.core.client.impl.ConnectorImpl.<init>(ConnectorImpl.java:64)
>>         at
>> org.apache.accumulo.server.client.HdfsZooInstance.getConnector(HdfsZooInstance.java:154)
>>         at
>> org.apache.accumulo.server.client.HdfsZooInstance.getConnector(HdfsZooInstance.java:149)
>>          at
>> org.apache.accumulo.server.trace.TraceServer.<init>(TraceServer.java:200)
>>         at
>> org.apache.accumulo.server.trace.TraceServer.main(TraceServer.java:295)
>>         at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
>>         at
>> sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:57)
>>         at
>> sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
>>         at java.lang.reflect.Method.invoke(Method.java:606)
>>         at org.apache.accumulo.start.Main$1.run(Main.java:103)
>>         at java.lang.Thread.run(Thread.java:744)
>>
>>
>> On Tue, Mar 18, 2014 at 9:37 AM, Eric Newton <eric.newton@gmail.com>wrote:
>>
>>> Can you post the exact error message you are seeing?
>>>
>>> Verify that your HADOOP_PREFIX and HADOOP_CONF_DIR are being set
>>> properly in accumulo-site.xml.
>>>
>>> The output of:
>>>
>>> bash -x $ACCUMULO_HOME/bin/accumulo shell -u root
>>>
>>>
>>> would also help.
>>>
>>> It's going to be something simple.
>>>
>>>
>>> On Tue, Mar 18, 2014 at 9:14 AM, Benjamin Parrish <
>>> benjamin.d.parrish@gmail.com> wrote:
>>>
>>>> Looking to see if there was an answer to this issue or if you could
>>>> point me in a direction or example that could lead to a solution.
>>>>
>>>>
>>>> On Sun, Mar 16, 2014 at 9:52 PM, Benjamin Parrish <
>>>> benjamin.d.parrish@gmail.com> wrote:
>>>>
>>>>> I am running Accumulo 1.5.1
>>>>>
>>>>> <?xml version="1.0" encoding="UTF-8"?>
>>>>> <!--
>>>>>   Licensed to the Apache Software Foundation (ASF) under one or more
>>>>>   contributor license agreements.  See the NOTICE file distributed with
>>>>>   this work for additional information regarding copyright ownership.
>>>>>   The ASF licenses this file to You under the Apache License, Version
>>>>> 2.0
>>>>>   (the "License"); you may not use this file except in compliance with
>>>>>   the License.  You may obtain a copy of the License at
>>>>>
>>>>>       http://www.apache.org/licenses/LICENSE-2.0
>>>>>
>>>>>   Unless required by applicable law or agreed to in writing, software
>>>>>   distributed under the License is distributed on an "AS IS" BASIS,
>>>>>   WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or
>>>>> implied.
>>>>>   See the License for the specific language governing permissions and
>>>>>   limitations under the License.
>>>>> -->
>>>>> <?xml-stylesheet type="text/xsl" href="configuration.xsl"?>
>>>>>
>>>>> <configuration>
>>>>>   <!-- Put your site-specific accumulo configurations here. The
>>>>> available configuration values along with their defaults are documented
in
>>>>> docs/config.html Unless
>>>>>     you are simply testing at your workstation, you will most
>>>>> definitely need to change the three entries below. -->
>>>>>
>>>>>   <property>
>>>>>     <name>instance.zookeeper.host</name>
>>>>>
>>>>> <value>hadoop-node-1:2181,hadoop-node-2:2181,hadoop-node-3:2181,hadoop-node-4:2181,hadoop-node-5:2181</value>
>>>>>     <description>comma separated list of zookeeper
>>>>> servers</description>
>>>>>   </property>
>>>>>
>>>>>   <property>
>>>>>     <name>logger.dir.walog</name>
>>>>>     <value>walogs</value>
>>>>>     <description>The property only needs to be set if upgrading
from
>>>>> 1.4 which used to store write-ahead logs on the local
>>>>>       filesystem. In 1.5 write-ahead logs are stored in DFS.  When 1.5
>>>>> is started for the first time it will copy any 1.4
>>>>>       write ahead logs into DFS.  It is possible to specify a
>>>>> comma-separated list of directories.
>>>>>     </description>
>>>>>   </property>
>>>>>
>>>>>   <property>
>>>>>     <name>instance.secret</name>
>>>>>     <value></value>
>>>>>     <description>A secret unique to a given instance that all servers
>>>>> must know in order to communicate with one another.
>>>>>       Change it before initialization. To
>>>>>       change it later use ./bin/accumulo
>>>>> org.apache.accumulo.server.util.ChangeSecret --old [oldpasswd] --new
>>>>> [newpasswd],
>>>>>       and then update this file.
>>>>>     </description>
>>>>>   </property>
>>>>>
>>>>>   <property>
>>>>>     <name>tserver.memory.maps.max</name>
>>>>>     <value>1G</value>
>>>>>   </property>
>>>>>
>>>>>   <property>
>>>>>     <name>tserver.cache.data.size</name>
>>>>>     <value>128M</value>
>>>>>   </property>
>>>>>
>>>>>   <property>
>>>>>     <name>tserver.cache.index.size</name>
>>>>>     <value>128M</value>
>>>>>   </property>
>>>>>
>>>>>   <property>
>>>>>     <name>trace.token.property.password</name>
>>>>>     <!-- change this to the root user's password, and/or change the
>>>>> user below -->
>>>>>     <value></value>
>>>>>   </property>
>>>>>
>>>>>   <property>
>>>>>     <name>trace.user</name>
>>>>>     <value>root</value>
>>>>>   </property>
>>>>>
>>>>>   <property>
>>>>>     <name>general.classpaths</name>
>>>>>     <value>
>>>>>       $HADOOP_PREFIX/share/hadoop/common/.*.jar,
>>>>>       $HADOOP_PREFIX/share/hadoop/common/lib/.*.jar,
>>>>>       $HADOOP_PREFIX/share/hadoop/hdfs/.*.jar,
>>>>>       $HADOOP_PREFIX/share/hadoop/mapreduce/.*.jar,
>>>>>       $HADOOP_PREFIX/share/hadoop/yarn/.*.jar,
>>>>>       /usr/lib/hadoop/.*.jar,
>>>>>       /usr/lib/hadoop/lib/.*.jar,
>>>>>       /usr/lib/hadoop-hdfs/.*.jar,
>>>>>       /usr/lib/hadoop-mapreduce/.*.jar,
>>>>>       /usr/lib/hadoop-yarn/.*.jar,
>>>>>       $ACCUMULO_HOME/server/target/classes/,
>>>>>       $ACCUMULO_HOME/lib/accumulo-server.jar,
>>>>>       $ACCUMULO_HOME/core/target/classes/,
>>>>>       $ACCUMULO_HOME/lib/accumulo-core.jar,
>>>>>       $ACCUMULO_HOME/start/target/classes/,
>>>>>       $ACCUMULO_HOME/lib/accumulo-start.jar,
>>>>>       $ACCUMULO_HOME/fate/target/classes/,
>>>>>       $ACCUMULO_HOME/lib/accumulo-fate.jar,
>>>>>       $ACCUMULO_HOME/proxy/target/classes/,
>>>>>       $ACCUMULO_HOME/lib/accumulo-proxy.jar,
>>>>>       $ACCUMULO_HOME/lib/[^.].*.jar,
>>>>>       $ZOOKEEPER_HOME/zookeeper[^.].*.jar,
>>>>>       $HADOOP_CONF_DIR,
>>>>>       $HADOOP_PREFIX/[^.].*.jar,
>>>>>       $HADOOP_PREFIX/lib/[^.].*.jar,
>>>>>     </value>
>>>>>     <description>Classpaths that accumulo checks for updates and
class
>>>>> files.
>>>>>       When using the Security Manager, please remove the
>>>>> ".../target/classes/" values.
>>>>>     </description>
>>>>>   </property>
>>>>> </configuration>
>>>>>
>>>>>
>>>>> On Sun, Mar 16, 2014 at 9:06 PM, Josh Elser <josh.elser@gmail.com>wrote:
>>>>>
>>>>>> Posting your accumulo-site.xml (filtering out instance.secret and
>>>>>> trace.password before you post) would also help us figure out what
exactly
>>>>>> is going on.
>>>>>>
>>>>>>
>>>>>> On 3/16/14, 8:41 PM, Mike Drob wrote:
>>>>>>
>>>>>>> Which version of Accumulo are you using?
>>>>>>>
>>>>>>> You might be missing the hadoop libraries from your classpath.
For
>>>>>>> this,
>>>>>>> you would check your accumulo-site.xml and find the comment about
>>>>>>> Hadoop
>>>>>>> 2 in the file.
>>>>>>>
>>>>>>>
>>>>>>> On Sun, Mar 16, 2014 at 8:28 PM, Benjamin Parrish
>>>>>>> <benjamin.d.parrish@gmail.com <mailto:benjamin.d.parrish@gmail.com>>
>>>>>>> wrote:
>>>>>>>
>>>>>>>     I have a couple of issues when trying to use Accumulo on
Hadoop
>>>>>>> 2.2.0
>>>>>>>
>>>>>>>     1) I start with accumulo init and everything runs through
just
>>>>>>> fine,
>>>>>>>     but I can find '/accumulo' using 'hadoop fs -ls /'
>>>>>>>
>>>>>>>     2) I try to run 'accumulo shell -u root' and it says that
that
>>>>>>>     Hadoop and ZooKeeper are not started, but if I run 'jps'
on the
>>>>>>> each
>>>>>>>     cluster node it shows all the necessary processes for both
in the
>>>>>>>     JVM.  Is there something I am missing?
>>>>>>>
>>>>>>>     --
>>>>>>>     Benjamin D. Parrish
>>>>>>>     H: 540-597-7860 <tel:540-597-7860>
>>>>>>>
>>>>>>>
>>>>>>>
>>>>>
>>>>>
>>>>> --
>>>>> Benjamin D. Parrish
>>>>> H: 540-597-7860
>>>>>
>>>>
>>>>
>>>>
>>>> --
>>>> Benjamin D. Parrish
>>>> H: 540-597-7860
>>>>
>>>
>>>
>>
>>
>> --
>> Benjamin D. Parrish
>> H: 540-597-7860
>>
>
>


-- 
Benjamin D. Parrish
H: 540-597-7860

Mime
View raw message